| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LGG/2328392/0.GDAC_clinicalDataMerger.Finished/LGG.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_lgg.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LGG |
| Execution Times: | |
| Submitted: | 15:17:26 17-01-13 |
| Completed: | |
| Elapsed: | 03 hrs 26 mins 50 secs |
step 1. GDAC_clinicalDataPicker [id: 294843] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LGG/2328392/0.GDAC_clinicalDataMerger.Finished/LGG.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_lgg.tsv |
| nodeColumn | 1 |
| outPrefix | LGG |
| Output Files: | |
| LGG.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 15:17:39 17-01-13 |
| Completed: | 16:48:22 17-01-13 |
| Elapsed: | 01 hrs 30 mins 43 secs |
step 2. GDAC_clinicalDataPickerReport [id: 294844] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | LGG.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 15:17:39 17-01-13 |
| Completed: | 18:44:14 17-01-13 |
| Elapsed: | 03 hrs 26 mins 35 secs |