Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-AG-3887-10A-01D-1115-02	79732bb4-4acb-47d0-95c0-38d934c99f0d	TCGA-AG-3887-01A-01D-1115-02_TCGA-AG-3887-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3885-10A-01D-0957-02	3b4d9a4e-e094-4c6d-b5a1-606cf549443f	TCGA-AG-3885-01A-01D-0957-02_TCGA-AG-3885-10A-01D-0957-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3878-10A-01D-1167-02	3a5cb7a1-ab43-4c31-afae-98a3bf30f091	TCGA-AG-3878-01A-02D-1167-02_A80A1YABXX---TCGA-AG-3878-10A-01D-1167-02_A80A1YABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3898-10A-01D-1115-02	b12a19e2-25cf-414f-ba42-396566c2a486	TCGA-AG-3898-01A-01D-1115-02_TCGA-AG-3898-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-4005-10A-01D-1115-02	703f6ca3-4393-4199-86ee-b3fbfe1fd121	TCGA-AG-4005-01A-01D-1115-02_TCGA-AG-4005-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3890-10A-01D-1115-02	b0da3675-fa73-4bc9-9e24-63a31968fdcb	TCGA-AG-3890-01A-01D-1115-02_TCGA-AG-3890-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-4007-10A-01D-1115-02	a7a0117e-4ba7-4ab2-b390-f77472d2f2b5	TCGA-AG-4007-01A-01D-1115-02_TCGA-AG-4007-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AF-2691-10A-01D-1167-02	6e66f7da-5ab7-4769-b367-1cfdfe3d058a	TCGA-AF-2691-01A-01D-1167-02_A802RUABXX---TCGA-AF-2691-10A-01D-1167-02_A802RUABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-4015-10A-01D-1115-02	f7c39024-56ca-4778-9225-6e2423426413	TCGA-AG-4015-01A-01D-1115-02_TCGA-AG-4015-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3727-10A-01D-0957-02	0f5e8079-ed89-4cf3-a882-915c72793b6f	TCGA-AG-3727-01A-01D-1167-02_merged---TCGA-AG-3727-10A-01D-0957-02_merged---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A032-10A-01D-A078-02	549b9dfe-21e5-4a0b-bee5-f8c71adeaca2	TCGA-AG-A032-01A-01D-A077-02_TCGA-AG-A032-10A-01D-A078-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3892-10A-01D-1115-02	13881e1c-77c0-4063-a39d-98036aba6fe8	TCGA-AG-3892-01A-01D-1115-02_TCGA-AG-3892-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A002-10A-01D-A078-02	26e7a890-3de3-486f-91ab-c76f14908f1c	TCGA-AG-A002-01A-01D-A077-02_B81CLKABXX---TCGA-AG-A002-10A-01D-A078-02_B81CLKABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A008-10A-01D-A078-02	2ceb5daf-1fa5-4163-82ef-8304514d8d9a	TCGA-AG-A008-01A-01D-A077-02_B81CLKABXX---TCGA-AG-A008-10A-01D-A078-02_B81CLKABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A01N-10A-01D-A078-02	d585fd9d-b88a-44f3-9672-2e0c067c78bf	TCGA-AG-A01N-01A-01D-A077-02_B818URABXX---TCGA-AG-A01N-10A-01D-A078-02_B818URABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3893-10A-01D-1115-02	e815b25f-95e5-4ac6-96d0-cb4bb686e712	TCGA-AG-3893-01A-01D-1115-02_TCGA-AG-3893-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3894-10A-01D-1115-02	6b64df2f-f727-46e7-bd39-518d8d68f796	TCGA-AG-3894-01A-01D-1115-02_TCGA-AG-3894-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3896-10A-01D-1115-02	08deacda-23df-416a-8235-e5342322d44f	TCGA-AG-3896-01A-01D-1115-02_TCGA-AG-3896-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A01W-11A-11D-A079-02	7897a8d4-72be-4c87-bade-523fcdbbefbd	TCGA-AG-A01W-01A-21D-A079-02_TCGA-AG-A01W-11A-11D-A079-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A00Y-10A-01D-A078-02	49ebf21c-8481-4d18-bf18-81a24a168fca	TCGA-AG-A00Y-01A-02D-A077-02_BB0BM5ABXX---TCGA-AG-A00Y-10A-01D-A078-02_BB0BM5ABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3881-10A-01D-0957-02	0a10ae32-fa2c-45e1-8e02-ed0dacd72ed1	TCGA-AG-3881-01A-01D-0957-02_TCGA-AG-3881-10A-01D-0957-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-4001-10A-01D-1115-02	d5159d6f-6342-4d19-b7f2-35301995017a	TCGA-AG-4001-01A-02D-1115-02_TCGA-AG-4001-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AF-3913-11A-01D-1115-02	a5cc1277-d1b0-4662-97fc-84a21ad24cff	TCGA-AF-3913-01A-02D-1115-02_TCGA-AF-3913-11A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3901-10A-01D-1115-02	d6a98ec3-e843-482d-88ab-484235f648b0	TCGA-AG-3901-01A-01D-1115-02_TCGA-AG-3901-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AF-2692-10A-01D-1167-02	d5b76166-4d9a-48ab-93c4-47e3524cd423	TCGA-AF-2692-01A-01D-1167-02_TCGA-AF-2692-10A-01D-1167-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-4008-10A-01D-1115-02	04d642b5-e53c-43e1-9b48-5a3c55f61950	TCGA-AG-4008-01A-01D-1115-02_TCGA-AG-4008-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A020-11A-11D-A079-02	18047d41-47ea-4cc0-9918-19d33d182298	TCGA-AG-A020-01A-21D-A079-02_BB04EHABXX---TCGA-AG-A020-11A-11D-A079-02_BB04EHABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3574-10A-01D-1167-02	8bcf4b23-7007-4919-bc51-a71e98e295b4	TCGA-AG-3574-01A-01D-1167-02_A808TFABXX---TCGA-AG-3574-10A-01D-1167-02_A808TFABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A01Y-11A-11D-A079-02	b70f17f6-457e-4ff0-8e50-2a1573bc5eb9	TCGA-AG-A01Y-01A-41D-A079-02_TCGA-AG-A01Y-11A-11D-A079-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3882-10A-01D-0957-02	cbd098bc-110d-41e8-965e-d1e3485bd49a	TCGA-AG-3882-01A-01D-0957-02_TCGA-AG-3882-10A-01D-0957-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3999-10A-01D-1115-02	49016cd5-c461-45b4-8016-dde0cd096173	TCGA-AG-3999-01A-01D-1115-02_TCGA-AG-3999-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-A011-10A-01D-A078-02	81a99699-bb5d-4a80-b132-77eddb57f984	TCGA-AG-A011-01A-01D-A077-02_BB0BM5ABXX---TCGA-AG-A011-10A-01D-A078-02_BB0BM5ABXX---Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3728-10A-01D-1115-02	6a2a30ef-2fcf-485b-9fe3-d32c89393f50	TCGA-AG-3728-01A-01D-1115-02_TCGA-AG-3728-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3909-10A-01D-1115-02	fd9134ed-57b7-4220-9f8e-c9afc2af6a9e	TCGA-AG-3909-01A-01D-1115-02_TCGA-AG-3909-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
TCGA-AG-3902-10A-01D-1115-02	d70ebf7e-fbce-48d0-a2dc-bad5cd28928d	TCGA-AG-3902-01A-01D-1115-02_TCGA-AG-3902-10A-01D-1115-02_Segment.tsv	hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0	Level_3	yes	broad.mit.edu:mirror_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg_2012122100	READ-NORMALS.cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_READ-NORMALS.Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg.Level_3.2012122100.0.0	yes
