Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ACSM2B	348158	genome.wustl.edu	37	16	20548586	20548586	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20548586	20548586	C	T	SNP	ACSM2B	NM_001105069	human	genbank	57_37b	-1	validated	silent	c.1728	p.A576	0.000	NULL	superfamily_Acetyl-CoA synthetase-like,HMMPfam_AMP-binding,PatternScan_AMP_BINDING	-	no_errors
ACTR3B	57180	genome.wustl.edu	37	7	152513624	152513624	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	152513624	152513624	C	T	SNP	ACTR3B	NM_020445	human	genbank	57_37b	+1	validated	missense	c.491	p.T164M	0.990	HMMPfam_Actin,superfamily_Actin-like ATPase domain,HMMSmart_SM00268	HMMPfam_Actin,superfamily_Actin-like ATPase domain,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE	-	no_errors
ADCK1	57143	genome.wustl.edu	37	14	78325602	78325602	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	78325602	78325602	C	T	SNP	ADCK1	NM_020421	human	genbank	57_37b	+1	validated	nonsense	c.403	p.R135*	0.998	superfamily_Kinase_like	superfamily_Kinase_like,HMMPfam_ABC1	-	no_errors
AGBL1	123624	genome.wustl.edu	37	15	86838639	86838639	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	86838639	86838639	C	T	SNP	AGBL1	NM_152336	human	genbank	57_37b	+1	validated	nonsense	c.2236	p.R746*	1.000	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14	superfamily_ARM repeat,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14	-	no_errors
API5	8539	genome.wustl.edu	37	11	43340343	43340343	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	43340343	43340343	G	C	SNP	API5	NM_001142930	human	genbank	57_37b	+1	validated	missense	c.223	p.D75H	1.000	HMMPfam_API5,superfamily_ARM-type_fold	HMMPfam_API5,superfamily_ARM-type_fold	-	no_errors
ASAP3	55616	genome.wustl.edu	37	1	23759634	23759634	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23759634	23759634	C	A	SNP	ASAP3	NM_017707	human	genbank	57_37b	-1	reviewed	silent	c.2259	p.P753	0.860	NULL	PatternScan_AIPM_HOMOCIT_SYNTH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
ATP11C	286410	genome.wustl.edu	37	X	138901509	138901509	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	138901509	138901509	G	A	SNP	ATP11C	NM_173694	human	genbank	57_37b	-1	validated	silent	c.234	p.I78	1.000	NULL	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
C2orf14	0	genome.wustl.edu	37	2	131439076	131439076	+	RNA	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	131439076	131439076	C	T	SNP	C2orf14	NR_023391	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.178	-	-	-	no_errors
C7orf16	10842	genome.wustl.edu	37	7	31735126	31735126	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	31735126	31735126	G	C	SNP	C7orf16	NM_006658	human	genbank	57_37b	+1	validated	missense	c.126	p.K42N	1.000	NULL	NULL	-	no_errors
CACNA1F	778	genome.wustl.edu	37	X	49071852	49071852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49071852	49071852	G	A	SNP	CACNA1F	NM_005183	human	genbank	57_37b	-1	reviewed	missense	c.3421	p.R1141C	1.000	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
CASC5	57082	genome.wustl.edu	37	15	40947129	40947129	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40947129	40947129	G	C	SNP	CASC5	NM_170589	human	genbank	57_37b	+1	validated	missense	c.6516	p.K2172N	0.033	NULL	NULL	-	no_errors
CCDC33	80125	genome.wustl.edu	37	15	74588246	74588246	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74588246	74588246	A	G	SNP	CCDC33	NM_025055	human	genbank	57_37b	+1	validated	missense	c.1247	p.E416G	0.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2	-	no_errors
CDC37	11140	genome.wustl.edu	37	19	10514100	10514100	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10514100	10514100	G	A	SNP	CDC37	NM_007065	human	genbank	57_37b	-1	reviewed	missense	c.56	p.T19M	1.000	HMMPfam_CDC37_N	HMMPfam_CDC37_N,HMMPfam_CDC37_M,superfamily_Hsp90 co-chaperone CDC37,HMMPfam_CDC37_C	-	no_errors
CEP110	11064	genome.wustl.edu	37	9	123935965	123935965	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	123935965	123935965	C	T	SNP	CEP110	NM_007018	human	genbank	57_37b	+1	reviewed	missense	c.6697	p.R2233C	1.000	NULL	superfamily_L domain-like,HMMSmart_SM00365,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_Prefoldin,superfamily_tRNA-binding arm	-	no_errors
CNN3	1266	genome.wustl.edu	37	1	95368739	95368739	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	95368739	95368739	A	C	SNP	CNN3	NM_001839	human	genbank	57_37b	-1	validated	missense	c.185	p.I62R	1.000	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,PatternScan_CALPONIN_1,HMMPfam_Calponin	-	no_errors
CNTNAP5	129684	genome.wustl.edu	37	2	125555837	125555837	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	125555837	125555837	C	A	SNP	CNTNAP5	NM_130773	human	genbank	57_37b	+1	reviewed	missense	c.3154	p.L1052I	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FA58C_1,PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C	-	no_errors
CPAMD8	27151	genome.wustl.edu	37	19	17039789	17039789	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17039789	17039789	C	G	SNP	CPAMD8	NM_015692	human	genbank	57_37b	-1	validated	missense	c.3248	p.R1083T	1.000	NULL	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep,superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1	-	no_errors
CSMD1	64478	genome.wustl.edu	37	8	3855451	3855451	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3855451	3855451	G	A	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	silent	c.792	p.I264	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
DCC	1630	genome.wustl.edu	37	18	50450136	50450136	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	50450136	50450136	G	T	SNP	DCC	NM_005215	human	genbank	57_37b	+1	reviewed	nonsense	c.757	p.E253*	1.000	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_Neogenin_C	-	no_errors
DKK3	27122	genome.wustl.edu	37	11	12020297	12020297	+	Silent	SNP	G	C	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	12020297	12020297	G	C	SNP	DKK3	NM_001018057	human	genbank	57_37b	-1	reviewed	silent	c.381	p.V127	0.840	NULL	HMMPfam_Dickkopf_N	-	no_errors
DNAH6	0	genome.wustl.edu	37	2	84949763	84949763	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	84949763	84949763	C	A	SNP	DNAH6	NM_001370	human	genbank	57_37b	+1	validated	silent	c.9807	p.A3269	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DPF1	8193	genome.wustl.edu	37	19	38708105	38708105	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38708105	38708105	T	G	SNP	DPF1	NM_001135155	human	genbank	57_37b	-1	validated	missense	c.803	p.H268P	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
ENOX1	55068	genome.wustl.edu	37	13	43930276	43930276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	43930276	43930276	C	T	SNP	ENOX1	NM_001127615	human	genbank	57_37b	-1	validated	missense	c.602	p.R201Q	1.000	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
GMFG	9535	genome.wustl.edu	37	19	39826138	39826138	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39826138	39826138	C	G	SNP	GMFG	NM_004877	human	genbank	57_37b	-1	validated	missense	c.37	p.E13Q	1.000	superfamily_Actin depolymerizing proteins,HMMPfam_Cofilin_ADF,HMMSmart_SM00102	superfamily_Actin depolymerizing proteins,HMMPfam_Cofilin_ADF,HMMSmart_SM00102	-	no_errors
GREB1L	80000	genome.wustl.edu	37	18	19020328	19020328	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	19020328	19020328	G	A	SNP	GREB1L	NM_001142966	human	genbank	57_37b	+1	provisional	missense	c.1048	p.V350I	1.000	NULL	PatternScan_ASP_PROTEASE	-	no_errors
HIST1H4G	8369	genome.wustl.edu	37	6	26247074	26247074	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26247074	26247074	G	C	SNP	HIST1H4G	NM_003547	human	genbank	57_37b	-1	reviewed	silent	c.132	p.V44	0.999	superfamily_Histone-fold,HMMSmart_H4,HMMPfam_Histone	PatternScan_HISTONE_H4,superfamily_Histone-fold,HMMSmart_H4,HMMPfam_Histone	-	no_errors
IFNAR1	3454	genome.wustl.edu	37	21	34715607	34715607	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	34715607	34715607	C	T	SNP	IFNAR1	NM_000629	human	genbank	57_37b	+1	reviewed	missense	c.410	p.A137V	1.000	superfamily_Fibronectin type III	superfamily_Fibronectin type III	-	no_errors
IGF2BP1	10642	genome.wustl.edu	37	17	47117353	47117353	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47117353	47117353	G	A	SNP	IGF2BP1	NM_006546	human	genbank	57_37b	+1	reviewed	missense	c.718	p.A240T	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors
KCTD21	283219	genome.wustl.edu	37	11	77884970	77884970	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	77884970	77884970	C	A	SNP	KCTD21	NM_001029859	human	genbank	57_37b	-1	provisional	missense	c.631	p.V211L	1.000	NULL	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra	-	no_errors
KIAA0947	23379	genome.wustl.edu	37	5	5463316	5463316	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	5463316	5463316	T	G	SNP	KIAA0947	NM_015325	human	genbank	57_37b	+1	validated	missense	c.3869	p.V1290G	0.000	NULL	NULL	-	no_errors
KIF27	55582	genome.wustl.edu	37	9	86503485	86503485	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	86503485	86503485	G	C	SNP	KIF27	NM_017576	human	genbank	57_37b	-1	provisional	missense	c.2002	p.Q668E	0.993	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors
LOC120824	120824	genome.wustl.edu	37	11	49000623	49000623	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49000623	49000623	C	G	SNP	LOC120824	XM_062300	human	genbank	57_37b	-1	model	missense	c.539	p.R180T	0.177	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY	-	no_errors
LOC344065	344065	genome.wustl.edu	37	2	95880530	95880530	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	95880530	95880530	G	C	SNP	LOC344065	XM_292895	human	genbank	57_37b	+1	model	missense	c.796	p.E266Q	0.137	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LRP1	4035	genome.wustl.edu	37	12	57567573	57567573	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57567573	57567573	C	A	SNP	LRP1	NM_002332	human	genbank	57_37b	+1	reviewed	silent	c.3357	p.I1119	1.000	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors
LZTR1	8216	genome.wustl.edu	37	22	21342406	21342406	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21342406	21342406	C	T	SNP	LZTR1	NM_006767	human	genbank	57_37b	+1	reviewed	missense	c.508	p.R170W	0.814	superfamily_Galactose oxidase central domain,HMMSmart_SM00612	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612,HMMPfam_Kelch_2,superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_BTB	-	no_errors
MARK2	2011	genome.wustl.edu	37	11	63669754	63669754	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63669754	63669754	C	T	SNP	MARK2	NM_001039469	human	genbank	57_37b	+1	reviewed	nonsense	c.1087	p.Q363*	1.000	superfamily_Kinase_like	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMPfam_UBA,HMMSmart_UBA,superfamily_SSF103243,HMMPfam_KA1	-	no_errors
MIB1	57534	genome.wustl.edu	37	18	19426998	19426998	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	19426998	19426998	C	T	SNP	MIB1	NM_020774	human	genbank	57_37b	+1	validated	nonsense	c.2305	p.R769*	1.000	superfamily_ANK,HMMPfam_Ank	PatternScan_ZF_RING_1,HMMPfam_MIB_HERC2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	-	no_errors
MRPS7	51081	genome.wustl.edu	37	17	73261843	73261843	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73261843	73261843	G	C	SNP	MRPS7	NM_015971	human	genbank	57_37b	+1	reviewed	missense	c.568	p.E190Q	1.000	superfamily_Ribosomal protein S7,HMMPfam_Ribosomal_S7	superfamily_Ribosomal protein S7,HMMPfam_Ribosomal_S7	-	no_errors
MYO10	4651	genome.wustl.edu	37	5	16671048	16671048	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	16671048	16671048	C	G	SNP	MYO10	NM_012334	human	genbank	57_37b	-1	validated	missense	c.5470	p.E1824Q	0.996	HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	PatternScan_FERM_1,PatternScan_FERM_2,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_MyTH4,HMMPfam_MyTH4,HMMSmart_B41,HMMPfam_RA,superfamily_FERM_3-hlx,HMMPfam_FERM_M	-	no_errors
NMRAL1	57407	genome.wustl.edu	37	16	4511847	4511847	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4511847	4511847	G	C	SNP	NMRAL1	NM_020677	human	genbank	57_37b	-1	provisional	silent	c.834	p.L278	1.000	superfamily_NAD(P)-bd	superfamily_NAD(P)-bd,HMMPfam_NmrA	-	no_errors
PRB2	653247	genome.wustl.edu	37	12	11546633	11546633	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	11546633	11546633	T	A	SNP	PRB2	NM_006248	human	genbank	57_37b	-1	validated	missense	c.379	p.N127Y	0.000	NULL	NULL	-	no_errors
PRICKLE3	4007	genome.wustl.edu	37	X	49032267	49032267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49032267	49032267	C	T	SNP	PRICKLE3	NM_006150	human	genbank	57_37b	-1	reviewed	missense	c.1603	p.D535N	0.142	NULL	HMMPfam_PET,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
PRKD1	5587	genome.wustl.edu	37	14	30107713	30107713	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	30107713	30107713	C	A	SNP	PRKD1	NM_002742	human	genbank	57_37b	-1	validated	nonsense	c.967	p.E323*	1.000	HMMPfam_C1_1	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
R3HDML	140902	genome.wustl.edu	37	20	42966018	42966018	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	42966018	42966018	G	A	SNP	R3HDML	NM_178491	human	genbank	57_37b	+1	provisional	missense	c.221	p.R74Q	1.000	superfamily_SCP-like_extracellular,HMMSmart_SCP,HMMPfam_SCP	PatternScan_CRISP_1,PatternScan_CRISP_2,superfamily_SCP-like_extracellular,HMMSmart_SCP,HMMPfam_SCP	-	no_errors
RARG	5916	genome.wustl.edu	37	12	53607025	53607025	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53607025	53607025	G	A	SNP	RARG	NM_000966	human	genbank	57_37b	-1	validated	missense	c.1021	p.R341C	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00399,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
RELN	5649	genome.wustl.edu	37	7	103126724	103126724	+	Silent	SNP	G	G	A	rs73714404	byCluster;byFrequency;by1000genomes	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	103126724	103126724	G	A	SNP	RELN	NM_005045	human	genbank	57_37b	-1	reviewed	silent	c.9903	p.Y3301	0.913	NULL	HMMPfam_Reeler,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Sialidase	-	
RNASEH2A	10535	genome.wustl.edu	37	19	12923995	12923995	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12923995	12923995	G	A	SNP	RNASEH2A	NM_006397	human	genbank	57_37b	+1	reviewed	missense	c.736	p.E246K	1.000	superfamily_Ribonuclease H-like	superfamily_Ribonuclease H-like,HMMPfam_RNase_HII	-	no_errors
RTDR1	27156	genome.wustl.edu	37	22	23401684	23401684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	23401684	23401684	G	A	SNP	RTDR1	NM_014433	human	genbank	57_37b	-1	reviewed	missense	c.1003	p.R335W	0.004	NULL	superfamily_ARM-type_fold,HMMPfam_Arm	-	no_errors
SF3B1	23451	genome.wustl.edu	37	2	198267459	198267459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	198267459	198267459	G	A	SNP	SF3B1	NM_012433	human	genbank	57_37b	-1	reviewed	missense	c.1898	p.A633V	1.000	superfamily_ARM repeat	HMMPfam_SF3b1,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
SLC25A18	83733	genome.wustl.edu	37	22	18069986	18069986	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	18069986	18069986	C	G	SNP	SLC25A18	NM_031481	human	genbank	57_37b	+1	provisional	missense	c.494	p.S165C	0.996	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC8A3	6547	genome.wustl.edu	37	14	70515731	70515731	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	70515731	70515731	C	A	SNP	SLC8A3	NM_183002	human	genbank	57_37b	-1	reviewed	silent	c.2160	p.G720	0.151	NULL	HMMPfam_Na_Ca_ex,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
SMARCA2	6595	genome.wustl.edu	37	9	2076304	2076304	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	2076304	2076304	G	C	SNP	SMARCA2	NM_003070	human	genbank	57_37b	+1	reviewed	missense	c.2011	p.E671Q	0.999	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_QLQ,HMMPfam_HSA,HMMSmart_SM00573,HMMPfam_BRK,HMMSmart_SM00592,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
SMYD3	64754	genome.wustl.edu	37	1	246091315	246091315	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	246091315	246091315	C	A	SNP	SMYD3	NM_022743	human	genbank	57_37b	-1	validated	missense	c.443	p.S148I	1.000	superfamily_SSF82199,HMMSmart_SET,HMMPfam_SET	HMMPfam_zf-MYND,superfamily_SSF82199,HMMSmart_SET,HMMPfam_SET	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578446	7578447	+	Frame_Shift_Ins	INS	-	-	GGCCA	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578446	7578447	-	GGCCA	INS	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.484_483	p.I161fs	1.000:1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
ZNF425	155054	genome.wustl.edu	37	7	148801933	148801933	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0I2-01A-11W-A050-09	TCGA-B6-A0I2-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	148801933	148801933	C	G	SNP	ZNF425	NM_001001661	human	genbank	57_37b	-1	provisional	missense	c.1030	p.G344R	0.001	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
