Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
WNK4	65266	genome.wustl.edu	36	17	38193916	38193916	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	17	38193916	38193916	C	T	SNP	WNK4	NM_032387	human	genbank	54_36p	+1	validated	missense	c.2005	p.R669W	0.975	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
VIP	7432	genome.wustl.edu	36	6	153118194	153118194	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	6	153118194	153118194	C	T	SNP	VIP	NM_003381	human	genbank	54_36p	+1	reviewed	missense	c.328	p.R110C	0.998	NULL	PatternScan_GLUCAGON,HMMSmart_SM00070,HMMPfam_Hormone_2	-	no_errors
ST6GALNAC3	256435	genome.wustl.edu	36	1	76650507	76650507	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	76650507	76650507	C	T	SNP	ST6GALNAC3	NM_152996	human	genbank	54_36p	+1	provisional	missense	c.440	p.A147V	0.973	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
NPM1	4869	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	-	-			-	-	Verified	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	170770152	170770153	0	TCTG	INS	NPM1	NM_002520	human	genbank	54_36p	1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	Nucleoplasmin;HMMPfam_Nucleoplasmin;Nucleoplasmin-like	-	NA
NONO	4841	genome.wustl.edu	36	X	70428422	70428422	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	X	70428422	70428422	C	A	SNP	NONO	NM_007363	human	genbank	54_36p	+1	reviewed	missense	c.223	p.R75S	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMPfam_NOPS	-	no_errors
IDH1	3417	genome.wustl.edu	36	2	208821358	208821358	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	2	208821358	208821358	G	T	SNP	IDH1	NM_005896	human	genbank	54_36p	-1	reviewed	missense	c.394	p.R132S	1.000	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors
GTF3A	2971	genome.wustl.edu	36	13	26906981	26906981	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	13	26906981	26906981	G	A	SNP	GTF3A	ENST00000381140	human	ensembl	54_36p	+1	known	missense	c.854	p.R285H	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
TRPM4	54795	genome.wustl.edu	36	19	54397072	54397072	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	19	54397072	54397072	G	A	SNP	TRPM4	NM_017636	human	genbank	54_36p	+1	provisional	missense	c.2993	p.G998D	0.061	HMMPfam_Ion_trans	HMMPfam_Ion_trans	-	no_errors
OR1C1	26188	genome.wustl.edu	36	1	245987765	245987765	+	Silent	SNP	G	G	A			TCGA-AB-3011-03A-01D-0739-09	TCGA-AB-3011-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	245987765	245987765	G	A	SNP	OR1C1	NM_012353	human	genbank	54_36p	-1	validated	silent	c.567	p.C189	0.993	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
