Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
IDH2	3418	genome.wustl.edu	36	15	88432938	88432938	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09					C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	15	88432938	88432938	C	T	SNP	IDH2	NM_002168.2	human	genbank	54_36p	-1	reviewed	missense	c.419	p.R140Q	1.000	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh,PatternScan_IDH_IMDH	-	no_errors
NPM1	4869	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09	-	-			-	-	Verified	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	170770152	170770153	0	TCTG	INS	NPM1	NM_002520	human	genbank	54_36p	1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	Nucleoplasmin;HMMPfam_Nucleoplasmin;Nucleoplasmin-like	-	NA
ENSG00000169164	0	genome.wustl.edu	36	X	55700094	55700094	+	Silent	SNP	G	G	A			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09					G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	X	55700094	55700094	G	A	SNP	ENSG00000169164	ENST00000347911	human	ensembl	54_36p	-1	known	silent	c.28	p.L10	0.000	HMMPfam_GAGE	HMMPfam_GAGE	-	no_start_codon:no_stop_codon
RET	5979	genome.wustl.edu	36	10	42920506	42920506	+	Silent	SNP	G	G	T			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09					G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	10	42920506	42920506	G	T	SNP	RET	NM_020975.4	human	genbank	54_36p	+1	reviewed	silent	c.726	p.V242	0.006	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
ACVR2B	93	genome.wustl.edu	36	3	38494675	38494675	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09					C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	3	38494675	38494675	C	T	SNP	ACVR2B	NM_001106.3	human	genbank	54_36p	+1	reviewed	missense	c.410	p.T137M	1.000	NULL	superfamily_Snake toxin-like,HMMPfam_Activin_recp,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST	-	no_errors
COL19A1	1310	genome.wustl.edu	36	6	70909420	70909420	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2973-03A-01D-0739-09	TCGA-AB-2973-11A-01D-0739-09					C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	6	70909420	70909420	C	T	SNP	COL19A1	NM_001858.4	human	genbank	54_36p	+1	reviewed	missense	c.1613	p.P538L	1.000	HMMPfam_Collagen	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Collagen	-	no_errors
