Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58862863	58862863	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7383060	7383060	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67148553	67148553	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94982646	94982646	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119029536	119029536	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI1	10006	broad.mit.edu	37	10	27149637	27149637	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35506835	35506835	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132338229	132338229	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89386532	89386532	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD3	64746	broad.mit.edu	37	1	226349305	226349305	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80631677	80631677	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG1	23205	broad.mit.edu	37	15	78485719	78485719	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTB	60	broad.mit.edu	37	7	5567585	5567585	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6B	51412	broad.mit.edu	37	7	100244946	100244946	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3655286	3655286	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106511921	106511921	+	RNA	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106539102	106539102	+	RNA	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967176	106967176	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33577099	33577099	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33642030	33642030	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33751492	33751492	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5303904	5303904	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77398297	77398297	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43777548	43777548	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43837707	43837707	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64748563	64748563	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64587609	64587609	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK4	79934	broad.mit.edu	37	19	41211335	41211335	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7521032	7521032	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24788449	24788449	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123049786	123049786	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131792956	131792956	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD3	120	broad.mit.edu	37	10	111878265	111878265	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67366087	67366087	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADK	132	broad.mit.edu	37	10	75936567	75936567	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRHL2	54936	broad.mit.edu	37	1	36558117	36558117	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236957737	236957737	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50310439	50310439	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGGF1	55109	broad.mit.edu	37	5	76357715	76357715	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100345510	100345510	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGR3	155465	broad.mit.edu	37	7	16904838	16904838	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109667790	109667790	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241817581	241817581	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241817591	241817591	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKIRIN1	79647	broad.mit.edu	37	1	39466625	39466625	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR7A2	8574	broad.mit.edu	37	1	19630930	19630930	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALB	213	broad.mit.edu	37	4	74275211	74275211	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A1	216	broad.mit.edu	37	9	75526984	75526984	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101434150	101434150	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125856649	125856649	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPPL2	251	broad.mit.edu	37	2	233272933	233272933	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202593401	202593401	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85677633	85677633	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC7	51434	broad.mit.edu	37	12	110824111	110824111	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41572557	41572557	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	113748489	113748489	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61941081	61941081	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54517825	54517825	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54517845	54517845	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	92000797	92000797	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241496731	241496731	+	Intron	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY2	57037	broad.mit.edu	37	7	16649287	16649287	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95504513	95504513	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD33	341405	broad.mit.edu	37	12	52284753	52284753	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145473739	145473739	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197872649	197872649	+	Splice_Site	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD56	345079	broad.mit.edu	37	4	77817765	77817765	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS3	124401	broad.mit.edu	37	16	4748910	4748910	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5724394	5724394	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101295476	101295476	+	5'UTR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101413923	101413923	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO9	338440	broad.mit.edu	37	11	419809	419809	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR2	118429	broad.mit.edu	37	4	80899156	80899156	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA2	302	broad.mit.edu	37	15	60649389	60649389	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36763639	36763639	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B1	8546	broad.mit.edu	37	5	77409608	77409608	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP2	334	broad.mit.edu	37	11	130000093	130000093	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPBP2	10513	broad.mit.edu	37	17	58524943	58524943	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPBP2	10513	broad.mit.edu	37	17	58524966	58524966	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154295719	154295719	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP8	343	broad.mit.edu	37	16	25235823	25235823	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68179364	68179364	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARG2	384	broad.mit.edu	37	14	68087704	68087704	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGFX	503582	broad.mit.edu	37	3	121305010	121305010	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143959611	143959611	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69040404	69040404	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119102197	119102197	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130218994	130218994	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57872492	57872492	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF19	128272	broad.mit.edu	37	1	16525582	16525582	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID3B	10620	broad.mit.edu	37	15	74865420	74865420	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93761927	93761927	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23290987	23290987	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP19	10776	broad.mit.edu	37	15	52844126	52844126	+	3'UTR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35757084	35757084	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB2	409	broad.mit.edu	37	17	4621896	4621896	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC1	92714	broad.mit.edu	37	9	140508733	140508733	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSA	410	broad.mit.edu	37	22	51065369	51065369	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSB	411	broad.mit.edu	37	5	78076130	78076130	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSI	340075	broad.mit.edu	37	5	149678006	149678006	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART3	419	broad.mit.edu	37	4	77022153	77022153	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131104234	131104234	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62438718	62438718	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197072203	197072203	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177001649	177001649	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119187757	119187757	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD3C	219293	broad.mit.edu	37	1	1387854	1387854	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29206476	29206476	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161771911	161771911	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160016544	160016544	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10370725	10370725	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10413448	10413448	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10430011	10430011	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152807404	152807404	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152825152	152825152	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4B	496	broad.mit.edu	37	13	114306064	114306064	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5B	506	broad.mit.edu	37	12	57037165	57037165	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1L	92270	broad.mit.edu	37	5	81601413	81601413	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138394486	138394486	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42571227	42571227	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATPBD4	89978	broad.mit.edu	37	15	35746840	35746840	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142279075	142279075	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR2	554	broad.mit.edu	37	X	153171639	153171639	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41744068	41744068	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZGP1	563	broad.mit.edu	37	7	99566081	99566081	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69348553	69348553	+	5'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARD1	580	broad.mit.edu	37	2	215595194	215595194	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL2	343472	broad.mit.edu	37	1	91182622	91182622	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT5	7920	broad.mit.edu	37	6	31659341	31659341	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58804729	58804729	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND3	57673	broad.mit.edu	37	6	107391909	107391909	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60549174	60549174	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32640306	32640306	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34094977	34094978	+	Intron	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR2	659	broad.mit.edu	37	2	203332383	203332383	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL2	254240	broad.mit.edu	37	22	32833771	32833771	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	889615	889615	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49698291	49698291	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56393883	56393883	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112673091	112673091	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf74	338809	broad.mit.edu	37	12	93100630	93100630	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf27	93081	broad.mit.edu	37	13	103420527	103420527	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45686182	45686182	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf1	11161	broad.mit.edu	37	14	76121288	76121288	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf43	91748	broad.mit.edu	37	14	74193518	74193518	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40678683	40678683	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100341337	100341337	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56619364	56619364	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf10	25941	broad.mit.edu	37	18	34378463	34378463	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf47	126526	broad.mit.edu	37	19	40834484	40834484	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179497459	179497459	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf14	81626	broad.mit.edu	37	1	182869053	182869053	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75102182	75102182	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185153463	185153463	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf66	51093	broad.mit.edu	37	1	156704034	156704034	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf93	127281	broad.mit.edu	37	1	2519924	2519924	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf112	140688	broad.mit.edu	37	20	31043985	31043985	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf196	149840	broad.mit.edu	37	20	5843764	5843764	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20055049	20055049	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf54	113278	broad.mit.edu	37	20	744288	744288	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46122237	46122237	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf91	54149	broad.mit.edu	37	21	19190600	19190600	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf9	23313	broad.mit.edu	37	22	45608157	45608157	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132480014	132480014	+	5'Flank	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26673529	26673529	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf44	80304	broad.mit.edu	37	2	24260771	24260771	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf47	79568	broad.mit.edu	37	2	200824636	200824636	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf53	339779	broad.mit.edu	37	2	27360638	27360638	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74808759	74808759	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043355	74043355	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165703312	165703312	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97597850	97597850	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40937517	40937517	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf25	79020	broad.mit.edu	37	7	42971889	42971889	+	5'Flank	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120765987	120765987	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf76	84933	broad.mit.edu	37	8	124251334	124251334	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39315949	39315949	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86249255	86249255	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP7	164633	broad.mit.edu	37	22	30127185	30127185	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13335494	13335494	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53803960	53803960	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181726077	181726077	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48695521	48695521	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1983718	1983718	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18789699	18789699	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	85932560	85932560	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159169596	159169596	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62751604	62751604	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM1	255022	broad.mit.edu	37	10	105215108	105215108	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND2	23066	broad.mit.edu	37	3	12845176	12845176	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND2	23066	broad.mit.edu	37	3	12858893	12858893	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110495761	110495761	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104934646	104934646	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	122003879	122003879	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119149039	119149039	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX5	23468	broad.mit.edu	37	12	54635431	54635431	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97763935	97763935	+	5'UTR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92923863	92923863	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92970769	92970769	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92987894	92987895	+	3'UTR	DEL	TG	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC135	84229	broad.mit.edu	37	16	57741600	57741600	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC21	64793	broad.mit.edu	37	1	26581979	26581979	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43119035	43119035	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43119141	43119141	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43119231	43119231	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43119529	43119529	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43119551	43119551	+	Nonsense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC37	348807	broad.mit.edu	37	3	126152008	126152008	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78022479	78022479	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	63898446	63898446	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC69	26112	broad.mit.edu	37	5	150565160	150565160	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32674742	32674742	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32724510	32724510	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC76	54482	broad.mit.edu	37	1	100598748	100598748	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC85A	114800	broad.mit.edu	37	2	56420459	56420459	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88A	55704	broad.mit.edu	37	2	55573254	55573254	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC97	90324	broad.mit.edu	37	19	41822729	41822729	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL14	6358	broad.mit.edu	37	17	34310985	34310985	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6A	908	broad.mit.edu	37	7	56122990	56122990	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7548878	7548878	+	Nonsense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28948593	28948594	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158146772	158146772	+	5'Flank	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD247	919	broad.mit.edu	37	1	167487604	167487604	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40	958	broad.mit.edu	37	20	44756741	44756741	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD58	965	broad.mit.edu	37	1	117078851	117078851	+	Splice_Site	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60886359	60886359	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC16	8881	broad.mit.edu	37	13	115022719	115022719	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC40	51362	broad.mit.edu	37	6	110522910	110522910	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91967261	91967261	+	5'UTR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64981815	64981815	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95186575	95186575	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473707	19473707	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19838999	19838999	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59221445	59221445	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44803585	44803585	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25616605	25616605	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60508035	60508036	+	Intron	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60508196	60508196	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60511823	60511823	+	Missense_Mutation	SNP	C	A	A	rs139936391		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294201	31294201	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63489352	63489352	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906161	26906161	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202700488	202700488	+	Splice_Site	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK9	1025	broad.mit.edu	37	9	130551824	130551824	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDO1	1036	broad.mit.edu	37	5	115152132	115152132	+	5'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDRT1	374286	broad.mit.edu	37	17	15502019	15502019	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47493789	47493789	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214816456	214816456	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100356187	100356187	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPN	55839	broad.mit.edu	37	16	81053854	81053854	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56877751	56877751	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170	9859	broad.mit.edu	37	1	243327605	243327605	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88483117	88483117	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP72	55722	broad.mit.edu	37	5	620504	620504	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50863531	50863531	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7797526	7797526	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21897346	21897346	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHKB	1120	broad.mit.edu	37	22	51018042	51018042	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2A	27243	broad.mit.edu	37	19	59063360	59063360	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072435	240072435	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671248	45671248	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIC	23152	broad.mit.edu	37	19	42794338	42794338	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIDEC	63924	broad.mit.edu	37	3	10030086	10030086	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86890087	86890087	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA4	22802	broad.mit.edu	37	1	87040315	87040315	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC16A	23274	broad.mit.edu	37	16	11071113	11071113	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14706196	14706196	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10145867	10145867	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10151728	10151728	+	5'UTR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4D	338339	broad.mit.edu	37	12	8672847	8672847	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4M	10332	broad.mit.edu	37	19	7830240	7830240	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN3	9746	broad.mit.edu	37	12	7295953	7295953	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLUL1	27098	broad.mit.edu	37	18	627251	627251	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123377126	123377126	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMA1	1215	broad.mit.edu	37	14	24976708	24976708	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB1	1258	broad.mit.edu	37	16	57994775	57994775	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21609323	21609323	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21613540	21613540	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17143191	17143191	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41419236	41419236	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74347062	74347062	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1262497	1262497	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146536957	146536958	+	Frame_Shift_Ins	INS	-	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147869430	147869430	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147926752	147926752	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76350405	76350405	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76569454	76569454	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76569461	76569461	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51097337	51097337	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COCH	1690	broad.mit.edu	37	14	31355160	31355160	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103548296	103548296	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71654493	71654493	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105814996	105814996	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70894644	70894644	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56141375	56141375	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177675175	177675175	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109745371	109745371	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117033025	117033025	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110853876	110853876	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107430276	107430276	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137688239	137688239	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189921588	189921588	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47536542	47536542	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47546018	47546018	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61468561	61468561	+	Missense_Mutation	SNP	G	A	A	rs140377811	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMP	1311	broad.mit.edu	37	19	18897083	18897083	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47643888	47643888	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX6A1	1337	broad.mit.edu	37	12	120876393	120876393	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129945771	129945771	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPD	1362	broad.mit.edu	37	17	28773009	28773009	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX2	10814	broad.mit.edu	37	5	175306905	175306905	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39064600	39064600	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211464141	211464141	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8608444	8608444	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207883749	207883749	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197191610	197191610	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRBN	51185	broad.mit.edu	37	3	3209248	3209248	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49701585	49701585	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75944503	75944503	+	3'UTR	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF1	9244	broad.mit.edu	37	19	18709709	18709709	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCCL1	84809	broad.mit.edu	37	1	16945540	16945540	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYAB	1410	broad.mit.edu	37	11	111779603	111779603	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGB	1419	broad.mit.edu	37	2	209007476	209007476	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDAP1	440359	broad.mit.edu	37	16	31580426	31580426	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2813256	2813256	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34286003	34286003	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113516092	113516092	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113871358	113871358	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG4	1464	broad.mit.edu	37	15	75974658	75974658	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166535349	166535349	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTL1	128817	broad.mit.edu	37	20	23420937	23420937	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTHRC1	115908	broad.mit.edu	37	8	104384794	104384794	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	67726441	67726441	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSD	1509	broad.mit.edu	37	11	1774823	1774823	+	Missense_Mutation	SNP	C	A	A	rs121912790		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSF	8722	broad.mit.edu	37	11	66333336	66333336	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSZ	1522	broad.mit.edu	37	20	57571960	57571960	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL9	23113	broad.mit.edu	37	6	43182863	43182863	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	48993371	48993371	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR5	643	broad.mit.edu	37	11	118764836	118764836	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR5	643	broad.mit.edu	37	11	118765377	118765377	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36091444	36091444	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP1	23191	broad.mit.edu	37	15	22935909	22935909	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143957330	143957330	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27B1	1594	broad.mit.edu	37	12	58158802	58158802	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99311209	99311209	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	15997122	15997122	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4Z1	199974	broad.mit.edu	37	1	47534477	47534477	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20015207	20015207	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90315016	90315016	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100680343	100680343	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298989	125298989	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12	25853	broad.mit.edu	37	9	34126386	34126386	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155255945	155255945	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36401822	36401822	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN5	84516	broad.mit.edu	37	16	23678456	23678456	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDO	8528	broad.mit.edu	37	6	110714395	110714395	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX58	23586	broad.mit.edu	37	9	32492480	32492480	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29976852	29976852	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29977074	29977074	+	Intron	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126414281	126414281	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65995143	65995143	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31632962	31632962	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC1B	55789	broad.mit.edu	37	5	59934549	59934549	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14775748	14775748	+	Silent	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14789811	14789811	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137270095	137270095	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137284475	137284475	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50167176	50167176	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46397831	46397831	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX36	170506	broad.mit.edu	37	3	154002886	154002886	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51138374	51138374	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKFZp686A1627	266695	broad.mit.edu	37	13	19625382	19625383	+	RNA	DNP	GG	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK3	27122	broad.mit.edu	37	11	11990115	11990115	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7736529	7736529	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13890989	13890989	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH6	1768	broad.mit.edu	37	2	84775610	84775610	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196759992	196759992	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38750806	38750806	+	Frame_Shift_Del	DEL	G	-	-	rs141715565		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38854628	38854628	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11642265	11642265	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB14	79982	broad.mit.edu	37	4	100844368	100844368	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65864515	65864515	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	131004653	131004653	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY2	9980	broad.mit.edu	37	21	37661499	37661499	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109023181	109023181	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA3	359787	broad.mit.edu	37	12	7867686	7867686	+	Intron	SNP	C	G	G	rs141903893	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109046777	109046777	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109050827	109050827	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35225431	35225431	+	5'UTR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105463629	105463629	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113850108	113850108	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRGX	644168	broad.mit.edu	37	10	50599243	50599243	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117302210	117302210	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41539175	41539175	+	Silent	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41684035	41684035	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41725607	41725607	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	42064747	42064747	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28923407	28923407	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56492813	56492813	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32457821	32457821	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD2	285605	broad.mit.edu	37	5	118183685	118183685	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45398546	45398546	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57671874	57671874	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103057207	103057207	+	Silent	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96285425	96285425	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECD	11319	broad.mit.edu	37	10	74914000	74914000	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83360668	83360668	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB10	100130771	broad.mit.edu	37	7	105223055	105223055	+	5'Flank	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110915979	110915979	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141545586	141545586	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120820376	120820376	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120820464	120820464	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A3	9775	broad.mit.edu	37	17	78111831	78111831	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21177755	21177755	+	Missense_Mutation	SNP	C	A	A	rs34661194	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45022658	45022658	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42508131	42508131	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6903852	6903852	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOPH1	58478	broad.mit.edu	37	4	83381180	83381180	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111469592	111469592	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132534822	132534822	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPCAM	4072	broad.mit.edu	37	2	47601119	47601119	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143094631	143094631	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66356384	66356384	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97167434	97167434	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97167456	97167456	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37034182	37034182	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110293210	110293210	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103492148	103492148	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103514690	103514690	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50708780	50708781	+	Intron	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO2	157570	broad.mit.edu	37	8	27645510	27645510	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRP2	80004	broad.mit.edu	37	16	68268006	68268006	+	Nonsense_Mutation	SNP	G	C	C	rs12597504		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI2B	2124	broad.mit.edu	37	17	29632338	29632338	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11147725	11147725	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45717765	45717765	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133783725	133783725	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51425436	51425436	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM104A	84923	broad.mit.edu	37	17	71223366	71223366	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126B	285172	broad.mit.edu	37	2	201853122	201853122	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143053878	143053878	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139163754	139163754	+	Silent	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM159A	348378	broad.mit.edu	37	1	53122714	53122714	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161A	84140	broad.mit.edu	37	2	62067223	62067223	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM168A	23201	broad.mit.edu	37	11	73118706	73118706	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM168A	23201	broad.mit.edu	37	11	73118753	73118753	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM168A	23201	broad.mit.edu	37	11	73120512	73120512	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187605101	187605101	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150398827	150398827	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34962493	34962493	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029546	37029546	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114455051	114455051	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177249713	177249713	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067370	190067370	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190195291	190195291	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24850199	24850199	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65C	140876	broad.mit.edu	37	20	49209638	49209638	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43630714	43630714	+	5'UTR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90538003	90538003	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37580296	37580296	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37580383	37580383	+	Frame_Shift_Del	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89862398	89862398	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10105580	10105580	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29463877	29463877	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99017619	99017619	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92616425	92616425	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126373662	126373662	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127595411	127595411	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127648325	127648325	+	Splice_Site	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127681105	127681105	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127782300	127782300	+	Splice_Site	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO24	26261	broad.mit.edu	37	7	100184350	100184350	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO34	55030	broad.mit.edu	37	14	55765774	55765774	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17892001	17892001	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125131773	125131773	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155487824	155487824	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD4	121512	broad.mit.edu	37	12	32751515	32751515	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14862391	14862391	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102671010	102671010	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFRL1	53834	broad.mit.edu	37	4	1018200	1018200	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34266982	34266982	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34335151	34335151	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9	11328	broad.mit.edu	37	7	33020067	33020067	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152284173	152284173	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ25363	401082	broad.mit.edu	37	3	109190532	109190532	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84532371	84532371	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240307675	240307675	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240555900	240555900	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL1	752	broad.mit.edu	37	17	43322570	43322570	+	Intron	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTB	2342	broad.mit.edu	37	14	65527989	65527989	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ3	22887	broad.mit.edu	37	1	42654378	42654378	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN4	121643	broad.mit.edu	37	12	109724462	109724462	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXO3	2309	broad.mit.edu	37	6	108939443	108939443	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114293954	114293954	+	Intron	SNP	G	C	C	rs115129935	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXS1	2307	broad.mit.edu	37	20	30433374	30433374	+	Translation_Start_Site	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39263777	39263777	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85950546	85950546	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131214383	131214383	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37731137	37731137	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12725092	12725092	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48553511	48553511	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL4	23105	broad.mit.edu	37	5	132569153	132569153	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FST	10468	broad.mit.edu	37	5	52781494	52781494	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180667013	180667013	+	Splice_Site	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180679407	180679407	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP1	10146	broad.mit.edu	37	5	151173720	151173720	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46053639	46053639	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27586134	27586134	+	Intron	SNP	G	T	T	rs73365231	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69787507	69787507	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALT	2592	broad.mit.edu	37	9	34648934	34648934	+	Intron	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAR1	54433	broad.mit.edu	37	4	110743587	110743587	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53363677	53363677	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34022057	34022057	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM1	85476	broad.mit.edu	37	3	158363924	158363924	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55198740	55198740	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34934557	34934557	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP2	26157	broad.mit.edu	37	7	150389659	150389659	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150167962	150167962	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150174463	150174463	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134244036	134244036	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42085017	42085017	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIS1	148979	broad.mit.edu	37	1	54060350	54060350	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRX5	51218	broad.mit.edu	37	14	96010235	96010235	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129373266	129373266	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155654099	155654099	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA12	2768	broad.mit.edu	37	7	2834839	2834839	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB1L	54584	broad.mit.edu	37	22	19776223	19776223	+	3'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNE	10020	broad.mit.edu	37	9	36229173	36229173	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNGT1	2792	broad.mit.edu	37	7	93536065	93536065	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6B	55889	broad.mit.edu	37	15	72953689	72953689	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167761305	167761305	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLPH3	64083	broad.mit.edu	37	5	32126342	32126342	+	Silent	SNP	C	G	G	rs147714399		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58750105	58750105	+	Intron	SNP	C	A	A	rs149183005	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20331193	20331193	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42475265	42475265	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42475368	42475368	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135430934	135430934	+	Missense_Mutation	SNP	C	T	T	rs141778568	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135455157	135455157	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135455294	135455294	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46824577	46824577	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043061	20043061	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131487629	131487629	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR19	2842	broad.mit.edu	37	12	12814875	12814875	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR19	2842	broad.mit.edu	37	12	12815044	12815044	+	Silent	SNP	G	A	A	rs143793074		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR19	2842	broad.mit.edu	37	12	12815046	12815046	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR19	2842	broad.mit.edu	37	12	12815116	12815116	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR19	2842	broad.mit.edu	37	12	12815160	12815160	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133246450	133246450	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97246829	97246829	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX5	2880	broad.mit.edu	37	6	28499572	28499572	+	Missense_Mutation	SNP	G	C	C	rs149572375		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10136084	10136090	+	Frame_Shift_Del	DEL	AAGAACC	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87487604	87487604	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94377047	94377047	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102376480	102376480	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120707556	120707556	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7188115	7188115	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7340467	7340467	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173904	126173904	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRTP1	79774	broad.mit.edu	37	13	114005344	114005344	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSR	2936	broad.mit.edu	37	8	30539656	30539656	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110214125	110214125	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM5	2949	broad.mit.edu	37	1	110256121	110256121	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27499680	27499680	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108719259	108719259	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMB	3002	broad.mit.edu	37	14	25101352	25101352	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H3F3B	3021	broad.mit.edu	37	17	73775080	73775080	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACL1	26061	broad.mit.edu	37	3	15631042	15631042	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26416385	26416385	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26453225	26453225	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAGH	3029	broad.mit.edu	37	16	1872291	1872291	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS	3035	broad.mit.edu	37	5	140054305	140054305	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5566773	5566773	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121351227	121351227	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55120106	55120106	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114279889	114279889	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC3	8841	broad.mit.edu	37	5	141014298	141014298	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240066124	240066124	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48190850	48190850	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18869188	18869188	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18875231	18875231	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156713537	156713537	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156714213	156714213	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR3	55027	broad.mit.edu	37	16	50118314	50118314	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMK1	51409	broad.mit.edu	37	3	50617250	50617250	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMK1	51409	broad.mit.edu	37	3	50617272	50617272	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65480010	65480010	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65480070	65480070	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28510945	28510945	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91742270	91742270	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210536154	210536154	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBADH	11112	broad.mit.edu	37	7	27668979	27668979	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK3	10114	broad.mit.edu	37	11	33308507	33308507	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1T	3010	broad.mit.edu	37	6	26108121	26108121	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124671	26124671	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148791111	148791111	+	Splice_Site	SNP	T	C	C	rs138362499		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186034450	186034450	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186089058	186089058	+	Intron	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186141245	186141245	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN1	3150	broad.mit.edu	37	21	40720186	40720186	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGXB4	10042	broad.mit.edu	37	22	35661015	35661015	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGXB4	10042	broad.mit.edu	37	22	35661072	35661072	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMMR	3161	broad.mit.edu	37	5	162900478	162900478	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76452273	76452273	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPH1	3187	broad.mit.edu	37	5	179048121	179048121	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPU	3192	broad.mit.edu	37	1	245017937	245017937	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPGDS	27306	broad.mit.edu	37	4	95239050	95239050	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS5	117245	broad.mit.edu	37	11	63230947	63230947	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH4	59340	broad.mit.edu	37	18	22057268	22057269	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB2P	391634	broad.mit.edu	37	4	13338207	13338207	+	RNA	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31724148	31724148	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1A	3350	broad.mit.edu	37	5	63256905	63256905	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3B	9177	broad.mit.edu	37	11	113775684	113775684	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA4	203100	broad.mit.edu	37	8	38835503	38835503	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3137637	3137637	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95022602	95022602	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82924239	82924239	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDI2	91734	broad.mit.edu	37	10	1066897	1066897	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44	10561	broad.mit.edu	37	1	79119870	79119870	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1613987	1613987	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27693997	27693997	+	Intron	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT81	28981	broad.mit.edu	37	12	110628658	110628658	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160505029	160505029	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130417006	130417006	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RA	53832	broad.mit.edu	37	6	137332383	137332383	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155239571	155239571	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62237296	62237296	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62365226	62365226	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15198741	15198741	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1527663	1527663	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO11	51194	broad.mit.edu	37	5	61923142	61923142	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCA1	79781	broad.mit.edu	37	2	237272522	237272522	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	272696	272696	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66610874	66610874	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRGC	56269	broad.mit.edu	37	19	44223193	44223193	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	32990275	32990275	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42466541	42466541	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182339987	182339987	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495338	30495338	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31277365	31277365	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7785208	7785208	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7657998	7657998	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156608074	156608074	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35239718	35239719	+	Intron	DNP	TG	GT	GT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVD	3712	broad.mit.edu	37	15	40708234	40708234	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD7-PLA2G4B	8681	broad.mit.edu	37	15	42139582	42139582	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032746	30032746	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA5	3741	broad.mit.edu	37	12	5155205	5155205	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC2	3747	broad.mit.edu	37	12	75434879	75434879	+	Nonstop_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61607429	61607429	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ8	3764	broad.mit.edu	37	12	21919187	21919187	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK13	56659	broad.mit.edu	37	14	90651285	90651285	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62038676	62038676	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62078084	62078084	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS2	3788	broad.mit.edu	37	8	99440295	99440295	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELR1	10945	broad.mit.edu	37	19	48892941	48892941	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137727215	137727215	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	7015830	7015830	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6A	7403	broad.mit.edu	37	X	44969432	44969432	+	Frame_Shift_Del	DEL	T	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136637454	136637454	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0125	9834	broad.mit.edu	37	14	106369436	106369436	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0317	9870	broad.mit.edu	37	14	75142581	75142581	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0391	9692	broad.mit.edu	37	14	35731876	35731876	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0391	9692	broad.mit.edu	37	14	35732111	35732111	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15694695	15694695	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43897391	43897391	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27788410	27788410	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8785985	8785985	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95539232	95539232	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226446722	226446722	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36859598	36859598	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869444	36869447	+	Frame_Shift_Del	DEL	GTGG	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73962057	73962057	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF25	3834	broad.mit.edu	37	6	168445427	168445427	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55044078	55044079	+	Intron	INS	-	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC7A	127707	broad.mit.edu	37	1	18808542	18808542	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202880399	202880399	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL22	84861	broad.mit.edu	37	22	20805970	20805970	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86868838	86868838	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL9	55958	broad.mit.edu	37	9	21334826	21334826	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK8	11202	broad.mit.edu	37	19	51499412	51499412	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241725669	241725669	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160253517	160253517	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA5	3841	broad.mit.edu	37	6	117013443	117013443	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-5	386680	broad.mit.edu	37	21	46000336	46000336	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-6	386674	broad.mit.edu	37	21	46011972	46011972	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP22-1	337979	broad.mit.edu	37	21	31973475	31973475	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-9	3846	broad.mit.edu	37	11	71259944	71259944	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-1	337966	broad.mit.edu	37	21	31986066	31986066	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62677093	62677093	+	3'UTR	SNP	C	G	G	rs79364597		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL2	83746	broad.mit.edu	37	22	41605590	41605590	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL	26013	broad.mit.edu	37	20	42164412	42164412	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACRT	90070	broad.mit.edu	37	12	55024687	55024687	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR2	3904	broad.mit.edu	37	19	55019476	55019476	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60889909	60889909	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119575692	119575692	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT2	7462	broad.mit.edu	37	7	73630349	73630357	+	In_Frame_Del	DEL	TGGTGCTGT	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1F	353137	broad.mit.edu	37	1	152748972	152748972	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169685927	169685927	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136555643	136555643	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHA	3939	broad.mit.edu	37	11	18424527	18424527	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD1	388633	broad.mit.edu	37	1	54483820	54483820	+	5'Flank	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109086290	109086290	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109088893	109088893	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPRE1	64175	broad.mit.edu	37	1	43215927	43215927	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL1	55214	broad.mit.edu	37	3	189704525	189704525	+	Intron	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9C	654346	broad.mit.edu	37	17	18391147	18391147	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71973992	71973992	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGSN	51557	broad.mit.edu	37	6	63990290	63990290	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	103969375	103969375	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55107416	55107416	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54783404	54783404	+	Missense_Mutation	SNP	C	A	A	rs140970769		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105474275	105474275	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156476920	156476920	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD2	442721	broad.mit.edu	37	7	123296091	123296091	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45636954	45636954	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132200526	132200526	+	Silent	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132202280	132202280	+	5'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440563	440563	broad.mit.edu	37	1	13183415	13183415	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC494141	494141	broad.mit.edu	37	11	18231409	18231409	+	RNA	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC494141	494141	broad.mit.edu	37	11	18231859	18231859	+	RNA	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644936	644936	broad.mit.edu	37	5	79595430	79595430	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50375432	50375432	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75812828	75812828	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23040618	23040618	+	RNA	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23040815	23040815	+	RNA	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23162091	23162091	+	RNA	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100915784	100915784	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR4	2846	broad.mit.edu	37	X	78011436	78011436	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1488651	1488651	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62812636	62812636	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN3	64900	broad.mit.edu	37	20	39976176	39976176	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH1	23143	broad.mit.edu	37	13	47279214	47279214	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100174741	100174741	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141027886	141027886	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141108599	141108599	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141474375	141474375	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57588394	57588394	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57590051	57590051	+	Silent	SNP	C	A	A	rs143084495	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170060866	170060866	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30348281	30348281	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC40	55631	broad.mit.edu	37	1	70654875	70654875	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC59	55379	broad.mit.edu	37	17	48462737	48462737	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85449828	85449828	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40697715	40697715	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSS	4047	broad.mit.edu	37	21	47647672	47647672	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTS2	84445	broad.mit.edu	37	10	102763281	102763281	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2108767	2108767	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA1	4100	broad.mit.edu	37	X	152481991	152481991	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA6	4105	broad.mit.edu	37	X	151869542	151869542	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA8	4107	broad.mit.edu	37	X	149013559	149013559	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB3	4114	broad.mit.edu	37	X	30254210	30254210	+	Silent	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26212996	26212996	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995831	140995831	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140969466	140969466	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114189153	114189153	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109155485	109155485	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75654118	75654118	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210558419	210558419	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D1	55700	broad.mit.edu	37	1	36640515	36640515	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44067477	44067477	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16067691	16067691	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220799633	220799633	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST4	375449	broad.mit.edu	37	5	66055638	66055638	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD2	8932	broad.mit.edu	37	18	51729159	51729159	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD5	55777	broad.mit.edu	37	2	149247498	149247498	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBLAC2	153364	broad.mit.edu	37	5	89770088	89770088	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC2R	4158	broad.mit.edu	37	18	13884563	13884563	+	3'UTR	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119183321	119183321	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138713553	138713553	+	Splice_Site	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6335040	6335040	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70360843	70360843	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3297003	3297004	+	Intron	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126791128	126791128	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF6	1953	broad.mit.edu	37	1	3410313	3410313	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42861611	42861611	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT11D1	64745	broad.mit.edu	37	14	21465051	21465051	+	3'UTR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFHAS1	9258	broad.mit.edu	37	8	8643648	8643648	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFN1	55669	broad.mit.edu	37	3	179104264	179104264	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFN1	55669	broad.mit.edu	37	3	179104270	179104270	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFRP	83552	broad.mit.edu	37	11	119212634	119212634	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141776493	141776493	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1179	100302235	broad.mit.edu	37	15	89151249	89151249	+	5'Flank	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR495	574453	broad.mit.edu	37	14	101500050	101500050	+	5'Flank	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR509-3	100126337	broad.mit.edu	37	X	146341228	146341228	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129913972	129913972	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLC1	23209	broad.mit.edu	37	22	50523201	50523201	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49420271	49420271	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151853437	151853437	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945153	151945153	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945231	151945231	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL5	55904	broad.mit.edu	37	7	104749463	104749463	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	21884230	21884230	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT1	4298	broad.mit.edu	37	19	6222228	6222228	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP19	4327	broad.mit.edu	37	12	56230705	56230705	+	3'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44644779	44644779	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC1	64757	broad.mit.edu	37	1	220970054	220970054	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC2	54996	broad.mit.edu	37	1	220935310	220935310	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50573048	50573048	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132649476	132649476	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13137969	13137969	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13221528	13221528	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH10	10199	broad.mit.edu	37	2	71357404	71357404	+	5'Flank	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20237249	20237249	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAP2	112609	broad.mit.edu	37	6	84799294	84799294	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC1	4360	broad.mit.edu	37	10	18138749	18138749	+	Intron	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX4	117196	broad.mit.edu	37	11	18194908	18194908	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL51	51258	broad.mit.edu	37	12	6602071	6602071	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A1	931	broad.mit.edu	37	11	60235735	60235735	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59857958	59857958	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59942819	59942819	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754968	72754968	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47690262	47690262	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF1	4520	broad.mit.edu	37	1	38300630	38300630	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93575769	93575769	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11182049	11182049	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8997117	8997118	+	Splice_Site	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9060907	9060907	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9070227	9070227	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9074029	9074029	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9090985	9090985	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235848	3235848	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77786258	77786258	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108158799	108158799	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10398693	10398693	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10435284	10435284	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23888489	23888489	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10304093	10304093	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10317485	10317485	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL7	58498	broad.mit.edu	37	7	44179064	44179064	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123417088	123417088	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16671657	16671657	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109438076	109438076	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109562599	109562599	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109753146	109753146	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128393797	128393797	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171607703	171607703	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOD1	4654	broad.mit.edu	37	11	17741348	17741348	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM1	8736	broad.mit.edu	37	18	3116307	3116307	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2092729	2092729	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926884	1926884	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41933097	41933097	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89891256	89891256	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89896521	89896521	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL1	10004	broad.mit.edu	37	11	64821818	64821818	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAF1	92345	broad.mit.edu	37	4	164061457	164061457	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPSA	9476	broad.mit.edu	37	19	50862710	50862710	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20129113	20129113	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15378564	15378564	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47044463	47044463	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35684977	35684977	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144618400	144618400	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134078733	134078733	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97031791	97031791	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54921838	54921838	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133542855	133542855	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24914295	24914295	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24929407	24929407	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46256777	46256777	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46256799	46256799	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124824973	124824973	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180475	161180475	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47117102	47117102	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAT5	10725	broad.mit.edu	37	16	69724898	69724898	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIL3	4783	broad.mit.edu	37	9	94173119	94173119	+	5'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129746672	129746672	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEJ1	79840	broad.mit.edu	37	2	219942155	219942155	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPA1	123606	broad.mit.edu	37	15	23052736	23052736	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173998675	173998675	+	Nonsense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN2	57555	broad.mit.edu	37	17	7321156	7321156	+	3'UTR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5811136	5811136	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56424211	56424211	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7070902	7070902	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55505858	55505858	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588857	247588857	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588913	247588913	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56572759	56572759	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56223777	56223777	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56244354	56244354	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43615931	43615931	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96099595	96099595	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30475652	30475652	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD2	64127	broad.mit.edu	37	16	50745464	50745464	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL10	79954	broad.mit.edu	37	2	10729165	10729165	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14980810	14980810	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120478062	120478062	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100106320	100106320	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69339717	69339717	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC2	10577	broad.mit.edu	37	14	74959988	74959988	+	5'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73012886	73012886	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM1	4869	broad.mit.edu	37	5	170819787	170819787	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34724315	34724315	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C1	7181	broad.mit.edu	37	12	95453709	95453709	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129317534	129317534	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129350356	129350356	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105190361	105190361	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6620270	6620271	+	Missense_Mutation	DNP	CC	AA	AA	rs140003855	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN3	63899	broad.mit.edu	37	3	93802941	93802941	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132016339	132016339	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87360083	87360083	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD3	23386	broad.mit.edu	37	7	44524670	44524670	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	153974177	153974177	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102334864	102334864	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102347901	102347901	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYX	60506	broad.mit.edu	37	X	41334056	41334056	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28196864	28196864	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF2	4957	broad.mit.edu	37	9	131231635	131231635	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167626894	167626894	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD1	55239	broad.mit.edu	37	16	56504618	56504618	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM1	10439	broad.mit.edu	37	9	137998651	137998651	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53608428	53608428	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML1	283298	broad.mit.edu	37	11	7530705	7530705	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLIG3	167826	broad.mit.edu	37	6	137815202	137815202	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OOEP	441161	broad.mit.edu	37	6	74079496	74079496	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900895	123900895	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57995755	57995755	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158548836	158548836	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H4	390442	broad.mit.edu	37	14	20711609	20711609	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13F1	138805	broad.mit.edu	37	9	107266505	107266505	+	5'Flank	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J2	26740	broad.mit.edu	37	9	125273228	125273228	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1M1	125963	broad.mit.edu	37	19	9204347	9204347	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57970865	57970865	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AG1	144125	broad.mit.edu	37	11	6807219	6807220	+	3'UTR	DNP	GG	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B2	81697	broad.mit.edu	37	6	27879654	27879654	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343636	248343636	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756151	248756151	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248458109	248458109	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D2	124538	broad.mit.edu	37	17	56247937	56247937	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20444457	20444457	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55405905	55405905	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4843137	4843137	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809298	5809298	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563206	55563206	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703124	55703124	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55594977	55594977	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M8	219484	broad.mit.edu	37	11	56258197	56258197	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55715183	55715183	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158735635	158735635	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6S1	341799	broad.mit.edu	37	14	21108870	21108870	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G1	125962	broad.mit.edu	37	19	9225412	9225412	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8D2	283160	broad.mit.edu	37	11	124189498	124189498	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890477	55890477	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55860792	55860792	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48919816	48919816	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9Q1	219956	broad.mit.edu	37	11	57947084	57947084	+	Missense_Mutation	SNP	C	A	A	rs141876179	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59345542	59345542	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTP	23440	broad.mit.edu	37	5	76932657	76932657	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7A	161725	broad.mit.edu	37	15	32058305	32058305	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29639183	29639183	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41805607	41805607	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25835776	25835776	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1L	80336	broad.mit.edu	37	20	43559182	43559182	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90691123	90691123	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP2	51247	broad.mit.edu	37	5	138700367	138700367	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9561435	9561435	+	Frame_Shift_Del	DEL	C	-	-	rs142065974	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112705113	112705113	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35463205	35463205	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARG	8505	broad.mit.edu	37	10	51472680	51472680	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226568667	226568667	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44584862	44584862	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223160401	223160401	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	18962878	18962879	+	Intron	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBLD	64081	broad.mit.edu	37	10	70048653	70048653	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBD2	84105	broad.mit.edu	37	5	134303795	134303795	+	3'UTR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	100925576	100925576	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072243	134072244	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134084318	134084318	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55568824	55568825	+	Missense_Mutation	DNP	TG	GT	GT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58209170	58209170	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH20	64881	broad.mit.edu	37	13	61986227	61986227	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140166214	140166214	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140183206	140183206	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140187260	140187260	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140207688	140207688	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140209902	140209902	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA9	9752	broad.mit.edu	37	5	140229524	140229524	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB11	56125	broad.mit.edu	37	5	140580428	140580429	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537254	140537254	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB19P	84054	broad.mit.edu	37	5	140621551	140621551	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB19P	84054	broad.mit.edu	37	5	140621666	140621666	+	3'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB1	29930	broad.mit.edu	37	5	140433275	140433275	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140503371	140503371	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140712427	140712427	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140720491	140720491	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140754602	140754602	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140755009	140755009	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA7	56108	broad.mit.edu	37	5	140764324	140764324	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544191	82544191	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK1	5122	broad.mit.edu	37	5	95728688	95728688	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14695563	14695563	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE5A	8654	broad.mit.edu	37	4	120442041	120442041	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76709008	76709008	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103797775	103797775	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA6	10130	broad.mit.edu	37	2	10933296	10933296	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73433185	73433185	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41967324	41967324	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEA15	8682	broad.mit.edu	37	1	160181327	160181327	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179605481	179605481	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB4	5210	broad.mit.edu	37	3	48575973	48575973	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49753978	49753978	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP2	114770	broad.mit.edu	37	19	15579494	15579494	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153270489	153270489	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22112124	22112124	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22263446	22263446	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF23	79142	broad.mit.edu	37	17	7138841	7138841	+	3'UTR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71701199	71701199	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36929364	36929364	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIBF1	10464	broad.mit.edu	37	13	73401819	73401819	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIBF1	10464	broad.mit.edu	37	13	73401828	73401828	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGW	284098	broad.mit.edu	37	17	34894341	34894341	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R1	5295	broad.mit.edu	37	5	67584462	67584462	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3638834	3638834	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110451183	110451183	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51612989	51612989	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8782714	8782714	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB2	5330	broad.mit.edu	37	15	40582700	40582700	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155206539	155206539	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198965951	198965951	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171395355	171395355	+	Splice_Site	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4712637	4712637	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145011086	145011086	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	162943	162943	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG5	57449	broad.mit.edu	37	1	6533259	6533259	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68607999	68607999	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161159688	161159688	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN2	123	broad.mit.edu	37	9	19116449	19116449	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC1	57125	broad.mit.edu	37	17	37226111	37226111	+	Missense_Mutation	SNP	C	T	T	rs151120531	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132192229	132192229	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50724456	50724456	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50724537	50724537	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129284183	129284183	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190719864	190719864	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118364835	118364835	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPO	55163	broad.mit.edu	37	17	46023907	46023907	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113305083	113305083	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3E	55718	broad.mit.edu	37	16	22330212	22330212	+	Silent	SNP	C	T	T	rs58061211		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3H	171568	broad.mit.edu	37	22	41926752	41926752	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L9P	29774	broad.mit.edu	37	22	24655997	24655997	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46660384	46660384	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832523	130832523	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19553819	19553819	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU4F1	5457	broad.mit.edu	37	13	79175510	79175510	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81746848	81746848	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3A	5523	broad.mit.edu	37	3	135774401	135774401	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5A	5525	broad.mit.edu	37	1	212526428	212526428	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12884937	12884937	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12887653	12887653	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF5	343068	broad.mit.edu	37	1	13014868	13014868	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70978624	70978624	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47265957	47265957	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47268179	47268179	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68942927	68942927	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69018602	69018602	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54396517	54396517	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD3	23683	broad.mit.edu	37	2	37494536	37494536	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48719705	48719705	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKRIP1	79706	broad.mit.edu	37	7	102045135	102045135	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRODH2	58510	broad.mit.edu	37	19	36304010	36304010	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROSC	11212	broad.mit.edu	37	8	37635389	37635389	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRT1	80863	broad.mit.edu	37	6	32117104	32117104	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460513	142460513	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS53	339105	broad.mit.edu	37	16	31095549	31095549	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139192997	139192997	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN1	5663	broad.mit.edu	37	14	73683772	73683772	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43697491	43697491	+	3'UTR	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43430573	43430573	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43269757	43269757	+	5'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40692421	40692421	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209308240	209308240	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN11	5781	broad.mit.edu	37	12	112891116	112891116	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN21	11099	broad.mit.edu	37	14	88934347	88934347	+	3'UTR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668740	198668740	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8507349	8507349	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40911205	40911205	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119509436	119509436	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL2	5819	broad.mit.edu	37	19	45389236	45389236	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52336217	52336217	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74286109	74286109	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32990724	32990724	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154493666	154493666	+	5'UTR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220335623	220335623	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5A	5868	broad.mit.edu	37	3	20016990	20016990	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5B	5869	broad.mit.edu	37	12	56374196	56374196	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5B	5869	broad.mit.edu	37	12	56380979	56380979	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABEP2	79874	broad.mit.edu	37	16	28922320	28922320	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD21	5885	broad.mit.edu	37	8	117870687	117870687	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD23B	5887	broad.mit.edu	37	9	110062546	110062547	+	Intron	DEL	TC	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAET1L	154064	broad.mit.edu	37	6	150342354	150342354	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI1	10743	broad.mit.edu	37	17	17701750	17701750	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109384690	109384690	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP6	26953	broad.mit.edu	37	9	6012421	6012421	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	131034600	131034600	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80381788	80381788	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL2	5934	broad.mit.edu	37	16	53487410	53487410	+	Silent	SNP	C	T	T	rs140105334		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155153150	155153150	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM7	10179	broad.mit.edu	37	11	114271501	114271501	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48388080	48388080	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49089625	49089625	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC1	1104	broad.mit.edu	37	1	28862433	28862433	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP6	92840	broad.mit.edu	37	19	1495329	1495329	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79350089	79350089	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103194238	103194238	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103234751	103234751	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103363606	103363606	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPIN1	29803	broad.mit.edu	37	7	150069696	150069696	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFPL2	10739	broad.mit.edu	37	22	32589121	32589121	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108496696	108496696	+	Intron	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72431597	72431597	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72932426	72932426	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241100015	241100015	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25717432	25717432	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB3	22836	broad.mit.edu	37	5	95103984	95103984	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB3	22836	broad.mit.edu	37	5	95104730	95104730	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39074222	39074222	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72947557	72947557	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104671487	104671487	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104898002	104898002	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40554006	40554006	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLN3	117579	broad.mit.edu	37	19	14139278	14139278	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE11	122651	broad.mit.edu	37	14	21052079	21052079	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE13	440163	broad.mit.edu	37	14	21502310	21502310	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49735535	49735535	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF145	153830	broad.mit.edu	37	5	158634607	158634607	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF25	64320	broad.mit.edu	37	2	219528862	219528862	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF26	79102	broad.mit.edu	37	11	119206115	119206115	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF7	9616	broad.mit.edu	37	3	141457359	141457359	+	Splice_Site	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78663903	78663903	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77147352	77147352	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124747092	124747092	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL23A	6147	broad.mit.edu	37	17	27050632	27050632	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL41	6171	broad.mit.edu	37	12	56510644	56510644	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL5	6125	broad.mit.edu	37	1	93306072	93306072	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL7L1	285855	broad.mit.edu	37	6	42851245	42851245	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS14	6208	broad.mit.edu	37	5	149826406	149826406	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS23	6228	broad.mit.edu	37	5	81573446	81573446	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS27L	51065	broad.mit.edu	37	15	63449499	63449499	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM2	6241	broad.mit.edu	37	2	10263908	10263908	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM2	6241	broad.mit.edu	37	2	10264019	10264019	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM2	6241	broad.mit.edu	37	2	10264847	10264847	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99126286	99126286	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100732078	100732078	+	Splice_Site	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTF1	23168	broad.mit.edu	37	15	41769591	41769591	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN3	10313	broad.mit.edu	37	11	63487182	63487182	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38931492	38931492	+	Silent	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38976798	38976798	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34030868	34030868	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101704852	101704852	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR5	53637	broad.mit.edu	37	19	10625652	10625652	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAE1	10055	broad.mit.edu	37	19	47706943	47706943	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB2	9667	broad.mit.edu	37	19	5592837	5592837	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB	6294	broad.mit.edu	37	19	5647925	5647925	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAG	6295	broad.mit.edu	37	2	234247425	234247425	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP30L	79685	broad.mit.edu	37	5	153835564	153835564	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200137156	200137156	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78167670	78167670	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51981348	51981348	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1A1	7356	broad.mit.edu	37	11	62186609	62186609	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLY	51540	broad.mit.edu	37	2	238990303	238990303	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18274796	18274796	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML4	256380	broad.mit.edu	37	6	108067985	108067985	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166900551	166900551	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166179847	166179847	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166201146	166201146	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38592196	38592196	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1A	6337	broad.mit.edu	37	12	6483728	6483728	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRIB	23513	broad.mit.edu	37	8	144874231	144874231	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDAD1	55153	broad.mit.edu	37	4	76885364	76885364	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP2	727956	broad.mit.edu	37	3	195400791	195400791	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4027036	4027036	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108224056	108224056	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151337871	151337871	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84651811	84651811	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115783374	115783374	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151111780	151111780	+	Intron	SNP	C	A	A	rs34522285		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101051736	101051736	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT11	55752	broad.mit.edu	37	4	77926984	77926984	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA12	145264	broad.mit.edu	37	14	94964298	94964298	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA1	5265	broad.mit.edu	37	14	94849012	94849012	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA7	6906	broad.mit.edu	37	X	105280371	105280371	+	Intron	DEL	A	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533253	42533253	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47161676	47161676	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF4	57794	broad.mit.edu	37	19	19413017	19413017	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	32012689	32012689	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP4	6424	broad.mit.edu	37	7	37951670	37951670	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67147924	67147924	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67206943	67206943	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471964	77471964	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77472167	77472167	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK494	124923	broad.mit.edu	37	17	26938471	26938471	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156779494	156779494	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3A	10045	broad.mit.edu	37	19	6754663	6754663	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2833710	2833710	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148406269	148406269	+	Silent	SNP	C	T	T	rs145528276	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC2	25759	broad.mit.edu	37	19	430632	430632	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT1	6470	broad.mit.edu	37	17	18239033	18239033	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX2	6474	broad.mit.edu	37	3	157820469	157820469	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51629379	51629379	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SILV	6490	broad.mit.edu	37	12	56355294	56355294	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT7	51547	broad.mit.edu	37	17	79872368	79872369	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIX2	10736	broad.mit.edu	37	2	45233412	45233412	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164735801	164735801	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54640386	54640386	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103703866	103703866	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56903835	56903835	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100458938	100458938	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A7	57030	broad.mit.edu	37	19	49938490	49938490	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50820238	50820238	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38316296	38316296	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107341478	107341478	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85438606	85438606	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A10	81031	broad.mit.edu	37	20	45355470	45355470	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A3	6515	broad.mit.edu	37	12	8075436	8075437	+	Frame_Shift_Ins	INS	-	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25669550	25669550	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A3	54946	broad.mit.edu	37	3	125741824	125741824	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947355	33947355	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A4	57210	broad.mit.edu	37	8	142228200	142228200	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72121090	72121090	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72121092	72121092	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24881343	24881343	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10885924	10885924	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A12	6539	broad.mit.edu	37	12	305962	305962	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40655828	40655828	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103090357	103090357	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48497448	48497448	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21422677	21422677	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN11	91607	broad.mit.edu	37	17	33679766	33679766	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN5	162394	broad.mit.edu	37	17	33591742	33591742	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFNL1	200172	broad.mit.edu	37	1	41486213	41486213	+	Silent	SNP	G	C	C	rs146820397	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98781170	98781170	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20523994	20523994	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLURP1	57152	broad.mit.edu	37	8	143823209	143823209	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56563372	56563372	+	Missense_Mutation	SNP	C	T	T	rs144543721	byFrequency	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56567335	56567335	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56567337	56567337	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD1	6602	broad.mit.edu	37	12	50492589	50492589	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2707922	2707922	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128846155	128846155	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD3	55512	broad.mit.edu	37	16	68398640	68398640	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMR3B	10879	broad.mit.edu	37	4	71255744	71255744	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD5	10322	broad.mit.edu	37	2	73450336	73450336	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCA	6622	broad.mit.edu	37	4	90749385	90749385	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-8	767584	broad.mit.edu	37	14	101429514	101429514	+	5'Flank	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25463836	25463836	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25476086	25476086	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP48	154007	broad.mit.edu	37	6	7595342	7595342	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX16	64089	broad.mit.edu	37	8	82719931	82719931	+	Intron	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX27	81609	broad.mit.edu	37	1	151640909	151640909	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX4	8723	broad.mit.edu	37	3	125216876	125216876	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106917010	106917010	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107005172	107005172	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23893750	23893750	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP4	6671	broad.mit.edu	37	7	21516717	21516717	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214215336	214215336	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN1	494118	broad.mit.edu	37	X	144337175	144337175	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220338272	220338272	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPESP1	246777	broad.mit.edu	37	15	69238346	69238346	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD3	84926	broad.mit.edu	37	12	53468351	53468351	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55652826	55652826	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55653297	55653297	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149485820	149485821	+	Intron	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52659112	52659112	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045828	53045828	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107460128	107460128	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC6	30815	broad.mit.edu	37	9	130653383	130653383	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68449311	68449311	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK17B	9262	broad.mit.edu	37	2	197008376	197008376	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK39	27347	broad.mit.edu	37	2	168920185	168920185	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA6	64220	broad.mit.edu	37	15	74487672	74487672	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37095030	37095030	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37096801	37096801	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STUB1	10273	broad.mit.edu	37	16	731479	731479	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX1A	6804	broad.mit.edu	37	7	73123236	73123236	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP3	6814	broad.mit.edu	37	1	109318934	109318934	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2A1	6822	broad.mit.edu	37	19	48382217	48382217	+	Intron	SNP	C	A	A	rs73942754	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF1	285362	broad.mit.edu	37	3	4490806	4490806	+	Intron	DEL	C	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113173599	113173599	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE1	85360	broad.mit.edu	37	19	15224170	15224170	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46352129	46352129	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46355610	46355610	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46355787	46355787	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46357405	46357405	+	Intron	SNP	C	G	G	rs114005555	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN2	6854	broad.mit.edu	37	3	12112728	12112728	+	Intron	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152501209	152501209	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152679590	152679590	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152746527	152746527	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45274079	45274079	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40854188	40854188	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123845089	123845089	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32632339	32632339	+	Missense_Mutation	SNP	C	T	T	rs145748175	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234584263	234584263	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN2	9797	broad.mit.edu	37	3	10301805	10301806	+	Intron	INS	-	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D15	64786	broad.mit.edu	37	12	72288199	72288199	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9651934	9651934	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX10	347853	broad.mit.edu	37	11	67400631	67400631	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX4	9496	broad.mit.edu	37	17	59543393	59543393	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TC2N	123036	broad.mit.edu	37	14	92251584	92251584	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA1	6917	broad.mit.edu	37	8	54885026	54885026	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF21	6943	broad.mit.edu	37	6	134210674	134210674	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152082950	152082950	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96137667	96137667	+	Splice_Site	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	120998690	120998690	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27183579	27183579	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20841524	20841524	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20841762	20841762	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20841812	20841812	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20841881	20841881	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20843947	20843947	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20864787	20864787	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20876171	20876171	+	Missense_Mutation	SNP	C	T	T	rs111250999		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30694318	30694318	+	Splice_Site	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX2	55852	broad.mit.edu	37	17	62228151	62228151	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2L1	29842	broad.mit.edu	37	2	121995289	121995289	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGDS	23483	broad.mit.edu	37	13	95231010	95231010	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2377157	2377157	+	Missense_Mutation	SNP	G	T	T	rs143085842	byFrequency;by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134145810	134145810	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632688	169632688	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632746	169632746	+	Intron	SNP	C	A	A	rs78842639	byFrequency;by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11676433	11676433	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32492988	32492988	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK2	11011	broad.mit.edu	37	17	60600389	60600389	+	Intron	SNP	T	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166964408	166964409	+	Intron	INS	-	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166964506	166964506	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	167020572	167020572	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35704723	35704723	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120466850	120466850	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM100	55273	broad.mit.edu	37	17	53797959	53797959	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98446204	98446204	+	Splice_Site	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98525084	98525084	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129822344	129822344	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32965202	32965202	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM173	340061	broad.mit.edu	37	5	138858127	138858127	+	Intron	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74315540	74315540	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44107259	44107259	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68810272	68810272	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68725511	68725511	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19755900	19755900	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29724995	29724995	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29908738	29908738	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117840627	117840627	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10A	8797	broad.mit.edu	37	8	23057322	23057322	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195609965	195609965	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57076892	57076892	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24801038	24801038	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPBG	7162	broad.mit.edu	37	6	83075585	83075585	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN2	219931	broad.mit.edu	37	11	68846407	68846407	+	Silent	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1480889	1480889	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP1	1200	broad.mit.edu	37	11	6638099	6638100	+	Intron	DNP	GG	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103290630	103290630	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF1	7185	broad.mit.edu	37	9	123675735	123675735	+	Silent	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141231580	141231580	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREM1	54210	broad.mit.edu	37	6	41243988	41243988	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30134927	30134927	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30140215	30140215	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM23	373	broad.mit.edu	37	5	64907413	64907414	+	Intron	DEL	AA	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55033063	55033063	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM60	166655	broad.mit.edu	37	4	165961938	165961938	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM9	114088	broad.mit.edu	37	14	51448484	51448484	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14369074	14369074	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230661452	230661452	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230661474	230661475	+	Frame_Shift_Ins	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC1	7220	broad.mit.edu	37	3	142524944	142524944	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM7	54822	broad.mit.edu	37	15	50916388	50916388	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234873354	234873354	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234878914	234878914	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98529307	98529307	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10IP	254187	broad.mit.edu	37	11	65721100	65721100	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51872567	51872567	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769101	31769101	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAX	7257	broad.mit.edu	37	1	231700291	231700291	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSC1	7260	broad.mit.edu	37	2	3217925	3217925	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180322022	180322022	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135266129	135266129	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76330044	76330044	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76349199	76349199	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84412790	84412790	+	Intron	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179395922	179395931	+	Frame_Shift_Del	DEL	GACGGTCATG	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179404336	179404336	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179422925	179422925	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179448526	179448526	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179459287	179459287	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132237812	132237812	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB1	81027	broad.mit.edu	37	20	57599127	57599127	+	Silent	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBD	10537	broad.mit.edu	37	6	29523866	29523866	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109968313	109968313	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLNL	143630	broad.mit.edu	37	11	5537461	5537461	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCHL3	7347	broad.mit.edu	37	13	76124109	76124109	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70455443	70455443	+	Intron	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346314	70346314	+	3'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36052050	36052050	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20359692	20359692	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17750726	17750726	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54307662	54307662	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96106360	96106360	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96141040	96141040	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPB1	51733	broad.mit.edu	37	22	24891485	24891485	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215963401	215963401	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP20	10868	broad.mit.edu	37	9	132623118	132623118	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP45	85015	broad.mit.edu	37	6	99936535	99936535	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75283501	75283501	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8991000	8991000	+	Intron	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31232508	31232508	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144758697	144758697	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75727892	75727892	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75852456	75852456	+	Nonstop_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19027183	19027183	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011296	39011296	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43191226	43191226	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	69510283	69510283	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82476550	82476550	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82896910	82896910	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119473515	119473515	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	20596772	20596772	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49401124	49401124	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51459086	51459087	+	IGR	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5172641	5172641	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280150	56280150	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6015907	6015907	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71567413	71567413	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517531	82517531	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98435742	98435742	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	119633190	119633190	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	19242501	19242501	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	19566253	19566254	+	IGR	INS	-	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25956767	25956767	+	IGR	SNP	C	A	A	rs148061226	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43072776	43072776	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43072892	43072892	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43965072	43965072	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60206333	60206333	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	101409180	101409180	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532509	65532509	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19468808	19468808	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20138225	20138225	+	IGR	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22069999	22069999	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	24219556	24219556	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	35899298	35899298	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331982	45331982	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	55696199	55696199	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63590010	63590010	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35590707	35590707	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368283	32368283	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32416391	32416391	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33373234	33373234	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33402041	33402041	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33412719	33412719	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605169	33605169	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34582473	34582473	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34655362	34655362	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48883759	48883759	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	22066816	22066816	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498523	22498523	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498937	22498937	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23040505	23040505	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35874506	35874506	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53507364	53507364	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	108047983	108047983	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111866550	111866550	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146587822	146587822	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149039617	149039617	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149099747	149099747	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149101300	149101300	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	150572940	150572940	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166717336	166717336	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115759	191115759	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194159024	194159024	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	224762519	224762519	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	233971905	233971905	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902780	247902780	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79216162	79216162	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32552973	32552973	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898503	14898503	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	22200881	22200881	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	23810387	23810387	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16123192	16123192	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16414025	16414025	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	128598708	128598708	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130254151	130254151	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132796533	132796533	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162360275	162360275	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162363720	162363720	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17567009	17567009	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186411804	186411804	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	206814097	206814097	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	26373535	26373535	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872999	91872999	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91940358	91940358	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12914002	12914002	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166783586	166783586	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180605894	180605894	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	190549448	190549448	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87101580	87101580	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87372663	87372663	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90251707	90251707	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96068851	96068851	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98376621	98376621	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	118496726	118496726	+	IGR	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	122999041	122999041	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	176416890	176416890	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190395641	190395641	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57461832	57461832	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126479255	126479255	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154872125	154872125	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	154872840	154872840	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39719942	39719942	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39720198	39720198	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7291011	7291011	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	101338247	101338247	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	150299502	150299502	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603646	153603646	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	57841601	57841601	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71760987	71760987	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80776929	80776929	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100930662	100930662	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138373781	138373781	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256007	53256007	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296641	56296641	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56570509	56570509	+	IGR	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56636205	56636205	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62962773	62962773	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020549	63020549	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88195611	88195611	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9654766	9654766	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9654809	9654809	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106023700	106023700	+	IGR	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493719	120493719	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	57501164	57501164	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	71336764	71336764	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7277192	7277192	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88800876	88800876	+	IGR	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689476	30689476	+	IGR	SNP	G	C	C	rs146664654	by1000genomes	TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	38643775	38643775	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	41306212	41306212	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400768	43400768	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43609299	43609299	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66963601	66963601	+	IGR	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69501947	69501947	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477408	7477408	+	IGR	DEL	T	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	114900132	114900132	+	IGR	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115804739	115804740	+	IGR	DNP	CC	AA	AA			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127261961	127261961	+	IGR	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712159	144712159	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150395923	150395923	+	IGR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44494923	44494923	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45241021	45241021	+	IGR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48021831	48021831	+	IGR	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77913212	77913212	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6773091	6773091	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108185330	108185330	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108185332	108185332	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177605214	177605214	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VGLL3	389136	broad.mit.edu	37	3	87018166	87018166	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219288946	219288946	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R4	317703	broad.mit.edu	37	19	53770283	53770283	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN2	8875	broad.mit.edu	37	6	133072641	133072641	+	Silent	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79929647	79929647	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100789079	100789079	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62202476	62202476	+	Nonsense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184648287	184648287	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65253303	65253303	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98709612	98709612	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2L	402117	broad.mit.edu	37	2	215279359	215279359	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61036304	61036304	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF1	8936	broad.mit.edu	37	6	110424732	110424732	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224763777	224763777	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDHD1	11169	broad.mit.edu	37	14	55467193	55467193	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118492817	118492817	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118501533	118501533	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR47	22911	broad.mit.edu	37	1	109525213	109525213	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113128135	113128135	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158677335	158677335	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54358458	54358458	+	Silent	SNP	C	T	T	rs143311376		TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90258235	90258235	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK4	65266	broad.mit.edu	37	17	40948569	40948569	+	Silent	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT10A	80326	broad.mit.edu	37	2	219746998	219746998	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC1	23286	broad.mit.edu	37	5	167833149	167833149	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78389540	78389540	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102966	168102966	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168108197	168108197	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41282319	41282319	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135744683	135744683	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY2	404281	broad.mit.edu	37	X	21863482	21863482	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100364793	100364793	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100385713	100385713	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167016162	167016162	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB17	7709	broad.mit.edu	37	1	16268907	16268907	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12B	340554	broad.mit.edu	37	X	64709219	64709219	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H14	79882	broad.mit.edu	37	14	89069242	89069242	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H14	79882	broad.mit.edu	37	14	89073830	89073830	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113060967	113060967	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912982	77912982	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC8	55596	broad.mit.edu	37	12	122966661	122966661	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135614084	135614084	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72004836	72004836	+	Splice_Site	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72008575	72008575	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77619809	77619809	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP112	7771	broad.mit.edu	37	19	44901452	44901452	+	Intron	DEL	G	-	-			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN3	80317	broad.mit.edu	37	6	28327344	28327344	+	5'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMPSTE24	10269	broad.mit.edu	37	1	40758302	40758302	+	Silent	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	286917	286917	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF154	7710	broad.mit.edu	37	19	58216288	58216288	+	Silent	SNP	A	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF197	10168	broad.mit.edu	37	3	44671009	44671009	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF197	10168	broad.mit.edu	37	3	44673753	44673753	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22193724	22193724	+	5'UTR	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF213	7760	broad.mit.edu	37	16	3190663	3190663	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF25	219749	broad.mit.edu	37	10	38242063	38242063	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53311418	53311418	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF350	59348	broad.mit.edu	37	19	52477490	52477490	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF384	171017	broad.mit.edu	37	12	6777124	6777124	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF429	353088	broad.mit.edu	37	19	21720247	21720247	+	Silent	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF451	26036	broad.mit.edu	37	6	57012630	57012630	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178392158	178392158	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF461	92283	broad.mit.edu	37	19	37130807	37130807	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31047926	31047927	+	Intron	DNP	GG	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF563	147837	broad.mit.edu	37	19	12429757	12429757	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF594	84622	broad.mit.edu	37	17	5085607	5085607	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71595769	71595769	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71650945	71650945	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF700	90592	broad.mit.edu	37	19	12060182	12060182	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57522900	57522900	+	Intron	SNP	G	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF775	285971	broad.mit.edu	37	7	150094415	150094415	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF790	388536	broad.mit.edu	37	19	37309614	37309614	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801020	185801020	+	Silent	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185803016	185803016	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88956813	88956813	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF833	401898	broad.mit.edu	37	19	11777945	11777945	+	Intron	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053401	238053401	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102187772	102187772	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZZ3	26009	broad.mit.edu	37	1	78098439	78098439	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	113563607	113563607	+	Intron	SNP	A	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22983068	22983068	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21549922	21549922	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16832234	16832234	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21731374	21731374	+	3'UTR	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14219943	14219943	+	5'Flank	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22780195	22780195	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23311271	23311271	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146791333	146791333	+	Intron	SNP	C	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139045943	139045943	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62374163	62374163	+	5'Flank	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8178978	8178978	+	Intron	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89399584	89399584	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89472000	89472000	+	Intron	SNP	T	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90008086	90008086	+	RNA	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90061089	90061090	+	Intron	DNP	GC	TT	TT			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75467281	75467281	+	5'Flank	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9710653	9710653	+	5'Flank	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045545	142045545	+	Intron	SNP	C	A	A			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142206665	142206665	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142469525	142469525	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38389295	38389295	+	Intron	SNP	G	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39894134	39894134	+	RNA	SNP	C	T	T			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63816344	63816344	+	RNA	SNP	A	G	G			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48158727	48158727	+	Intron	SNP	G	C	C			TCGA-75-5126-01A-01D-1753-08	TCGA-75-5126-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
