Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
HYDIN	54768	genome.wustl.edu	36	16	69431528	69431528	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	16	69431528	69431528	G	A	SNP	HYDIN	NM_032821	human	genbank	54_36p	-1	validated	missense	c.12980	p.A4327V	1.000	superfamily_PapD-like	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NRAS	4893	genome.wustl.edu	36	1	115060267	115060267	+	Missense_Mutation	SNP	C	C	T	rs121434595		TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	115060267	115060267	C	T	SNP	NRAS	NM_002524	human	genbank	54_36p	-1	reviewed	missense	c.38	p.G13D	1.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LOC100128342	100128342	genome.wustl.edu	36	3	15479581	15479581	+	Silent	SNP	C	C	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	3	15479581	15479581	C	A	SNP	LOC100128342	XM_001721613	human	genbank	54_36p	-1	model	silent	c.75	p.V25	0.000	NULL	NULL	-	no_errors
FAM57B	83723	genome.wustl.edu	36	16	29944637	29944637	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	16	29944637	29944637	G	A	SNP	FAM57B	NM_031478	human	genbank	54_36p	-1	validated	nonsense	c.451	p.R151*	1.000	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	-	no_errors
DNMT3A	1788	genome.wustl.edu	36	2	25321667	25321667	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	2	25321667	25321667	C	A	SNP	DNMT3A	NM_022552	human	genbank	54_36p	-1	reviewed	nonsense	c.1513	p.E505*	1.000	NULL	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors
MUC16	94025	genome.wustl.edu	36	19	8908027	8908027	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	19	8908027	8908027	G	A	SNP	MUC16	NM_024690	human	genbank	54_36p	-1	validated	missense	c.34604	p.T11535M	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
NPM1	4869	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	-	-			-	-	Verified	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	170770152	170770153	0	TCTG	INS	NPM1	NM_002520	human	genbank	54_36p	1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	Nucleoplasmin;HMMPfam_Nucleoplasmin;Nucleoplasmin-like	-	NA
GRIP1	23426	genome.wustl.edu	36	12	65124752	65124752	+	Silent	SNP	G	G	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	12	65124752	65124752	G	A	SNP	GRIP1	NM_021150	human	genbank	54_36p	-1	validated	silent	c.1410	p.D470	1.000	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
LRRC2	79442	genome.wustl.edu	36	3	46549403	46549403	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	3	46549403	46549403	C	T	SNP	LRRC2	NM_024512	human	genbank	54_36p	-1	validated	missense	c.491	p.G164D	0.998	superfamily_SSF52058	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
OR8A1	390275	genome.wustl.edu	36	11	123945508	123945508	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2967-03A-01D-0739-09	TCGA-AB-2967-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	11	123945508	123945508	G	A	SNP	OR8A1	NM_001005194	human	genbank	54_36p	+1	provisional	missense	c.334	p.A112T	0.008	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
