Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
PDPN	10630	broad.mit.edu	37	1	13936955	13936955	+	Missense_Mutation	SNP	C	T	T			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr1:13936955C>T	uc001avd.2	+	3	552	c.503C>T	c.(502-504)GCG>GTG	p.A168V	PDPN_uc001avc.2_Missense_Mutation_p.A168V|PDPN_uc009vob.2_Missense_Mutation_p.A50V|PDPN_uc009voc.2_Missense_Mutation_p.A50V|PDPN_uc001ave.2_Missense_Mutation_p.A50V|PDPN_uc001avf.2_Missense_Mutation_p.A50V	NM_006474	NP_006465	Q86YL7	PDPN_HUMAN	lung type-I cell membrane-associated	92	Extracellular (Potential).				cell morphogenesis|lymphangiogenesis|regulation of cell shape	filopodium membrane|integral to plasma membrane|lamellipodium membrane|microvillus membrane|ruffle membrane				ovary(2)	2	Ovarian(185;0.249)	all_lung(284;2.29e-05)|Lung NSC(185;4.37e-05)|Renal(390;0.000147)|Breast(348;0.000162)|Colorectal(325;0.00058)|Ovarian(437;0.00965)|Hepatocellular(190;0.0245)|Myeloproliferative disorder(586;0.0255)	GBM - Glioblastoma multiforme(2;0.00182)	UCEC - Uterine corpus endometrioid carcinoma (279;0.00969)|Colorectal(212;4.48e-06)|COAD - Colon adenocarcinoma(227;0.000194)|BRCA - Breast invasive adenocarcinoma(304;0.000347)|Kidney(185;0.00087)|KIRC - Kidney renal clear cell carcinoma(229;0.0027)|STAD - Stomach adenocarcinoma(313;0.00802)|READ - Rectum adenocarcinoma(331;0.0678)		ACAGTCCACGCGCAAGAACAA	0.507000													5	121	---	---	---	---	0	0	0.001984	0	0
MST1P9	11223	broad.mit.edu	37	1	17085791	17085791	+	Missense_Mutation	SNP	G	A	A	rs2297532	by1000genomes	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr1:17085791G>A	uc010ock.1	-	8	1030	c.1030C>T	c.(1030-1032)CGT>TGT	p.R344C	CROCC_uc009voy.1_Intron|MST1P9_uc001azp.3_5'UTR	NR_002729				SubName: Full=Hepatocyte growth factor-like protein homolog;												0						TCTGTACAACGCCGGATCTGG	0.692000													4	31	---	---	---	---	0	0	0.001168	0	0
Unknown	0	broad.mit.edu	37	1	148882025	148882025	+	RNA	SNP	C	T	T	rs150449871	by1000genomes	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr1:148882025C>T	uc009wkv.1	+	3		c.246C>T								Homo sapiens cDNA, FLJ17483.																		TGTTTTCTAGCAGTGACAAAT	0.343000													5	73	---	---	---	---	0	0	0.000602	0	0
LOC650368	650368	broad.mit.edu	37	11	3427845	3427845	+	RNA	SNP	C	T	T			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr11:3427845C>T	uc010qxs.1	+	9		c.838C>T			LOC650368_uc001lxx.2_RNA|LOC650368_uc001lxy.2_RNA	NR_024248				Homo sapiens cDNA FLJ41654 fis, clone FEBRA2025463, weakly  similar to Homo sapiens HMT-1 mRNA for beta-1,4 mannosyltransferase.												0						CTTCAAGTGGCAGGAGCAGAA	0.587000													5	51	---	---	---	---	0	0	0.000602	0	0
TNKS1BP1	85456	broad.mit.edu	37	11	57075943	57075943	+	Silent	SNP	G	A	A			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr11:57075943G>A	uc001njr.2	-	5	4554	c.4242C>T	c.(4240-4242)TAC>TAT	p.Y1414Y	TNKS1BP1_uc001njs.2_Silent_p.Y1414Y|TNKS1BP1_uc009ymd.1_Silent_p.Y865Y	NM_033396	NP_203754	Q9C0C2	TB182_HUMAN	tankyrase 1-binding protein 1	1414	Acidic.				nuclear-transcribed mRNA poly(A) tail shortening|telomere maintenance via telomerase	cytoskeleton|cytosol|nuclear telomeric heterochromatin	ankyrin binding|enzyme binding			skin(1)	1		all_epithelial(135;0.21)				AAGACGAGGAGTAATCTTCAC	0.602000													130	287	---	---	---	---	0	0	0.003610	0	0
MYH6	4624	broad.mit.edu	37	14	23866411	23866411	+	Missense_Mutation	SNP	C	T	T			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr14:23866411C>T	uc001wjv.2	-	17	2085	c.2018G>A	c.(2017-2019)CGT>CAT	p.R673H		NM_002471	NP_002462	P13533	MYH6_HUMAN	myosin heavy chain 6	673	Actin-binding.|Myosin head-like.				adult heart development|atrial cardiac muscle tissue morphogenesis|cardiac muscle fiber development|in utero embryonic development|muscle filament sliding|regulation of ATPase activity|regulation of blood pressure|regulation of heart rate|regulation of the force of heart contraction|sarcomere organization|striated muscle contraction|ventricular cardiac muscle tissue morphogenesis|visceral muscle development	cytosol|focal adhesion|muscle myosin complex|myosin filament|nucleus|sarcomere	actin binding|actin-dependent ATPase activity|ATP binding|calmodulin binding|microfilament motor activity|protein kinase binding|structural constituent of muscle			pancreas(2)|ovary(1)|skin(1)	4	all_cancers(95;2.54e-05)			GBM - Glioblastoma multiforme(265;0.00764)|READ - Rectum adenocarcinoma(4;0.0289)|Colorectal(4;0.0441)		GATGATGCAACGCACAAAGTG	0.542000													64	138	---	---	---	---	0	0	0.003610	0	0
Unknown	0	broad.mit.edu	37	15	28948349	28948349	+	5'Flank	SNP	T	C	C			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr15:28948349T>C	uc001zcd.2	+											DQ593033																		CCACTGGCTCTCAGAAGGGGT	0.567000													2	7	---	---	---	---	0	0	0.004672	0	0
NEK8	284086	broad.mit.edu	37	17	27068491	27068491	+	Missense_Mutation	SNP	A	G	G			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr17:27068491A>G	uc002hcp.2	+	14	1952	c.1952A>G	c.(1951-1953)GAT>GGT	p.D651G	TRAF4_uc002hcq.1_5'Flank|TRAF4_uc002hcs.2_5'Flank	NM_178170	NP_835464	Q86SG6	NEK8_HUMAN	NIMA-related kinase 8	651	RCC1 5.					cytoplasm|primary cilium	ATP binding|metal ion binding|protein binding|protein serine/threonine kinase activity			stomach(2)|ovary(1)|pancreas(1)|liver(1)|skin(1)	6	Lung NSC(42;0.0158)					AGGGATGAGGATGCCGGACTC	0.592000													26	52	---	---	---	---	0	0	0.003954	0	0
BCAS3	54828	broad.mit.edu	37	17	59024649	59024649	+	Missense_Mutation	SNP	G	C	C			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr17:59024649G>C	uc002iyv.3	+	14	1266	c.1157G>C	c.(1156-1158)TGG>TCG	p.W386S	BCAS3_uc010wow.1_Missense_Mutation_p.W173S|BCAS3_uc002iyu.3_Missense_Mutation_p.W386S|BCAS3_uc002iyw.3_Missense_Mutation_p.W382S|BCAS3_uc002iyx.1_Missense_Mutation_p.W201S|BCAS3_uc002iyy.3_Missense_Mutation_p.W157S	NM_001099432	NP_001092902	Q9H6U6	BCAS3_HUMAN	breast carcinoma amplified sequence 3 isoform 1	386	WD 2.					nucleus				ovary(2)|central_nervous_system(2)|skin(1)	5			BRCA - Breast invasive adenocarcinoma(1;3.11e-12)|Epithelial(12;8.2e-07)|all cancers(12;5.33e-06)			ACTCATCCTTGGTCCTCATCA	0.413000													7	209	---	---	---	---	0	0	0.003080	0	0
KCNG2	26251	broad.mit.edu	37	18	77659600	77659600	+	Silent	SNP	G	A	A			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr18:77659600G>A	uc010xfl.1	+	2	1185	c.1185G>A	c.(1183-1185)CTG>CTA	p.L395L		NM_012283	NP_036415	Q9UJ96	KCNG2_HUMAN	potassium voltage-gated channel, subfamily G,	395	Helical; Name=Segment S6; (Potential).				energy reserve metabolic process|regulation of heart contraction|regulation of insulin secretion	voltage-gated potassium channel complex	delayed rectifier potassium channel activity				0		Esophageal squamous(42;0.0157)|Melanoma(33;0.144)		OV - Ovarian serous cystadenocarcinoma(15;6.92e-07)|BRCA - Breast invasive adenocarcinoma(31;0.0244)		GCGGCATCCTGCTCATGGCCT	0.692000													7	73	---	---	---	---	0	0	0.001984	0	0
ZNF845	91664	broad.mit.edu	37	19	53855196	53855196	+	Missense_Mutation	SNP	T	C	C			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr19:53855196T>C	uc010ydv.1	+	4	1385	c.1268T>C	c.(1267-1269)ATG>ACG	p.M423T	ZNF845_uc010ydw.1_Missense_Mutation_p.M423T	NM_138374	NP_612383	Q96IR2	ZN845_HUMAN	zinc finger protein 845	423	C2H2-type 8.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0						TTCAGTCAGATGTCATCCCTT	0.408000													3	119	---	---	---	---	0	0	0.000602	0	0
LRRN4	164312	broad.mit.edu	37	20	6022440	6022440	+	Missense_Mutation	SNP	C	T	T			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr20:6022440C>T	uc002wmo.2	-	5	1675	c.1451G>A	c.(1450-1452)GGC>GAC	p.G484D		NM_152611	NP_689824	Q8WUT4	LRRN4_HUMAN	leucine rich repeat neuronal 4 precursor	484	Extracellular (Potential).					integral to membrane				skin(3)	3						AGGGAAGGGGCCCAGGAGCTT	0.657000													45	115	---	---	---	---	0	0	0.002222	0	0
WDR52	55779	broad.mit.edu	37	3	113115480	113115480	+	Missense_Mutation	SNP	G	A	A	rs145391746		TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr3:113115480G>A	uc003eae.1	-	14	1710	c.1664C>T	c.(1663-1665)GCG>GTG	p.A555V		NM_018338	NP_060808	Q96MT7	WDR52_HUMAN	WD repeat domain 52 isoform 2	555										central_nervous_system(1)	1						CTTCCGTCCCGCAAAAATCGT	0.398000													4	78	---	---	---	---	0	0	0.000248	0	0
NHEDC2	133308	broad.mit.edu	37	4	103988620	103988620	+	Nonsense_Mutation	SNP	G	A	A			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr4:103988620G>A	uc003hwx.3	-	2	960	c.88C>T	c.(88-90)CAG>TAG	p.Q30*	NHEDC2_uc003hwy.2_Nonsense_Mutation_p.Q30*|NHEDC2_uc011cew.1_Nonsense_Mutation_p.Q30*|NHEDC2_uc011cex.1_Nonsense_Mutation_p.Q30*|NHEDC2_uc011cey.1_Nonsense_Mutation_p.Q30*	NM_178833	NP_849155	Q86UD5	NHDC2_HUMAN	Na+/H+ exchanger domain containing 2	30					sodium ion transport	integral to membrane|mitochondrial membrane	solute:hydrogen antiporter activity				0				OV - Ovarian serous cystadenocarcinoma(123;2.3e-08)		AGATTTACCTGTGCTTCTTGA	0.368000													5	85	---	---	---	---	0	0	0.001168	0	0
PDE5A	8654	broad.mit.edu	37	4	120463753	120463753	+	Missense_Mutation	SNP	G	C	C			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr4:120463753G>C	uc003idh.2	-	10	1588	c.1433C>G	c.(1432-1434)ACT>AGT	p.T478S	uc003ide.3_Intron|PDE5A_uc003idf.2_Missense_Mutation_p.T436S|PDE5A_uc003idg.2_Missense_Mutation_p.T426S|uc003idi.3_Intron	NM_001083	NP_001074	O76074	PDE5A_HUMAN	phosphodiesterase 5A isoform 1	478	GAF 2.				platelet activation|signal transduction	cytosol	3',5'-cyclic-GMP phosphodiesterase activity|cGMP binding|zinc ion binding				0					Dipyridamole(DB00975)|Pentoxifylline(DB00806)|Sildenafil(DB00203)|Tadalafil(DB00820)|Theophylline(DB00277)|Vardenafil(DB00862)	AACCTTGCCAGTATTCTCCTC	0.388000													33	56	---	---	---	---	0	0	0.005524	0	0
PCDHB3	56132	broad.mit.edu	37	5	140482147	140482147	+	Missense_Mutation	SNP	C	G	G	rs144773246	byFrequency	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr5:140482147C>G	uc003lio.2	+	1	1914	c.1914C>G	c.(1912-1914)CAC>CAG	p.H638Q	uc003lin.2_5'Flank	NM_018937	NP_061760	Q9Y5E6	PCDB3_HUMAN	protocadherin beta 3 precursor	638	Extracellular (Potential).|Cadherin 6.				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to plasma membrane	calcium ion binding			ovary(1)|pancreas(1)	2			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			CGGCCAAGCACAGGCTGGTGG	0.697000													4	125	---	---	---	---	0	0	0.000602	0	0
DLGAP2	9228	broad.mit.edu	37	8	1497638	1497638	+	Missense_Mutation	SNP	T	C	C			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr8:1497638T>C	uc003wpl.2	+	2	876	c.779T>C	c.(778-780)CTC>CCC	p.L260P	DLGAP2_uc003wpm.2_Missense_Mutation_p.L260P	NM_004745	NP_004736	Q9P1A6	DLGP2_HUMAN	discs large-associated protein 2	339					neuron-neuron synaptic transmission	cell junction|neurofilament|postsynaptic density|postsynaptic membrane	protein binding				0		Ovarian(12;0.0271)|Hepatocellular(245;0.0838)|Colorectal(14;0.0846)		BRCA - Breast invasive adenocarcinoma(11;0.000169)|READ - Rectum adenocarcinoma(644;0.171)		GACCTGTCCCTCAAGACCTCC	0.667000													3	127	---	---	---	---	0	0	0.004672	0	0
TG	7038	broad.mit.edu	37	8	133883736	133883736	+	Missense_Mutation	SNP	T	G	G			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr8:133883736T>G	uc003ytw.2	+	4	459	c.418T>G	c.(418-420)TGT>GGT	p.C140G		NM_003235	NP_003226	P01266	THYG_HUMAN	thyroglobulin precursor	140	Thyroglobulin type-1 2.				hormone biosynthetic process|signal transduction|thyroid gland development|thyroid hormone generation	extracellular space	hormone activity			ovary(8)|breast(4)|pancreas(1)|central_nervous_system(1)|skin(1)	15	Ovarian(258;0.00438)|Acute lymphoblastic leukemia(118;0.155)	Myeloproliferative disorder(644;0.00878)|Acute lymphoblastic leukemia(644;0.0559)|Breast(495;0.0735)	BRCA - Breast invasive adenocarcinoma(115;0.000701)	KIRC - Kidney renal clear cell carcinoma(542;0.0546)		CCAGTGCTGGTGTGTGGACGC	0.597000													27	50	---	---	---	---	0	0	0.005443	0	0
Unknown	0	broad.mit.edu	37	13	82265214	82265214	+	IGR	DEL	A	-	-	rs34280872		TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr13:82265214delA								None (None upstream) : None (None downstream)																							GAGTTGTTCTAAAAAAAAAAA	0.174													4	8	---	---	---	---					
Unknown	0	broad.mit.edu	37	14	95193579	95193580	+	IGR	INS	-	A	A			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr14:95193579_95193580insA								SERPINA13 (80249 upstream) : GSC (40981 downstream)																							ATCAGTTTCTTAAaaaaaaaaa	0.361													2	4	---	---	---	---					
ITGAL	3683	broad.mit.edu	37	16	30495432	30495432	+	Splice_Site	DEL	A	-	-			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr16:30495432delA	uc002dyi.3	+	9	1032	c.856_splice	c.e9-2	p.I286_splice	ITGAL_uc010veu.1_Splice_Site|ITGAL_uc002dyj.3_Splice_Site_p.I203_splice|ITGAL_uc010vev.1_Intron	NM_002209	NP_002200	P20701	ITAL_HUMAN	integrin alpha L isoform a precursor						blood coagulation|heterophilic cell-cell adhesion|inflammatory response|integrin-mediated signaling pathway|leukocyte cell-cell adhesion|leukocyte migration|regulation of immune response|T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell	integrin complex	cell adhesion molecule binding|receptor activity			ovary(3)|lung(3)|central_nervous_system(3)|breast(1)	10					Efalizumab(DB00095)	ACTCCCTCACAGATTGGAAAG	0.488													82	147	---	---	---	---					
Unknown	0	broad.mit.edu	37	16	32077916	32077917	+	IGR	INS	-	TTT	TTT	rs139112308	by1000genomes	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr16:32077916_32077917insTTT								ZNF267 (149290 upstream) : HERC2P4 (84693 downstream)																							ATGGAAAACGGTTATTTTTTTG	0.421													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	16	33942128	33942129	+	IGR	INS	-	T	T	rs76660512	by1000genomes	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr16:33942128_33942129insT								None (None upstream) : MIR1826 (23379 downstream)																							TGGAAAAAATACCACTTGTTAC	0.267													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	18	14208095	14208095	+	IGR	DEL	T	-	-			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr18:14208095delT								ZNF519 (75666 upstream) : LOC284233 (129327 downstream)																							ATTATGTATATTTTTTGAATC	0.333													7	63	---	---	---	---					
Unknown	0	broad.mit.edu	37	2	44293372	44293373	+	IGR	INS	-	T	T	rs112109764	by1000genomes	TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chr2:44293372_44293373insT								LRPPRC (70228 upstream) : PPM1B (102627 downstream)																							TTTTGTTTTTGTTTTGTTTTTT	0.332													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	X	113295245	113295245	+	IGR	DEL	C	-	-			TCGA-EM-A3AO-01A-11D-A202-08	TCGA-EM-A3AO-10A-01D-A202-08									Somatic	Phase_I	Capture				Illumina GAIIx	0fcc88f7-6d11-4c1f-8267-639d9460860b	a6b37086-7f13-4a9d-bfb8-bdd5e53eb4bb	g.chrX:113295245delC								None (None upstream) : HTR2C (523306 downstream)																							tcatcagactccaggttcttc	0.000													2	4	---	---	---	---					
