Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
MEIS3P2	257468	genome.wustl.edu	36	17	20433485	20433485	+	Silent	SNP	C	C	T			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	20433485	20433485	C	T	SNP	MEIS3P2	ENST00000340731	human	ensembl	54_36p	+1	known	silent	c.288	p.G96	0.996	NULL	PatternScan_HOMEOBOX_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors
LOC642458	642458	genome.wustl.edu	36	14	18546148	18546148	+	RNA	SNP	T	T	A			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	18546148	18546148	T	A	SNP	LOC642458	XR_016116	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
ENSG00000212884	0	genome.wustl.edu	36	NT_113930	117481	117481	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	NT_113930	117481	117481	G	A	SNP	ENSG00000212884	ENST00000391571	human	ensembl	54_36p	+1	known	missense	c.112	p.V38M	NULL	HMMPfam_2-Hacid_dh,superfamily_SSF52283	HMMPfam_2-Hacid_dh,superfamily_SSF52283	-	no_errors
KIRREL3	84623	genome.wustl.edu	36	11	125848437	125848437	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	125848437	125848437	T	C	SNP	KIRREL3	NM_032531	human	genbank	54_36p	-1	provisional	missense	c.568	p.I190V	1.000	superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set	-	no_errors
NPM1	4869	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08					-	-	Verified	Valid	Somatic		Capture				Illumina GAIIx	5	170770152	170770153	0	TCTG	INS	NPM1	NM_002520	human	genbank	54_36p	1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	Nucleoplasmin;HMMPfam_Nucleoplasmin;Nucleoplasmin-like	-	NA
HSPA4	3308	genome.wustl.edu	36	5	132459795	132459795	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	132459795	132459795	T	A	SNP	HSPA4	NM_002154	human	genbank	54_36p	+1	validated	nonsense	c.1757	p.L586*	0.003	HMMPfam_HSP70,superfamily_SSF100920	PatternScan_HSP70_1,superfamily_SSF53067,HMMPfam_HSP70,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934	-	no_errors
PSPC1	55269	genome.wustl.edu	36	13	19177879	19177879	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	13	19177879	19177879	T	C	SNP	PSPC1	NM_001042414	human	genbank	54_36p	-1	validated	missense	c.1309	p.M437V	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMPfam_NOPS	-	no_errors
TRAPPC6B	122553	genome.wustl.edu	36	14	38708986	38708986	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	38708986	38708986	G	A	SNP	TRAPPC6B	NM_001079537	human	genbank	54_36p	-1	validated	missense	c.65	p.A22V	1.000	HMMPfam_TRAPP	HMMPfam_TRAPP	-	no_errors
KLRK1	22914	genome.wustl.edu	36	12	10432664	10432664	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	12	10432664	10432664	G	A	SNP	KLRK1	NM_007360	human	genbank	54_36p	-1	reviewed	missense	c.13	p.R5C	0.003	NULL	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors
RAPH1	65059	genome.wustl.edu	36	2	204012628	204012628	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	204012628	204012628	G	T	SNP	RAPH1	NM_213589	human	genbank	54_36p	-1	validated	missense	c.3530	p.S1177Y	1.000	NULL	HMMSmart_SM00314,HMMPfam_RA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
ACTR3B	57180	genome.wustl.edu	36	7	152151423	152151423	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2835-03B-01W-0728-08	TCGA-AB-2835-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	152151423	152151423	C	T	SNP	ACTR3B	NM_020445	human	genbank	54_36p	+1	validated	missense	c.748	p.R250W	0.042	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain	HMMPfam_Actin,superfamily_Actin-like ATPase domain,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE	-	no_errors
