Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
Unknown	0	broad.mit.edu	37	1	700532	700532	+	RNA	SNP	T	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr1:700532T>A	uc001abo.2	-	7		c.1022A>T								Homo sapiens cDNA clone IMAGE:4129277, partial cds.																		aaaaaaaaaaTTCCTTTGGGA	0.214000													3	24					0	0	0.014758	0	0
ARID1A	8289	broad.mit.edu	37	1	27056192	27056192	+	Silent	SNP	C	T	T	rs61749356	byFrequency	TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr1:27056192C>T	uc001bmv.1	+	2	1561	c.1188C>T	c.(1186-1188)GGC>GGT	p.G396G	ARID1A_uc001bmt.1_Silent_p.G396G|ARID1A_uc001bmu.1_Silent_p.G396G|ARID1A_uc001bmw.1_Silent_p.G13G	NM_006015	NP_006006	O14497	ARI1A_HUMAN	AT rich interactive domain 1A isoform a	396					androgen receptor signaling pathway|chromatin-mediated maintenance of transcription|estrogen receptor signaling pathway|glucocorticoid receptor signaling pathway|nervous system development|nucleosome mobilization|transcription, DNA-dependent	nBAF complex|npBAF complex|SWI/SNF complex	DNA binding|protein binding			ovary(124)|pancreas(5)|central_nervous_system(3)|endometrium(3)|kidney(3)|skin(2)|upper_aerodigestive_tract(1)|lung(1)	142		all_cancers(24;6.36e-27)|all_epithelial(13;5.93e-24)|Colorectal(325;3.46e-05)|all_lung(284;4.76e-05)|Lung NSC(340;5.83e-05)|Breast(348;9.7e-05)|Renal(390;0.0007)|Ovarian(437;0.00473)|Myeloproliferative disorder(586;0.0255)|all_neural(195;0.0381)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0178)|all cancers(4;2.61e-56)|Epithelial(14;7.53e-55)|OV - Ovarian serous cystadenocarcinoma(117;4.5e-30)|Colorectal(126;2.07e-09)|COAD - Colon adenocarcinoma(152;4.29e-07)|BRCA - Breast invasive adenocarcinoma(304;4.13e-05)|STAD - Stomach adenocarcinoma(196;0.000279)|KIRC - Kidney renal clear cell carcinoma(1967;0.000794)|GBM - Glioblastoma multiforme(114;0.0132)|READ - Rectum adenocarcinoma(331;0.0469)|Lung(427;0.167)|LUSC - Lung squamous cell carcinoma(448;0.242)		AGCCATATGGCGGGACTAACC	0.562000			Mis|N|F|S|D		clear cell ovarian carcinoma|RCC								5	440					0	0	0.014758	0	0
PRG4	10216	broad.mit.edu	37	1	186276229	186276229	+	Missense_Mutation	SNP	A	G	G			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr1:186276229A>G	uc001gru.3	+	7	1429	c.1378A>G	c.(1378-1380)ACA>GCA	p.T460A	PRG4_uc001grt.3_Missense_Mutation_p.T419A|PRG4_uc009wyl.2_Missense_Mutation_p.T367A|PRG4_uc009wym.2_Missense_Mutation_p.T326A|PRG4_uc010poo.1_Intron	NM_005807	NP_005798	Q92954	PRG4_HUMAN	proteoglycan 4 isoform A	460	15.|59 X 8 AA repeats of K-X-P-X-P-T-T-X.				cell proliferation|immune response	extracellular region	polysaccharide binding|protein binding|scavenger receptor activity			skin(1)	1						CAAGGAGCCTACACCCACCAC	0.657000													7	430					0	0	0.047766	0	0
GOLT1A	127845	broad.mit.edu	37	1	204170871	204170871	+	Silent	SNP	C	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr1:204170871C>T	uc001has.1	-	3	372	c.186G>A	c.(184-186)CGG>CGA	p.R62R	GOLT1A_uc001hat.1_Silent_p.R62R	NM_198447	NP_940849	Q6ZVE7	GOT1A_HUMAN	golgi transport 1 homolog A	62	Cytoplasmic (Potential).				protein transport|vesicle-mediated transport	Golgi membrane|integral to membrane					0	all_cancers(21;0.0165)|Breast(84;0.179)|all_epithelial(62;0.242)		KIRC - Kidney renal clear cell carcinoma(13;0.0584)|BRCA - Breast invasive adenocarcinoma(75;0.0833)|Kidney(21;0.0934)|Epithelial(59;0.244)			TGAGTTTGTGCCGTTGGAAGA	0.567000													6	489					0	0	0.021553	0	0
IFT81	28981	broad.mit.edu	37	12	110581204	110581204	+	Missense_Mutation	SNP	G	C	C			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr12:110581204G>C	uc001tqi.2	+	9	929	c.799G>C	c.(799-801)GAG>CAG	p.E267Q	IFT81_uc001tqh.2_Missense_Mutation_p.E267Q|IFT81_uc001tqj.2_RNA|IFT81_uc001tqg.2_Missense_Mutation_p.E267Q	NM_001143779	NP_001137251	Q8WYA0	IFT81_HUMAN	intraflagellar transport 81-like isoform 1	267					cell differentiation|multicellular organismal development|spermatogenesis	intraflagellar transport particle B|microtubule-based flagellum				ovary(1)	1						GAAGAGGCTAGAGGAGGAGAT	0.239000													3	82					0	0	0.004672	0	0
SLC15A4	121260	broad.mit.edu	37	12	129299482	129299482	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr12:129299482G>A	uc001uhu.2	-	2	733	c.680C>T	c.(679-681)GCG>GTG	p.A227V	SLC15A4_uc001uhv.2_RNA|MGC16384_uc001uhw.2_5'Flank	NM_145648	NP_663623	Q8N697	S15A4_HUMAN	solute carrier family 15, member 4	227	Helical; (Potential).				oligopeptide transport|protein transport	integral to membrane|lysosomal membrane	peptide:hydrogen symporter activity				0	all_neural(191;0.101)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;1.69e-06)|Epithelial(86;1.17e-05)|all cancers(50;5.07e-05)		AGTGGGGATCGCATAACCAGT	0.498000													7	632					0	0	0.038147	0	0
COL4A2	1284	broad.mit.edu	37	13	111082272	111082272	+	Missense_Mutation	SNP	C	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr13:111082272C>T	uc001vqx.2	+	8	807	c.518C>T	c.(517-519)GCA>GTA	p.A173V		NM_001846	NP_001837	P08572	CO4A2_HUMAN	alpha 2 type IV collagen preproprotein	173					angiogenesis|axon guidance|extracellular matrix organization|negative regulation of angiogenesis	collagen type IV	extracellular matrix structural constituent|protein binding			skin(3)|central_nervous_system(2)|ovary(1)	6	all_cancers(4;2.21e-12)|all_epithelial(4;2.63e-07)|all_lung(23;5.81e-06)|Lung NSC(43;0.000274)|Colorectal(4;0.00323)|all_neural(89;0.0565)|Lung SC(71;0.0753)|Medulloblastoma(90;0.0922)	Breast(118;0.212)	BRCA - Breast invasive adenocarcinoma(86;0.11)|all cancers(43;0.151)			GAGCCTTATGCACTGCCTAAA	0.423000													5	314					0	0	0.021553	0	0
C14orf21	161424	broad.mit.edu	37	14	24771231	24771231	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr14:24771231G>A	uc001wol.1	+	4	932	c.869G>A	c.(868-870)CGC>CAC	p.R290H	C14orf21_uc001wom.1_5'Flank|DHRS1_uc001woj.1_5'Flank|DHRS1_uc001wok.2_5'Flank	NM_174913	NP_777573	Q86U38	CN021_HUMAN	hypothetical protein LOC161424	290							RNA binding			breast(2)|central_nervous_system(1)|skin(1)	4				GBM - Glioblastoma multiforme(265;0.0185)		GTTTTACACCGCAAACTTCCC	0.488000													6	598					0	0	0.021553	0	0
AKAP6	9472	broad.mit.edu	37	14	33004926	33004926	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr14:33004926G>A	uc001wrq.2	+	3	661	c.491G>A	c.(490-492)CGC>CAC	p.R164H	AKAP6_uc010aml.2_Missense_Mutation_p.R161H	NM_004274	NP_004265	Q13023	AKAP6_HUMAN	A-kinase anchor protein 6	164					protein targeting	calcium channel complex|nuclear membrane|sarcoplasmic reticulum	protein kinase A binding|receptor binding			breast(6)|ovary(5)|lung(4)|skin(3)|large_intestine(2)|pancreas(1)	21	Breast(36;0.0388)|Prostate(35;0.15)		LUAD - Lung adenocarcinoma(48;0.00107)|Lung(238;0.00677)|STAD - Stomach adenocarcinoma(7;0.116)	GBM - Glioblastoma multiforme(265;0.019)		CTGCGGGAGCGCATTCTGCAA	0.522000													5	344					0	0	0.021553	0	0
AHNAK2	113146	broad.mit.edu	37	14	105419188	105419188	+	Missense_Mutation	SNP	A	C	C			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr14:105419188A>C	uc010axc.1	-	7	2720	c.2600T>G	c.(2599-2601)GTG>GGG	p.V867G	AHNAK2_uc001ypx.2_Missense_Mutation_p.V767G	NM_138420	NP_612429	Q8IVF2	AHNK2_HUMAN	AHNAK nucleoprotein 2	867						nucleus				ovary(1)	1		all_cancers(154;0.115)|Melanoma(154;0.155)|all_epithelial(191;0.183)	all cancers(16;0.000479)|OV - Ovarian serous cystadenocarcinoma(23;0.00659)|Epithelial(46;0.0151)|GBM - Glioblastoma multiforme(11;0.116)			GGAGAGGCTCACGTCGGCCTC	0.607000													14	851					0	0	0.105934	0	0
FGF7	2252	broad.mit.edu	37	15	49776572	49776572	+	Silent	SNP	A	C	C			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr15:49776572A>C	uc001zxn.2	+	4	985	c.456A>C	c.(454-456)GCA>GCC	p.A152A	C15orf33_uc001zxl.2_Intron|C15orf33_uc001zxm.2_Intron	NM_002009	NP_002000	P21781	FGF7_HUMAN	fibroblast growth factor 7 precursor	152					actin cytoskeleton reorganization|fibroblast growth factor receptor signaling pathway|insulin receptor signaling pathway|mesenchymal cell proliferation|positive regulation of cell division|positive regulation of epithelial cell proliferation involved in lung morphogenesis|positive regulation of keratinocyte migration|positive regulation of keratinocyte proliferation|positive regulation of peptidyl-tyrosine phosphorylation|protein localization at cell surface|secretion by lung epithelial cell involved in lung growth		chemoattractant activity|growth factor activity				0		all_lung(180;0.00391)		all cancers(107;3.61e-08)|GBM - Glioblastoma multiforme(94;4.06e-05)	Palifermin(DB00039)	ACACATATGCATCAGCTAAAT	0.338000													5	283					0	0	0.014758	0	0
RPL4	6124	broad.mit.edu	37	15	66795072	66795072	+	Missense_Mutation	SNP	C	T	T	rs145448678		TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr15:66795072C>T	uc002apv.2	-	4	355	c.299G>A	c.(298-300)CGA>CAA	p.R100Q	RPL4_uc010bhr.2_Missense_Mutation_p.R6Q|RPL4_uc002apw.2_Missense_Mutation_p.R6Q|RPL4_uc002apx.2_Missense_Mutation_p.R6Q|RPL4_uc010ujq.1_Missense_Mutation_p.R100Q|SNORD18C_uc010bhs.1_5'Flank|SNORD18B_uc002apy.1_5'Flank|ZWILCH_uc010bhu.1_5'Flank|ZWILCH_uc002aqb.2_5'Flank|ZWILCH_uc002aqa.2_5'Flank|ZWILCH_uc010bhv.2_5'Flank	NM_000968	NP_000959	P36578	RL4_HUMAN	ribosomal protein L4	100					endocrine pancreas development|translational elongation|translational termination|viral transcription	cytosolic large ribosomal subunit|nucleolus	protein binding|RNA binding|structural constituent of ribosome				0						TGCAAACATTCGGCCTCCACG	0.438000													5	375					0	0	0.014758	0	0
GOLGA6L5	374650	broad.mit.edu	37	15	85055854	85055854	+	RNA	SNP	T	A	A	rs4039972		TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr15:85055854T>A	uc002bkm.2	-	6		c.706A>T				NR_003246				Homo sapiens cDNA FLJ33459 fis, clone BRAMY2000585.												0						CTGTTCACGTTGCCTCTCCTC	0.542000													3	36					0	0	0.009096	0	0
GLG1	2734	broad.mit.edu	37	16	74640687	74640687	+	Silent	SNP	T	C	C			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr16:74640687T>C	uc002fcy.3	-	1	356	c.306A>G	c.(304-306)GGA>GGG	p.G102G	GLG1_uc002fcx.2_Silent_p.G102G|GLG1_uc002fcw.3_Silent_p.G102G|GLG1_uc002fcz.3_5'UTR	NM_001145667	NP_001139139	Q92896	GSLG1_HUMAN	golgi apparatus protein 1 isoform 3	102	Extracellular (Potential).					Golgi membrane|integral to membrane	receptor binding			ovary(1)|breast(1)	2						CCCCCGCTCCTCCCCGCCGGG	0.527000													11	31					0	0	0.028581	0	0
RGS9	8787	broad.mit.edu	37	17	63206625	63206625	+	Missense_Mutation	SNP	C	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr17:63206625C>T	uc002jfe.2	+	17	1419	c.1309C>T	c.(1309-1311)CGG>TGG	p.R437W	RGS9_uc010dem.2_Missense_Mutation_p.R434W|RGS9_uc002jfd.2_Missense_Mutation_p.R434W|RGS9_uc002jff.2_RNA|RGS9_uc002jfg.2_Missense_Mutation_p.R208W	NM_003835	NP_003826	O75916	RGS9_HUMAN	regulator of G-protein signaling 9 isoform 1	437					intracellular signal transduction|negative regulation of signal transduction|regulation of G-protein coupled receptor protein signaling pathway|visual perception	cytoplasm|heterotrimeric G-protein complex	GTPase activator activity|signal transducer activity			ovary(2)|skin(2)	4						CCCTTTTATGCGGCGTCACCT	0.572000													6	496					0	0	0.021553	0	0
DYRK1B	9149	broad.mit.edu	37	19	40316422	40316422	+	Missense_Mutation	SNP	T	G	G			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr19:40316422T>G	uc002omj.2	-	11	2103	c.1823A>C	c.(1822-1824)GAC>GCC	p.D608A	DYRK1B_uc002omi.2_Missense_Mutation_p.D580A|DYRK1B_uc002omk.2_Missense_Mutation_p.D568A	NM_004714	NP_004705	Q9Y463	DYR1B_HUMAN	dual-specificity tyrosine-(Y)-phosphorylation	608					positive regulation of transcription, DNA-dependent	nucleus	ATP binding|protein binding|protein serine/threonine kinase activity|protein tyrosine kinase activity|transcription coactivator activity			ovary(4)|stomach(1)|central_nervous_system(1)|skin(1)	7	all_cancers(60;5.79e-06)|all_lung(34;5.2e-08)|Lung NSC(34;6.14e-08)|Ovarian(47;0.06)		Epithelial(26;5.74e-25)|OV - Ovarian serous cystadenocarcinoma(5;3.13e-24)|all cancers(26;8.59e-23)			AGTGGCAGGGTCATCAGGAGG	0.716000													7	15					0	0	0.049695	0	0
PRIC285	85441	broad.mit.edu	37	20	62195337	62195337	+	Missense_Mutation	SNP	T	C	C			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr20:62195337T>C	uc002yfm.2	-	9	5730	c.4838A>G	c.(4837-4839)CAG>CGG	p.Q1613R	PRIC285_uc002yfl.1_Missense_Mutation_p.Q1044R	NM_001037335	NP_001032412	Q9BYK8	PR285_HUMAN	PPAR-alpha interacting complex protein 285	1613					cellular lipid metabolic process|regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleoplasm	ATP binding|DNA binding|helicase activity|ribonuclease activity|RNA binding|transcription coactivator activity|zinc ion binding			central_nervous_system(2)	2	all_cancers(38;2.51e-11)|all_epithelial(29;8.27e-13)		Epithelial(9;1.27e-08)|all cancers(9;7.32e-08)|BRCA - Breast invasive adenocarcinoma(10;5.15e-06)			TTCGTAGTCCTGGGTGCGGGC	0.697000													3	54					0	0	0.009096	0	0
GART	2618	broad.mit.edu	37	21	34889852	34889852	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr21:34889852G>A	uc002yrx.2	-	15	1901	c.1766C>T	c.(1765-1767)GCC>GTC	p.A589V	GART_uc002yrz.2_Missense_Mutation_p.A589V|GART_uc010gmd.2_Missense_Mutation_p.A251V|GART_uc002yry.2_Missense_Mutation_p.A589V	NM_000819	NP_000810	P22102	PUR2_HUMAN	phosphoribosylglycinamide formyltransferase,	589	AIRS.				'de novo' IMP biosynthetic process|purine base biosynthetic process	cytosol	ATP binding|metal ion binding|methyltransferase activity|phosphoribosylamine-glycine ligase activity|phosphoribosylformylglycinamidine cyclo-ligase activity|phosphoribosylglycinamide formyltransferase activity|protein binding			ovary(1)	1					Pemetrexed(DB00642)	GGCACCAACGGCAAACCCAGC	0.468000													8	815					0	0	0.058154	0	0
RRP7B	91695	broad.mit.edu	37	22	42971987	42971987	+	RNA	SNP	T	C	C	rs137064	by1000genomes	TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr22:42971987T>C	uc003bcs.2	-	6		c.707A>G			RRP7B_uc003bct.2_RNA					Homo sapiens cDNA FLJ90011 fis, clone HEMBA1000443, highly similar to Gastric cancer antigen Zg14.												0						CAGCTCTTTTTGGCTGCGCTT	0.672000													3	91					0	0	0.009096	0	0
ATR	545	broad.mit.edu	37	3	142281172	142281172	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr3:142281172G>A	uc003eux.3	-	4	1194	c.1072C>T	c.(1072-1074)CCA>TCA	p.P358S		NM_001184	NP_001175	Q13535	ATR_HUMAN	ataxia telangiectasia and Rad3 related protein	358					cell cycle|cellular response to gamma radiation|cellular response to UV|DNA damage checkpoint|DNA repair|DNA replication|multicellular organismal development|negative regulation of DNA replication|peptidyl-serine phosphorylation|positive regulation of DNA damage response, signal transduction by p53 class mediator|protein autophosphorylation|replicative senescence	PML body	ATP binding|DNA binding|MutLalpha complex binding|MutSalpha complex binding|protein serine/threonine kinase activity			lung(5)|skin(5)|breast(4)|ovary(3)|stomach(1)|central_nervous_system(1)|liver(1)	20						TACCCAGCTGGCACAAATTTA	0.413000								Other_conserved_DNA_damage_response_genes					4	235					0	0	0.009096	0	0
MUC4	4585	broad.mit.edu	37	3	195505835	195505835	+	Missense_Mutation	SNP	C	T	T	rs58500707	by1000genomes	TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr3:195505835C>T	uc011bto.1	-	3	12692	c.12232G>A	c.(12232-12234)GCC>ACC	p.A4078T	MUC4_uc003fva.2_5'Flank|MUC4_uc003fvb.2_5'Flank|MUC4_uc003fvc.2_5'Flank|MUC4_uc003fvd.2_5'Flank|MUC4_uc003fve.2_5'Flank|MUC4_uc010hzr.2_5'Flank|MUC4_uc011btf.1_Intron|MUC4_uc011btg.1_Intron|MUC4_uc011bth.1_Intron|MUC4_uc011bti.1_Intron|MUC4_uc011btj.1_Intron|MUC4_uc011btk.1_Intron|MUC4_uc011btl.1_Intron|MUC4_uc011btm.1_Intron|MUC4_uc011btn.1_Intron|MUC4_uc003fvo.2_Intron|MUC4_uc003fvp.2_Intron|MUC4_uc010hzu.1_Intron	NM_018406	NP_060876	Q99102	MUC4_HUMAN	mucin 4 isoform a	Error:AA_residue_mismatch_between_GAF_and_UniProt_prot_seqs_after_alignment					cell-matrix adhesion	integral to plasma membrane|proteinaceous extracellular matrix	ErbB-2 class receptor binding|extracellular matrix constituent, lubricant activity				0	all_cancers(143;1.11e-08)|Ovarian(172;0.0634)|Breast(254;0.206)	Lung NSC(153;0.191)	Epithelial(36;3.72e-24)|all cancers(36;6.22e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.1e-18)|Lung(62;4.65e-05)|LUSC - Lung squamous cell carcinoma(58;5.31e-05)	GBM - Glioblastoma multiforme(46;2.37e-05)		AGAGGGGTGGCGTGACCTGTG	0.597000													5	29					0	0	0.029380	0	0
MUC4	4585	broad.mit.edu	37	3	195505838	195505838	+	Missense_Mutation	SNP	G	C	C	rs59101491		TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr3:195505838G>C	uc011bto.1	-	3	12689	c.12229C>G	c.(12229-12231)CAC>GAC	p.H4077D	MUC4_uc003fva.2_5'Flank|MUC4_uc003fvb.2_5'Flank|MUC4_uc003fvc.2_5'Flank|MUC4_uc003fvd.2_5'Flank|MUC4_uc003fve.2_5'Flank|MUC4_uc010hzr.2_5'Flank|MUC4_uc011btf.1_Intron|MUC4_uc011btg.1_Intron|MUC4_uc011bth.1_Intron|MUC4_uc011bti.1_Intron|MUC4_uc011btj.1_Intron|MUC4_uc011btk.1_Intron|MUC4_uc011btl.1_Intron|MUC4_uc011btm.1_Intron|MUC4_uc011btn.1_Intron|MUC4_uc003fvo.2_Intron|MUC4_uc003fvp.2_Intron|MUC4_uc010hzu.1_Intron	NM_018406	NP_060876	Q99102	MUC4_HUMAN	mucin 4 isoform a	Error:AA_residue_mismatch_between_GAF_and_UniProt_prot_seqs_after_alignment					cell-matrix adhesion	integral to plasma membrane|proteinaceous extracellular matrix	ErbB-2 class receptor binding|extracellular matrix constituent, lubricant activity				0	all_cancers(143;1.11e-08)|Ovarian(172;0.0634)|Breast(254;0.206)	Lung NSC(153;0.191)	Epithelial(36;3.72e-24)|all cancers(36;6.22e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.1e-18)|Lung(62;4.65e-05)|LUSC - Lung squamous cell carcinoma(58;5.31e-05)	GBM - Glioblastoma multiforme(46;2.37e-05)		GGGGTGGCGTGACCTGTGGAT	0.597000													4	26					0	0	0.021553	0	0
SFRS12	140890	broad.mit.edu	37	5	65458302	65458302	+	Missense_Mutation	SNP	C	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr5:65458302C>T	uc003juo.2	+	6	949	c.289C>T	c.(289-291)CGG>TGG	p.R97W	SFRS12_uc003jun.2_Missense_Mutation_p.R213W|SFRS12_uc010iwy.2_Missense_Mutation_p.R97W	NM_139168	NP_631907	Q8WXA9	SREK1_HUMAN	splicing factor, arginine/serine-rich 12 isoform	97	RRM.				mRNA processing|RNA splicing	spliceosomal complex	nucleic acid binding|nucleotide binding|protein binding				0		Lung NSC(167;9.34e-06)|Prostate(74;0.00187)|Ovarian(174;0.0545)|Breast(144;0.0928)|Colorectal(97;0.234)		Lung(70;0.00449)		GAAGTTTGTGCGGATGGCAGG	0.393000													5	440					0	0	0.021553	0	0
FOXP2	93986	broad.mit.edu	37	7	114269985	114269985	+	Silent	SNP	A	G	G			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr7:114269985A>G	uc003vhb.2	+	5	896	c.522A>G	c.(520-522)CAA>CAG	p.Q174Q	FOXP2_uc003vgu.2_RNA|FOXP2_uc003vgz.2_Silent_p.Q199Q|FOXP2_uc003vha.2_Silent_p.Q82Q|FOXP2_uc011kmu.1_Silent_p.Q191Q|FOXP2_uc011kmv.1_Silent_p.Q174Q|FOXP2_uc010ljz.1_Silent_p.Q82Q|FOXP2_uc003vgt.1_RNA|FOXP2_uc003vgv.1_Silent_p.Q174Q|FOXP2_uc003vgx.2_Silent_p.Q174Q|FOXP2_uc003vhd.2_Silent_p.Q174Q|FOXP2_uc003vhc.2_Silent_p.Q199Q	NM_014491	NP_055306	O15409	FOXP2_HUMAN	forkhead box P2 isoform I	174	Gln-rich.				camera-type eye development|caudate nucleus development|cerebellum development|cerebral cortex development|embryo development|growth|lung alveolus development|negative regulation of transcription, DNA-dependent|pattern specification process|positive regulation of epithelial cell proliferation involved in lung morphogenesis|positive regulation of mesenchymal cell proliferation|post-embryonic development|putamen development|regulation of sequence-specific DNA binding transcription factor activity|righting reflex|skeletal muscle tissue development|smooth muscle tissue development|vocal learning	cytoplasm|transcription factor complex	chromatin binding|DNA bending activity|double-stranded DNA binding|promoter binding|protein heterodimerization activity|protein homodimerization activity|sequence-specific DNA binding|sequence-specific enhancer binding RNA polymerase II transcription factor activity|specific RNA polymerase II transcription factor activity|specific transcriptional repressor activity|transcription activator activity|transcription factor binding|zinc ion binding	p.Q174*(1)		ovary(4)|pancreas(1)|lung(1)|breast(1)|skin(1)	8						aacaacaacaacagcagcaac	0.164000													4	201					0	0	0.021553	0	0
WDR38	401551	broad.mit.edu	37	9	127619137	127619137	+	Missense_Mutation	SNP	G	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr9:127619137G>A	uc004box.2	+	7	801	c.745G>A	c.(745-747)GCC>ACC	p.A249T	WDR38_uc011lzn.1_Missense_Mutation_p.A238T|WDR38_uc011lzo.1_Missense_Mutation_p.A249T|WDR38_uc011lzp.1_Missense_Mutation_p.A200T	NM_001045476	NP_001038941	Q5JTN6	WDR38_HUMAN	WD repeat domain 38	249	WD 6.										0						GCTGTGGCTGGCCAGCGCCGG	0.612000													5	344					0	0	0.021553	0	0
MAGEA12	4111	broad.mit.edu	37	X	151896334	151896334	+	RNA	SNP	G	A	A	rs2515828	by1000genomes	TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chrX:151896334G>A	uc004fgb.2	-	4		c.433C>T						P43365	MAGAC_HUMAN	Homo sapiens melanoma antigen family A, 12, mRNA (cDNA clone MGC:4914 IMAGE:3450217), complete cds.											skin(1)	1	Acute lymphoblastic leukemia(192;6.56e-05)					GTTCCCTTCCGGGTTGTCTTG	0.527000													4	225					0	0	0.014758	0	0
SFRS4	6429	broad.mit.edu	37	1	29475219	29475221	+	In_Frame_Del	DEL	CTT	-	-	rs138237342	by1000genomes	TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr1:29475219_29475221delCTT	uc001bro.2	-	6	1559_1561	c.1186_1188delAAG	c.(1186-1188)AAGdel	p.K396del	SFRS4_uc010ofy.1_3'UTR	NM_005626	NP_005617	Q08170	SRSF4_HUMAN	splicing factor, arginine/serine-rich 4	396	Arg/Ser-rich (RS domain).				mRNA 3'-end processing|mRNA export from nucleus|nuclear mRNA splicing, via spliceosome|termination of RNA polymerase II transcription	nuclear speck	nucleotide binding|RNA binding				0		Colorectal(325;0.00161)|Breast(348;0.0364)|Myeloproliferative disorder(586;0.0393)|all_neural(195;0.0529)|Lung NSC(340;0.0654)|all_lung(284;0.074)|Ovarian(437;0.104)|Medulloblastoma(700;0.151)		Colorectal(126;1.01e-07)|COAD - Colon adenocarcinoma(152;6.21e-06)|STAD - Stomach adenocarcinoma(196;0.0196)|BRCA - Breast invasive adenocarcinoma(304;0.0531)|READ - Rectum adenocarcinoma(331;0.0649)|KIRC - Kidney renal clear cell carcinoma(1967;0.138)		CAGTGTCTTCCTTCTTCTTCTTC	0.325													9	580	---	---	---	---					
BTBD7	55727	broad.mit.edu	37	14	93761192	93761193	+	Frame_Shift_Ins	INS	-	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr14:93761192_93761193insT	uc001ybo.2	-	3	499_500	c.173_174insA	c.(172-174)AAGfs	p.K58fs	BTBD7_uc010aur.2_5'UTR|BTBD7_uc010two.1_5'UTR|BTBD7_uc001ybp.2_Intron|BTBD7_uc001ybq.3_5'UTR|BTBD7_uc001ybr.2_Frame_Shift_Ins_p.K58fs	NM_001002860	NP_001002860	Q9P203	BTBD7_HUMAN	BTB (POZ) domain containing 7 isoform 1	58										pancreas(1)	1		all_cancers(154;0.08)		Epithelial(152;0.196)|COAD - Colon adenocarcinoma(157;0.212)|all cancers(159;0.223)		CAGAGGTTCTCTTTTTTTTGTC	0.441													8	855	---	---	---	---					
ADAM6	8755	broad.mit.edu	37	14	106877821	106877826	+	RNA	DEL	CTACTG	-	-			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr14:106877821_106877826delCTACTG	uc010tyt.1	-	277		c.11273_11278delCAGTAG			uc010tyu.1_In_Frame_Del_p.42_44SSS>S					Parts of antibodies, mostly variable regions.												0						GTAGTAACTACTACTGCTGATGGAGC	0.607													10	387	---	---	---	---					
COQ9	57017	broad.mit.edu	37	16	57486732	57486734	+	In_Frame_Del	DEL	GAG	-	-	rs149029279		TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr16:57486732_57486734delGAG	uc002elq.2	+	3	278_280	c.262_264delGAG	c.(262-264)GAGdel	p.E91del	COQ9_uc002elp.1_In_Frame_Del_p.E91del|COQ9_uc010vhn.1_In_Frame_Del_p.E91del|COQ9_uc010vho.1_In_Frame_Del_p.E91del|COQ9_uc010vhp.1_In_Frame_Del_p.E91del|COQ9_uc002elr.2_In_Frame_Del_p.E91del	NM_020312	NP_064708	O75208	COQ9_HUMAN	coenzyme Q9 homolog precursor	91					ubiquinone biosynthetic process	mitochondrion				breast(1)	1						CCAGGGCGGCGAGGAGGAGGAGG	0.576													8	575	---	---	---	---					
RAI1	10743	broad.mit.edu	37	17	17699993	17699995	+	In_Frame_Del	DEL	GCA	-	-			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr17:17699993_17699995delGCA	uc002grm.2	+	3	4200_4202	c.3731_3733delGCA	c.(3730-3735)CGCAGC>CGC	p.S1249del	RAI1_uc002grn.1_In_Frame_Del_p.S1249del	NM_030665	NP_109590	Q7Z5J4	RAI1_HUMAN	retinoic acid induced 1	1249	Poly-Ser.					cytoplasm|nucleus	zinc ion binding			central_nervous_system(1)|skin(1)	2				READ - Rectum adenocarcinoma(1115;0.0276)		TTGCGGAGCCGCAGCAGCAGCAG	0.626													7	176	---	---	---	---					
POLDIP2	26073	broad.mit.edu	37	17	26684394	26684395	+	Splice_Site	INS	-	G	G	rs113730440		TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr17:26684394_26684395insG	uc002haz.2	-	2	210	c.78_splice	c.e2+1	p.W26_splice	POLDIP2_uc010wag.1_RNA|TMEM199_uc002hba.2_5'Flank|SARM1_uc010wah.1_5'Flank	NM_015584	NP_056399	Q9Y2S7	PDIP2_HUMAN	DNA polymerase delta interacting protein 2							mitochondrial nucleoid|nucleus					0	all_lung(13;0.000354)|Lung NSC(42;0.00115)			UCEC - Uterine corpus endometrioid carcinoma (53;0.154)		AGAGCGGCTTTGCCACCGGGCC	0.762													4	8	---	---	---	---					
NLRC4	58484	broad.mit.edu	37	2	32475056	32475056	+	Frame_Shift_Del	DEL	T	-	-			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr2:32475056delT	uc002roi.2	-	4	2123	c.1877delA	c.(1876-1878)AAGfs	p.K626fs	NLRC4_uc002roj.1_Frame_Shift_Del_p.K626fs|NLRC4_uc010ezt.1_Intron	NM_021209	NP_067032	Q9NPP4	NLRC4_HUMAN	caspase recruitment domain protein 12	626					activation of caspase activity|defense response to bacterium|detection of bacterium|interleukin-1 beta secretion|positive regulation of apoptosis	cytoplasm	ATP binding|magnesium ion binding|protein homodimerization activity			ovary(3)|large_intestine(1)|lung(1)|skin(1)	6	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.208)					TTCTGCAGCCTTTTCCCATGA	0.458													7	1090	---	---	---	---					
ZDBF2	57683	broad.mit.edu	37	2	207174427	207174428	+	Frame_Shift_Ins	INS	-	A	A			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr2:207174427_207174428insA	uc002vbp.2	+	5	5425_5426	c.5175_5176insA	c.(5173-5178)GATAAAfs	p.D1725fs		NM_020923	NP_065974	Q9HCK1	ZDBF2_HUMAN	zinc finger, DBF-type containing 2	1725_1726							nucleic acid binding|zinc ion binding			ovary(3)	3						GAAGGGCTGATAAAAAAAAACG	0.450													8	234	---	---	---	---					
ARIH2	10425	broad.mit.edu	37	3	48965064	48965066	+	In_Frame_Del	DEL	GAA	-	-			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr3:48965064_48965066delGAA	uc003cvb.2	+	3	385_387	c.73_75delGAA	c.(73-75)GAAdel	p.E29del	ARIH2_uc003cvc.2_In_Frame_Del_p.E29del|ARIH2_uc003cvf.2_5'UTR|ARIH2_uc010hkl.2_In_Frame_Del_p.E29del|ARIH2_uc003cvd.1_In_Frame_Del_p.E29del|ARIH2_uc003cve.1_In_Frame_Del_p.E29del	NM_006321	NP_006312	O95376	ARI2_HUMAN	ariadne homolog 2	29	Asp/Glu-rich (acidic).|Poly-Glu.				developmental cell growth|hemopoietic stem cell proliferation|protein K48-linked ubiquitination|protein K63-linked ubiquitination|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	cytoplasm|nucleus	nucleic acid binding|protein binding|ubiquitin-protein ligase activity|zinc ion binding			ovary(1)	1				BRCA - Breast invasive adenocarcinoma(193;9.42e-05)|Kidney(197;0.00258)|KIRC - Kidney renal clear cell carcinoma(197;0.00269)		Tgaggaagaggaagaagaagaag	0.463													11	172	---	---	---	---					
NIPAL4	348938	broad.mit.edu	37	5	156887238	156887238	+	Frame_Shift_Del	DEL	C	-	-			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr5:156887238delC	uc003lwx.3	+	1	212	c.96delC	c.(94-96)AGCfs	p.S32fs	ADAM19_uc003lww.1_Intron|NIPAL4_uc011ddq.1_Frame_Shift_Del_p.S32fs|NIPAL4_uc010jin.1_5'Flank	NM_001099287	NP_001092757	Q0D2K0	NIPA4_HUMAN	ichthyin protein	32	Extracellular (Potential).					integral to membrane	receptor activity				0						CGCGCGCGAGCCACGCGGGGG	0.761													2	4	---	---	---	---					
CYP21A2	1589	broad.mit.edu	37	6	31975223	31975224	+	Frame_Shift_Ins	INS	-	T	T			TCGA-FQ-6559-01A-11D-1795-08	TCGA-FQ-6559-11A-01D-1795-08									Somatic	Phase_I	Capture				Illumina GAIIx	a5a9d557-59a4-4686-aa95-9949ab650f46	ed306af5-3b2a-4a96-b231-3d4c86b34366	g.chr6:31975223_31975224insT	uc010jtp.2	+	8	1034_1035	c.916_917insT	c.(916-918)GTTfs	p.V306fs	CYP21A2_uc011dpb.1_Frame_Shift_Ins_p.V276fs			P08686	CP21A_HUMAN	SubName: Full=Cytochrome P450, family 21, subfamily A, polypeptide 2; SubName: Full=Cytochrome P450 21-hydroxylase; SubName: Full=Cytochrome P450, family 21, subfamily A, polypeptide 2, isoform CRA_b; SubName: Full=DJ34F7.3 (Cytochrome P450, subfamily XXIA (Steroid 21-hydroxylase, congenital adrenal hyperplasia), polypeptide 2 (CYP21, P450c21B)); SubName: Full=cDNA, FLJ95495, Homo sapiens cytochrome P450, family 21, subfamily A, polypeptide 2(CYP21A2), mRNA;	305					glucocorticoid biosynthetic process|mineralocorticoid biosynthetic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	electron carrier activity|heme binding|steroid 21-monooxygenase activity|steroid binding				0						CTGGGCCGTGGTTTTTTTTGCT	0.614													7	568	---	---	---	---					
