Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
LOC653657	653657	genome.wustl.edu	36	19	7007553	7007553	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	19	7007553	7007553	C	T	SNP	LOC653657	XM_928697	human	genbank	54_36p	-1	model	missense	c.407	p.R136H	0.001	NULL	NULL	-	no_errors
MUC4	4585	genome.wustl.edu	36	3	196996033	196996033	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	196996033	196996033	G	A	SNP	MUC4	ENST00000405167	human	ensembl	54_36p	-1	known	silent	c.6813	p.T2271	0.008	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
USP36	57602	genome.wustl.edu	36	17	74336626	74336626	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	74336626	74336626	G	A	SNP	USP36	NM_025090	human	genbank	54_36p	-1	validated	silent	c.534	p.F178	0.979	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,PatternScan_IG_MHC,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
C2orf71	388939	genome.wustl.edu	36	2	29147743	29147743	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	29147743	29147743	G	A	SNP	C2orf71	NM_001029883	human	genbank	54_36p	-1	predicted	silent	c.2889	p.S963	0.077	NULL	NULL	-	no_errors
MUC4	4585	genome.wustl.edu	36	3	196995476	196995476	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	196995476	196995476	G	T	SNP	MUC4	ENST00000405167	human	ensembl	54_36p	-1	known	missense	c.7370	p.A2457E	0.013	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
LOC440419	440419	genome.wustl.edu	36	17	22781214	22781214	+	RNA	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	22781214	22781214	G	A	SNP	LOC440419	XR_040504	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.826	-	-	-	no_errors
LOC390834	390834	genome.wustl.edu	36	18	14382844	14382844	+	RNA	SNP	C	C	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	18	14382844	14382844	C	G	SNP	LOC390834	XR_017132	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
SLC9A10	285335	genome.wustl.edu	36	3	113464459	113464459	+	Splice_Site	SNP	A	A	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	113464459	113464459	A	T	SNP	SLC9A10	NM_183061	human	genbank	54_36p	-1	validated	splice_site	c.1197+2	e9+2	0.996	-	-	-	no_errors
ATXN7L1	222255	genome.wustl.edu	36	7	105066182	105066182	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	105066182	105066182	C	G	SNP	ATXN7L1	ENST00000297416	human	ensembl	54_36p	-1	known	missense	c.1065	p.E355D	1.000	NULL	HMMPfam_SCA7	-	no_start_codon
FAM65A	79567	genome.wustl.edu	36	16	66131490	66131490	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	16	66131490	66131490	C	T	SNP	FAM65A	NM_024519	human	genbank	54_36p	+1	validated	missense	c.448	p.R150W	1.000	NULL	superfamily_ARM-type_fold	-	no_errors
CAMK2B	816	genome.wustl.edu	36	7	44240532	44240532	+	Silent	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	44240532	44240532	C	T	SNP	CAMK2B	NM_001220	human	genbank	54_36p	-1	reviewed	silent	c.1113	p.T371	0.799	superfamily_Kinase_like	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_SSF54427,HMMPfam_CaMKII_AD	-	no_errors
ENSG00000189423	0	genome.wustl.edu	36	17	20272686	20272686	+	Silent	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	20272686	20272686	C	T	SNP	ENSG00000189423	ENST00000342174	human	ensembl	54_36p	+1	known	silent	c.744	p.H248	0.006	superfamily_SSF54001,HMMPfam_UCH	superfamily_SSF54001,HMMPfam_UCH	-	no_start_codon
MYC	4609	genome.wustl.edu	36	8	128819866	128819866	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	8	128819866	128819866	C	T	SNP	MYC	NM_002467	human	genbank	54_36p	+1	reviewed	missense	c.221	p.P74L	1.000	HMMPfam_Myc_N	HMMPfam_Myc_N,HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353,HMMPfam_Myc-LZ	-	no_errors
MUC4	4585	genome.wustl.edu	36	3	196996085	196996085	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	196996085	196996085	G	C	SNP	MUC4	ENST00000405167	human	ensembl	54_36p	-1	known	missense	c.6761	p.T2254S	0.013	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
WT1	7490	genome.wustl.edu	36	11	32374486	32374486	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	32374486	32374486	G	T	SNP	WT1	NM_024426	human	genbank	54_36p	-1	reviewed	nonsense	c.1142	p.S381*	0.996	HMMPfam_WT1	HMMPfam_WT1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
GTF2IRD1	9569	genome.wustl.edu	36	7	73571695	73571695	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	73571695	73571695	G	A	SNP	GTF2IRD1	NM_016328	human	genbank	54_36p	+1	reviewed	missense	c.626	p.R209Q	0.993	NULL	HMMPfam_GTF2I	-	no_errors
RNF157	114804	genome.wustl.edu	36	17	71669646	71669646	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	71669646	71669646	G	A	SNP	RNF157	NM_052916	human	genbank	54_36p	-1	validated	silent	c.825	p.A275	0.627	superfamily_RING/U-box	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors
CCDC73	493860	genome.wustl.edu	36	11	32620175	32620175	+	Silent	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	32620175	32620175	C	T	SNP	CCDC73	NM_001008391	human	genbank	54_36p	-1	validated	silent	c.969	p.R323	1.000	NULL	NULL	-	no_errors
ENSG00000215512	0	genome.wustl.edu	36	18	15313276	15313276	+	Missense_Mutation	SNP	A	A	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	18	15313276	15313276	A	T	SNP	ENSG00000215512	ENST00000333851	human	ensembl	54_36p	-1	known	missense	c.377	p.I126N	0.012	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	PatternScan_ASP_PROTEASE,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_start_codon
EPHA10	284656	genome.wustl.edu	36	1	38000163	38000163	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	38000163	38000163	G	A	SNP	EPHA10	NM_001099439	human	genbank	54_36p	-1	validated	silent	c.351	p.G117	0.531	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,superfamily_Galactose-binding domain-like	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMPfam_SAM_1,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),PatternScan_EGF_2	-	no_errors
LOC728401	728401	genome.wustl.edu	36	5	21519419	21519419	+	Silent	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	21519419	21519419	G	A	SNP	LOC728401	XM_001128001	human	genbank	54_36p	-1	model	silent	c.459	p.A153	0.006	NULL	NULL	-	no_errors
MTMR3	8897	genome.wustl.edu	36	22	28728934	28728934	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	28728934	28728934	G	C	SNP	MTMR3	NM_021090	human	genbank	54_36p	+1	reviewed	missense	c.623	p.S208T	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors
LOC100133120	100133120	genome.wustl.edu	36	7	57470	57470	+	RNA	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	57470	57470	C	T	SNP	LOC100133120	XR_037156	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.995	-	-	-	pseudogene
F2RL1	2150	genome.wustl.edu	36	5	76150837	76150837	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	76150837	76150837	C	T	SNP	F2RL1	NM_005242	human	genbank	54_36p	+1	validated	missense	c.74	p.T25I	0.001	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
SPESP1	246777	genome.wustl.edu	36	15	67025715	67025715	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	67025715	67025715	G	A	SNP	SPESP1	NM_145658	human	genbank	54_36p	+1	provisional	missense	c.788	p.R263Q	0.090	NULL	NULL	-	no_errors
APC	324	genome.wustl.edu	36	5	112206993	112206993	+	Missense_Mutation	SNP	T	T	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	112206993	112206993	T	A	SNP	APC	NM_000038	human	genbank	54_36p	+1	reviewed	missense	c.7803	p.S2601R	0.958	NULL	HMMPfam_Arm,HMMSmart_SM00185,HMMPfam_APC_crr,HMMPfam_SAMP,HMMPfam_EB1_binding,HMMPfam_APC_basic,HMMPfam_APC_15aa,superfamily_ARM repeat	-	no_errors
ENSG00000204838	0	genome.wustl.edu	36	9	41944495	41944495	+	Silent	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	41944495	41944495	C	T	SNP	ENSG00000204838	ENST00000377616	human	ensembl	54_36p	-1	known	silent	c.264	p.P88	0.000	NULL	NULL	-	no_errors
C14orf23	387978	genome.wustl.edu	36	14	28331060	28331061	+	In_Frame_Ins	INS	-	-	AAC			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	-	-			-	-	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	28331060	28331061	-	AAC	INS	C14orf23	ENST00000399387	human	ensembl	54_36p	+1	known	in_frame_ins	c.346_347	p.117in_frame_insQ	0.004:0.004	NULL	NULL	-	no_errors
TTC17	55761	genome.wustl.edu	36	11	43382126	43382126	+	Silent	SNP	T	T	C			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	43382126	43382126	T	C	SNP	TTC17	NM_018259	human	genbank	54_36p	+1	provisional	silent	c.1335	p.F445	1.000	superfamily_SSF48452	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR	-	no_errors
MUC5B	727897	genome.wustl.edu	36	11	1225155	1225155	+	Missense_Mutation	SNP	T	T	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	1225155	1225155	T	G	SNP	MUC5B	NM_002458	human	genbank	54_36p	+1	validated	missense	c.10478	p.V3493G	0.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
SCAMP2	10066	genome.wustl.edu	36	15	72934015	72934015	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	72934015	72934015	G	T	SNP	SCAMP2	NM_005697	human	genbank	54_36p	-1	reviewed	missense	c.86	p.A29D	0.103	NULL	HMMPfam_SCAMP	-	no_errors
TSG101	7251	genome.wustl.edu	36	11	18487677	18487677	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	18487677	18487677	C	T	SNP	TSG101	NM_006292	human	genbank	54_36p	-1	reviewed	missense	c.469	p.G157R	1.000	HMMSmart_SM00212	superfamily_UBC-like,HMMPfam_UEV,HMMSmart_SM00212,HMMPfam_Vps23_core	-	no_errors
FANCB	2187	genome.wustl.edu	36	X	14793169	14793169	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	X	14793169	14793169	C	A	SNP	FANCB	NM_001018113	human	genbank	54_36p	-1	reviewed	nonsense	c.385	p.E129*	0.755	NULL	NULL	-	no_errors
FLJ43860	389690	genome.wustl.edu	36	8	142569527	142569527	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	8	142569527	142569527	C	T	SNP	FLJ43860	NM_207414	human	genbank	54_36p	-1	validated	missense	c.569	p.S190N	0.989	NULL	HMMPfam_HEAT,superfamily_ARM repeat	-	pseudogene
PLA2G4C	8605	genome.wustl.edu	36	19	53299742	53299742	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	19	53299742	53299742	C	G	SNP	PLA2G4C	NM_003706	human	genbank	54_36p	-1	provisional	missense	c.172	p.A58P	0.980	HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase,HMMPfam_PLA2_B	HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase,HMMPfam_PLA2_B	-	no_errors
MUC4	4585	genome.wustl.edu	36	3	196990541	196990541	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	196990541	196990541	A	G	SNP	MUC4	ENST00000405167	human	ensembl	54_36p	-1	known	missense	c.12305	p.L4102P	0.003	NULL	HMMSmart_SM00539,HMMPfam_NIDO,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00723,HMMPfam_AMOP,HMMSmart_SM00216,HMMPfam_VWD,PatternScan_EGF_1,HMMSmart_SM00181,superfamily_EGF/Laminin	-	no_errors
LOC100131046	100131046	genome.wustl.edu	36	16	20076331	20076331	+	RNA	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	16	20076331	20076331	C	T	SNP	LOC100131046	XR_037711	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.205	-	-	-	pseudogene
KANK1	23189	genome.wustl.edu	36	9	701981	701981	+	Silent	SNP	C	C	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	701981	701981	C	G	SNP	KANK1	NM_015158	human	genbank	54_36p	+1	reviewed	silent	c.1215	p.A405	0.883	superfamily_ANK	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
TMCO3	55002	genome.wustl.edu	36	13	113241795	113241795	+	Silent	SNP	C	C	T			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	13	113241795	113241795	C	T	SNP	TMCO3	NM_017905	human	genbank	54_36p	+1	validated	silent	c.1662	p.F554	0.996	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
uc010azk.1	0	genome.wustl.edu	36	15	27275965	27275965	+	Silent	SNP	C	C	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	27275965	27275965	C	G	SNP	uc010azk.1	ENST00000261275	human	ensembl	54_36p	-1	known	silent	c.81	p.P27	0.957	NULL	NULL	-	no_start_codon
LOC728093	728093	genome.wustl.edu	36	5	98888001	98888001	+	RNA	SNP	A	A	G			TCGA-AB-2827-03B-01W-0728-08	TCGA-AB-2827-11B-01W-0728-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	98888001	98888001	A	G	SNP	LOC728093	XR_042337	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	pseudogene
