| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUSC/2328618/0.GDAC_clinicalDataMerger.Finished/LUSC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_lusc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LUSC |
| Execution Times: | |
| Submitted: | 15:17:29 17-01-13 |
| Completed: | |
| Elapsed: | 03 hrs 28 mins 25 secs |
step 1. GDAC_clinicalDataPicker [id: 294865] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUSC/2328618/0.GDAC_clinicalDataMerger.Finished/LUSC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_lusc.tsv |
| nodeColumn | 1 |
| outPrefix | LUSC |
| Output Files: | |
| LUSC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 15:17:41 17-01-13 |
| Completed: | 16:49:06 17-01-13 |
| Elapsed: | 01 hrs 31 mins 25 secs |
step 2. GDAC_clinicalDataPickerReport [id: 294866] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | LUSC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 15:17:41 17-01-13 |
| Completed: | 18:45:49 17-01-13 |
| Elapsed: | 03 hrs 28 mins 07 secs |