Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
TRIO	7204	genome.wustl.edu	36	5	14340024	14340024	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	14340024	14340024	G	A	SNP	TRIO	NM_007118	human	genbank	54_36p	+1	validated	missense	c.392	p.R131H	1.000	superfamily_CRAL/TRIO domain,HMMSmart_SM00516	superfamily_CRAL/TRIO domain,HMMSmart_SM00516,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
NLRC4	58484	genome.wustl.edu	36	2	32331149	32331149	+	Silent	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	32331149	32331149	G	A	SNP	NLRC4	NM_021209	human	genbank	54_36p	-1	validated	silent	c.105	p.R35	0.000	HMMPfam_CARD,superfamily_DEATH domain	HMMPfam_CARD,HMMPfam_NACHT,superfamily_DEATH domain,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CDT1	81620	genome.wustl.edu	36	16	87401020	87401020	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	16	87401020	87401020	C	A	SNP	CDT1	NM_030928	human	genbank	54_36p	+1	validated	missense	c.1183	p.P395T	0.003	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMPfam_CDT1"	-	no_errors
SUMO2	6613	genome.wustl.edu	36	17	70676039	70676039	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	70676039	70676039	C	T	SNP	SUMO2	NM_006937	human	genbank	54_36p	-1	reviewed	missense	c.278	p.G93D	1.000	superfamily_Ubiquitin-like	superfamily_Ubiquitin-like,HMMSmart_SM00213,HMMPfam_ubiquitin	-	no_errors
MEX3B	84206	genome.wustl.edu	36	15	80123062	80123062	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	80123062	80123062	A	G	SNP	MEX3B	NM_032246	human	genbank	54_36p	-1	provisional	missense	c.1204	p.S402P	0.078	NULL	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMPfam_KH_1,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors
PCK2	5106	genome.wustl.edu	36	14	23633460	23633460	+	Silent	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	23633460	23633460	C	T	SNP	PCK2	NM_004563	human	genbank	54_36p	+1	reviewed	silent	c.6	p.A2	0.994	NULL	superfamily_PEP carboxykinase N-terminal domain,HMMPfam_PEPCK,superfamily_PEP carboxykinase-like,PatternScan_PEPCK_GTP	-	no_errors
RBFOX2	23543	genome.wustl.edu	36	22	34664851	34664851	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	34664851	34664851	C	T	SNP	RBM9	NM_001082578	human	genbank	54_36p	-1	reviewed	missense	c.227	p.R76Q	0.998	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
PRAMEF16	654348	genome.wustl.edu	36	1	13370462	13370462	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	13370462	13370462	C	T	SNP	PRAMEF16	NM_001045480	human	genbank	54_36p	+1	provisional	missense	c.1172	p.T391M	0.012	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
KAT6B	23522	genome.wustl.edu	36	10	76405901	76405901	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	10	76405901	76405901	C	G	SNP	MYST4	NM_012330	human	genbank	54_36p	+1	validated	missense	c.1800	p.H600Q	1.000	NULL	"HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS"	-	no_errors
PRPF4B	8899	genome.wustl.edu	36	6	3994338	3994338	+	Silent	SNP	T	T	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	6	3994338	3994338	T	C	SNP	PRPF4B	NM_003913	human	genbank	54_36p	+1	reviewed	silent	c.2025	p.Y675	0.991	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
MUC16	94025	genome.wustl.edu	36	19	8949095	8949095	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	19	8949095	8949095	G	T	SNP	MUC16	NM_024690	human	genbank	54_36p	-1	validated	missense	c.3720	p.S1240R	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
LRRFIP1	9208	genome.wustl.edu	36	2	238281927	238281927	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	238281927	238281927	C	T	SNP	LRRFIP1	NM_004735	human	genbank	54_36p	+1	validated	missense	c.68	p.A23V	1.000	HMMPfam_DUF2051	HMMPfam_DUF2051	-	no_errors
LOC100130646	100130646	genome.wustl.edu	36	3	15150673	15150673	+	RNA	SNP	T	T	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	15150673	15150673	T	C	SNP	LOC100130646	XR_038601	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.050	-	-	-	pseudogene
SNRNP200	23020	genome.wustl.edu	36	2	96332701	96332701	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	96332701	96332701	A	G	SNP	SNRNP200	NM_014014	human	genbank	54_36p	-1	validated	missense	c.304	p.Y102H	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMSmart_SM00611,HMMPfam_Sec63	-	no_errors
NAV2	89797	genome.wustl.edu	36	11	20032211	20032211	+	Silent	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	20032211	20032211	C	T	SNP	NAV2	NM_182964	human	genbank	54_36p	+1	validated	silent	c.4560	p.P1520	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,HMMPfam_CH,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	-	no_errors
THRAP3	9967	genome.wustl.edu	36	1	36534823	36534823	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	36534823	36534823	G	A	SNP	THRAP3	NM_005119	human	genbank	54_36p	+1	validated	missense	c.2168	p.R723H	1.000	NULL	NULL	-	no_errors
SLC35G6	643664	genome.wustl.edu	36	17	7326900	7326900	+	Silent	SNP	G	G	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	7326900	7326900	G	C	SNP	AMAC1L3	NM_001102614	human	genbank	54_36p	+1	provisional	silent	c.873	p.V291	1.000	HMMPfam_DUF6,superfamily_SSF103481	HMMPfam_DUF6,superfamily_SSF103481	-	no_errors
ADAMTSL1	92949	genome.wustl.edu	36	9	18767304	18767304	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	18767304	18767304	C	T	SNP	ADAMTSL1	NM_001040272	human	genbank	54_36p	+1	validated	missense	c.3077	p.S1026F	0.078	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_PLAC,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DUOX1	53905	genome.wustl.edu	36	15	43227458	43227458	+	Silent	SNP	T	T	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	43227458	43227458	T	A	SNP	DUOX1	NM_017434	human	genbank	54_36p	+1	reviewed	silent	c.2613	p.I871	0.894	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors
DOCK8	81704	genome.wustl.edu	36	9	424936	424937	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	-	-			-	-	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	424936	424937	-	T	INS	DOCK8	NM_203447	human	genbank	54_36p	+1	validated	frame_shift_ins	c.4836_4837	p.D1612fs	1.000:1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
MYF6	4618	genome.wustl.edu	36	12	79626771	79626771	+	Silent	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	12	79626771	79626771	G	A	SNP	MYF6	NM_002469	human	genbank	54_36p	+1	provisional	silent	c.630	p.S210	0.004	NULL	HMMPfam_Basic,HMMSmart_SM00520,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors
BRD1	23774	genome.wustl.edu	36	22	48567382	48567382	+	Silent	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	48567382	48567382	G	A	SNP	BRD1	ENST00000342989	human	ensembl	54_36p	-1	known	silent	c.2517	p.S839	1.000	NULL	HMMPfam_EPL1,superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1,superfamily_SSF63748,HMMSmart_PWWP	-	no_errors
DCTD	1635	genome.wustl.edu	36	4	184073702	184073702	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	4	184073702	184073702	G	A	SNP	DCTD	NM_001012732	human	genbank	54_36p	-1	reviewed	missense	c.47	p.S16F	0.752	NULL	HMMPfam_dCMP_cyt_deam_1,superfamily_Cytidine_deaminase-like,PatternScan_CYT_DCMP_DEAMINASES	-	no_errors
NEB	4703	genome.wustl.edu	36	2	152182157	152182157	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	152182157	152182157	C	G	SNP	NEB	NM_004543	human	genbank	54_36p	-1	reviewed	missense	c.10419	p.M3473I	1.000	HMMPfam_Nebulin,HMMSmart_SM00227	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
KDM3B	51780	genome.wustl.edu	36	5	137756942	137756942	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	5	137756942	137756942	G	A	SNP	JMJD1B	NM_016604	human	genbank	54_36p	+1	validated	missense	c.2813	p.R938H	1.000	NULL	HMMSmart_SM00558,HMMPfam_JmjC,superfamily_Clavaminate synthase-like	-	no_errors
LOC643827	643827	genome.wustl.edu	36	9	65375598	65375598	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	65375598	65375598	G	A	SNP	LOC643827	XM_001714537	human	genbank	54_36p	+1	model	missense	c.1946	p.G649E	1.000	superfamily_Concanavalin A-like lectins/glucanases,PatternScan_GLYCO_HORMONE_BETA_1	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00181,HMMPfam_EGF,superfamily_Fibrinogen C-terminal domain-like,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_GLYCO_HORMONE_BETA_1	-	no_errors
RAB15	376267	genome.wustl.edu	36	14	64486883	64486883	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	64486883	64486883	G	A	SNP	RAB15	NM_198686	human	genbank	54_36p	-1	validated	missense	c.458	p.T153M	0.997	NULL	PatternScan_SIGMA54_INTERACT_1,HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540	-	no_errors
GPR112	139378	genome.wustl.edu	36	X	135254814	135254814	+	Missense_Mutation	SNP	T	T	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	X	135254814	135254814	T	A	SNP	GPR112	NM_153834	human	genbank	54_36p	+1	validated	missense	c.1283	p.L428H	0.011	NULL	superfamily_ConA_like_lec_gl,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
LOC644637	644637	genome.wustl.edu	36	22	14746264	14746264	+	RNA	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	14746264	14746264	C	T	SNP	LOC644637	XR_017623	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.041	-	-	-	pseudogene
LOC653541	653541	genome.wustl.edu	36	4	191223779	191223779	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	4	191223779	191223779	G	C	SNP	LOC653541	XM_927996	human	genbank	54_36p	+1	model	missense	c.406	p.G136R	0.030	NULL	HMMSmart_SM00389,HMMPfam_Homeobox,superfamily_Homeodomain-like	-	no_errors
LY96	23643	genome.wustl.edu	36	8	75103776	75103776	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	8	75103776	75103776	C	A	SNP	LY96	NM_015364	human	genbank	54_36p	+1	validated	missense	c.416	p.S139Y	0.006	HMMPfam_E1_DerP2_DerF2,HMMSmart_SM00737	HMMPfam_E1_DerP2_DerF2,HMMSmart_SM00737	-	no_errors
CASP10	843	genome.wustl.edu	36	2	201768825	201768825	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	201768825	201768825	C	A	SNP	CASP10	NM_032977	human	genbank	54_36p	+1	reviewed	missense	c.593	p.T198K	0.002	NULL	superfamily_DEATH_like,HMMSmart_DED,HMMPfam_DED,superfamily_SSF52129,HMMSmart_CASc,HMMPfam_Peptidase_C14,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS	-	no_errors
ZPBP	11055	genome.wustl.edu	36	7	49993531	49993531	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	49993531	49993531	C	G	SNP	ZPBP	NM_007009	human	genbank	54_36p	-1	provisional	missense	c.914	p.G305A	0.990	HMMPfam_Sp38	HMMPfam_Sp38	-	no_errors
SIGLEC16	400709	genome.wustl.edu	36	19	55166772	55166772	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	19	55166772	55166772	C	G	SNP	SIGLECP16	ENST00000356298	human	ensembl	54_36p	+1	known	missense	c.1058	p.A353G	0.989	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMPfam_C2-set_2,HMMSmart_SM00408,HMMPfam_ig,PatternScan_IG_MHC	-	no_errors
NRG3	10718	genome.wustl.edu	36	10	83625280	83625280	+	Silent	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	10	83625280	83625280	C	T	SNP	NRG3	NM_001010848	human	genbank	54_36p	+1	validated	silent	c.204	p.C68	1.000	NULL	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_Neuregulin	-	no_errors
PRAMEF2	65122	genome.wustl.edu	36	1	12842584	12842584	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	12842584	12842584	C	T	SNP	PRAMEF2	NM_023014	human	genbank	54_36p	+1	provisional	missense	c.737	p.T246M	0.009	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
GBP1	2633	genome.wustl.edu	36	1	89293100	89293100	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	89293100	89293100	C	A	SNP	GBP1	NM_002053	human	genbank	54_36p	-1	validated	missense	c.1518	p.L506F	0.478	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	-	no_errors
MICALL1	85377	genome.wustl.edu	36	22	36653659	36653659	+	Silent	SNP	C	C	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	36653659	36653659	C	A	SNP	MICALL1	NM_033386	human	genbank	54_36p	+1	validated	silent	c.1761	p.G587	0.758	NULL	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology,superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors
MED21	9412	genome.wustl.edu	36	12	27070645	27070645	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	12	27070645	27070645	T	C	SNP	MED21	NM_004264	human	genbank	54_36p	+1	provisional	missense	c.68	p.I23T	1.000	NULL	NULL	-	no_errors
SPEN	23013	genome.wustl.edu	36	1	16132825	16132825	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	16132825	16132825	G	A	SNP	SPEN	NM_015001	human	genbank	54_36p	+1	reviewed	nonsense	c.7503	p.W2501*	1.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
DOCK8	81704	genome.wustl.edu	36	9	424937	424937	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2849-03B-01W-0728-08	TCGA-AB-2849-11B-01W-0729-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	424937	424937	G	C	SNP	DOCK8	NM_203447	human	genbank	54_36p	+1	validated	missense	c.4837	p.D1613H	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
