Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ACHE	43	genome.wustl.edu	37	7	100487763	100487763	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100487763	100487763	C	T	SNP	ACHE	ENST00000357451	human	ensembl	57_37b	-1	known	missense	c.1913	p.G638E	0.998	NULL	HMMPfam_COesterase,superfamily_SSF53474,PatternScan_CARBOXYLESTERASE_B_2,PatternScan_CARBOXYLESTERASE_B_1,HMMPfam_AChE_tetra	-	no_errors
AEBP1	165	genome.wustl.edu	37	7	44152266	44152266	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44152266	44152266	C	G	SNP	AEBP1	NM_001129	human	genbank	57_37b	+1	reviewed	missense	c.2327	p.A776G	0.998	superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14	superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Carboxypeptidase regulatory domain	-	no_errors
AKAP4	8852	genome.wustl.edu	37	X	49957662	49957662	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49957662	49957662	C	T	SNP	AKAP4	NM_003886	human	genbank	57_37b	-1	reviewed	missense	c.1702	p.E568K	0.051	HMMSmart_SM00807,HMMPfam_AKAP_110	HMMSmart_SM00807,HMMPfam_RII_binding_1,HMMPfam_AKAP_110	-	no_errors
AKAP9	10142	genome.wustl.edu	37	7	91709195	91709195	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	91709195	91709195	G	C	SNP	AKAP9	NM_005751	human	genbank	57_37b	+1	reviewed	missense	c.7748	p.R2583T	0.011	NULL	PatternScan_CPSASE_2,HMMPfam_PACT_coil_coil	-	no_errors
ANKRD30B	374860	genome.wustl.edu	37	18	14782608	14782608	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	14782608	14782608	T	C	SNP	ANKRD30B	NM_001145029	human	genbank	57_37b	+1	validated	missense	c.1565	p.V522A	0.026	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
ANKS1B	56899	genome.wustl.edu	37	12	99192725	99192725	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	99192725	99192725	C	G	SNP	ANKS1B	NM_152788	human	genbank	57_37b	-1	validated	missense	c.3254	p.C1085S	1.000	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors
ARPM1	84517	genome.wustl.edu	37	3	169485849	169485849	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169485849	169485849	T	A	SNP	ARPM1	NM_032487	human	genbank	57_37b	-1	validated	missense	c.490	p.I164F	1.000	HMMSmart_ACTIN,HMMPfam_Actin,superfamily_SSF53067	superfamily_SSF53067,HMMSmart_ACTIN,HMMPfam_Actin,PatternScan_ACTINS_ACT_LIKE	-	no_errors
ARRDC2	27106	genome.wustl.edu	37	19	18120412	18120412	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18120412	18120412	G	C	SNP	ARRDC2	NM_015683	human	genbank	57_37b	+1	validated	silent	c.501	p.A167	0.233	superfamily_E set domains	superfamily_E set domains,HMMPfam_Arrestin_N,HMMPfam_Arrestin_C	-	no_errors
ASNSD1	54529	genome.wustl.edu	37	2	190531576	190531576	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190531576	190531576	C	T	SNP	ASNSD1	NM_019048	human	genbank	57_37b	+1	validated	missense	c.718	p.P240S	1.000	NULL	superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases),superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_Asn_synthase	-	no_errors
ASTN1	460	genome.wustl.edu	37	1	176992609	176992609	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	176992609	176992609	G	T	SNP	ASTN1	NM_004319	human	genbank	57_37b	-1	validated	missense	c.1369	p.P457T	1.000	NULL	HMMSmart_EGF,HMMSmart_MACPF,superfamily_FN_III-like,HMMSmart_FN3	-	no_errors
BNC2	54796	genome.wustl.edu	37	9	16738360	16738360	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	16738360	16738360	C	A	SNP	BNC2	NM_017637	human	genbank	57_37b	-1	validated	nonsense	c.127	p.E43*	0.496	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
BRD9	65980	genome.wustl.edu	37	5	870649	870649	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	870649	870649	C	T	SNP	BRD9	NM_023924	human	genbank	57_37b	-1	validated	silent	c.1176	p.E392	0.722	NULL	superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain	-	no_errors
CADM4	199731	genome.wustl.edu	37	19	44130299	44130299	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44130299	44130299	G	A	SNP	CADM4	NM_145296	human	genbank	57_37b	-1	validated	missense	c.641	p.T214M	1.000	superfamily_SSF48726,HMMSmart_IG	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_C2-set_2,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_4.1m	-	no_errors
CASZ1	54897	genome.wustl.edu	37	1	10707928	10707928	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	10707928	10707928	G	A	SNP	CASZ1	NM_001079843	human	genbank	57_37b	-1	validated	missense	c.3427	p.P1143S	0.999	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
CCS	9973	genome.wustl.edu	37	11	66367007	66367007	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66367007	66367007	C	G	SNP	CCS	NM_005125	human	genbank	57_37b	+1	reviewed	missense	c.328	p.P110A	0.920	HMMPfam_Sod_Cu,superfamily_SOD_Cu_Zn	PatternScan_HMA_1,PatternScan_SOD_CU_ZN_1,superfamily_HeavyMe_transpt,HMMPfam_HMA,HMMPfam_Sod_Cu,superfamily_SOD_Cu_Zn,PatternScan_SOD_CU_ZN_2	-	no_errors
CEL	1056	genome.wustl.edu	37	9	135946377	135946377	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135946377	135946377	C	A	SNP	CEL	NM_001807	human	genbank	57_37b	+1	reviewed	missense	c.1497	p.D499E	1.000	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases,PatternScan_CARBOXYLESTERASE_B_2,PatternScan_CARBOXYLESTERASE_B_1	-	no_errors
CEP76	79959	genome.wustl.edu	37	18	12678227	12678227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12678227	12678227	G	A	SNP	CEP76	NM_024899	human	genbank	57_37b	-1	provisional	missense	c.1504	p.P502S	1.000	NULL	PatternScan_WD_REPEATS_1	-	no_errors
CKAP5	9793	genome.wustl.edu	37	11	46811734	46811734	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	46811734	46811734	T	C	SNP	CKAP5	NM_001008938	human	genbank	57_37b	-1	validated	missense	c.1767	p.I589M	0.922	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
COL15A1	1306	genome.wustl.edu	37	9	101796852	101796852	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	101796852	101796852	T	G	SNP	COL15A1	NM_001855	human	genbank	57_37b	+1	reviewed	missense	c.2065	p.S689A	0.966	HMMPfam_Collagen	superfamily_ConA_like_lec_gl,HMMSmart_TSPN,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_Endostatin	-	no_errors
COL16A1	1307	genome.wustl.edu	37	1	32157643	32157644	+	In_Frame_Ins	INS	-	-	CGT	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	32157643	32157644	-	CGT	INS	COL16A1	NM_001856	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.1220_1219	p.407in_frame_insD	0.820:0.786	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen	-	no_errors
COL18A1	80781	genome.wustl.edu	37	21	46888327	46888327	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46888327	46888327	C	A	SNP	COL18A1	NM_130444	human	genbank	57_37b	+1	reviewed	nonsense	c.1523	p.S508*	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210	HMMPfam_DUF959,HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_C-type lectin-like,HMMPfam_Endostatin	-	no_errors
COL2A1	1280	genome.wustl.edu	37	12	48368057	48368061	+	Frame_Shift_Del	DEL	GGAAG	GGAAG	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	GGAAG	GGAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	48368057	48368061	GGAAG	-	DEL	COL2A1	NM_001844	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.4132_4128	p.F1377fs	1.000:1.000:1.000:1.000:1.000	HMMSmart_SM00038,HMMPfam_COLFI	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	(deletion:cds_exon[48367872,48368114])	no_errors
CRB3	92359	genome.wustl.edu	37	19	6465589	6465589	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6465589	6465589	T	C	SNP	CRB3	NM_174881	human	genbank	57_37b	+1	reviewed	missense	c.116	p.V39A	0.000	NULL	NULL	-	no_errors
DARS	1615	genome.wustl.edu	37	2	136678156	136678156	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	136678156	136678156	C	A	SNP	DARS	NM_001349	human	genbank	57_37b	-1	validated	missense	c.826	p.D276Y	1.000	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	superfamily_Nucleic acid-binding proteins,HMMPfam_tRNA_anti,HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	-	no_errors
DHX57	90957	genome.wustl.edu	37	2	39046255	39046255	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	39046255	39046255	T	A	SNP	DHX57	NM_198963	human	genbank	57_37b	-1	provisional	missense	c.3323	p.N1108I	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_HA2	HMMPfam_UBA,HMMPfam_RWD,HMMPfam_zf-CCCH,HMMSmart_SM00356,HMMSmart_SM00487,HMMPfam_DEAD,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
DISP2	85455	genome.wustl.edu	37	15	40661498	40661498	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40661498	40661498	C	T	SNP	DISP2	NM_033510	human	genbank	57_37b	+1	reviewed	missense	c.3185	p.A1062V	1.000	superfamily_SSF82866	superfamily_SSF82866	-	no_errors
DNAH1	25981	genome.wustl.edu	37	3	52382948	52382948	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52382948	52382948	G	C	SNP	DNAH1	NM_015512	human	genbank	57_37b	+1	validated	missense	c.2151	p.E717D	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DNAH2	146754	genome.wustl.edu	37	17	7663178	7663178	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7663178	7663178	A	T	SNP	DNAH2	NM_020877	human	genbank	57_37b	+1	validated	missense	c.2707	p.T903S	1.000	superfamily_Spectrin repeat	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DNAH6	0	genome.wustl.edu	37	2	84897461	84897461	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	84897461	84897461	G	T	SNP	DNAH6	NM_001370	human	genbank	57_37b	+1	validated	missense	c.6316	p.A2106S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DST	667	genome.wustl.edu	37	6	56458895	56458895	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56458895	56458895	G	T	SNP	DST	NM_001144769	human	genbank	57_37b	-1	reviewed	missense	c.5935	p.P1979T	0.122	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_Spectrin repeat	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_GAS2,HMMSmart_SM00243	-	no_errors
EDNRB	1910	genome.wustl.edu	37	13	78492256	78492256	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	78492256	78492256	G	A	SNP	EDNRB	NM_000115	human	genbank	57_37b	-1	reviewed	silent	c.453	p.I151	0.875	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
EIF1AX	1964	genome.wustl.edu	37	X	20148683	20148683	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	20148683	20148683	T	G	SNP	EIF1AX	NM_001412	human	genbank	57_37b	-1	reviewed	missense	c.380	p.D127A	1.000	superfamily_Nucleic acid-binding proteins	superfamily_Nucleic acid-binding proteins,HMMSmart_SM00652,HMMPfam_eIF-1a,PatternScan_IF1A	-	no_errors
ELOVL6	79071	genome.wustl.edu	37	4	110972768	110972768	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	110972768	110972768	G	T	SNP	ELOVL6	NM_001130721	human	genbank	57_37b	-1	validated	missense	c.524	p.A175D	1.000	HMMPfam_ELO	HMMPfam_ELO,PatternScan_ELO	-	no_errors
ENO3	2027	genome.wustl.edu	37	17	4856110	4856110	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4856110	4856110	C	G	SNP	ENO3	NM_001976	human	genbank	57_37b	+1	reviewed	missense	c.106	p.P36A	1.000	HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like	HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like,superfamily_Enolase C-terminal domain-like,HMMPfam_Enolase_C,PatternScan_ENOLASE	-	no_errors
ENPP5	59084	genome.wustl.edu	37	6	46129132	46129132	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	46129132	46129132	T	G	SNP	ENPP5	NM_021572	human	genbank	57_37b	-1	validated	missense	c.1365	p.L455F	1.000	NULL	superfamily_Alkaline phosphatase-like,HMMPfam_Phosphodiest	-	no_errors
ENSG00000201741	0	genome.wustl.edu	37	17	17363784	17363784	+	RNA	SNP	A	A	C	rs1242509	byCluster;byFrequency;by1000genomes	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	17363784	17363784	A	C	SNP	ENSG00000201741	ENST00000364871	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.044	-	-	-	
ENSG00000223709	0	genome.wustl.edu	37	11	89791245	89791245	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89791245	89791245	G	A	SNP	ENSG00000223709	ENST00000436580	human	ensembl	57_37b	-1	known	missense	c.872	p.T291M	0.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
ENSG00000246060	0	genome.wustl.edu	37	13	45976378	45976378	+	RNA	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	45976378	45976378	A	G	SNP	ENSG00000246060	ENST00000501822	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors
ENSG00000246267	0	genome.wustl.edu	37	2	18736320	18736321	+	RNA	DEL	CC	CC	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	CC	CC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	18736320	18736321	CC	-	DEL	ENSG00000246267	ENST00000501278	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000:0.002	-	-	(deletion:rna[18735991,18737915])	no_errors
ENSG00000246325	0	genome.wustl.edu	37	1	150601978	150601978	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150601978	150601978	C	A	SNP	ENSG00000246325	ENST00000499337	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.995	-	-	-	no_errors
EPHB2	2048	genome.wustl.edu	37	1	23191470	23191470	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23191470	23191470	C	T	SNP	EPHB2	NM_004442	human	genbank	57_37b	+1	reviewed	silent	c.1068	p.L356	0.907	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	superfamily_Gal_bind_like,HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_1	-	no_errors
EPPK1	83481	genome.wustl.edu	37	8	144940540	144940540	+	Silent	SNP	G	G	A	rs56034452	byCluster	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	144940540	144940540	G	A	SNP	EPPK1	NM_031308	human	genbank	57_37b	-1	validated	silent	c.6882	p.G2294	0.998	superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	HMMSmart_SM00250,superfamily_Plakin repeat,HMMPfam_Plectin	-	
ERBB4	2066	genome.wustl.edu	37	2	212989493	212989493	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	212989493	212989493	T	A	SNP	ERBB4	NM_005235	human	genbank	57_37b	-1	reviewed	missense	c.218	p.D73V	1.000	superfamily_L domain-like,HMMPfam_Recep_L_domain	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMSmart_SM00261,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_YLP	-	no_errors
ESR2	2100	genome.wustl.edu	37	14	64746760	64746760	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64746760	64746760	T	G	SNP	ESR2	NM_001437	human	genbank	57_37b	-1	reviewed	silent	c.474	p.G158	0.985	HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1	HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
ETS2	2114	genome.wustl.edu	37	21	40186899	40186899	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	40186899	40186899	A	T	SNP	ETS2	NM_005239	human	genbank	57_37b	+1	validated	missense	c.499	p.I167F	1.000	superfamily_SAM_homology,HMMPfam_SAM_PNT,HMMSmart_SAM_PNT	superfamily_SAM_homology,HMMPfam_SAM_PNT,HMMSmart_SAM_PNT,superfamily_SSF46785,HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2	-	no_errors
FABP4	2167	genome.wustl.edu	37	8	82395335	82395346	+	In_Frame_Del	DEL	TCTTTCATATAA	TCTTTCATATAA	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	TCTTTCATATAA	TCTTTCATATAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	82395335	82395346	TCTTTCATATAA	-	DEL	FABP4	NM_001442	human	genbank	57_37b	-1	reviewed	in_frame_del	c.68_57	p.DYMK19in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.531	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	(deletion:cds_exon[82395330,82395402])	no_errors
FAM115A	9747	genome.wustl.edu	37	7	143573579	143573579	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143573579	143573579	C	A	SNP	FAM115A	NM_014719	human	genbank	57_37b	-1	predicted	silent	c.123	p.V41	1.000	NULL	NULL	-	no_errors
FAM149B1	317662	genome.wustl.edu	37	10	74953317	74953317	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	74953317	74953317	G	A	SNP	FAM149B1	NM_173348	human	genbank	57_37b	+1	validated	missense	c.508	p.E170K	0.919	NULL	NULL	-	no_errors
FAM49B	51571	genome.wustl.edu	37	8	130861491	130861491	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	130861491	130861491	C	G	SNP	FAM49B	NM_016623	human	genbank	57_37b	-1	predicted	missense	c.838	p.D280H	1.000	HMMPfam_DUF1394	HMMPfam_DUF1394	-	no_errors
FAM71B	153745	genome.wustl.edu	37	5	156590407	156590407	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156590407	156590407	C	G	SNP	FAM71B	NM_130899	human	genbank	57_37b	-1	validated	missense	c.869	p.S290T	0.001	NULL	NULL	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92592379	92592379	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	92592379	92592379	T	A	SNP	FAT3	NM_001008781	human	genbank	57_37b	+1	validated	missense	c.11549	p.L3850H	1.000	superfamily_Concanavalin A-like lectins/glucanases	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
FLNC	2318	genome.wustl.edu	37	7	128491632	128491632	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128491632	128491632	G	A	SNP	FLNC	NM_001458	human	genbank	57_37b	+1	reviewed	missense	c.5792	p.R1931H	1.000	HMMPfam_Filamin,superfamily_E set domains,HMMSmart_SM00557	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_E set domains,HMMPfam_Filamin,HMMSmart_SM00557	-	no_errors
FMNL1	752	genome.wustl.edu	37	17	43314958	43314958	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	43314958	43314958	G	A	SNP	FMNL1	NM_005892	human	genbank	57_37b	+1	reviewed	silent	c.846	p.V282	1.000	HMMPfam_Drf_GBD	HMMPfam_Drf_GBD,HMMPfam_Drf_FH3,superfamily_Formin homology 2 domain (FH2 domain),HMMSmart_SM00498,HMMPfam_FH2	-	no_errors
FMO1	2326	genome.wustl.edu	37	1	171251162	171251162	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	171251162	171251162	C	T	SNP	FMO1	NM_002021	human	genbank	57_37b	+1	reviewed	silent	c.873	p.R291	0.127	HMMPfam_FMO-like,superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FMO-like,PatternScan_LIPOCALIN,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
FRMD6	122786	genome.wustl.edu	37	14	52171538	52171538	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	52171538	52171538	G	T	SNP	FRMD6	NM_001042481	human	genbank	57_37b	+1	validated	missense	c.419	p.R140L	0.997	HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,superfamily_FERM_3-hlx,HMMPfam_FERM_M,superfamily_SSF50729,HMMPfam_FERM_C	-	no_errors
FRMD7	90167	genome.wustl.edu	37	X	131212279	131212279	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	131212279	131212279	C	A	SNP	FRMD7	NM_194277	human	genbank	57_37b	-1	reviewed	missense	c.1766	p.R589M	1.000	NULL	PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,superfamily_SSF50729,HMMPfam_FERM_C,HMMPfam_FA	-	no_errors
FST	10468	genome.wustl.edu	37	5	52779526	52779526	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	52779526	52779526	A	G	SNP	FST	NM_013409	human	genbank	57_37b	+1	reviewed	missense	c.470	p.E157G	1.000	superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1	HMMPfam_PRKCSH,HMMSmart_SM00274,HMMPfam_FOLN,superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1	-	no_errors
FSTL4	23105	genome.wustl.edu	37	5	132535227	132535227	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	132535227	132535227	C	T	SNP	FSTL4	NM_015082	human	genbank	57_37b	-1	validated	missense	c.2089	p.D697N	0.996	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1,superfamily_EF-hand,PatternScan_EF_HAND_1,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	-	no_errors
FYCO1	79443	genome.wustl.edu	37	3	46021263	46021263	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46021263	46021263	G	T	SNP	FYCO1	NM_024513	human	genbank	57_37b	-1	validated	missense	c.222	p.F74L	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-binding arm,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger,superfamily_Supernatant protein factor (SPF) C-terminal domain	-	no_errors
GAL3ST2	64090	genome.wustl.edu	37	2	242742878	242742878	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	242742878	242742878	C	G	SNP	GAL3ST2	NM_022134	human	genbank	57_37b	+1	reviewed	missense	c.494	p.P165R	0.000	HMMPfam_Gal-3-0_sulfotr	HMMPfam_Gal-3-0_sulfotr	-	no_errors
GIMAP7	168537	genome.wustl.edu	37	7	150217141	150217141	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150217141	150217141	A	G	SNP	GIMAP7	NM_153236	human	genbank	57_37b	+1	reviewed	missense	c.79	p.T27A	1.000	superfamily_SSF52540,HMMPfam_AIG1	superfamily_SSF52540,HMMPfam_AIG1	-	no_errors
GPATCH1	55094	genome.wustl.edu	37	19	33585132	33585132	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	33585132	33585132	A	G	SNP	GPATCH1	NM_018025	human	genbank	57_37b	+1	provisional	silent	c.510	p.G170	1.000	HMMSmart_G_patch,HMMPfam_G-patch	HMMPfam_DUF1604,HMMSmart_G_patch,HMMPfam_G-patch	-	no_errors
HDAC5	10014	genome.wustl.edu	37	17	42170479	42170479	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42170479	42170479	G	A	SNP	HDAC5	NM_001015053	human	genbank	57_37b	-1	reviewed	missense	c.625	p.P209S	1.000	NULL	superfamily_Arginase/deacetylase,HMMPfam_Hist_deacetyl	-	no_errors
HDGFRP2	0	genome.wustl.edu	37	19	4496327	4496327	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4496327	4496327	C	A	SNP	HDGFRP2	NM_001001520	human	genbank	57_37b	+1	reviewed	missense	c.1253	p.S418Y	0.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293	-	no_errors
HERC4	26091	genome.wustl.edu	37	10	69832857	69832857	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	69832857	69832857	G	T	SNP	HERC4	NM_022079	human	genbank	57_37b	-1	validated	nonsense	c.9	p.C3*	1.000	superfamily_RCC1/BLIP-II	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
HKR1	284459	genome.wustl.edu	37	19	37853955	37853955	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37853955	37853955	C	T	SNP	HKR1	NM_181786	human	genbank	57_37b	+1	provisional	nonsense	c.1258	p.Q420*	0.975	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
HOXB2	3212	genome.wustl.edu	37	17	46622173	46622173	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	46622173	46622173	G	A	SNP	HOXB2	NM_002145	human	genbank	57_37b	-1	reviewed	missense	c.101	p.T34I	1.000	NULL	PatternScan_ANTENNAPEDIA,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
HPS5	11234	genome.wustl.edu	37	11	18313238	18313238	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	18313238	18313238	T	C	SNP	HPS5	NM_181507	human	genbank	57_37b	-1	reviewed	missense	c.2191	p.S731G	0.000	NULL	superfamily_WD40 repeat-like	-	no_errors
HUNK	30811	genome.wustl.edu	37	21	33355870	33355870	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	33355870	33355870	A	G	SNP	HUNK	NM_014586	human	genbank	57_37b	+1	validated	missense	c.1205	p.K402R	1.000	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
IFIT1L	439996	genome.wustl.edu	37	10	91143779	91143779	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	91143779	91143779	G	T	SNP	IFIT1L	NM_001010987	human	genbank	57_37b	+1	provisional	nonsense	c.709	p.E237*	0.988	superfamily_TPR-like	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
IGSF10	285313	genome.wustl.edu	37	3	151165107	151165107	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	151165107	151165107	G	C	SNP	IGSF10	NM_178822	human	genbank	57_37b	-1	provisional	missense	c.2662	p.Q888E	0.003	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_I-set,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_ig	-	no_errors
IL28RA	163702	genome.wustl.edu	37	1	24496055	24496055	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	24496055	24496055	C	T	SNP	IL28RA	NM_170743	human	genbank	57_37b	-1	reviewed	silent	c.219	p.E73	0.000	superfamily_Fibronectin type III	superfamily_Fibronectin type III	-	no_errors
IQGAP2	10788	genome.wustl.edu	37	5	75993880	75993880	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	75993880	75993880	G	C	SNP	IQGAP2	NM_006633	human	genbank	57_37b	+1	validated	silent	c.4275	p.L1425	1.000	HMMPfam_RasGAP_C	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,PatternScan_WW_DOMAIN_1,HMMSmart_SM00015,HMMPfam_IQ,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_GTPase activation domain GAP,HMMSmart_SM00323,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,HMMPfam_RasGAP_C	-	no_errors
ITPKB	3707	genome.wustl.edu	37	1	226825421	226825421	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	226825421	226825421	G	A	SNP	ITPKB	NM_002221	human	genbank	57_37b	-1	reviewed	nonsense	c.2584	p.R862*	0.991	HMMPfam_IPK,superfamily_SAICAR synthase-like	HMMPfam_IPK,superfamily_SAICAR synthase-like	-	no_errors
LCE2D	353141	genome.wustl.edu	37	1	152636666	152636666	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152636666	152636666	C	T	SNP	LCE2D	NM_178430	human	genbank	57_37b	+1	validated	missense	c.85	p.P29S	0.080	NULL	NULL	-	no_errors
LGR5	8549	genome.wustl.edu	37	12	71978445	71978445	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	71978445	71978445	G	C	SNP	LGR5	NM_003667	human	genbank	57_37b	+1	provisional	silent	c.2655	p.V885	0.000	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_RNI-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00364,HMMSmart_SM00365,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
LOC100288406	0	genome.wustl.edu	37	12	92498	92498	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	92498	92498	C	G	SNP	LOC100288406	XM_002343141	human	genbank	57_37b	+1	model	silent	c.522	p.P174	0.000	NULL	NULL	-	no_errors
LOC100288997	0	genome.wustl.edu	37	15	91493657	91493657	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91493657	91493657	T	G	SNP	LOC100288997	XM_002343396	human	genbank	57_37b	-1	model	missense	c.371	p.K124T	0.000	NULL	NULL	-	no_errors
LOC286528	286528	genome.wustl.edu	37	X	113625316	113625316	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	113625316	113625316	A	G	SNP	LOC286528	XM_210501	human	genbank	57_37b	+1	model	missense	c.190	p.M64V	1.000	HMMPfam_Ssu72	HMMPfam_Ssu72	-	no_errors
LOC400986	400986	genome.wustl.edu	37	2	96546190	96546190	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96546190	96546190	G	C	SNP	LOC400986	XM_001717763	human	genbank	57_37b	-1	model	missense	c.2407	p.Q803E	0.027	NULL	NULL	-	no_errors
LOC440419	440419	genome.wustl.edu	37	17	25756890	25756890	+	RNA	SNP	G	A	A	rs4795660	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	25756890	25756890	G	A	SNP	LOC440419	XR_040504	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.153	-	-	-	
LPCAT3	10162	genome.wustl.edu	37	12	7087665	7087665	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	7087665	7087665	C	T	SNP	LPCAT3	NM_005768	human	genbank	57_37b	-1	validated	missense	c.878	p.G293E	1.000	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
MAP3K12	7786	genome.wustl.edu	37	12	53876961	53876963	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53876961	53876963	GAG	-	DEL	MAP3K12	NM_006301	human	genbank	57_37b	-1	reviewed	in_frame_del	c.1527_1525	p.L509in_frame_del	1.000:1.000:1.000	NULL	PatternScan_PROTEIN_KINASE_ATP,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	(deletion:cds_exon[53876349,53876973])	no_errors
MCC	4163	genome.wustl.edu	37	5	112458465	112458465	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	112458465	112458465	T	A	SNP	MCC	NM_001085377	human	genbank	57_37b	-1	reviewed	missense	c.943	p.N315Y	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_MCC-bdg_PDZ	-	no_errors
MCM3AP	8888	genome.wustl.edu	37	21	47663506	47663506	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	47663506	47663506	G	A	SNP	MCM3AP	NM_003906	human	genbank	57_37b	-1	reviewed	silent	c.5169	p.S1723	0.004	NULL	superfamily_SSF54928,HMMPfam_SAC3_GANP	-	no_errors
MCOLN1	57192	genome.wustl.edu	37	19	7593049	7593049	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7593049	7593049	G	A	SNP	MCOLN1	NM_020533	human	genbank	57_37b	+1	reviewed	silent	c.783	p.T261	0.297	NULL	HMMPfam_Ion_trans	-	no_errors
MDS1	4197	genome.wustl.edu	37	3	168833701	168833701	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	168833701	168833701	C	T	SNP	MDS1	ENST00000494292	human	ensembl	57_37b	-1	known	silent	c.1959	p.A653	0.998	NULL	HMMSmart_SM00317,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
MED12L	116931	genome.wustl.edu	37	3	151107820	151107820	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	151107820	151107820	C	G	SNP	MED12L	NM_053002	human	genbank	57_37b	+1	validated	silent	c.5400	p.S1800	1.000	NULL	HMMPfam_Med12	-	no_errors
MSI2	124540	genome.wustl.edu	37	17	55674274	55674274	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	55674274	55674274	T	C	SNP	MSI2	NM_138962	human	genbank	57_37b	+1	reviewed	missense	c.500	p.V167A	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
MUC5B	727897	genome.wustl.edu	37	11	1263459	1263464	+	In_Frame_Del	DEL	CTGTCA	CTGTCA	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	CTGTCA	CTGTCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1263459	1263464	CTGTCA	-	DEL	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	in_frame_del	c.5358_5363	p.CQ1787in_frame_del	0.559:0.571:0.530:0.012:0.004:0.002	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	(deletion:cds_exon[1262081,1272973])	no_errors
MX2	4600	genome.wustl.edu	37	21	42748967	42748967	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	42748967	42748967	T	G	SNP	MX2	NM_002463	human	genbank	57_37b	+1	reviewed	missense	c.134	p.F45C	0.000	NULL	HMMSmart_DYNc,superfamily_SSF52540,HMMPfam_Dynamin_N,PatternScan_DYNAMIN,HMMPfam_Dynamin_M,HMMPfam_GED,HMMSmart_GED	-	no_errors
MYO18B	84700	genome.wustl.edu	37	22	26422632	26422632	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	26422632	26422632	G	A	SNP	MYO18B	NM_032608	human	genbank	57_37b	+1	reviewed	missense	c.6692	p.R2231Q	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-	no_errors
MYO5C	55930	genome.wustl.edu	37	15	52553129	52553129	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	52553129	52553129	C	A	SNP	MYO5C	NM_018728	human	genbank	57_37b	-1	validated	nonsense	c.1243	p.E415*	1.000	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head	superfamily_Myosin S1 fragment N-terminal domain,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors
NAP1L2	4674	genome.wustl.edu	37	X	72434297	72434297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	72434297	72434297	G	A	SNP	NAP1L2	NM_021963	human	genbank	57_37b	-1	reviewed	missense	c.32	p.S11L	0.199	NULL	HMMPfam_NAP	-	no_errors
NBEAL2	23218	genome.wustl.edu	37	3	47033996	47033996	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47033996	47033996	G	C	SNP	NBEAL2	NM_015175	human	genbank	57_37b	+1	validated	missense	c.1064	p.G355A	1.000	NULL	superfamily_ARM repeat,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
NHSL2	340527	genome.wustl.edu	37	X	71358701	71358701	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	71358701	71358701	C	A	SNP	NHSL2	NM_001013627	human	genbank	57_37b	+1	provisional	missense	c.205	p.P69T	0.561	NULL	NULL	-	no_errors
OAS1	4938	genome.wustl.edu	37	12	113346375	113346375	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113346375	113346375	G	C	SNP	OAS1	NM_001032409	human	genbank	57_37b	+1	reviewed	missense	c.215	p.G72A	0.147	superfamily_Nucleotidyltransferase,PatternScan_25A_SYNTH_1	superfamily_Nucleotidyltransferase,PatternScan_25A_SYNTH_1,HMMPfam_OAS1_C,superfamily_PAP/OAS1 substrate-binding domain,PatternScan_25A_SYNTH_2	-	no_errors
ODZ1	10178	genome.wustl.edu	37	X	123695609	123695609	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	123695609	123695609	C	T	SNP	ODZ1	NM_014253	human	genbank	57_37b	-1	reviewed	nonsense	c.2346	p.W782*	1.000	superfamily_SSF57196,HMMSmart_EGF	HMMPfam_Ten_N,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_SSF57196,superfamily_SSF101898,HMMPfam_NHL,superfamily_N2O_reductase_N,HMMPfam_RHS_repeat	-	no_errors
OR12D3	81797	genome.wustl.edu	37	6	29342775	29342775	+	Missense_Mutation	SNP	G	A	A	rs114071887	byCluster;by1000genomes	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29342775	29342775	G	A	SNP	OR12D3	NM_030959	human	genbank	57_37b	-1	provisional	missense	c.290	p.T97I	0.005	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	
OR4D10	390197	genome.wustl.edu	37	11	59245434	59245434	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59245434	59245434	T	C	SNP	OR4D10	NM_001004705	human	genbank	57_37b	+1	provisional	missense	c.532	p.Y178H	0.995	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR5M10	390167	genome.wustl.edu	37	11	56344871	56344871	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	56344871	56344871	G	T	SNP	OR5M10	NM_001004741	human	genbank	57_37b	-1	provisional	silent	c.327	p.I109	0.001	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PAGE1	8712	genome.wustl.edu	37	X	49459343	49459343	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49459343	49459343	G	A	SNP	PAGE1	NM_003785	human	genbank	57_37b	-1	reviewed	missense	c.31	p.R11C	0.000	HMMPfam_GAGE	HMMPfam_GAGE	-	no_errors
PARP10	84875	genome.wustl.edu	37	8	145058963	145058976	+	Frame_Shift_Del	DEL	TTTCCACCAGGCCC	TTTCCACCAGGCCC	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	TTTCCACCAGGCCC	TTTCCACCAGGCCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145058963	145058976	TTTCCACCAGGCCC	-	DEL	PARP10	NM_032789	human	genbank	57_37b	-1	validated	frame_shift_del	c.1207_1194	p.E398fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001:0.000:0.000:0.001:0.000	NULL	HMMSmart_UIM,superfamily_SSF56399,HMMPfam_PARP	(deletion:cds_exon[145058712,145059496])	no_errors
PCBP4	57060	genome.wustl.edu	37	3	51993381	51993381	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51993381	51993381	A	T	SNP	PCBP4	NM_020418	human	genbank	57_37b	-1	reviewed	splice_site	c.699+2	e4+2	1.000	-	-	-	no_errors
PKHD1L1	93035	genome.wustl.edu	37	8	110457322	110457322	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110457322	110457322	T	C	SNP	PKHD1L1	NM_177531	human	genbank	57_37b	+1	validated	missense	c.5224	p.S1742P	0.657	HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00758,superfamily_Anthrax protective antigen,HMMSmart_SM00710,superfamily_Cupredoxins,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors
PNPLA3	80339	genome.wustl.edu	37	22	44328855	44328855	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	44328855	44328855	C	T	SNP	PNPLA3	NM_025225	human	genbank	57_37b	+1	reviewed	missense	c.584	p.P195L	1.000	NULL	superfamily_FabD/lysophospholipase-like,HMMPfam_Patatin	-	no_errors
POLA1	5422	genome.wustl.edu	37	X	24745162	24745162	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	24745162	24745162	C	A	SNP	POLA1	NM_016937	human	genbank	57_37b	+1	validated	missense	c.1487	p.P496H	1.000	superfamily_RNaseH_fold,HMMPfam_DNA_pol_B_exo	superfamily_RNaseH_fold,HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_SSF56672,HMMPfam_DNA_pol_B,PatternScan_DNA_POLYMERASE_B,HMMPfam_zf-DNA_Pol,superfamily_SSF90234	-	no_errors
PPP3CB	5532	genome.wustl.edu	37	10	75230840	75230840	+	Missense_Mutation	SNP	G	G	A	rs1141282	byCluster	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75230840	75230840	G	A	SNP	PPP3CB	NM_001142353	human	genbank	57_37b	-1	validated	missense	c.797	p.S266F	1.000	superfamily_SSF56300,HMMSmart_PP2Ac,HMMPfam_Metallophos	superfamily_SSF56300,HMMSmart_PP2Ac,HMMPfam_Metallophos,PatternScan_SER_THR_PHOSPHATASE	-	
PRDM1	639	genome.wustl.edu	37	6	106553637	106553637	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106553637	106553637	C	A	SNP	PRDM1	NM_001198	human	genbank	57_37b	+1	reviewed	silent	c.1602	p.T534	1.000	NULL	HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199,PatternScan_AA_TRNA_LIGASE_I,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PREX1	57580	genome.wustl.edu	37	20	47251259	47251259	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47251259	47251259	T	A	SNP	PREX1	NM_020820	human	genbank	57_37b	-1	reviewed	missense	c.4222	p.N1408Y	1.000	NULL	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors
PREX2	80243	genome.wustl.edu	37	8	68982088	68982088	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	68982088	68982088	C	T	SNP	PREX2	NM_024870	human	genbank	57_37b	+1	validated	missense	c.1462	p.R488C	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors
PSKH1	5681	genome.wustl.edu	37	16	67942933	67942933	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67942933	67942933	T	A	SNP	PSKH1	NM_006742	human	genbank	57_37b	+1	validated	missense	c.281	p.V94D	1.000	superfamily_Kinase_like	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
PZP	5858	genome.wustl.edu	37	12	9321484	9321484	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	9321484	9321484	T	A	SNP	PZP	NM_002864	human	genbank	57_37b	-1	validated	silent	c.2088	p.V696	0.000	NULL	PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors
RAPGEF6	51735	genome.wustl.edu	37	5	130778206	130778206	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	130778206	130778206	C	A	SNP	RAPGEF6	NM_016340	human	genbank	57_37b	-1	validated	missense	c.3446	p.R1149I	1.000	superfamily_Ras GEF	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_RA,HMMSmart_SM00314,HMMSmart_SM00147,HMMPfam_RasGEF	-	no_errors
RBM4B	83759	genome.wustl.edu	37	11	66444335	66444335	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66444335	66444335	A	T	SNP	RBM4B	NM_031492	human	genbank	57_37b	-1	provisional	missense	c.216	p.N72K	1.000	superfamily_RNA-binding domain RBD	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1,HMMPfam_zf-CCHC,HMMSmart_SM00343	-	no_errors
RETSAT	54884	genome.wustl.edu	37	2	85570864	85570864	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	85570864	85570864	G	A	SNP	RETSAT	NM_017750	human	genbank	57_37b	-1	validated	nonsense	c.1591	p.R531*	0.011	superfamily_FAD/NAD(P)-binding domain	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FAD_binding_2,PatternScan_RCC1_2	-	no_errors
RIC8A	60626	genome.wustl.edu	37	11	209698	209698	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	209698	209698	G	T	SNP	RIC8A	NM_021932	human	genbank	57_37b	+1	provisional	missense	c.424	p.V142L	1.000	HMMPfam_Ric8	HMMPfam_Ric8	-	no_errors
RPL18	6141	genome.wustl.edu	37	19	49119404	49119404	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49119404	49119404	C	A	SNP	RPL18	NM_000979	human	genbank	57_37b	-1	reviewed	missense	c.353	p.G118V	1.000	HMMPfam_Ribosomal_L18e,superfamily_Ribosomal proteins L15p and L18e	HMMPfam_Ribosomal_L18e,superfamily_Ribosomal proteins L15p and L18e,PatternScan_RIBOSOMAL_L18E	-	no_errors
RUFY3	22902	genome.wustl.edu	37	4	71654523	71654524	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71654523	71654524	-	A	INS	RUFY3	NM_001037442	human	genbank	57_37b	+1	validated	frame_shift_ins	c.1072_1073	p.D358fs	1.000:1.000	NULL	HMMPfam_RUN,HMMSmart_SM00593,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	-	no_errors
SAGE1	55511	genome.wustl.edu	37	X	134995008	134995008	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134995008	134995008	A	G	SNP	SAGE1	NM_018666	human	genbank	57_37b	+1	reviewed	missense	c.2667	p.I889M	0.006	NULL	NULL	-	no_errors
SCAP	22937	genome.wustl.edu	37	3	47463968	47463968	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47463968	47463968	G	A	SNP	SCAP	ENST00000320017	human	ensembl	57_37b	-1	known	missense	c.424	p.P142S	1.000	NULL	NULL	-	no_errors
SCN1A	6323	genome.wustl.edu	37	2	166850747	166850747	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	166850747	166850747	C	G	SNP	SCN1A	NM_006920	human	genbank	57_37b	-1	reviewed	missense	c.4728	p.E1576D	0.997	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ,PatternScan_RIBONUCLEASE_P	-	no_errors
SH3PXD2B	285590	genome.wustl.edu	37	5	171765983	171765983	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	171765983	171765983	G	A	SNP	SH3PXD2B	NM_001017995	human	genbank	57_37b	-1	validated	missense	c.2126	p.A709V	0.709	NULL	superfamily_PX,HMMPfam_PX,HMMSmart_PX,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
SLC5A11	115584	genome.wustl.edu	37	16	24919344	24919344	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24919344	24919344	C	A	SNP	SLC5A11	NM_052944	human	genbank	57_37b	+1	provisional	missense	c.1326	p.S442R	1.000	HMMPfam_SSF	HMMPfam_SSF	-	no_errors
SPDYE4	388333	genome.wustl.edu	37	17	8660710	8660710	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8660710	8660710	C	G	SNP	SPDYE4	NM_001128076	human	genbank	57_37b	-1	provisional	missense	c.210	p.E70D	0.001	NULL	NULL	-	no_errors
SPG20	23111	genome.wustl.edu	37	13	36886599	36886599	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	36886599	36886599	G	C	SNP	SPG20	NM_001142294	human	genbank	57_37b	-1	reviewed	missense	c.1499	p.T500S	0.909	NULL	HMMSmart_MIT,HMMPfam_MIT	-	no_errors
STK11IP	114790	genome.wustl.edu	37	2	220479214	220479214	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220479214	220479214	G	T	SNP	STK11IP	ENST00000456909	human	ensembl	57_37b	+1	known	missense	c.2815	p.D939Y	0.002	NULL	superfamily_Outer arm dynein light chain 1,HMMPfam_LRR_1	-	no_errors
SYNC	81493	genome.wustl.edu	37	1	33160900	33160900	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	33160900	33160900	C	G	SNP	SYNC	NM_030786	human	genbank	57_37b	-1	reviewed	missense	c.799	p.V267L	0.993	NULL	NULL	-	no_errors
TARS2	80222	genome.wustl.edu	37	1	150469292	150469292	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150469292	150469292	G	A	SNP	TARS2	NM_025150	human	genbank	57_37b	+1	provisional	missense	c.928	p.E310K	1.000	superfamily_SSF55681	HMMPfam_TGS,superfamily_TGS-like,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD,superfamily_SSF55681,HMMPfam_tRNA-synt_2b,superfamily_Anticodon_bd,HMMPfam_HGTP_anticodon	-	no_errors
TAS1R3	83756	genome.wustl.edu	37	1	1268387	1268387	+	Nonsense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1268387	1268387	C	G	SNP	TAS1R3	NM_152228	human	genbank	57_37b	+1	provisional	nonsense	c.1362	p.Y454*	0.060	superfamily_SSF53822,HMMPfam_ANF_receptor	PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_SSF53822,HMMPfam_ANF_receptor,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3	-	no_errors
THBS3	7059	genome.wustl.edu	37	1	155176016	155176016	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155176016	155176016	G	C	SNP	THBS3	NM_007112	human	genbank	57_37b	-1	reviewed	silent	c.261	p.A87	1.000	HMMSmart_SM00210	HMMSmart_SM00210,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_EGF_2,superfamily_TSP type-3 repeat,HMMPfam_TSP_3,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_TSP_C	-	no_errors
TM4SF1	4071	genome.wustl.edu	37	3	149095318	149095318	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	149095318	149095318	C	A	SNP	TM4SF1	NM_014220	human	genbank	57_37b	-1	reviewed	missense	c.17	p.C6F	0.976	HMMPfam_L6_membrane	HMMPfam_L6_membrane	-	no_errors
TNP1	7141	genome.wustl.edu	37	2	217724400	217724400	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	217724400	217724400	G	C	SNP	TNP1	NM_003284	human	genbank	57_37b	-1	validated	missense	c.158	p.S53C	1.000	HMMPfam_TP1	HMMPfam_TP1,PatternScan_TP1	-	no_errors
TRAPPC9	83696	genome.wustl.edu	37	8	141285887	141285887	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	141285887	141285887	A	C	SNP	TRAPPC9	NM_031466	human	genbank	57_37b	-1	reviewed	missense	c.2442	p.D814E	0.989	HMMPfam_Trs120	HMMPfam_Trs120	-	no_errors
TRIM46	80128	genome.wustl.edu	37	1	155156289	155156289	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155156289	155156289	G	A	SNP	TRIM46	NM_025058	human	genbank	57_37b	+1	validated	missense	c.1903	p.G635R	1.000	NULL	superfamily_RING/U-box,HMMPfam_zf-C3HC4,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179463526	179463526	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179463526	179463526	C	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.49201	p.V16401M	0.999	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
TULP3	7289	genome.wustl.edu	37	12	3018748	3018748	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	3018748	3018748	T	A	SNP	TULP3	NM_003324	human	genbank	57_37b	+1	reviewed	splice_site	c.93+2	e2+2	0.998	-	-	-	no_errors
VILL	50853	genome.wustl.edu	37	3	38035842	38035842	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38035842	38035842	G	A	SNP	VILL	NM_015873	human	genbank	57_37b	+1	reviewed	missense	c.226	p.A76T	0.943	HMMSmart_SM00262,superfamily_Actin depolymerizing proteins,HMMPfam_Gelsolin	HMMSmart_SM00262,superfamily_Actin depolymerizing proteins,HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24,PatternScan_CYTOCHROME_B5_1,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors
VPS54	51542	genome.wustl.edu	37	2	64148377	64148377	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	64148377	64148377	T	C	SNP	VPS54	NM_016516	human	genbank	57_37b	-1	reviewed	missense	c.1832	p.H611R	1.000	NULL	HMMPfam_Vps54	-	no_errors
WDR17	116966	genome.wustl.edu	37	4	177071740	177071740	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	177071740	177071740	G	C	SNP	WDR17	NM_170710	human	genbank	57_37b	+1	reviewed	missense	c.2372	p.R791T	1.000	NULL	HMMSmart_WD40,HMMPfam_WD40,superfamily_Amine_DH_B_like,superfamily_WD40_like,PatternScan_WD_REPEATS_1	-	no_errors
WHSC1	7468	genome.wustl.edu	37	4	1953848	1953848	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1953848	1953848	C	G	SNP	WHSC1	NM_001042424	human	genbank	57_37b	+1	reviewed	missense	c.2027	p.P676R	0.219	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
XPNPEP3	63929	genome.wustl.edu	37	22	41282335	41282335	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	41282335	41282335	G	C	SNP	XPNPEP3	NM_022098	human	genbank	57_37b	+1	validated	missense	c.608	p.W203S	1.000	superfamily_Creatinase/prolidase N-terminal domain,HMMPfam_AMP_N	superfamily_Creatinase/prolidase N-terminal domain,HMMPfam_AMP_N,superfamily_Creatinase/aminopeptidase,HMMPfam_Peptidase_M24	-	no_errors
ZBTB39	9880	genome.wustl.edu	37	12	57398550	57398550	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57398550	57398550	G	A	SNP	ZBTB39	NM_014830	human	genbank	57_37b	-1	provisional	missense	c.152	p.A51V	0.991	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2	-	no_errors
ZBTB48	3104	genome.wustl.edu	37	1	6642356	6642356	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6642356	6642356	A	G	SNP	ZBTB48	NM_005341	human	genbank	57_37b	+1	validated	missense	c.929	p.N310S	1.000	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
ZC3H4	23211	genome.wustl.edu	37	19	47615759	47615767	+	In_Frame_Del	DEL	GAAGGCGTT	GAAGGCGTT	-	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	GAAGGCGTT	GAAGGCGTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	47615759	47615767	GAAGGCGTT	-	DEL	ZC3H4	NM_015168	human	genbank	57_37b	-1	validated	in_frame_del	c.83_75	p.TPS26in_frame_del	1.000:1.000:1.000:1.000:0.998:1.000:1.000:0.999:1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1	(deletion:cds_exon[47615681,47615841])	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77617392	77617392	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	77617392	77617392	G	T	SNP	ZFHX4	NM_024721	human	genbank	57_37b	+1	validated	missense	c.1069	p.D357Y	1.000	NULL	HMMSmart_SM00355,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
ZFR	51663	genome.wustl.edu	37	5	32355898	32355898	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32355898	32355898	T	C	SNP	ZFR	NM_016107	human	genbank	57_37b	-1	validated	missense	c.3193	p.K1065E	1.000	NULL	HMMSmart_ZnF_U1,HMMSmart_ZnF_C2H2,superfamily_SSF57667,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_DZF,HMMPfam_DZF	-	no_errors
ZNF233	353355	genome.wustl.edu	37	19	44777622	44777622	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44777622	44777622	G	A	SNP	ZNF233	NM_181756	human	genbank	57_37b	+1	provisional	missense	c.809	p.G270D	0.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF283	284349	genome.wustl.edu	37	19	44351903	44351903	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44351903	44351903	T	A	SNP	ZNF283	NM_181845	human	genbank	57_37b	+1	validated	missense	c.1150	p.F384I	0.952	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF514	84874	genome.wustl.edu	37	2	95815408	95815408	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	95815408	95815408	A	T	SNP	ZNF514	NM_032788	human	genbank	57_37b	-1	provisional	silent	c.822	p.S274	0.039	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_KRAB,superfamily_Krueppel-associated_box,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
ZNF69	7620	genome.wustl.edu	37	19	12015904	12015904	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12015904	12015904	G	A	SNP	ZNF69	ENST00000429654	human	ensembl	57_37b	+1	known	missense	c.692	p.C231Y	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF732	0	genome.wustl.edu	37	4	266210	266210	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07C-01A-11D-A045-09	TCGA-A8-A07C-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	266210	266210	G	T	SNP	ZNF732	NM_001137608	human	genbank	57_37b	-1	provisional	missense	c.436	p.H146N	0.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,superfamily_SSF48695,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
