Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
ABCD3	5825	broad.mit.edu	37	1	94884036	94884036	+	Missense_Mutation	SNP	T	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:94884036T>A	uc001dqn.3	+	1	104	c.2T>A	c.(1-3)ATG>AAG	p.M1K	ABCD3_uc001dqm.3_Missense_Mutation_p.M1K|ABCD3_uc010oto.1_Missense_Mutation_p.M1K|ABCD3_uc010otp.1_5'UTR|ABCD3_uc009wdr.2_Missense_Mutation_p.M1K	NM_002858	NP_002849	P28288	ABCD3_HUMAN	ATP-binding cassette, sub-family D, member 3	1	Targeting to peroxisomes.|Interaction with PEX19.				peroxisomal long-chain fatty acid import|peroxisome organization	cytosol|integral to peroxisomal membrane	ATP binding|ATPase activity, coupled to transmembrane movement of substances			skin(1)	1		all_lung(203;0.000434)|Lung NSC(277;0.0019)		all cancers(265;0.0261)|Epithelial(280;0.165)		GGCAGTGCCATGGCGGCCTTC	0.612													3	31					0	0	0.009096	0	0
KIAA1324	57535	broad.mit.edu	37	1	109734382	109734382	+	Missense_Mutation	SNP	C	T	T	rs41279692		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:109734382C>T	uc001dwq.2	+	14	1716	c.1580C>T	c.(1579-1581)ACG>ATG	p.T527M	KIAA1324_uc009wex.1_Missense_Mutation_p.T477M|KIAA1324_uc009wey.2_Missense_Mutation_p.T440M|KIAA1324_uc010ovg.1_Missense_Mutation_p.T425M|KIAA1324_uc001dwr.2_Missense_Mutation_p.T177M	NM_020775	NP_065826	Q6UXG2	K1324_HUMAN	hypothetical protein LOC57535 precursor	527	Extracellular (Potential).				macroautophagy|positive regulation of vacuole organization|regulation of apoptosis	integral to plasma membrane				ovary(2)|haematopoietic_and_lymphoid_tissue(1)|breast(1)|skin(1)	5		all_epithelial(167;0.000102)|all_lung(203;0.000323)|Lung NSC(277;0.00063)		Colorectal(144;0.0188)|Lung(183;0.0527)|COAD - Colon adenocarcinoma(174;0.14)|Epithelial(280;0.21)|all cancers(265;0.249)		CCTGTGGAGACGTGGAAAGGT	0.537													134	23					0	0	0.139131	0	0
HIST2H2BF	440689	broad.mit.edu	37	1	149783741	149783741	+	Silent	SNP	C	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:149783741C>G	uc001esr.2	-	1	188	c.138G>C	c.(136-138)CTG>CTC	p.L46L	HIST2H2BF_uc010pbj.1_Silent_p.L46L|HIST2H2BF_uc010pbk.1_Silent_p.L46L	NM_001024599	NP_001019770	Q5QNW6	H2B2F_HUMAN	histone cluster 2, H2bf isoform a	46					nucleosome assembly	nucleosome|nucleus	DNA binding				0	Breast(34;0.0124)|all_hematologic(923;0.127)					GGACCTGCTTCAGCACCTTGT	0.582													261	372					0	0	0.139131	0	0
ADAMTSL4	54507	broad.mit.edu	37	1	150527966	150527966	+	Silent	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:150527966T>C	uc001eux.2	+	8	1532	c.1296T>C	c.(1294-1296)CGT>CGC	p.R432R	ADAMTSL4_uc001euw.2_Silent_p.R432R|ADAMTSL4_uc009wlw.2_Silent_p.R455R|ADAMTSL4_uc010pcg.1_Silent_p.R455R|ADAMTSL4_uc009wlx.2_5'Flank	NM_019032	NP_061905	Q6UY14	ATL4_HUMAN	thrombospondin repeat containing 1 isoform 1	432					apoptosis|positive regulation of apoptosis		metalloendopeptidase activity|protease binding			ovary(1)|skin(1)	2	all_cancers(9;3.13e-53)|all_epithelial(9;3.74e-43)|all_lung(15;2.43e-34)|Lung NSC(24;8.86e-31)|Breast(34;0.000326)|Lung SC(34;0.00471)|Ovarian(49;0.0167)|all_hematologic(923;0.0395)|Hepatocellular(266;0.108)|Melanoma(130;0.128)|Colorectal(459;0.171)		UCEC - Uterine corpus endometrioid carcinoma (35;0.0241)|Epithelial(6;3.18e-23)|all cancers(9;1.79e-22)|OV - Ovarian serous cystadenocarcinoma(6;1.13e-14)|BRCA - Breast invasive adenocarcinoma(12;0.000503)|LUSC - Lung squamous cell carcinoma(543;0.171)|STAD - Stomach adenocarcinoma(528;0.206)			TCTATGTCCGTCACACTGAAA	0.602													14	87					0	0	0.033300	0	0
PRG4	10216	broad.mit.edu	37	1	186277987	186277987	+	Missense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:186277987C>T	uc001gru.3	+	7	3187	c.3136C>T	c.(3136-3138)CCA>TCA	p.P1046S	PRG4_uc001grt.3_Missense_Mutation_p.P1005S|PRG4_uc009wyl.2_Missense_Mutation_p.P953S|PRG4_uc009wym.2_Missense_Mutation_p.P912S|PRG4_uc010poo.1_RNA	NM_005807	NP_005798	Q92954	PRG4_HUMAN	proteoglycan 4 isoform A	1046					cell proliferation|immune response	extracellular region	polysaccharide binding|protein binding|scavenger receptor activity			skin(1)	1						AGTGAGAAAACCAAAGACGAC	0.448													62	33					0	0	0.139131	0	0
IGFN1	91156	broad.mit.edu	37	1	201195105	201195105	+	Missense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:201195105C>T	uc001gwc.2	+	11	2892	c.2120C>T	c.(2119-2121)GCA>GTA	p.A707V	IGFN1_uc001gwb.2_RNA	NM_178275	NP_840059			RecName: Full=Immunoglobulin-like and fibronectin type III domain-containing protein 1; AltName: Full=EEF1A2-binding protein 1; AltName: Full=KY-interacting protein 1;											ovary(2)|pancreas(1)	3						TGGCACGAGGCAGCCGACCGC	0.667													18	84					0	0	0.069288	0	0
ANKRD30A	91074	broad.mit.edu	37	10	37430948	37430948	+	Missense_Mutation	SNP	C	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:37430948C>G	uc001iza.1	+	7	1054	c.955C>G	c.(955-957)CCA>GCA	p.P319A		NM_052997	NP_443723	Q9BXX3	AN30A_HUMAN	ankyrin repeat domain 30A	375						nucleus	DNA binding|sequence-specific DNA binding transcription factor activity			ovary(7)|breast(1)|skin(1)	9						ATTTACGTGGCCAGCAAAAGG	0.423													8	154					0	0	0.058154	0	0
LOC650623	650623	broad.mit.edu	37	10	81443781	81443781	+	RNA	SNP	A	T	T	rs143569743	by1000genomes	TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:81443781A>T	uc010qlu.1	+	1		c.1051A>T				NR_027512				Homo sapiens BEN domain containing 3 pseudogene (LOC650623), non-coding RNA.												0						GACCACAAAGACGAGGAGGAG	0.622													5	26					0	0	0.038395	0	0
LOC650623	650623	broad.mit.edu	37	10	81443821	81443821	+	RNA	SNP	C	G	G	rs150975459	by1000genomes	TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:81443821C>G	uc010qlu.1	+	1		c.1091C>G				NR_027512				Homo sapiens BEN domain containing 3 pseudogene (LOC650623), non-coding RNA.												0						GCAGCACCATCGCCTCAGACC	0.612													6	43					0	0	0.132662	0	0
SLC16A12	387700	broad.mit.edu	37	10	91198576	91198576	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:91198576C>T	uc001kgm.2	-	6	1114	c.723G>A	c.(721-723)TTG>TTA	p.L241L	SLC16A12_uc001kgl.2_5'Flank	NM_213606	NP_998771	Q6ZSM3	MOT12_HUMAN	solute carrier family 16 (monocarboxylic acid	241	Extracellular (Potential).					integral to membrane|plasma membrane	symporter activity			skin(1)	1						ACTCTTGCTGCAAACAGCAAC	0.448													36	9					0	0	0.092188	0	0
LGALS12	85329	broad.mit.edu	37	11	63278567	63278567	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr11:63278567G>A	uc001nxa.2	+	6	955	c.614G>A	c.(613-615)AGC>AAC	p.S205N	LGALS12_uc001nxb.2_Intron|LGALS12_uc001nxc.2_Missense_Mutation_p.S206N|LGALS12_uc001nxd.2_Missense_Mutation_p.S144N|LGALS12_uc001nxe.2_Intron|LGALS12_uc009yot.2_Missense_Mutation_p.S165N	NM_033101	NP_149092	Q96DT0	LEG12_HUMAN	lectin, galactoside-binding, soluble, 12 isoform	205					apoptosis|induction of apoptosis by intracellular signals	nucleus	lactose binding			ovary(2)	2						CTGCTGATGAGCCCCAGGCTG	0.552													7	79					0	0	0.029380	0	0
PACS1	55690	broad.mit.edu	37	11	65983735	65983735	+	Splice_Site	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr11:65983735G>A	uc001oha.1	+	5	939	c.805_splice	c.e5+1	p.D269_splice	PACS1_uc001ogz.1_Splice_Site_p.D269_splice	NM_018026	NP_060496	Q6VY07	PACS1_HUMAN	phosphofurin acidic cluster sorting protein 1						interspecies interaction between organisms|regulation of defense response to virus by virus|viral reproduction	cytosol	protein binding			ovary(6)	6						AAGCTTTCTGGTAAGAAGCAT	0.498													6	44					0	0	0.038147	0	0
TCP11L2	255394	broad.mit.edu	37	12	106717367	106717367	+	Missense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr12:106717367C>T	uc001tln.2	+	6	889	c.715C>T	c.(715-717)CGC>TGC	p.R239C	TCP11L2_uc001tll.2_Missense_Mutation_p.R239C|TCP11L2_uc001tlm.2_Missense_Mutation_p.R239C	NM_152772	NP_689985	Q8N4U5	T11L2_HUMAN	t-complex 11 (mouse) like 2	239										ovary(3)	3						GCACCTTCAACGCCAGTTGGT	0.338													6	166					0	0	0.047766	0	0
LCP1	3936	broad.mit.edu	37	13	46721149	46721149	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr13:46721149G>A	uc001vaz.3	-	10	1194	c.1068C>T	c.(1066-1068)GTC>GTT	p.V356V	LCP1_uc001vay.3_5'Flank|LCP1_uc001vba.3_Silent_p.V356V	NM_002298	NP_002289	P13796	PLSL_HUMAN	L-plastin	356	CH 2.|Actin-binding 1.				regulation of intracellular protein transport|T cell activation involved in immune response	cell junction|cytosol|ruffle membrane	calcium ion binding			lung(4)|ovary(3)	7		Lung NSC(96;1.27e-05)|Breast(56;8.04e-05)|Prostate(109;0.00217)|Hepatocellular(98;0.0207)|Lung SC(185;0.0262)	KIRC - Kidney renal clear cell carcinoma(16;0.234)	GBM - Glioblastoma multiforme(144;5.39e-05)		GGTTCCCTCGGACAACATCTG	0.547			T	BCL6	NHL 								69	63					0	0	0.139131	0	0
COL4A1	1282	broad.mit.edu	37	13	110839549	110839549	+	Missense_Mutation	SNP	G	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr13:110839549G>T	uc001vqw.3	-	25	1786	c.1664C>A	c.(1663-1665)ACA>AAA	p.T555K	COL4A1_uc010agl.2_Intron	NM_001845	NP_001836	P02462	CO4A1_HUMAN	alpha 1 type IV collagen preproprotein	555	Triple-helical region.				angiogenesis|axon guidance		extracellular matrix structural constituent|platelet-derived growth factor binding			ovary(3)|lung(1)|central_nervous_system(1)|pancreas(1)	6	all_cancers(4;9.8e-13)|all_epithelial(4;9.66e-08)|all_lung(23;3.75e-06)|Lung NSC(43;0.000274)|Colorectal(4;0.00178)|all_neural(89;0.00459)|Medulloblastoma(90;0.00596)|Lung SC(71;0.0604)	Breast(118;0.2)	BRCA - Breast invasive adenocarcinoma(86;0.11)|all cancers(43;0.145)			CGCTCTCCCTGTCATGCCGGG	0.572													8	146					5.18039e-06	5.52963e-06	0.038147	1	0
NFATC4	4776	broad.mit.edu	37	14	24839702	24839702	+	Silent	SNP	A	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr14:24839702A>G	uc001wpc.2	+	2	1419	c.1098A>G	c.(1096-1098)GGA>GGG	p.G366G	NFATC4_uc010tok.1_Silent_p.G429G|NFATC4_uc010tol.1_Silent_p.G429G|NFATC4_uc010alr.2_Silent_p.G429G|NFATC4_uc010als.2_Silent_p.G379G|NFATC4_uc010tom.1_Silent_p.G379G|NFATC4_uc010ton.1_Silent_p.G379G|NFATC4_uc010too.1_Silent_p.G379G|NFATC4_uc010alt.2_Silent_p.G398G|NFATC4_uc010top.1_Silent_p.G398G|NFATC4_uc010toq.1_Silent_p.G398G|NFATC4_uc010alu.2_Intron|NFATC4_uc010tor.1_Silent_p.G366G|NFATC4_uc010tos.1_Silent_p.G296G|NFATC4_uc010tot.1_Silent_p.G354G|NFATC4_uc010tou.1_Silent_p.G296G|NFATC4_uc010tov.1_Silent_p.G354G|NFATC4_uc010tow.1_Silent_p.G296G|NFATC4_uc010alv.2_Silent_p.G354G|NFATC4_uc010tox.1_Silent_p.G296G|NFATC4_uc001wpd.2_5'Flank|NFATC4_uc010toy.1_5'Flank|NFATC4_uc010toz.1_5'Flank	NM_004554	NP_004545	Q14934	NFAC4_HUMAN	nuclear factor of activated T-cells,	366					cell differentiation|inflammatory response|transcription from RNA polymerase II promoter	cytoplasm|intermediate filament cytoskeleton|nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|transcription coactivator activity			ovary(1)|central_nervous_system(1)|skin(1)	3				GBM - Glioblastoma multiforme(265;0.018)		CTCCTCCAGGAGGTTCCCGGA	0.637													27	48					0	0	0.134883	0	0
ACOT4	122970	broad.mit.edu	37	14	74059007	74059007	+	Missense_Mutation	SNP	A	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr14:74059007A>G	uc001xoo.2	+	1	598	c.344A>G	c.(343-345)GAG>GGG	p.E115G		NM_152331	NP_689544	Q8N9L9	ACOT4_HUMAN	acyl-CoA thioesterase 4	115					acyl-CoA metabolic process|dicarboxylic acid metabolic process|long-chain fatty acid metabolic process|saturated monocarboxylic acid metabolic process|short-chain fatty acid metabolic process|succinyl-CoA metabolic process|unsaturated monocarboxylic acid metabolic process|very long-chain fatty acid metabolic process	peroxisome	carboxylesterase activity|palmitoyl-CoA hydrolase activity				0				BRCA - Breast invasive adenocarcinoma(234;0.00331)		CACGACCCCGAGCCTGGACGG	0.692													9	20					0	0	0.058154	0	0
GALC	2581	broad.mit.edu	37	14	88442747	88442747	+	Missense_Mutation	SNP	G	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr14:88442747G>T	uc001xvt.2	-	7	1106	c.707C>A	c.(706-708)TCC>TAC	p.S236Y	GALC_uc010tvw.1_RNA|GALC_uc010tvx.1_Missense_Mutation_p.S210Y|GALC_uc010tvy.1_Missense_Mutation_p.S213Y|GALC_uc010tvz.1_Missense_Mutation_p.S180Y|GALC_uc001xvu.1_Missense_Mutation_p.S236Y	NM_000153	NP_000144	P54803	GALC_HUMAN	galactosylceramidase isoform a precursor	236					carbohydrate metabolic process|galactosylceramide catabolic process	lysosome	cation binding|galactosylceramidase activity				0						AAGGAGCATGGATGCAGAGAT	0.398													66	47					3.26865e-45	3.74122e-45	0.139131	1	0
GPR65	8477	broad.mit.edu	37	14	88477718	88477718	+	Nonsense_Mutation	SNP	T	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr14:88477718T>A	uc001xvv.2	+	2	1057	c.527T>A	c.(526-528)TTA>TAA	p.L176*		NM_003608	NP_003599	Q8IYL9	PSYR_HUMAN	G protein-coupled receptor 65	176	Extracellular (Potential).				actin cytoskeleton reorganization|activation of Rho GTPase activity|apoptosis|immune response|multicellular organismal development|positive regulation of cAMP biosynthetic process|positive regulation of stress fiber assembly|response to acidity	integral to plasma membrane	G-protein coupled receptor activity				0						AAATACCCTTTAGAGAAATGG	0.408													41	106					0	0	0.139131	0	0
RTL1	388015	broad.mit.edu	37	14	101348096	101348096	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr14:101348096G>A	uc010txj.1	-	1	3089	c.3030C>T	c.(3028-3030)GCC>GCT	p.A1010A	MIR433_hsa-mir-433|MI0001723_5'Flank|uc001yig.3_5'Flank|MIR127_hsa-mir-127|MI0000472_5'Flank|MIR432_hsa-mir-432|MI0003133_5'Flank|uc010txk.1_5'Flank|MIR136_hsa-mir-136|MI0000475_5'Flank	NM_001134888	NP_001128360	A6NKG5	RTL1_HUMAN	retrotransposon-like 1	1010										pancreas(1)	1						TTTGCCTGGCGGCAGTGTTCC	0.577													11	4					0	0	0.080935	0	0
CSNK1G1	53944	broad.mit.edu	37	15	64499781	64499781	+	Missense_Mutation	SNP	C	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr15:64499781C>G	uc002anf.2	-	7	1172	c.692G>C	c.(691-693)AGA>ACA	p.R231T	CSNK1G1_uc002ane.2_RNA|CSNK1G1_uc002ang.1_Missense_Mutation_p.R231T|CSNK1G1_uc002anh.1_Missense_Mutation_p.R231T|CSNK1G1_uc002anj.2_Missense_Mutation_p.R213T	NM_022048	NP_071331	Q9HCP0	KC1G1_HUMAN	casein kinase 1, gamma 1	231	Protein kinase.				Wnt receptor signaling pathway	cytoplasm	ATP binding|protein serine/threonine kinase activity				0						CAAATCATCTCTCCGGCTTTG	0.453													16	52					0	0	0.055883	0	0
ADAMTS7	11173	broad.mit.edu	37	15	79060510	79060511	+	Missense_Mutation	DNP	TT	GC	GC			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr15:79060510_79060511TT>GC	uc002bej.3	-	17	2820_2821	c.2609_2610AA>GC	c.(2608-2610)CAA>CGC	p.Q870R	ADAMTS7_uc010und.1_Missense_Mutation_p.Q446R	NM_014272	NP_055087	Q9UKP4	ATS7_HUMAN	ADAM metallopeptidase with thrombospondin type 1	870	TSP type-1 2.				proteolysis	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding				0						ACTTCCTCTGTTGGTCATCAGG	0.465													3	36					0	0	0.115264	0	0
AP3B2	8120	broad.mit.edu	37	15	83346082	83346082	+	Missense_Mutation	SNP	G	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr15:83346082G>C	uc010uoh.1	-	13	1609	c.1432C>G	c.(1432-1434)CCA>GCA	p.P478A	AP3B2_uc010uoi.1_Missense_Mutation_p.P478A|AP3B2_uc010uoj.1_Missense_Mutation_p.P446A|AP3B2_uc010uog.1_Missense_Mutation_p.P114A	NM_004644	NP_004635	Q13367	AP3B2_HUMAN	adaptor-related protein complex 3, beta 2	478					endocytosis|intracellular protein transport|post-Golgi vesicle-mediated transport	clathrin coated vesicle membrane|COPI-coated vesicle|membrane coat	binding|protein transporter activity			ovary(3)|breast(1)|pancreas(1)	5			BRCA - Breast invasive adenocarcinoma(143;0.229)			TGTTGTGCTGGCTGCATCTGT	0.478													6	40					0	0	0.058154	0	0
AKAP13	11214	broad.mit.edu	37	15	86123866	86123866	+	Missense_Mutation	SNP	T	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr15:86123866T>G	uc002blv.1	+	7	2737	c.2567T>G	c.(2566-2568)CTT>CGT	p.L856R	AKAP13_uc002blt.1_Missense_Mutation_p.L856R|AKAP13_uc002blu.1_Missense_Mutation_p.L856R|AKAP13_uc010bne.1_5'Flank	NM_007200	NP_009131	Q12802	AKP13_HUMAN	A-kinase anchor protein 13 isoform 2	856					apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol|membrane|membrane fraction|nucleus	cAMP-dependent protein kinase activity|metal ion binding|protein binding|Rho guanyl-nucleotide exchange factor activity|signal transducer activity	p.E855_G859>G(1)		central_nervous_system(3)|kidney(2)|urinary_tract(1)|liver(1)|skin(1)|ovary(1)	9						GCTGCAGAGCTTCAGCACGGG	0.552													49	125					0	0	0.139131	0	0
CNTNAP4	85445	broad.mit.edu	37	16	76528954	76528954	+	Missense_Mutation	SNP	G	A	A	rs138136389	byFrequency	TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr16:76528954G>A	uc002feu.1	+	16	2613	c.2228G>A	c.(2227-2229)CGG>CAG	p.R743Q	CNTNAP4_uc002fev.1_Missense_Mutation_p.R607Q|CNTNAP4_uc010chb.1_Missense_Mutation_p.R670Q|CNTNAP4_uc002fex.1_Missense_Mutation_p.R746Q|CNTNAP4_uc002few.2_Missense_Mutation_p.R718Q	NM_033401	NP_207837	Q9C0A0	CNTP4_HUMAN	cell recognition protein CASPR4 isoform 1	743	Extracellular (Potential).|Fibrinogen C-terminal.				cell adhesion|signal transduction	integral to membrane	receptor binding			ovary(1)|pancreas(1)	2						GATGCTGACCGGAATGAATGG	0.358													50	88					0	0	0.139131	0	0
MYH1	4619	broad.mit.edu	37	17	10419562	10419562	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:10419562G>A	uc002gmo.2	-	4	396	c.302C>T	c.(301-303)GCT>GTT	p.A101V	uc002gml.1_Intron	NM_005963	NP_005954	P12882	MYH1_HUMAN	myosin, heavy chain 1, skeletal muscle, adult	101	Myosin head-like.					muscle myosin complex|myofibril|myosin filament	actin binding|ATP binding|calmodulin binding|motor activity			ovary(10)|skin(6)|breast(3)|upper_aerodigestive_tract(1)|kidney(1)	21						GTACAGCACAGCAGGCTCGTG	0.458													5	322					0	0	0.021553	0	0
AATF	26574	broad.mit.edu	37	17	35348139	35348139	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:35348139G>A	uc002hni.2	+	8	1632	c.1381G>A	c.(1381-1383)GAT>AAT	p.D461N	AATF_uc002hnj.2_RNA	NM_012138	NP_036270	Q9NY61	AATF_HUMAN	apoptosis antagonizing transcription factor	461	RB1 and SP1 binding.				anti-apoptosis|apoptosis|induction of apoptosis by extracellular signals|negative regulation of superoxide anion generation|nerve growth factor receptor signaling pathway|positive regulation of transcription from RNA polymerase II promoter|response to DNA damage stimulus	centrosome|focal adhesion|nucleolus	leucine zipper domain binding|sequence-specific DNA binding transcription factor activity				0		Breast(25;0.00607)				CTTTGATGATGATGACTTTTA	0.373													38	77					0	0	0.139131	0	0
KRTAP4-11	653240	broad.mit.edu	37	17	39274379	39274379	+	Silent	SNP	G	A	A	rs411996	by1000genomes	TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:39274379G>A	uc002hvz.2	-	1	228	c.189C>T	c.(187-189)ACC>ACT	p.T63T		NM_033059	NP_149048	Q9BYQ6	KR411_HUMAN	keratin associated protein 4-11	63	8.|27 X 5 AA repeats of C-C-[GIKRQVHEL]- [SPTR]-[STVQRMC].		Missing (in allele KAP4.14).			keratin filament					0		Breast(137;0.000496)	STAD - Stomach adenocarcinoma(17;0.000371)			GGCGGCAGCAGGTGGGCTGGC	0.657													4	96					0	0	0.014758	0	0
SGCA	6442	broad.mit.edu	37	17	48246488	48246488	+	Missense_Mutation	SNP	C	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:48246488C>G	uc002iqi.2	+	6	656	c.620C>G	c.(619-621)TCT>TGT	p.S207C	SGCA_uc010wmh.1_Missense_Mutation_p.S105C|SGCA_uc002iqj.2_Intron|SGCA_uc010wmi.1_RNA|uc010dbn.1_5'Flank	NM_000023	NP_000014	Q16586	SGCA_HUMAN	sarcoglycan, alpha isoform 1 precursor	207	Extracellular (Potential).				muscle contraction|muscle organ development	cytoplasm|cytoskeleton|integral to membrane|sarcoglycan complex|sarcolemma	calcium ion binding			ovary(2)	2						TCACCTTTTTCTACTTGCCTG	0.592											OREG0024558	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	67	89					0	0	0.139131	0	0
TEX2	55852	broad.mit.edu	37	17	62290231	62290231	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:62290231G>A	uc002jec.2	-	2	1520	c.1347C>T	c.(1345-1347)CTC>CTT	p.L449L	TEX2_uc002jed.2_Silent_p.L449L|TEX2_uc002jee.2_Silent_p.L449L	NM_018469	NP_060939	Q8IWB9	TEX2_HUMAN	testis expressed sequence 2	449					signal transduction|sphingolipid metabolic process	integral to membrane				ovary(1)	1			BRCA - Breast invasive adenocarcinoma(8;1.33e-10)	READ - Rectum adenocarcinoma(1115;0.0689)		CATCTTCCGCGAGCACCTCTG	0.507													66	230					0	0	0.139131	0	0
LRRC45	201255	broad.mit.edu	37	17	79985969	79985969	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:79985969G>A	uc002kde.2	+	9	1234	c.994G>A	c.(994-996)GAG>AAG	p.E332K		NM_144999	NP_659436	Q96CN5	LRC45_HUMAN	leucine rich repeat containing 45	332	Potential.					centrosome				pancreas(1)	1	all_neural(118;0.0878)|Ovarian(332;0.12)|all_lung(278;0.246)		BRCA - Breast invasive adenocarcinoma(99;0.0114)|OV - Ovarian serous cystadenocarcinoma(97;0.0191)			AGCGGAGCAGGAGCAGCTGAG	0.682													5	10					0	0	0.014758	0	0
ARRDC2	27106	broad.mit.edu	37	19	18120412	18120412	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:18120412G>A	uc002nhv.2	+	4	644	c.501G>A	c.(499-501)GCG>GCA	p.A167A	ARRDC2_uc002nhu.2_Silent_p.A162A	NM_015683	NP_056498	Q8TBH0	ARRD2_HUMAN	arrestin domain containing 2 isoform 1	167										pancreas(1)	1						CACCTCAAGCGGGGGCTCGGG	0.587													47	164					0	0	0.139131	0	0
ZNF737	100129842	broad.mit.edu	37	19	20728170	20728170	+	Missense_Mutation	SNP	G	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:20728170G>C	uc002npa.2	-	4	1019	c.839C>G	c.(838-840)ACT>AGT	p.T280S		NM_001159293	NP_001152765	C9JHM3	C9JHM3_HUMAN	zinc finger protein 737	280					regulation of transcription, DNA-dependent	intracellular	nucleic acid binding|zinc ion binding			ovary(1)	1						TTTCTCTCCAGTATGAATTAT	0.413													3	76					0	0	0.009096	0	0
ZNF626	199777	broad.mit.edu	37	19	20808090	20808090	+	Missense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:20808090C>T	uc002npb.1	-	4	743	c.593G>A	c.(592-594)GGG>GAG	p.G198E	ZNF626_uc002npc.1_Missense_Mutation_p.G122E	NM_001076675	NP_001070143	Q68DY1	ZN626_HUMAN	zinc finger protein 626 isoform 1	198					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			skin(1)	1						GTAGGGTTTCCCTCCAGTATG	0.363													4	92					0	0	0.038147	0	0
ZNF91	7644	broad.mit.edu	37	19	23544867	23544867	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:23544867T>C	uc002nre.2	-	4	1027	c.914A>G	c.(913-915)CAT>CGT	p.H305R	ZNF91_uc010xrj.1_Missense_Mutation_p.H273R	NM_003430	NP_003421	Q05481	ZNF91_HUMAN	zinc finger protein 91	305	C2H2-type 6.					nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding				0		all_lung(12;0.0349)|Lung NSC(12;0.0538)|all_epithelial(12;0.0611)				GGTTGAAGAATGGCTAAAAGC	0.413													8	189					0	0	0.069234	0	0
TULP2	7288	broad.mit.edu	37	19	49398288	49398288	+	Nonsense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:49398288G>A	uc002pkz.2	-	6	632	c.481C>T	c.(481-483)CGA>TGA	p.R161*		NM_003323	NP_003314	O00295	TULP2_HUMAN	tubby like protein 2	161					visual perception	cytoplasm|extracellular region				ovary(1)|kidney(1)|skin(1)	3		all_epithelial(76;5.29e-07)|all_lung(116;1.7e-06)|Lung NSC(112;3.55e-06)|all_neural(266;0.0189)|Ovarian(192;0.0261)		OV - Ovarian serous cystadenocarcinoma(262;0.000259)|all cancers(93;0.000435)|Epithelial(262;0.0221)|GBM - Glioblastoma multiforme(486;0.0234)		CCCTTGCGTCGGATTCTCGGA	0.522													24	92					0	0	0.108266	0	0
ZNF845	91664	broad.mit.edu	37	19	53855364	53855365	+	Missense_Mutation	DNP	CA	TG	TG			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:53855364_53855365CA>TG	uc010ydv.1	+	4	1553_1554	c.1436_1437CA>TG	c.(1435-1437)ACA>ATG	p.T479M	ZNF845_uc010ydw.1_Missense_Mutation_p.T479M	NM_138374	NP_612383	Q96IR2	ZN845_HUMAN	zinc finger protein 845	479	C2H2-type 10.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0						TTCAGTCAGACATCATCCCTTG	0.381													5	214					0	0	0.115264	0	0
LILRA4	23547	broad.mit.edu	37	19	54849692	54849692	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:54849692G>A	uc002qfj.2	-	3	387	c.330C>T	c.(328-330)AGC>AGT	p.S110S	LILRA4_uc002qfi.2_Silent_p.S44S	NM_012276	NP_036408	P59901	LIRA4_HUMAN	leukocyte immunoglobulin-like receptor subfamily	110	Ig-like C2-type 1.|Extracellular (Potential).					integral to membrane	receptor activity			upper_aerodigestive_tract(1)|central_nervous_system(1)	2	Ovarian(34;0.19)			GBM - Glioblastoma multiforme(193;0.0565)		CCAGGGGGTCGCTGGGCTCTG	0.607													38	92					0	0	0.139131	0	0
ZNF71	58491	broad.mit.edu	37	19	57132975	57132975	+	Missense_Mutation	SNP	G	A	A	rs139335499		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:57132975G>A	uc002qnm.3	+	3	558	c.320G>A	c.(319-321)CGT>CAT	p.R107H		NM_021216	NP_067039	Q9NQZ8	ZNF71_HUMAN	zinc finger protein 71	107						nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			skin(1)	1				GBM - Glioblastoma multiforme(193;0.062)|Lung(386;0.0681)|LUSC - Lung squamous cell carcinoma(496;0.18)		CCCGTAAGGCGTGGCAAGAAC	0.582													19	94					0	0	0.076483	0	0
ZNF835	90485	broad.mit.edu	37	19	57175214	57175214	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:57175214G>A	uc010ygo.1	-	2	1419	c.1419C>T	c.(1417-1419)TGC>TGT	p.C473C	ZNF835_uc010ygn.1_Silent_p.C451C	NM_001005850	NP_001005850			zinc finger protein 835											pancreas(3)|skin(1)	4						AGGCCTTGCCGCACTCGGGGC	0.672													4	118					0	0	0.014758	0	0
BCL11A	53335	broad.mit.edu	37	2	60688844	60688844	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:60688844G>A	uc002sae.1	-	4	1431	c.1203C>T	c.(1201-1203)GGC>GGT	p.G401G	BCL11A_uc002sab.2_Silent_p.G401G|BCL11A_uc002sac.2_Intron|BCL11A_uc010ypi.1_Silent_p.G70G|BCL11A_uc010ypj.1_Silent_p.G367G|BCL11A_uc002sad.1_Silent_p.G249G|BCL11A_uc002saf.1_Silent_p.G367G	NM_022893	NP_075044	Q9H165	BC11A_HUMAN	B-cell CLL/lymphoma 11A isoform 1	401					negative regulation of axon extension|negative regulation of collateral sprouting|negative regulation of dendrite development|positive regulation of collateral sprouting|positive regulation of neuron projection development|positive regulation of transcription from RNA polymerase II promoter|protein sumoylation|regulation of dendrite development|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|cytoplasm|nucleus|nucleus	nucleic acid binding|protein heterodimerization activity|protein homodimerization activity|zinc ion binding			central_nervous_system(6)|breast(3)|ovary(2)|skin(2)	13			LUSC - Lung squamous cell carcinoma(5;9.29e-08)|Lung(5;1.34e-06)|Epithelial(17;0.0562)|all cancers(80;0.199)			AGGGCTTCTCGCCCGTGTGGC	0.607			T	IGH@	B-CLL								144	135					0	0	0.139131	0	0
STAMBP	10617	broad.mit.edu	37	2	74058084	74058084	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:74058084G>A	uc002sjs.2	+	2	151	c.101G>A	c.(100-102)CGT>CAT	p.R34H	STAMBP_uc002sjt.2_Missense_Mutation_p.R34H|STAMBP_uc002sju.2_Missense_Mutation_p.R34H|STAMBP_uc002sjv.2_Missense_Mutation_p.R34H	NM_201647	NP_964010	O95630	STABP_HUMAN	STAM binding protein	34	Interaction with CHMP3.				JAK-STAT cascade|positive regulation of cell proliferation	early endosome|membrane|nucleus	metal ion binding|metallopeptidase activity|protein binding			ovary(1)|lung(1)|breast(1)|pancreas(1)	4						ATTCCACCCCGTCGGTACTTC	0.517													85	80					0	0	0.139131	0	0
FAP	2191	broad.mit.edu	37	2	163059576	163059576	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:163059576T>C	uc002ucd.2	-	13	1335	c.1127A>G	c.(1126-1128)CAT>CGT	p.H376R	FAP_uc010zct.1_Missense_Mutation_p.H351R|FAP_uc010fpd.2_Intron	NM_004460	NP_004451	Q12884	SEPR_HUMAN	fibroblast activation protein, alpha subunit	376	Extracellular (Potential).				endothelial cell migration|negative regulation of extracellular matrix disassembly|proteolysis	cell junction|integral to membrane|invadopodium membrane|lamellipodium membrane	dipeptidyl-peptidase activity|metalloendopeptidase activity|protein homodimerization activity|serine-type endopeptidase activity			ovary(3)	3						ATAGTGAATATGTTTGTAGCC	0.363													24	34					0	0	0.125774	0	0
SCN1A	6323	broad.mit.edu	37	2	166892972	166892972	+	Silent	SNP	A	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:166892972A>G	uc010zcz.1	-	16	3000	c.2982T>C	c.(2980-2982)GAT>GAC	p.D994D	SCN1A_uc002udo.3_Silent_p.D874D|SCN1A_uc010fpk.2_Silent_p.D846D	NM_006920	NP_008851	P35498	SCN1A_HUMAN	sodium channel, voltage-gated, type I, alpha	1005	II.					voltage-gated sodium channel complex	voltage-gated sodium channel activity			ovary(6)|skin(6)|large_intestine(1)	13					Lamotrigine(DB00555)|Levetiracetam(DB01202)|Phenacemide(DB01121)|Phenytoin(DB00252)|Topiramate(DB00273)|Zonisamide(DB00909)	TTTCATTATCATCATCAGTGG	0.343													21	28					0	0	0.099896	0	0
EEF1B2	1933	broad.mit.edu	37	2	207025358	207025358	+	Missense_Mutation	SNP	A	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:207025358A>G	uc002vbf.1	+	3	285	c.127A>G	c.(127-129)AGC>GGC	p.S43G	NDUFS1_uc010ziq.1_5'Flank|NDUFS1_uc002vbe.2_5'Flank|NDUFS1_uc010zir.1_5'Flank|NDUFS1_uc010zis.1_5'Flank|NDUFS1_uc010zit.1_5'Flank|NDUFS1_uc010ziu.1_5'Flank|EEF1B2_uc002vbg.1_Missense_Mutation_p.S43G|EEF1B2_uc002vbh.1_Missense_Mutation_p.S43G|SNORD51_uc002vbi.1_5'Flank|SNORA41_uc002vbj.2_5'Flank	NM_001037663	NP_001032752	P24534	EF1B_HUMAN	eukaryotic translation elongation factor 1 beta	43	GST C-terminal.					cytosol|eukaryotic translation elongation factor 1 complex	protein binding|translation elongation factor activity				0						AGCCGTGTCCAGCCCACCGCC	0.468													3	144					0	0	0.009096	0	0
C20orf103	24141	broad.mit.edu	37	20	9496748	9496748	+	Silent	SNP	C	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr20:9496748C>G	uc002wni.1	+	3	568	c.339C>G	c.(337-339)CGC>CGG	p.R113R	C20orf103_uc010zrc.1_Intron	NM_012261	NP_036393	Q9UJQ1	CT103_HUMAN	chromosome 20 open reading frame 103 precursor	113	Extracellular (Potential).					integral to membrane				upper_aerodigestive_tract(1)|lung(1)|breast(1)	3			COAD - Colon adenocarcinoma(9;0.194)			GGGTGGATCGCGCATATGCAC	0.617													13	46					0	0	0.119110	0	0
MATN4	8785	broad.mit.edu	37	20	43933112	43933112	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr20:43933112C>T	uc002xnn.2	-	3	586	c.399G>A	c.(397-399)CCG>CCA	p.P133P	MATN4_uc002xno.2_Silent_p.P133P|MATN4_uc002xnp.2_Silent_p.P133P|MATN4_uc010zwr.1_Silent_p.P81P|MATN4_uc002xnr.1_Silent_p.P133P|RBPJL_uc002xns.2_5'Flank|RBPJL_uc002xnt.2_5'Flank	NM_003833	NP_003824	O95460	MATN4_HUMAN	matrilin 4 isoform 1 precursor	133	VWFA 1.					extracellular region	protein binding				0		Myeloproliferative disorder(115;0.0122)				GCTCCTCTGGCGGTCGCGCGC	0.716													9	15					0	0	0.080935	0	0
PIWIL3	440822	broad.mit.edu	37	22	25145722	25145722	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr22:25145722T>C	uc003abd.1	-	10	1571	c.1154A>G	c.(1153-1155)AAG>AGG	p.K385R	PIWIL3_uc011ajx.1_Missense_Mutation_p.K276R|PIWIL3_uc011ajy.1_Missense_Mutation_p.K276R|PIWIL3_uc010gut.1_Missense_Mutation_p.K385R	NM_001008496	NP_001008496	Q7Z3Z3	PIWL3_HUMAN	piwi-like 3	385	PAZ.				cell differentiation|gene silencing by RNA|meiosis|multicellular organismal development|regulation of translation|spermatogenesis	cytoplasm	RNA binding			ovary(3)|central_nervous_system(1)	4						CGTTAGGCCCTTTTTCCATCT	0.468													3	109					0	0	0.115264	0	0
EFCAB6	64800	broad.mit.edu	37	22	44178123	44178123	+	Missense_Mutation	SNP	G	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr22:44178123G>T	uc003bdy.1	-	3	291	c.76C>A	c.(76-78)CAT>AAT	p.H26N	EFCAB6_uc003bdz.1_Intron|EFCAB6_uc010gzi.1_5'UTR|EFCAB6_uc011aqa.1_5'UTR|EFCAB6_uc003bea.1_Missense_Mutation_p.H23N|EFCAB6_uc003beb.3_5'UTR	NM_022785	NP_073622	Q5THR3	EFCB6_HUMAN	CAP-binding protein complex interacting protein	26					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	calcium ion binding			ovary(3)|skin(2)|upper_aerodigestive_tract(1)|pancreas(1)	7		Ovarian(80;0.0247)|all_neural(38;0.025)				GGTGAAGAATGGGGTCTTGAA	0.373													11	198					2.23348e-06	2.41115e-06	0.146539	1	0
SI	6476	broad.mit.edu	37	3	164733006	164733006	+	Nonsense_Mutation	SNP	C	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr3:164733006C>A	uc003fei.2	-	33	3966	c.3904G>T	c.(3904-3906)GGA>TGA	p.G1302*		NM_001041	NP_001032	P14410	SUIS_HUMAN	sucrase-isomaltase	1302	Sucrase.|Lumenal.				carbohydrate metabolic process|polysaccharide digestion	apical plasma membrane|brush border|Golgi apparatus|integral to membrane	carbohydrate binding|oligo-1,6-glucosidase activity|sucrose alpha-glucosidase activity			ovary(7)|upper_aerodigestive_tract(4)|skin(2)|pancreas(1)	14		Prostate(884;0.00314)|Melanoma(1037;0.0153)|all_neural(597;0.0199)			Acarbose(DB00284)	GTTTCATTTCCTGAAATTGCT	0.348										HNSCC(35;0.089)			34	32					1.36615e-20	1.50911e-20	0.054565	1	0
ACAP2	23527	broad.mit.edu	37	3	195102638	195102638	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr3:195102638G>A	uc003fun.3	-	3	466	c.225C>T	c.(223-225)GTC>GTT	p.V75V	ACAP2_uc003fuo.2_Silent_p.V75V	NM_012287	NP_036419	Q15057	ACAP2_HUMAN	centaurin, beta 2	75	BAR.				regulation of ARF GTPase activity		ARF GTPase activator activity|zinc ion binding			large_intestine(1)|ovary(1)	2						TAACCTCAACGACAGCATCAT	0.323													7	63					0	0	0.069234	0	0
DCUN1D4	23142	broad.mit.edu	37	4	52777312	52777312	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr4:52777312T>C	uc003gze.2	+	9	825	c.692T>C	c.(691-693)CTT>CCT	p.L231P	DCUN1D4_uc003gzf.2_Intron|DCUN1D4_uc011bzn.1_Missense_Mutation_p.L171P|DCUN1D4_uc003gzg.2_RNA|DCUN1D4_uc003gzh.2_Intron|DCUN1D4_uc011bzo.1_Missense_Mutation_p.L275P	NM_001040402	NP_001035492	Q92564	DCNL4_HUMAN	DCN1, defective in cullin neddylation 1, domain	231	DCUN1.									ovary(2)	2			GBM - Glioblastoma multiforme(4;1.93e-11)|LUSC - Lung squamous cell carcinoma(32;0.00654)			ATCTGGCCCCTTTTTCCAGTT	0.383													3	181					0	0	0.021553	0	0
PPEF2	5470	broad.mit.edu	37	4	76797597	76797597	+	Missense_Mutation	SNP	C	T	T	rs140029551	byFrequency	TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr4:76797597C>T	uc003hix.2	-	11	1520	c.1163G>A	c.(1162-1164)CGG>CAG	p.R388Q	PPEF2_uc003hiy.2_RNA|PPEF2_uc003hiz.1_Missense_Mutation_p.R388Q	NM_006239	NP_006230	O14830	PPE2_HUMAN	serine/threonine protein phosphatase with	388	Catalytic.				detection of stimulus involved in sensory perception|negative regulation of MAPKKK cascade|negative regulation of peptidyl-threonine phosphorylation|protein dephosphorylation|visual perception	cytoplasm|photoreceptor inner segment|photoreceptor outer segment	calcium ion binding|Hsp70 protein binding|Hsp90 protein binding|iron ion binding|manganese ion binding|mitogen-activated protein kinase kinase kinase binding|protein serine/threonine phosphatase activity			ovary(2)|lung(1)|central_nervous_system(1)	4			Lung(101;0.0809)|LUSC - Lung squamous cell carcinoma(112;0.0934)			CCGCACCTGCCGGGAGAGCTC	0.672													17	39					0	0	0.069288	0	0
WDFY3	23001	broad.mit.edu	37	4	85639647	85639647	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr4:85639647T>C	uc003hpd.2	-	48	8090	c.7682A>G	c.(7681-7683)CAT>CGT	p.H2561R	WDFY3_uc003hpe.1_Missense_Mutation_p.H172R	NM_014991	NP_055806	Q8IZQ1	WDFY3_HUMAN	WD repeat and FYVE domain containing 3 isoform	2561						cytoplasmic part|extrinsic to membrane|nuclear envelope	1-phosphatidylinositol binding|metal ion binding|protein binding			ovary(2)|central_nervous_system(1)	3		Hepatocellular(203;0.114)		OV - Ovarian serous cystadenocarcinoma(123;0.000808)		CACATAAAAATGCTCTTTACC	0.408													72	54					0	0	0.139131	0	0
FAT4	79633	broad.mit.edu	37	4	126329750	126329750	+	Silent	SNP	A	G	G	rs145529167		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr4:126329750A>G	uc003ifj.3	+	4	5721	c.5721A>G	c.(5719-5721)GAA>GAG	p.E1907E	FAT4_uc011cgp.1_Silent_p.E205E	NM_024582	NP_078858	Q6V0I7	FAT4_HUMAN	FAT tumor suppressor homolog 4 precursor	1907	Cadherin 18.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(9)|skin(5)|upper_aerodigestive_tract(2)|pancreas(2)	18						TAGATTATGAAGTACAGCAAT	0.328													52	33					0	0	0.139131	0	0
SLC6A18	348932	broad.mit.edu	37	5	1232963	1232963	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:1232963G>A	uc003jby.1	+	3	522	c.399G>A	c.(397-399)CCG>CCA	p.P133P		NM_182632	NP_872438	Q96N87	S6A18_HUMAN	solute carrier family 6, member 18	133	Extracellular (Potential).				cellular nitrogen compound metabolic process	integral to plasma membrane	amino acid transmembrane transporter activity|neurotransmitter:sodium symporter activity			ovary(1)	1	all_cancers(3;2.99e-16)|Lung NSC(6;8.55e-15)|all_lung(6;7.2e-14)|all_epithelial(6;1.76e-10)		Epithelial(17;0.000356)|all cancers(22;0.00124)|OV - Ovarian serous cystadenocarcinoma(19;0.00239)|Lung(60;0.185)			TCCAGCACCCGCTGCCCTGGA	0.642													48	203					0	0	0.139131	0	0
FBXL7	23194	broad.mit.edu	37	5	15936915	15936915	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:15936915G>A	uc003jfn.1	+	4	1577	c.1096G>A	c.(1096-1098)GTG>ATG	p.V366M		NM_012304	NP_036436	Q9UJT9	FBXL7_HUMAN	F-box and leucine-rich repeat protein 7	366	LRR 8.				ubiquitin-dependent protein catabolic process	ubiquitin ligase complex	protein binding|ubiquitin-protein ligase activity			ovary(2)|lung(1)	3						GGTCACCGACGTGGGCATCCG	0.672													4	34					0	0	0.021553	0	0
CDH10	1008	broad.mit.edu	37	5	24537572	24537572	+	Missense_Mutation	SNP	A	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:24537572A>T	uc003jgr.1	-	3	775	c.443T>A	c.(442-444)ATC>AAC	p.I148N	CDH10_uc011cnu.1_RNA	NM_006727	NP_006718	Q9Y6N8	CAD10_HUMAN	cadherin 10, type 2 preproprotein	148	Cadherin 1.|Extracellular (Potential).				adherens junction organization|cell junction assembly|homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(6)|pancreas(4)|breast(2)	12				STAD - Stomach adenocarcinoma(35;0.0556)		ATGAATTTTGATCACAAACTC	0.418										HNSCC(23;0.051)			61	174					0	0	0.139131	0	0
EGFLAM	133584	broad.mit.edu	37	5	38407208	38407208	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:38407208C>T	uc003jlc.1	+	8	1431	c.1107C>T	c.(1105-1107)TGC>TGT	p.C369C	EGFLAM_uc003jlb.1_Silent_p.C369C|EGFLAM_uc003jle.1_Silent_p.C135C|EGFLAM_uc003jlf.1_Intron	NM_152403	NP_689616	Q63HQ2	EGFLA_HUMAN	EGF-like, fibronectin type III and laminin G	369	EGF-like 1.					cell junction|proteinaceous extracellular matrix|synapse				pancreas(3)|skin(3)|ovary(1)	7	all_lung(31;0.000385)					GCTCGCGATGCCAGTGCACCC	0.552													29	77					0	0	0.074837	0	0
DDX4	54514	broad.mit.edu	37	5	55088554	55088554	+	Nonsense_Mutation	SNP	T	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:55088554T>A	uc003jqg.3	+	17	1462	c.1388T>A	c.(1387-1389)TTA>TAA	p.L463*	DDX4_uc010ivz.2_Nonsense_Mutation_p.L443*|DDX4_uc003jqh.3_Nonsense_Mutation_p.L429*|DDX4_uc003jqj.2_Nonsense_Mutation_p.L314*	NM_001136034	NP_001129506	Q9NQI0	DDX4_HUMAN	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform	463	Helicase ATP-binding.				multicellular organismal development|sperm motility	perinuclear region of cytoplasm|pi-body|piP-body	ATP binding|ATP-dependent helicase activity|nucleic acid binding			ovary(1)|skin(1)	2		Lung NSC(810;6.93e-05)|all_neural(839;0.00409)|Prostate(74;0.0107)|Breast(144;0.0544)|Ovarian(174;0.223)				ATGAAGAAGTTAATTTCTTGC	0.358													21	215					0	0	0.134883	0	0
ADAMTS6	11174	broad.mit.edu	37	5	64569170	64569170	+	Silent	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:64569170T>C	uc003jtp.2	-	12	2431	c.1617A>G	c.(1615-1617)AAA>AAG	p.K539K	ADAMTS6_uc003jto.2_RNA|ADAMTS6_uc003jtq.2_RNA|ADAMTS6_uc003jtr.1_Silent_p.K160K	NM_197941	NP_922932	Q9UKP5	ATS6_HUMAN	ADAM metallopeptidase with thrombospondin type 1	539	Disintegrin.				proteolysis	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding				0		Lung NSC(167;2.44e-06)|Prostate(74;0.014)|Ovarian(174;0.0549)|Breast(144;0.111)|Colorectal(97;0.235)		Lung(70;0.00942)		AGCTTACCCCTTTTTCAATAT	0.408													7	717					0	0	0.069234	0	0
NSA2	10412	broad.mit.edu	37	5	74072447	74072447	+	Missense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:74072447C>T	uc003kdk.1	+	6	817	c.734C>T	c.(733-735)ACC>ATC	p.T245I		NM_014886	NP_055701	O95478	NSA2_HUMAN	NSA2 ribosome biogenesis homolog	245					rRNA processing	nucleolus|ribonucleoprotein complex				ovary(1)	1						GCCCAGGTTACCAACAATCCT	0.313													96	127					0	0	0.139131	0	0
FBXO38	81545	broad.mit.edu	37	5	147820746	147820746	+	Nonsense_Mutation	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:147820746C>T	uc003lpf.1	+	21	3454	c.3334C>T	c.(3334-3336)CGA>TGA	p.R1112*	FBXO38_uc003lpg.1_Nonsense_Mutation_p.R1037*|FBXO38_uc003lph.2_Nonsense_Mutation_p.R867*	NM_205836	NP_995308	Q6PIJ6	FBX38_HUMAN	F-box protein 38 isoform b	1112						cytoplasm|nucleus				ovary(4)|skin(2)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GAGGTCATTACGAGCTGCAGA	0.438													52	124					0	0	0.139131	0	0
DOCK2	1794	broad.mit.edu	37	5	169111328	169111328	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:169111328C>T	uc003maf.2	+	8	815	c.735C>T	c.(733-735)TAC>TAT	p.Y245Y	DOCK2_uc011der.1_RNA	NM_004946	NP_004937	Q92608	DOCK2_HUMAN	dedicator of cytokinesis 2	245					actin cytoskeleton organization|regulation of defense response to virus by virus|viral reproduction	cytoskeleton|cytosol|endomembrane system|membrane	electron carrier activity|GTP binding|GTPase binding|heme binding|Rac guanyl-nucleotide exchange factor activity|T cell receptor binding			ovary(5)|pancreas(2)	7	Renal(175;0.000159)|Lung NSC(126;0.0221)|all_lung(126;0.0337)	Medulloblastoma(196;0.0399)|all_neural(177;0.0966)	Kidney(164;7.53e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)			TGTCTCTCTACGACCCCAACA	0.493													66	198					0	0	0.139131	0	0
GRK6	2870	broad.mit.edu	37	5	176860178	176860178	+	Silent	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:176860178T>C	uc011dfz.1	+	6	631	c.471T>C	c.(469-471)CCT>CCC	p.P157P	GRK6_uc003mgp.2_Silent_p.P157P|GRK6_uc003mgq.2_Silent_p.P157P|GRK6_uc003mgs.1_Silent_p.P127P	NM_002082	NP_002073	P43250	GRK6_HUMAN	G protein-coupled receptor kinase 6 isoform B	157	N-terminal.|RGS.				regulation of G-protein coupled receptor protein signaling pathway	membrane	ATP binding|G-protein coupled receptor kinase activity|signal transducer activity			large_intestine(1)|stomach(1)|breast(1)	3	all_cancers(89;1.15e-05)|Renal(175;0.000269)|Lung NSC(126;0.000832)|all_lung(126;0.00152)	all_neural(177;0.00409)|Medulloblastoma(196;0.00498)|all_hematologic(541;0.21)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			GCGTGGCCCCTTTTGCCGACT	0.627													4	236					0	0	0.009096	0	0
CASP8AP2	9994	broad.mit.edu	37	6	90578514	90578514	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr6:90578514G>A	uc003pnr.2	+	8	5701	c.5505G>A	c.(5503-5505)AAG>AAA	p.K1835K	CASP8AP2_uc003pns.2_Intron|CASP8AP2_uc003pnt.2_Silent_p.K1835K|CASP8AP2_uc011dzz.1_Silent_p.K1835K	NM_001137667	NP_001131139	Q9UKL3	C8AP2_HUMAN	caspase 8 associated protein 2	1835	NCOA2-binding.				cell cycle|cellular response to mechanical stimulus|induction of apoptosis via death domain receptors|regulation of transcription, DNA-dependent|signal transduction|transcription, DNA-dependent	cytoplasm|nucleus	caspase activator activity|death receptor binding|transcription corepressor activity			ovary(2)	2		all_cancers(76;3.64e-09)|Prostate(29;1.16e-10)|Acute lymphoblastic leukemia(125;1.45e-10)|all_hematologic(105;7.74e-07)|all_epithelial(107;4.69e-05)|Lung NSC(302;0.238)		BRCA - Breast invasive adenocarcinoma(108;0.0953)		CTCACAAAAAGAGAAGAAACA	0.343													7	10					0	0	0.038147	0	0
DPY19L1	23333	broad.mit.edu	37	7	34997678	34997678	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr7:34997678G>A	uc003tem.3	-	11	1023	c.878C>T	c.(877-879)TCT>TTT	p.S293F		NM_015283	NP_056098	Q2PZI1	D19L1_HUMAN	dpy-19-like 1	293	Helical; (Potential).					integral to membrane					0						AAGTGCAAGAGAAATCTGGAA	0.279													20	16					0	0	0.055883	0	0
ZNF479	90827	broad.mit.edu	37	7	57187809	57187809	+	Missense_Mutation	SNP	T	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr7:57187809T>G	uc010kzo.2	-	5	1584	c.1313A>C	c.(1312-1314)AAA>ACA	p.K438T		NM_033273	NP_150376	Q96JC4	ZN479_HUMAN	zinc finger protein 479	438	C2H2-type 10.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			ovary(3)|skin(1)	4			GBM - Glioblastoma multiforme(1;9.18e-12)			TTCTTCACATTTGTAGGGTCT	0.453													7	158					0	0	0.029380	0	0
TPK1	27010	broad.mit.edu	37	7	144288534	144288534	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr7:144288534C>T	uc003weq.2	-	7	586	c.483G>A	c.(481-483)CTG>CTA	p.L161L	TPK1_uc003weo.2_Intron|TPK1_uc003wep.2_RNA|TPK1_uc003wer.2_Intron|TPK1_uc003wes.2_RNA	NM_022445	NP_071890	Q9H3S4	TPK1_HUMAN	thiamin pyrophosphokinase 1 isoform a	161					thiamine diphosphate biosynthetic process	cytosol	ATP binding|kinase activity|thiamine diphosphokinase activity			ovary(2)	2					Thiamine(DB00152)	GCAGGTAGATCAGCGATTCCT	0.423													117	145					0	0	0.139131	0	0
MSR1	4481	broad.mit.edu	37	8	16021583	16021583	+	Missense_Mutation	SNP	A	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr8:16021583A>T	uc003wwz.2	-	5	1006	c.808T>A	c.(808-810)TTA>ATA	p.L270I	MSR1_uc010lsu.2_Missense_Mutation_p.L288I|MSR1_uc003wxa.2_Missense_Mutation_p.L270I|MSR1_uc003wxb.2_Missense_Mutation_p.L270I|MSR1_uc011kxz.1_Missense_Mutation_p.L44I	NM_138715	NP_619729	P21757	MSRE_HUMAN	macrophage scavenger receptor 1 isoform type 1	270	Extracellular (Potential).				cholesterol transport|plasma lipoprotein particle clearance|positive regulation of cholesterol storage|positive regulation of macrophage derived foam cell differentiation|receptor-mediated endocytosis	collagen|integral to plasma membrane|low-density lipoprotein particle	low-density lipoprotein particle binding|protein binding|scavenger receptor activity			ovary(1)	1				Colorectal(111;0.00475)|COAD - Colon adenocarcinoma(73;0.0164)		CCTTGAATTAAAGTGATATTT	0.303													33	62					0	0	0.104719	0	0
SLC7A2	6542	broad.mit.edu	37	8	17406213	17406213	+	Missense_Mutation	SNP	T	C	C			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr8:17406213T>C	uc011kyc.1	+	4	728	c.559T>C	c.(559-561)TCT>CCT	p.S187P	SLC7A2_uc011kyd.1_Missense_Mutation_p.S227P|SLC7A2_uc011kye.1_Missense_Mutation_p.S227P|SLC7A2_uc011kyf.1_Missense_Mutation_p.S187P	NM_001008539	NP_001008539	P52569	CTR2_HUMAN	solute carrier family 7, member 2 isoform 2	187	Cytoplasmic (Potential).				cellular amino acid metabolic process|ion transport	cytoplasm|integral to plasma membrane|membrane fraction	basic amino acid transmembrane transporter activity			ovary(2)|skin(1)	3				Colorectal(111;0.0577)|COAD - Colon adenocarcinoma(73;0.216)	L-Lysine(DB00123)|L-Ornithine(DB00129)	AGTAAAAGAGTCTGCTTGGGT	0.373													76	155					0	0	0.139131	0	0
GEM	2669	broad.mit.edu	37	8	95262715	95262715	+	Missense_Mutation	SNP	C	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr8:95262715C>A	uc003ygj.2	-	5	963	c.714G>T	c.(712-714)CAG>CAT	p.Q238H	GEM_uc003ygi.2_Missense_Mutation_p.Q238H	NM_005261	NP_005252	P55040	GEM_HUMAN	GTP-binding mitogen-induced T-cell protein	238					cell surface receptor linked signaling pathway|immune response|small GTPase mediated signal transduction	internal side of plasma membrane	calmodulin binding|GDP binding|GTP binding|GTPase activity|magnesium ion binding			lung(1)	1	Breast(36;4.65e-06)	Myeloproliferative disorder(644;0.204)	BRCA - Breast invasive adenocarcinoma(8;0.00691)			GAAGGCGCACCTGTCGCACAA	0.582													67	71					1.30681e-28	1.46055e-28	0.139131	1	0
FAM135B	51059	broad.mit.edu	37	8	139164785	139164785	+	Missense_Mutation	SNP	T	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr8:139164785T>G	uc003yuy.2	-	13	2104	c.1933A>C	c.(1933-1935)AGT>CGT	p.S645R	FAM135B_uc003yux.2_Missense_Mutation_p.S546R|FAM135B_uc003yuz.2_RNA|FAM135B_uc003yva.2_Missense_Mutation_p.S207R|FAM135B_uc003yvb.2_Missense_Mutation_p.S207R	NM_015912	NP_056996	Q49AJ0	F135B_HUMAN	hypothetical protein LOC51059	645										ovary(7)|skin(2)	9	all_epithelial(106;8.29e-14)|Lung NSC(106;6.88e-06)|all_lung(105;1.44e-05)|Ovarian(258;0.00672)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.0805)			AGGGTAGAACTTAGTGGATCA	0.488										HNSCC(54;0.14)			41	112					0	0	0.139131	0	0
FLJ43860	389690	broad.mit.edu	37	8	142451278	142451278	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr8:142451278G>A	uc003ywi.2	-	25	3124	c.3043C>T	c.(3043-3045)CGT>TGT	p.R1015C	FLJ43860_uc011ljs.1_RNA|FLJ43860_uc010meu.1_RNA	NM_207414	NP_997297	Q6ZUA9	Q6ZUA9_HUMAN	hypothetical protein LOC389690	1015							binding				0	all_cancers(97;7.79e-15)|all_epithelial(106;4.52e-13)|Lung NSC(106;2.07e-05)|all_lung(105;2.89e-05)|Ovarian(258;0.0303)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.0493)			TTCCTCTCACGCTCCTGTGGG	0.637													34	28					0	0	0.086207	0	0
IFNA16	3449	broad.mit.edu	37	9	21217066	21217066	+	Missense_Mutation	SNP	A	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:21217066A>T	uc003zor.1	-	1	245	c.239T>A	c.(238-240)TTC>TAC	p.F80Y	IFNA14_uc003zoo.1_Intron	NM_002173	NP_002164	P05015	IFN16_HUMAN	interferon, alpha 16 precursor	80					blood coagulation|regulation of type I interferon-mediated signaling pathway|response to virus|type I interferon-mediated signaling pathway	extracellular space	cytokine activity|interferon-alpha/beta receptor binding			skin(1)	1				Lung(24;2.12e-22)|LUSC - Lung squamous cell carcinoma(38;1.4e-13)|OV - Ovarian serous cystadenocarcinoma(39;0.116)		CATCTCATGGAAGGCAGAGAT	0.468													115	14					0	0	0.139131	0	0
ELAVL2	1993	broad.mit.edu	37	9	23701589	23701589	+	Silent	SNP	A	G	G			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:23701589A>G	uc003zpu.2	-	5	776	c.501T>C	c.(499-501)GGT>GGC	p.G167G	ELAVL2_uc003zps.2_Silent_p.G167G|ELAVL2_uc003zpt.2_Silent_p.G167G|ELAVL2_uc003zpv.2_Silent_p.G167G|ELAVL2_uc003zpw.2_Silent_p.G167G	NM_004432	NP_004423	Q12926	ELAV2_HUMAN	ELAV (embryonic lethal, abnormal vision,	167	RRM 2.				regulation of transcription, DNA-dependent		mRNA 3'-UTR binding|nucleotide binding|protein binding	p.G167D(1)		ovary(2)|central_nervous_system(1)	3				GBM - Glioblastoma multiforme(1;2.18e-156)|Lung(42;2.15e-28)|LUSC - Lung squamous cell carcinoma(38;1.02e-19)		TAAACCCTACACCCCTTGATA	0.438													5	107					0	0	0.029380	0	0
ALDH1B1	219	broad.mit.edu	37	9	38396134	38396134	+	Missense_Mutation	SNP	C	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:38396134C>A	uc004aay.2	+	2	501	c.389C>A	c.(388-390)CCT>CAT	p.P130H		NM_000692	NP_000683	P30837	AL1B1_HUMAN	aldehyde dehydrogenase 1B1 precursor	130					carbohydrate metabolic process	mitochondrial matrix|nucleus	aldehyde dehydrogenase (NAD) activity			skin(1)	1				GBM - Glioblastoma multiforme(29;0.043)|Lung(182;0.115)	NADH(DB00157)	AATGGGAAGCCTTTCCAAGAG	0.577													80	262					4.82855e-46	5.59406e-46	0.139131	1	0
DAPK1	1612	broad.mit.edu	37	9	90321631	90321631	+	Silent	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:90321631G>A	uc004apc.2	+	26	3783	c.3645G>A	c.(3643-3645)GTG>GTA	p.V1215V	DAPK1_uc004apd.2_Silent_p.V1215V|DAPK1_uc011ltg.1_Silent_p.V1149V|DAPK1_uc011lth.1_Silent_p.V952V|DAPK1_uc004apg.2_Silent_p.V192V	NM_004938	NP_004929	P53355	DAPK1_HUMAN	death-associated protein kinase 1	1215					apoptosis|induction of apoptosis by extracellular signals|intracellular protein kinase cascade	actin cytoskeleton|cytoplasm	ATP binding|calmodulin binding|protein serine/threonine kinase activity			ovary(1)|breast(1)	2						TGGACTCGGTGTGCAGCACCA	0.642									Chronic_Lymphocytic_Leukemia_Familial_Clustering_of				3	32					0	0	0.115264	0	0
ZBTB43	23099	broad.mit.edu	37	9	129595533	129595533	+	Missense_Mutation	SNP	G	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:129595533G>A	uc004bql.2	+	3	1018	c.745G>A	c.(745-747)GAG>AAG	p.E249K	ZBTB43_uc010mxf.2_Missense_Mutation_p.E249K	NM_014007	NP_054726	O43298	ZBT43_HUMAN	zinc finger and BTB domain containing 43	249					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			ovary(1)	1						CGTGAAGCCCGAGCGCTTAGA	0.617													18	6					0	0	0.062417	0	0
COL5A1	1289	broad.mit.edu	37	9	137650106	137650106	+	Silent	SNP	C	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr9:137650106C>T	uc004cfe.2	+	18	2281	c.1899C>T	c.(1897-1899)GAC>GAT	p.D633D		NM_000093	NP_000084	P20908	CO5A1_HUMAN	alpha 1 type V collagen preproprotein	633	Triple-helical region.				axon guidance|cell adhesion|collagen biosynthetic process|collagen fibril organization|eye morphogenesis|fibril organization|integrin biosynthetic process|skin development|wound healing, spreading of epidermal cells	collagen type V	heparin binding|integrin binding|platelet-derived growth factor binding|proteoglycan binding			skin(4)|ovary(3)|pancreas(2)|central_nervous_system(1)|kidney(1)	11		Myeloproliferative disorder(178;0.0341)		all cancers(34;2.28e-08)|OV - Ovarian serous cystadenocarcinoma(145;6.03e-08)|Epithelial(140;6.4e-08)|GBM - Glioblastoma multiforme(294;0.131)		GGGGTTTCGACGGCCTGGCTG	0.627													67	10					0	0	0.139131	0	0
SLC9A7	84679	broad.mit.edu	37	X	46466517	46466517	+	Missense_Mutation	SNP	G	A	A	rs146808441		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chrX:46466517G>A	uc004dgu.1	-	17	2056	c.2048C>T	c.(2047-2049)ACG>ATG	p.T683M		NM_032591	NP_115980	Q96T83	SL9A7_HUMAN	solute carrier family 9, member 7	683					regulation of pH	Golgi membrane|integral to membrane|recycling endosome membrane|trans-Golgi network	potassium:hydrogen antiporter activity|protein homodimerization activity|sodium:hydrogen antiporter activity			ovary(2)	2						CTCCAGACTCGTGGAGGCGGT	0.602													38	2					0	0	0.131918	0	0
PCP4L1	654790	broad.mit.edu	37	1	161254154	161254156	+	In_Frame_Del	DEL	GGA	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr1:161254154_161254156delGGA	uc001gad.2	+	3	338_340	c.90_92delGGA	c.(88-93)GCGGAG>GCG	p.E35del		NM_001102566	NP_001096036	A6NKN8	PC4L1_HUMAN	Purkinje cell protein 4 like 1	35											0	all_cancers(52;4.16e-18)|all_hematologic(112;0.093)		BRCA - Breast invasive adenocarcinoma(70;0.00376)			TCAAGAAGGCGGAGGAGGAGGAG	0.488													8	382	---	---	---	---					
PTEN	5728	broad.mit.edu	37	10	89693002	89693003	+	Frame_Shift_Ins	INS	-	A	A			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:89693002_89693003insA	uc001kfb.2	+	6	1517_1518	c.486_487insA	c.(484-489)GACAAAfs	p.D162fs		NM_000314	NP_000305	P60484	PTEN_HUMAN	phosphatase and tensin homolog	162_163	Phosphatase tensin-type.				activation of mitotic anaphase-promoting complex activity|apoptosis|canonical Wnt receptor signaling pathway|cell proliferation|central nervous system development|induction of apoptosis|inositol phosphate dephosphorylation|negative regulation of cell migration|negative regulation of cyclin-dependent protein kinase activity involved in G1/S|negative regulation of focal adhesion assembly|negative regulation of G1/S transition of mitotic cell cycle|negative regulation of protein kinase B signaling cascade|negative regulation of protein phosphorylation|nerve growth factor receptor signaling pathway|phosphatidylinositol dephosphorylation|phosphatidylinositol-mediated signaling|positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process|positive regulation of sequence-specific DNA binding transcription factor activity|protein stabilization|regulation of neuron projection development|T cell receptor signaling pathway	cytosol|internal side of plasma membrane|PML body	anaphase-promoting complex binding|enzyme binding|inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity|lipid binding|magnesium ion binding|PDZ domain binding|phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity|phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity|phosphatidylinositol-3-phosphatase activity|protein serine/threonine phosphatase activity|protein tyrosine phosphatase activity|protein tyrosine/serine/threonine phosphatase activity	p.R55fs*1(4)|p.?(2)|p.Y27fs*1(2)|p.Y27_N212>Y(2)|p.D162G(1)|p.D162H(1)|p.D162V(1)|p.F56fs*2(1)|p.D162fs*8(1)		endometrium(831)|central_nervous_system(657)|skin(121)|haematopoietic_and_lymphoid_tissue(101)|large_intestine(99)|prostate(97)|breast(73)|lung(65)|ovary(58)|thyroid(29)|stomach(29)|upper_aerodigestive_tract(25)|cervix(24)|liver(20)|vulva(17)|kidney(15)|NS(14)|soft_tissue(13)|urinary_tract(12)|eye(8)|pancreas(6)|salivary_gland(5)|bone(5)|biliary_tract(4)|autonomic_ganglia(2)|meninges(2)|testis(1)|oesophagus(1)	2334		all_cancers(4;3.61e-31)|all_epithelial(4;3.96e-23)|Prostate(4;8.12e-23)|Breast(4;0.000111)|Melanoma(5;0.00146)|all_hematologic(4;0.00227)|Colorectal(252;0.00494)|all_neural(4;0.00513)|Acute lymphoblastic leukemia(4;0.0116)|Glioma(4;0.0274)|all_lung(38;0.132)	KIRC - Kidney renal clear cell carcinoma(1;0.214)	UCEC - Uterine corpus endometrioid carcinoma (6;0.000228)|all cancers(1;4.16e-84)|GBM - Glioblastoma multiforme(1;7.77e-49)|Epithelial(1;7.67e-41)|OV - Ovarian serous cystadenocarcinoma(1;6.22e-15)|BRCA - Breast invasive adenocarcinoma(1;1.1e-06)|Lung(2;3.18e-06)|Colorectal(12;4.88e-06)|LUSC - Lung squamous cell carcinoma(2;4.97e-06)|COAD - Colon adenocarcinoma(12;1.13e-05)|Kidney(1;0.000288)|KIRC - Kidney renal clear cell carcinoma(1;0.00037)|STAD - Stomach adenocarcinoma(243;0.218)		GGACCAGAGACAAAAAGGTAAG	0.332		31	D|Mis|N|F|S		glioma| prostate|endometrial	harmartoma|glioma| prostate|endometrial			Proteus_syndrome|Cowden_syndrome|Juvenile_Polyposis|Hereditary_Mixed_Polyposis_Syndrome_type_1|Bannayan-Riley-Ruvalcaba_syndrome	HNSCC(9;0.0022)|TCGA GBM(2;<1E-08)|TSP Lung(26;0.18)			43	8	---	---	---	---					
HPS1	3257	broad.mit.edu	37	10	100186987	100186987	+	Frame_Shift_Del	DEL	G	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr10:100186987delG	uc010qpf.1	-	11	1218	c.972delC	c.(970-972)CCCfs	p.P324fs	HPS1_uc001kpi.1_Frame_Shift_Del_p.P324fs|HPS1_uc001kpj.1_Frame_Shift_Del_p.P231fs|HPS1_uc001kpk.1_Frame_Shift_Del_p.P204fs|HPS1_uc010qpg.1_5'Flank|HPS1_uc009xwb.2_RNA|HPS1_uc010qph.1_Frame_Shift_Del_p.P324fs	NM_000195	NP_000186	Q92902	HPS1_HUMAN	Hermansky-Pudlak syndrome 1 protein isoform a	324					lysosome organization|response to stimulus|visual perception	cytoplasmic membrane-bounded vesicle|integral to plasma membrane|lysosome|membrane fraction|soluble fraction	protein dimerization activity			skin(1)	1		Colorectal(252;0.234)		Epithelial(162;3.87e-12)|all cancers(201;5.63e-10)		GGGCATCCATGGGGGGGGTGC	0.572									Hermansky-Pudlak_syndrome				2	4	---	---	---	---					
ZCCHC14	23174	broad.mit.edu	37	16	87445976	87445979	+	Frame_Shift_Del	DEL	GCAG	-	-	rs143691635		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr16:87445976_87445979delGCAG	uc002fjz.1	-	12	1964_1967	c.1937_1940delCTGC	c.(1936-1941)CCTGCTfs	p.P646fs	ZCCHC14_uc002fka.1_RNA|ZCCHC14_uc002fkb.2_Frame_Shift_Del_p.P422fs	NM_015144	NP_055959	Q8WYQ9	ZCH14_HUMAN	zinc finger, CCHC domain containing 14	646_647					cell communication		nucleic acid binding|phosphatidylinositol binding|zinc ion binding			upper_aerodigestive_tract(1)|breast(1)	2				BRCA - Breast invasive adenocarcinoma(80;0.0285)		GGCAGAATCAGCAGGAACAGATGA	0.583													73	325	---	---	---	---					
FANCA	2175	broad.mit.edu	37	16	89806404	89806405	+	Frame_Shift_Del	DEL	CT	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr16:89806404_89806405delCT	uc002fou.1	-	39	3973_3974	c.3931_3932delAG	c.(3931-3933)AGTfs	p.S1311fs	ZNF276_uc010ciq.2_3'UTR|ZNF276_uc002foq.3_3'UTR|ZNF276_uc010cir.2_RNA|ZNF276_uc002for.3_3'UTR|ZNF276_uc010cis.2_3'UTR|ZNF276_uc002fos.3_3'UTR|ZNF276_uc002fot.3_RNA|ZNF276_uc010vpm.1_3'UTR|FANCA_uc010vpn.1_Frame_Shift_Del_p.S1311fs|FANCA_uc010vpo.1_Frame_Shift_Del_p.S397fs	NM_000135	NP_000126	O15360	FANCA_HUMAN	Fanconi anemia, complementation group A isoform	1311					DNA repair|protein complex assembly	cytoplasm|nucleoplasm	protein binding			ovary(2)|breast(2)|central_nervous_system(1)|skin(1)	6		Lung NSC(15;8.48e-06)|all_lung(18;1.31e-05)|all_hematologic(23;0.0194)		BRCA - Breast invasive adenocarcinoma(80;0.028)		TTTCTTACCACTCTCTGTCAAC	0.510			D|Mis|N|F|S			AML|leukemia		Involved_in_tolerance_or_repair_of_DNA_crosslinks	Fanconi_Anemia				70	214	---	---	---	---					
MYO1C	4641	broad.mit.edu	37	17	1378283	1378284	+	Frame_Shift_Ins	INS	-	T	T			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:1378283_1378284insT	uc002fsp.2	-	15	1837_1838	c.1617_1618insA	c.(1615-1620)CGAGGGfs	p.R539fs	MYO1C_uc002fsn.2_Frame_Shift_Ins_p.R520fs|MYO1C_uc002fso.2_Frame_Shift_Ins_p.R504fs|MYO1C_uc010vqj.1_Frame_Shift_Ins_p.R504fs|MYO1C_uc010vqk.1_Frame_Shift_Ins_p.R515fs	NM_001080779	NP_001074248	O00159	MYO1C_HUMAN	myosin IC isoform a	539_540	Myosin head-like.				mRNA transport|protein transport|transmembrane transport	basal plasma membrane|cytoplasm|filamentous actin|lateral plasma membrane|nuclear pore|nucleolus|nucleoplasm|stereocilium membrane	actin binding|ATP binding|calmodulin binding|motor activity				0				UCEC - Uterine corpus endometrioid carcinoma (25;0.0822)		CGGAATTCCCCTCGGCCCAGAG	0.668													2	4	---	---	---	---					
DNAH9	1770	broad.mit.edu	37	17	11837333	11837333	+	Frame_Shift_Del	DEL	C	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:11837333delC	uc002gne.2	+	65	12502	c.12434delC	c.(12433-12435)TCTfs	p.S4145fs	DNAH9_uc010coo.2_Frame_Shift_Del_p.S3363fs|DNAH9_uc002gnf.2_Frame_Shift_Del_p.S457fs	NM_001372	NP_001363	Q9NYC9	DYH9_HUMAN	dynein, axonemal, heavy chain 9 isoform 2	4145					cell projection organization|cellular component movement|microtubule-based movement|spermatogenesis	axonemal dynein complex|cilium axoneme|cytoplasm|microtubule	ATP binding|ATPase activity|microtubule motor activity			skin(10)|ovary(4)|breast(3)|central_nervous_system(2)|pancreas(1)	20		Breast(5;0.0122)|all_epithelial(5;0.131)		Colorectal(4;6.88e-05)|COAD - Colon adenocarcinoma(4;0.000813)|READ - Rectum adenocarcinoma(10;0.157)		GGAGAACTGTCTTTGGCCCCA	0.502													73	147	---	---	---	---					
NF1	4763	broad.mit.edu	37	17	29553542	29553542	+	Frame_Shift_Del	DEL	C	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr17:29553542delC	uc002hgg.2	+	18	2424	c.2091delC	c.(2089-2091)AACfs	p.N697fs	NF1_uc002hgh.2_Frame_Shift_Del_p.N697fs|NF1_uc010csn.1_Frame_Shift_Del_p.N557fs|NF1_uc002hgi.1_5'UTR	NM_001042492	NP_001035957	P21359	NF1_HUMAN	neurofibromin isoform 1	697					actin cytoskeleton organization|adrenal gland development|artery morphogenesis|camera-type eye morphogenesis|cerebral cortex development|collagen fibril organization|forebrain astrocyte development|forebrain morphogenesis|heart development|liver development|MAPKKK cascade|metanephros development|myelination in peripheral nervous system|negative regulation of cell migration|negative regulation of endothelial cell proliferation|negative regulation of MAP kinase activity|negative regulation of MAPKKK cascade|negative regulation of neuroblast proliferation|negative regulation of oligodendrocyte differentiation|negative regulation of transcription factor import into nucleus|osteoblast differentiation|phosphatidylinositol 3-kinase cascade|pigmentation|positive regulation of adenylate cyclase activity|positive regulation of neuron apoptosis|Ras protein signal transduction|regulation of blood vessel endothelial cell migration|regulation of bone resorption|response to hypoxia|smooth muscle tissue development|spinal cord development|sympathetic nervous system development|visual learning|wound healing	axon|cytoplasm|dendrite|intrinsic to internal side of plasma membrane|nucleus	protein binding|Ras GTPase activator activity	p.?(2)		soft_tissue(159)|central_nervous_system(56)|lung(28)|large_intestine(27)|haematopoietic_and_lymphoid_tissue(18)|ovary(18)|autonomic_ganglia(12)|breast(3)|skin(3)|stomach(2)|thyroid(1)|prostate(1)|kidney(1)|pancreas(1)	330		all_cancers(10;1.29e-12)|all_epithelial(10;0.00347)|all_hematologic(16;0.00556)|Acute lymphoblastic leukemia(14;0.00593)|Breast(31;0.014)|Myeloproliferative disorder(56;0.0255)|all_lung(9;0.0321)|Lung NSC(157;0.0659)		UCEC - Uterine corpus endometrioid carcinoma (4;4.38e-05)|all cancers(4;1.64e-26)|Epithelial(4;9.15e-23)|OV - Ovarian serous cystadenocarcinoma(4;3.58e-21)|GBM - Glioblastoma multiforme(4;0.00146)		TTCTGTGGAACCCTGACACTG	0.542			D|Mis|N|F|S|O		neurofibroma|glioma	neurofibroma|glioma			Neurofibromatosis_type_1	TCGA GBM(6;<1E-08)|TSP Lung(7;0.0071)|TCGA Ovarian(3;0.0088)			113	44	---	---	---	---					
GATA6	2627	broad.mit.edu	37	18	19752073	19752075	+	In_Frame_Del	DEL	ACC	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr18:19752073_19752075delACC	uc002ktt.1	+	2	1233_1235	c.968_970delACC	c.(967-972)TACCAC>TAC	p.H333del	GATA6_uc002ktu.1_In_Frame_Del_p.H333del	NM_005257	NP_005248	Q92908	GATA6_HUMAN	GATA binding protein 6	333	Poly-His.				blood coagulation|cardiac vascular smooth muscle cell differentiation|cellular response to hypoxia|intestinal epithelial cell differentiation|male gonad development|negative regulation of apoptosis|negative regulation of transcription from RNA polymerase II promoter|negative regulation of transforming growth factor-beta1 production|negative regulation of transforming growth factor-beta2 production|outflow tract septum morphogenesis|positive regulation of angiogenesis|positive regulation of cell cycle arrest|positive regulation of transcription from RNA polymerase II promoter|response to drug|response to growth factor stimulus		protein binding|protein kinase binding|sequence-specific DNA binding transcription factor activity|transcription factor binding|transcription regulatory region DNA binding|zinc ion binding			central_nervous_system(3)	3	all_cancers(21;0.00271)|all_epithelial(16;7.31e-05)|Ovarian(2;0.116)|Lung NSC(20;0.123)|all_lung(20;0.246)		STAD - Stomach adenocarcinoma(5;0.106)			AACGGGACGTaccaccaccacca	0.650													2	4	---	---	---	---					
NUCB1	4924	broad.mit.edu	37	19	49425109	49425111	+	In_Frame_Del	DEL	AGC	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr19:49425109_49425111delAGC	uc002plb.3	+	12	1271_1273	c.1199_1201delAGC	c.(1198-1203)AAGCAG>AAG	p.Q407del	NUCB1_uc002plc.2_In_Frame_Del_p.Q407del|NUCB1_uc002pld.2_In_Frame_Del_p.Q70del	NM_006184	NP_006175	Q02818	NUCB1_HUMAN	nucleobindin 1 precursor	407	Potential.|Poly-Gln.					ER-Golgi intermediate compartment|extracellular space|Golgi apparatus|membrane|microtubule cytoskeleton	calcium ion binding|DNA binding				0		all_lung(116;4.89e-05)|Lung NSC(112;8.3e-05)|all_epithelial(76;8.64e-05)|all_neural(266;0.0506)|Ovarian(192;0.113)		OV - Ovarian serous cystadenocarcinoma(262;0.000171)|all cancers(93;0.000333)|Epithelial(262;0.0174)|GBM - Glioblastoma multiforme(486;0.0244)		Gagcagcggaagcagcagcagca	0.522													8	155	---	---	---	---					
PTPN18	26469	broad.mit.edu	37	2	131129929	131129934	+	In_Frame_Del	DEL	GACGGG	-	-	rs112040677		TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr2:131129929_131129934delGACGGG	uc002trc.2	+	13	1214_1219	c.1113_1118delGACGGG	c.(1111-1119)CAGACGGGG>CAG	p.TG378del	PTPN18_uc002trd.2_In_Frame_Del_p.TG357del|PTPN18_uc002trb.2_In_Frame_Del_p.TG271del|PTPN18_uc002tre.2_In_Frame_Del_p.TG29del	NM_014369	NP_055184	Q99952	PTN18_HUMAN	protein tyrosine phosphatase, non-receptor type	378_379				Missing (in Ref. 1; CAA56105).		cytoplasm|nucleus	non-membrane spanning protein tyrosine phosphatase activity			ovary(3)|kidney(1)	4	Colorectal(110;0.1)					gtgggacgcagacggggacggggacg	0.568													3	4	---	---	---	---					
MICAL3	57553	broad.mit.edu	37	22	18314825	18314827	+	In_Frame_Del	DEL	CTC	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr22:18314825_18314827delCTC	uc002zng.3	-	21	3201_3203	c.2848_2850delGAG	c.(2848-2850)GAGdel	p.E950del	MICAL3_uc011agl.1_In_Frame_Del_p.E950del	NM_015241	NP_056056	Q7RTP6	MICA3_HUMAN	microtubule associated monoxygenase, calponin	950	Glu-rich.					cytoplasm|cytoskeleton	monooxygenase activity|zinc ion binding				0		all_epithelial(15;0.198)		Lung(27;0.0427)		GCAGGCGAGGctcctcctcctcc	0.453													7	41	---	---	---	---					
VCAN	1462	broad.mit.edu	37	5	82816057	82816057	+	Frame_Shift_Del	DEL	T	-	-			TCGA-FW-A3I3-06A-11D-A21A-08	TCGA-FW-A3I3-10A-01D-A21A-08									Somatic	Phase_I	Capture				Illumina GAIIx	b8fd25d1-50ab-411d-808f-99c7ab5204e8	adb99082-b96d-44ec-a501-42b05ca8dd7c	g.chr5:82816057delT	uc003kii.3	+	7	2288	c.1932delT	c.(1930-1932)CCTfs	p.P644fs	VCAN_uc003kij.3_Intron|VCAN_uc010jau.2_Frame_Shift_Del_p.P644fs|VCAN_uc003kik.3_Intron	NM_004385	NP_004376	P13611	CSPG2_HUMAN	versican isoform 1 precursor	644	GAG-alpha (glucosaminoglycan attachment domain).				cell adhesion|cell recognition|glial cell migration	extracellular space|proteinaceous extracellular matrix	calcium ion binding|hyaluronic acid binding|sugar binding			ovary(7)|skin(6)|lung(2)|central_nervous_system(1)	16		Lung NSC(167;0.0216)|all_lung(232;0.0251)|Ovarian(174;0.142)		OV - Ovarian serous cystadenocarcinoma(54;2.47e-41)|Epithelial(54;2.51e-34)|all cancers(79;5.19e-29)		CTACTACACCTTTTCCATCAC	0.368													8	849	---	---	---	---					
