Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
AARS2	57505	genome.wustl.edu	37	6	44274674	44274674	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44274674	44274674	C	G	SNP	AARS2	NM_020745	human	genbank	57_37b	-1	validated	missense	c.1135	p.V379L	1.000	HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd	superfamily_SSF55681,HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD	-	no_errors
ADAMTS4	9507	genome.wustl.edu	37	1	161168097	161168097	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	161168097	161168097	C	T	SNP	ADAMTS4	NM_005099	human	genbank	57_37b	-1	reviewed	silent	c.321	p.L107	1.000	HMMPfam_Pep_M12B_propep	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	148055076	148055076	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	148055076	148055076	C	T	SNP	AFF2	NM_002025	human	genbank	57_37b	+1	reviewed	missense	c.3343	p.R1115C	1.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
AMOTL1	154810	genome.wustl.edu	37	11	94599220	94599220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	94599220	94599220	G	A	SNP	AMOTL1	NM_130847	human	genbank	57_37b	+1	reviewed	missense	c.2375	p.R792H	1.000	NULL	NULL	-	no_errors
APOB	338	genome.wustl.edu	37	2	21225768	21225768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	21225768	21225768	C	T	SNP	APOB	NM_000384	human	genbank	57_37b	-1	reviewed	missense	c.12526	p.V4176I	0.000	NULL	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors
ARHGAP6	395	genome.wustl.edu	37	X	11196301	11196301	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	11196301	11196301	G	A	SNP	ARHGAP6	NM_013427	human	genbank	57_37b	-1	reviewed	silent	c.1548	p.C516	0.965	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
BEND4	0	genome.wustl.edu	37	4	42145757	42145757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	42145757	42145757	C	T	SNP	BEND4	NM_207406	human	genbank	57_37b	-1	validated	missense	c.742	p.V248I	1.000	NULL	HMMPfam_BEN	-	no_errors
BHLHE41	79365	genome.wustl.edu	37	12	26276608	26276608	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	26276608	26276608	C	T	SNP	BHLHE41	NM_030762	human	genbank	57_37b	-1	validated	missense	c.301	p.A101T	1.000	superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353	HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353,HMMPfam_Hairy_orange,HMMSmart_SM00511	-	no_errors
C14orf68	283600	genome.wustl.edu	37	14	100795338	100795338	+	Silent	SNP	G	G	C	rs8015259	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	100795338	100795338	G	C	SNP	C14orf68	NM_207117	human	genbank	57_37b	+1	validated	silent	c.603	p.A201	0.005	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	HMMPfam_Mito_carr,superfamily_Mitochondrial carrier	-	
C14orf79	122616	genome.wustl.edu	37	14	105461050	105461050	+	Missense_Mutation	SNP	C	C	T	rs34350817	byCluster;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105461050	105461050	C	T	SNP	C14orf79	NM_174891	human	genbank	57_37b	+1	validated	missense	c.932	p.T311I	0.000	NULL	NULL	-	
C1orf168	199920	genome.wustl.edu	37	1	57258333	57258333	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	57258333	57258333	A	G	SNP	C1orf168	NM_001004303	human	genbank	57_37b	-1	validated	silent	c.153	p.N51	0.302	NULL	superfamily_SH3-domain	-	no_errors
C1orf173	127254	genome.wustl.edu	37	1	75038229	75038229	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	75038229	75038229	A	G	SNP	C1orf173	NM_001002912	human	genbank	57_37b	-1	validated	silent	c.3165	p.D1055	0.000	NULL	NULL	-	no_errors
CATSPER4	378807	genome.wustl.edu	37	1	26517267	26517267	+	Missense_Mutation	SNP	A	A	G	rs41284333	byCluster;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26517267	26517267	A	G	SNP	CATSPER4	NM_198137	human	genbank	57_37b	+1	validated	missense	c.149	p.H50R	0.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	
CBLB	868	genome.wustl.edu	37	3	105421144	105421144	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	105421144	105421144	C	T	SNP	CBLB	NM_170662	human	genbank	57_37b	-1	validated	missense	c.1753	p.D585N	1.000	NULL	HMMPfam_Cbl_N,superfamily_N-terminal domain of cbl (N-cbl),HMMPfam_Cbl_N2,superfamily_EF-hand,HMMPfam_Cbl_N3,superfamily_SH2 domain,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_UBA,HMMSmart_SM00165	-	no_errors
CCDC102B	79839	genome.wustl.edu	37	18	66505946	66505946	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	66505946	66505946	C	A	SNP	CCDC102B	NM_001093729	human	genbank	57_37b	+1	validated	missense	c.610	p.Q204K	0.049	NULL	NULL	-	no_errors
CCDC66	285331	genome.wustl.edu	37	3	56655730	56655730	+	RNA	DEL	T	T	-	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	56655730	56655730	T	-	DEL	CCDC66	NR_024460	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.001	-	-	(deletion:rna[56655560,56655864])	no_errors
CCDC67	159989	genome.wustl.edu	37	11	93104384	93104384	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	93104384	93104384	A	C	SNP	CCDC67	NM_181645	human	genbank	57_37b	+1	validated	missense	c.727	p.K243Q	1.000	NULL	NULL	-	no_errors
CCND3	896	genome.wustl.edu	37	6	41903782	41903782	+	Missense_Mutation	SNP	A	A	C	rs1051130	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41903782	41903782	A	C	SNP	CCND3	NM_001760	human	genbank	57_37b	-1	reviewed	missense	c.775	p.S259A	0.003	HMMPfam_Cyclin_C	superfamily_Cyclin_like,HMMPfam_Cyclin_N,PatternScan_CYCLINS,HMMSmart_CYCLIN,HMMPfam_Cyclin_C	-	
CD37	951	genome.wustl.edu	37	19	49838991	49838991	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49838991	49838991	C	A	SNP	CD37	NM_001774	human	genbank	57_37b	+1	reviewed	missense	c.90	p.F30L	1.000	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors
CDH12	1010	genome.wustl.edu	37	5	21751992	21751992	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	21751992	21751992	C	T	SNP	CDH12	NM_004061	human	genbank	57_37b	-1	reviewed	missense	c.2239	p.V747M	0.748	HMMPfam_Cadherin_C	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
CFH	3075	genome.wustl.edu	37	1	196706080	196706080	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196706080	196706080	A	T	SNP	CFH	NM_000186	human	genbank	57_37b	+1	reviewed	missense	c.2540	p.E847V	0.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors
COL4A3	1285	genome.wustl.edu	37	2	228121089	228121089	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	228121089	228121089	T	A	SNP	COL4A3	NM_000091	human	genbank	57_37b	+1	reviewed	missense	c.964	p.L322I	0.886	HMMPfam_Collagen	HMMPfam_Collagen,PatternScan_CARBOXYPEPT_SER_SER,superfamily_C-type lectin-like,HMMPfam_C4,HMMSmart_SM00111	-	no_errors
CTH	1491	genome.wustl.edu	37	1	70895527	70895527	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70895527	70895527	C	G	SNP	CTH	NM_001902	human	genbank	57_37b	+1	reviewed	nonsense	c.639	p.Y213*	1.000	superfamily_PLP-dependent transferases,HMMPfam_Cys_Met_Meta_PP,PatternScan_CYS_MET_METAB_PP	superfamily_PLP-dependent transferases,HMMPfam_Cys_Met_Meta_PP,PatternScan_CYS_MET_METAB_PP	-	no_errors
CTNNA3	29119	genome.wustl.edu	37	10	68139014	68139014	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	68139014	68139014	C	T	SNP	CTNNA3	NM_001127384	human	genbank	57_37b	-1	validated	missense	c.1628	p.R543Q	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors
CYB5D1	124637	genome.wustl.edu	37	17	7761926	7761926	+	Silent	SNP	C	T	T	rs3744252	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7761926	7761926	C	T	SNP	CYB5D1	NM_144607	human	genbank	57_37b	+1	validated	silent	c.240	p.I80	0.977	superfamily_Cytochrome b5-like heme/steroid binding domain	superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5	-	
DACH2	117154	genome.wustl.edu	37	X	85769372	85769372	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	85769372	85769372	G	A	SNP	DACH2	NM_053281	human	genbank	57_37b	+1	reviewed	silent	c.618	p.S206	0.991	NULL	HMMPfam_Ski_Sno,superfamily_Putative DNA-binding domain	-	no_errors
DNAH17	8632	genome.wustl.edu	37	17	76481693	76481693	+	Silent	SNP	C	C	G	rs11872051	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	76481693	76481693	C	G	SNP	DNAH17	ENST00000389840	human	ensembl	57_37b	-1	known	silent	c.7380	p.T2460	0.001	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	
DNAJC13	23317	genome.wustl.edu	37	3	132218599	132218599	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	132218599	132218599	C	T	SNP	DNAJC13	NM_015268	human	genbank	57_37b	+1	validated	missense	c.4363	p.R1455C	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_AA_TRNA_LIGASE_I	-	no_errors
DPP3	10072	genome.wustl.edu	37	11	66276589	66276589	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66276589	66276589	C	A	SNP	DPP3	NM_005700	human	genbank	57_37b	+1	reviewed	missense	c.2081	p.A694D	0.996	HMMPfam_Peptidase_M49	HMMPfam_Peptidase_M49	-	no_errors
DYNLL1P1	0	genome.wustl.edu	37	14	81712859	81712859	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81712859	81712859	T	A	SNP	DYNLL1P1	ENST00000380761	human	ensembl	57_37b	-1	known	missense	c.49	p.M17L	1.000	HMMPfam_Dynein_light,superfamily_DLC	HMMPfam_Dynein_light,superfamily_DLC	-	no_errors
DYRK3	8444	genome.wustl.edu	37	1	206821149	206821149	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	206821149	206821149	A	G	SNP	DYRK3	NM_003582	human	genbank	57_37b	+1	reviewed	silent	c.606	p.R202	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
EAF2	55840	genome.wustl.edu	37	3	121573546	121573546	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	121573546	121573546	C	G	SNP	EAF2	NM_018456	human	genbank	57_37b	+1	validated	missense	c.214	p.P72A	1.000	HMMPfam_EAF	HMMPfam_EAF	-	no_errors
EMR1	2015	genome.wustl.edu	37	19	6937658	6937658	+	Missense_Mutation	SNP	C	C	T	rs111579004	by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6937658	6937658	C	T	SNP	EMR1	NM_001974	human	genbank	57_37b	+1	reviewed	missense	c.2654	p.T885M	0.832	superfamily_Family A G protein-coupled receptor-like	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_2,superfamily_Family A G protein-coupled receptor-like,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	
ENSG00000166492	0	genome.wustl.edu	37	11	3439429	3439429	+	Splice_Site	SNP	C	C	G	rs79635837	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	3439429	3439429	C	G	SNP	ENSG00000166492	ENST00000448322	human	ensembl	57_37b	-1	known	splice_site	c.NULL	NULL	1.000	-	-	-	
ENSG00000181943	0	genome.wustl.edu	37	11	55259300	55259300	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55259300	55259300	C	A	SNP	ENSG00000181943	ENST00000314657	human	ensembl	57_37b	+1	known	silent	c.582	p.V194	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
ENSG00000197041	0	genome.wustl.edu	37	12	104424692	104424692	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	104424692	104424692	C	T	SNP	ENSG00000197041	ENST00000355965	human	ensembl	57_37b	+1	known	nonsense	c.136	p.R46*	0.983	superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM	superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM,PatternScan_PG_MUTASE	-	no_errors
ENSG00000201006	0	genome.wustl.edu	37	2	121408892	121408892	+	RNA	SNP	A	A	T	rs7603727	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	121408892	121408892	A	T	SNP	ENSG00000201006	ENST00000364136	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001	-	-	-	
ENSG00000245549	0	genome.wustl.edu	37	1	16947064	16947064	+	RNA	SNP	G	G	C	rs12041479	by2Hit2Allele	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16947064	16947064	G	C	SNP	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.011	-	-	-	
FAM124A	220108	genome.wustl.edu	37	13	51826286	51826286	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	51826286	51826286	C	A	SNP	FAM124A	NM_145019	human	genbank	57_37b	+1	predicted	missense	c.891	p.S297R	0.833	NULL	NULL	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92534068	92534068	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	92534068	92534068	G	C	SNP	FAT3	NM_001008781	human	genbank	57_37b	+1	validated	missense	c.7889	p.G2630A	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
FSCN3	29999	genome.wustl.edu	37	7	127238597	127238597	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	127238597	127238597	T	C	SNP	FSCN3	NM_020369	human	genbank	57_37b	+1	provisional	missense	c.1069	p.F357L	0.979	superfamily_Actin_crosslink,HMMPfam_Fascin	superfamily_Actin_crosslink,HMMPfam_Fascin	-	no_errors
GAA	2548	genome.wustl.edu	37	17	78090815	78090815	+	Missense_Mutation	SNP	G	C	C	rs1800312	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78090815	78090815	G	C	SNP	GAA	NM_000152	human	genbank	57_37b	+1	reviewed	missense	c.2238	p.W746C	1.000	HMMPfam_Glyco_hydro_31	superfamily_P_trefoil,HMMSmart_PD,HMMPfam_Trefoil,PatternScan_P_TREFOIL,HMMPfam_Glyco_hydro_31,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	
GABRB1	2560	genome.wustl.edu	37	4	47427898	47427898	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	47427898	47427898	C	T	SNP	GABRB1	NM_000812	human	genbank	57_37b	+1	reviewed	missense	c.1288	p.R430C	1.000	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
GDPD5	81544	genome.wustl.edu	37	11	75152243	75152243	+	Missense_Mutation	SNP	C	C	T	rs571353	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	75152243	75152243	C	T	SNP	GDPD5	NM_030792	human	genbank	57_37b	-1	validated	missense	c.1438	p.A480T	0.015	superfamily_PLC-like phosphodiesterases,HMMPfam_GDPD	superfamily_PLC-like phosphodiesterases,HMMPfam_GDPD	-	
GRIK2	2898	genome.wustl.edu	37	6	102337557	102337557	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	102337557	102337557	C	T	SNP	GRIK2	NM_021956	human	genbank	57_37b	+1	reviewed	nonsense	c.1567	p.R523*	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
HECTD3	79654	genome.wustl.edu	37	1	45472650	45472650	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45472650	45472650	A	C	SNP	HECTD3	NM_024602	human	genbank	57_37b	-1	validated	missense	c.1594	p.F532V	1.000	HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	superfamily_Galactose-binding domain-like,HMMPfam_APC10,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_HECT	-	no_errors
HHAT	55733	genome.wustl.edu	37	1	210796928	210796928	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	210796928	210796928	C	T	SNP	HHAT	NM_001122834	human	genbank	57_37b	+1	validated	missense	c.1304	p.S435F	0.998	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
HIST1H2AE	3012	genome.wustl.edu	37	6	26217305	26217305	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26217305	26217305	C	T	SNP	HIST1H2AE	NM_021052	human	genbank	57_37b	+1	reviewed	missense	c.103	p.L35F	1.000	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors
HTR3E	285242	genome.wustl.edu	37	3	183823994	183823994	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183823994	183823994	T	G	SNP	HTR3E	NM_182589	human	genbank	57_37b	+1	reviewed	missense	c.1049	p.V350G	1.000	superfamily_Neu_channel_TM	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
IGHV3-6	0	genome.wustl.edu	37	14	106511843	106511843	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	106511843	106511843	T	A	SNP	IGHV3-6	ENST00000422244	human	ensembl	57_37b	-1	known	missense	c.281	p.N94I	0.034	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors
IL13RA2	3598	genome.wustl.edu	37	X	114250277	114250277	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114250277	114250277	C	G	SNP	IL13RA2	NM_000640	human	genbank	57_37b	-1	reviewed	missense	c.202	p.E68Q	0.988	superfamily_FN_III-like	superfamily_FN_III-like,HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2	-	no_errors
INSRR	3645	genome.wustl.edu	37	1	156821130	156821130	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156821130	156821130	C	G	SNP	INSRR	NM_014215	human	genbank	57_37b	-1	validated	missense	c.1181	p.G394A	1.000	superfamily_SSF52058,HMMPfam_Recep_L_domain	superfamily_SSF52058,HMMPfam_Recep_L_domain,HMMPfam_Furin-like,superfamily_Grow_fac_recept,HMMSmart_FU,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
KCNA1	3736	genome.wustl.edu	37	12	5021107	5021107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	5021107	5021107	C	T	SNP	KCNA1	NM_000217	human	genbank	57_37b	+1	reviewed	missense	c.563	p.T188M	1.000	superfamily_SSF81324	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors
KIAA0947	23379	genome.wustl.edu	37	5	5462931	5462931	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	5462931	5462931	A	C	SNP	KIAA0947	NM_015325	human	genbank	57_37b	+1	validated	missense	c.3484	p.S1162R	0.002	NULL	NULL	-	no_errors
KIAA1602	57701	genome.wustl.edu	37	12	50190653	50190653	+	Missense_Mutation	SNP	C	C	T	rs3741555	byCluster;byFrequency;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50190653	50190653	C	T	SNP	KIAA1602	ENST00000433948	human	ensembl	57_37b	-1	known	missense	c.133	p.A45T	0.990	NULL	NULL	-	
KRT85	3891	genome.wustl.edu	37	12	52760887	52760887	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	52760887	52760887	G	A	SNP	KRT85	NM_002283	human	genbank	57_37b	-1	reviewed	silent	c.303	p.N101	0.999	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
KTN1	3895	genome.wustl.edu	37	14	56114796	56114796	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	56114796	56114796	G	A	SNP	KTN1	NM_001079521	human	genbank	57_37b	+1	validated	missense	c.2261	p.G754E	1.000	superfamily_Spectrin repeat	superfamily_Spectrin repeat	-	no_errors
LCE1A	353131	genome.wustl.edu	37	1	152800092	152800092	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152800092	152800092	C	T	SNP	LCE1A	NM_178348	human	genbank	57_37b	+1	validated	silent	c.144	p.S48	0.943	NULL	NULL	-	no_errors
LOC100287145	0	genome.wustl.edu	37	20	43804746	43804746	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	43804746	43804746	T	C	SNP	LOC100287145	XM_002343707	human	genbank	57_37b	-1	model	missense	c.184	p.R62G	0.009	NULL	NULL	-	no_errors
LOC100290628	0	genome.wustl.edu	37	1	6194580	6194580	+	Missense_Mutation	SNP	G	A	A	rs3765451	byCluster;byFrequency;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6194580	6194580	G	A	SNP	LOC100290628	XM_002347494	human	genbank	57_37b	-1	model	missense	c.25	p.R9C	0.018	NULL	NULL	-	
LOC345645	345645	genome.wustl.edu	37	5	55571784	55571784	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	55571784	55571784	G	C	SNP	LOC345645	XM_002342506	human	genbank	57_37b	-1	model	silent	c.633	p.L211	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	-	no_errors
LOC440518	440518	genome.wustl.edu	37	19	22784069	22784069	+	RNA	SNP	G	G	A	rs34043019	byCluster;byFrequency;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22784069	22784069	G	A	SNP	LOC440518	XR_041921	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-	
LOC441228	441228	genome.wustl.edu	37	7	56358918	56358918	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	56358918	56358918	G	C	SNP	LOC441228	XR_016387	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.860	-	-	-	no_errors
LOC644310	644310	genome.wustl.edu	37	X	51666693	51666693	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	51666693	51666693	C	T	SNP	LOC644310	XM_927480	human	genbank	57_37b	+1	model	missense	c.46	p.R16C	0.005	superfamily_Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase),HMMPfam_UCR_UQCRX_QCR9	superfamily_Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase),HMMPfam_UCR_UQCRX_QCR9	-	no_errors
LOC650157	650157	genome.wustl.edu	37	2	11492086	11492086	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	11492086	11492086	T	A	SNP	LOC650157	XM_001129774	human	genbank	57_37b	+1	model	missense	c.334	p.F112I	1.000	superfamily_Cyclophilin-like,HMMPfam_Pro_isomerase	superfamily_Cyclophilin-like,HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1	-	no_errors
MAD2L1	4085	genome.wustl.edu	37	4	120983241	120983241	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	120983241	120983241	T	A	SNP	MAD2L1	NM_002358	human	genbank	57_37b	-1	reviewed	missense	c.230	p.Y77F	1.000	superfamily_The spindle assembly checkpoint protein mad2,HMMPfam_HORMA	superfamily_The spindle assembly checkpoint protein mad2,HMMPfam_HORMA	-	no_errors
MARCH5	54708	genome.wustl.edu	37	10	94109244	94109244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	94109244	94109244	C	T	SNP	MARCH5	NM_017824	human	genbank	57_37b	+1	validated	missense	c.508	p.R170C	1.000	NULL	HMMSmart_SM00744,HMMPfam_zf-C3HC4	-	no_errors
MSH2	4436	genome.wustl.edu	37	2	47672761	47672761	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	47672761	47672761	C	G	SNP	MSH2	NM_000251	human	genbank	57_37b	+1	reviewed	missense	c.1351	p.Q451E	1.000	HMMPfam_MutS_III,superfamily_DNA_repair_MutS_domIII,HMMSmart_MUTSd	HMMPfam_MutS_I,HMMPfam_MutS_II,HMMPfam_MutS_III,superfamily_DNA_repair_MutS_domIII,HMMSmart_MUTSd,HMMPfam_MutS_IV,HMMPfam_MutS_V,superfamily_SSF52540,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2	-	no_errors
MSH4	4438	genome.wustl.edu	37	1	76269499	76269499	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	76269499	76269499	C	T	SNP	MSH4	NM_002440	human	genbank	57_37b	+1	validated	nonsense	c.328	p.R110*	0.012	NULL	superfamily_DNA_mismatch_repair_MutS_connt,HMMPfam_MutS_II,HMMPfam_MutS_III,superfamily_DNA_repair_MutS_domIII,HMMSmart_MUTSd,HMMPfam_MutS_IV,HMMPfam_MutS_V,superfamily_SSF52540,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100678735	100678735	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100678735	100678735	C	G	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	silent	c.4038	p.T1346	0.001	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MYH10	4628	genome.wustl.edu	37	17	8417136	8417136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8417136	8417136	G	A	SNP	MYH10	NM_005964	human	genbank	57_37b	-1	validated	missense	c.2488	p.R830W	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_Myosin S1 fragment N-terminal domain,HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors
MYLK	4638	genome.wustl.edu	37	3	123456283	123456283	+	Silent	SNP	C	C	T	rs41271441	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	123456283	123456283	C	T	SNP	MYLK	NM_053025	human	genbank	57_37b	-1	reviewed	silent	c.696	p.T232	0.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	
NARFL	64428	genome.wustl.edu	37	16	784765	784765	+	Missense_Mutation	SNP	C	C	T	rs9928077	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	784765	784765	C	T	SNP	NARFL	ENST00000301694	human	ensembl	57_37b	-1	known	missense	c.413	p.R138H	0.990	NULL	NULL	-	
NEDD9	4739	genome.wustl.edu	37	6	11191331	11191331	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	11191331	11191331	C	T	SNP	NEDD9	NM_001142393	human	genbank	57_37b	-1	validated	silent	c.771	p.P257	0.001	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_Serine_rich	-	no_errors
NELL1	4745	genome.wustl.edu	37	11	20699519	20699519	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	20699519	20699519	G	A	SNP	NELL1	NM_006157	human	genbank	57_37b	+1	reviewed	missense	c.97	p.V33I	0.660	HMMSmart_SM00210	HMMSmart_SM00210,HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_VWC,HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors
NUDCD2	134492	genome.wustl.edu	37	5	162881017	162881017	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	162881017	162881017	T	A	SNP	NUDCD2	NM_145266	human	genbank	57_37b	-1	provisional	missense	c.430	p.N144Y	1.000	NULL	superfamily_HSP20-like chaperones,HMMPfam_CS	-	no_errors
OPN4	94233	genome.wustl.edu	37	10	88419766	88419766	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	88419766	88419766	C	T	SNP	OPN4	NM_001030015	human	genbank	57_37b	+1	validated	silent	c.948	p.F316	0.999	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors
OR11H12	440153	genome.wustl.edu	37	14	19377728	19377728	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	19377728	19377728	C	A	SNP	OR11H12	NM_001013354	human	genbank	57_37b	+1	provisional	silent	c.135	p.L45	0.982	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OR11L1	391189	genome.wustl.edu	37	1	248005132	248005132	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248005132	248005132	A	G	SNP	OR11L1	NM_001001959	human	genbank	57_37b	-1	provisional	missense	c.67	p.W23R	0.931	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR8B12	219858	genome.wustl.edu	37	11	124413190	124413190	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	124413190	124413190	G	A	SNP	OR8B12	NM_001005195	human	genbank	57_37b	-1	provisional	missense	c.361	p.R121C	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OVGP1	5016	genome.wustl.edu	37	1	111957196	111957196	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111957196	111957196	C	A	SNP	OVGP1	NM_002557	human	genbank	57_37b	-1	reviewed	missense	c.1927	p.V643F	0.000	NULL	HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases,superfamily_Chitinase insertion domain	-	no_errors
PCNXL2	80003	genome.wustl.edu	37	1	233120153	233120153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	233120153	233120153	T	C	SNP	PCNXL2	NM_014801	human	genbank	57_37b	-1	provisional	missense	c.6311	p.E2104G	0.007	NULL	PatternScan_DNAJ_1,HMMPfam_Pecanex_C	-	no_errors
PCSK5	5125	genome.wustl.edu	37	9	78789900	78789900	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	78789900	78789900	A	G	SNP	PCSK5	NM_006200	human	genbank	57_37b	+1	reviewed	splice_site	c.1757-2	e14-2	0.998	-	-	-	no_errors
PELI2	57161	genome.wustl.edu	37	14	56763595	56763595	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	56763595	56763595	G	A	SNP	PELI2	NM_021255	human	genbank	57_37b	+1	validated	missense	c.974	p.R325Q	1.000	HMMPfam_Pellino	HMMPfam_Pellino	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178941946	178941946	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178941946	178941946	A	G	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	silent	c.2265	p.L755	0.890	superfamily_Kinase_like	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIP5K1A	8394	genome.wustl.edu	37	1	151215029	151215029	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151215029	151215029	A	G	SNP	PIP5K1A	NM_001135638	human	genbank	57_37b	+1	validated	silent	c.1626	p.Q542	0.839	NULL	superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K	-	no_errors
PRDM14	63978	genome.wustl.edu	37	8	70981496	70981496	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	70981496	70981496	C	T	SNP	PRDM14	NM_024504	human	genbank	57_37b	-1	validated	silent	c.600	p.E200	0.993	NULL	HMMSmart_SET,superfamily_SSF82199,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,superfamily_SSF57667,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PTPRD	5789	genome.wustl.edu	37	9	8471045	8471045	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8471045	8471045	C	T	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	missense	c.3454	p.G1152R	1.000	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
PTPRT	11122	genome.wustl.edu	37	20	40757458	40757458	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	40757458	40757458	C	T	SNP	PTPRT	NM_133170	human	genbank	57_37b	-1	reviewed	missense	c.2840	p.R947Q	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase	HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1,superfamily_Immunoglobulin,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
RIMBP2	23504	genome.wustl.edu	37	12	130912757	130912757	+	Silent	SNP	C	T	T	rs2277356	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130912757	130912757	C	T	SNP	RIMBP2	NM_015347	human	genbank	57_37b	-1	validated	silent	c.2328	p.R776	1.000	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	-	
RSBN1	54665	genome.wustl.edu	37	1	114308631	114308631	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114308631	114308631	G	A	SNP	RSBN1	NM_018364	human	genbank	57_37b	-1	validated	silent	c.2380	p.L794	1.000	NULL	NULL	-	no_errors
SBF2	81846	genome.wustl.edu	37	11	9875162	9875162	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	9875162	9875162	G	A	SNP	SBF2	NM_030962	human	genbank	57_37b	-1	reviewed	nonsense	c.2461	p.R821*	1.000	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_GRAM,HMMSmart_SM00568,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
SDR16C5	195814	genome.wustl.edu	37	8	57214113	57214113	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	57214113	57214113	C	A	SNP	SDR16C5	NM_138969	human	genbank	57_37b	-1	validated	nonsense	c.856	p.G286*	0.000	NULL	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short	-	no_errors
SLC13A4	26266	genome.wustl.edu	37	7	135380224	135380224	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	135380224	135380224	G	T	SNP	SLC13A4	NM_012450	human	genbank	57_37b	-1	validated	missense	c.908	p.A303D	0.012	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp	-	no_errors
SLC18A1	6570	genome.wustl.edu	37	8	20008221	20008221	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	20008221	20008221	G	T	SNP	SLC18A1	NM_001135691	human	genbank	57_37b	-1	validated	silent	c.1050	p.L350	0.982	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
SLC18A1	6570	genome.wustl.edu	37	8	20022582	20022582	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	20022582	20022582	C	G	SNP	SLC18A1	NM_001135691	human	genbank	57_37b	-1	validated	missense	c.895	p.D299H	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
SLC38A10	124565	genome.wustl.edu	37	17	79244802	79244802	+	Silent	SNP	T	C	C	rs2292184	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79244802	79244802	T	C	SNP	SLC38A10	NM_001037984	human	genbank	57_37b	-1	validated	silent	c.1047	p.T349	0.639	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	
SLC45A2	51151	genome.wustl.edu	37	5	33984503	33984503	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	33984503	33984503	G	C	SNP	SLC45A2	NM_016180	human	genbank	57_37b	-1	reviewed	missense	c.186	p.S62R	1.000	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter	-	no_errors
SLC4A4	8671	genome.wustl.edu	37	4	72205191	72205191	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	72205191	72205191	G	T	SNP	SLC4A4	NM_001134742	human	genbank	57_37b	+1	reviewed	missense	c.358	p.G120W	1.000	superfamily_PTrfase/Anion_transptr	superfamily_PTrfase/Anion_transptr,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp	-	no_errors
SORBS3	10174	genome.wustl.edu	37	8	22428563	22428563	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	22428563	22428563	C	T	SNP	SORBS3	NM_005775	human	genbank	57_37b	+1	validated	silent	c.1572	p.G524	0.399	superfamily_SH3-domain	HMMSmart_SM00459,HMMPfam_Sorb,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
SPATA6	54558	genome.wustl.edu	37	1	48764474	48764474	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	48764474	48764474	G	T	SNP	SPATA6	NM_019073	human	genbank	57_37b	-1	provisional	missense	c.1378	p.P460T	1.000	NULL	NULL	-	no_errors
SPRYD5	84767	genome.wustl.edu	37	11	55658869	55658869	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55658869	55658869	G	A	SNP	SPRYD5	NM_032681	human	genbank	57_37b	+1	validated	missense	c.1120	p.E374K	0.000	HMMPfam_SPRY	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY	-	no_errors
STAMBP	10617	genome.wustl.edu	37	2	74058086	74058086	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74058086	74058086	C	T	SNP	STAMBP	NM_006463	human	genbank	57_37b	+1	reviewed	missense	c.103	p.R35W	0.942	NULL	HMMPfam_Mov34,superfamily_SSF102712,HMMSmart_JAB_MPN	-	no_errors
STON1-GTF2A1L	286749	genome.wustl.edu	37	2	48807847	48807847	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	48807847	48807847	G	T	SNP	STON1-GTF2A1L	NM_172311	human	genbank	57_37b	+1	reviewed	missense	c.75	p.K25N	0.802	NULL	superfamily_AP50,HMMPfam_Adap_comp_sub,superfamily_TFIIA_helical,HMMPfam_TFIIA,superfamily_TFIIA_betabarrel	-	no_errors
SYT15	83849	genome.wustl.edu	37	10	46969312	46969312	+	Missense_Mutation	SNP	G	G	A	rs55894256	byCluster;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46969312	46969312	G	A	SNP	SYT15	NM_031912	human	genbank	57_37b	-1	reviewed	missense	c.149	p.T50I	0.000	NULL	PatternScan_CNMP_BINDING_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	
T	6862	genome.wustl.edu	37	6	166580202	166580202	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	166580202	166580202	G	T	SNP	T	NM_003181	human	genbank	57_37b	-1	reviewed	missense	c.349	p.P117T	1.000	HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,HMMPfam_T-box	HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	-	no_errors
TAS1R1	80835	genome.wustl.edu	37	1	6634970	6634970	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6634970	6634970	A	G	SNP	TAS1R1	NM_138697	human	genbank	57_37b	+1	reviewed	missense	c.778	p.M260V	0.892	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
TBC1D9	23158	genome.wustl.edu	37	4	141543579	141543579	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	141543579	141543579	G	A	SNP	TBC1D9	NM_015130	human	genbank	57_37b	-1	validated	missense	c.3571	p.R1191W	1.000	NULL	HMMPfam_GRAM,HMMSmart_SM00568,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164,superfamily_EF-hand	-	no_errors
TGFBI	7045	genome.wustl.edu	37	5	135391372	135391372	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	135391372	135391372	C	T	SNP	TGFBI	NM_000358	human	genbank	57_37b	+1	reviewed	missense	c.1414	p.L472F	1.000	superfamily_FAS1 domain,HMMPfam_Fasciclin,HMMSmart_SM00554	HMMPfam_EMI,superfamily_FAS1 domain,HMMPfam_Fasciclin,HMMSmart_SM00554	-	no_errors
TLN1	7094	genome.wustl.edu	37	9	35722177	35722177	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35722177	35722177	A	G	SNP	TLN1	NM_006289	human	genbank	57_37b	-1	reviewed	missense	c.887	p.V296A	1.000	HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,superfamily_Talin_cent,HMMPfam_Talin_middle,superfamily_SSF109885,HMMPfam_VBS,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
TLR7	51284	genome.wustl.edu	37	X	12904335	12904335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	12904335	12904335	G	A	SNP	TLR7	NM_016562	human	genbank	57_37b	+1	reviewed	missense	c.708	p.M236I	0.593	superfamily_L domain-like,HMMSmart_SM00365,HMMPfam_LRR_1,HMMSmart_SM00369	superfamily_L domain-like,HMMSmart_SM00365,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00255,HMMPfam_TIR	-	no_errors
TMEM63B	55362	genome.wustl.edu	37	6	44117607	44117607	+	Silent	SNP	C	C	T	rs4714761	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44117607	44117607	C	T	SNP	TMEM63B	NM_018426	human	genbank	57_37b	+1	validated	silent	c.1425	p.I475	1.000	HMMPfam_DUF221	HMMPfam_DUF221	-	
TNFRSF1A	7132	genome.wustl.edu	37	12	6450945	6450945	+	Silent	SNP	T	T	C	rs767455	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6450945	6450945	T	C	SNP	TNFRSF1A	NM_001065	human	genbank	57_37b	-1	reviewed	silent	c.36	p.P12	0.998	NULL	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,PatternScan_EGF_2,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	
TP53	7157	genome.wustl.edu	37	17	7578175	7578175	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578175	7578175	A	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	splice_site	c.672+2	e5+2	1.000	-	-	-	no_errors
TRIOBP	11078	genome.wustl.edu	37	22	38164106	38164106	+	Silent	SNP	C	C	T	rs4821708	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	38164106	38164106	C	T	SNP	TRIOBP	NM_001039141	human	genbank	57_37b	+1	reviewed	silent	c.6498	p.Y2166	1.000	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	
TRPM8	79054	genome.wustl.edu	37	2	234835246	234835246	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234835246	234835246	C	T	SNP	TRPM8	NM_024080	human	genbank	57_37b	+1	validated	missense	c.64	p.R22W	0.944	NULL	HMMPfam_Ion_trans	-	no_errors
TRPS1	7227	genome.wustl.edu	37	8	116632015	116632015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	116632015	116632015	G	A	SNP	TRPS1	NM_014112	human	genbank	57_37b	-1	reviewed	missense	c.310	p.P104S	1.000	NULL	HMMSmart_ZnF_C2H2,superfamily_SSF57716,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
TSSK1B	83942	genome.wustl.edu	37	5	112769486	112769486	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	112769486	112769486	T	C	SNP	TSSK1B	NM_032028	human	genbank	57_37b	-1	validated	missense	c.1051	p.M351V	0.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179481483	179481483	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179481483	179481483	A	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.40429	p.S13477T	1.000	HMMPfam_I-set,HMMSmart_SM00409	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179615171	179615171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179615171	179615171	G	A	SNP	TTN	NM_133379	human	genbank	57_37b	-1	reviewed	missense	c.11956	p.R3986C	0.006	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IG	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_Titin_Z,HMMPfam_ig,PatternScan_IG_MHC,PatternScan_THIOL_PROTEASE_HIS	-	no_errors
TTYH2	94015	genome.wustl.edu	37	17	72249264	72249264	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72249264	72249264	C	A	SNP	TTYH2	NM_032646	human	genbank	57_37b	+1	reviewed	missense	c.1304	p.P435H	1.000	NULL	HMMPfam_Tweety	-	no_errors
UGT1A6	54578	genome.wustl.edu	37	2	234601870	234601870	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234601870	234601870	A	G	SNP	UGT1A6	NM_001072	human	genbank	57_37b	+1	reviewed	missense	c.220	p.T74A	0.409	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
VWA5B1	127731	genome.wustl.edu	37	1	20656824	20656824	+	Missense_Mutation	SNP	A	A	G	rs2072752	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	20656824	20656824	A	G	SNP	VWA5B1	NM_001039500	human	genbank	57_37b	+1	validated	missense	c.1406	p.N469S	0.973	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	-	
WAS	7454	genome.wustl.edu	37	X	48542728	48542728	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48542728	48542728	C	G	SNP	WAS	NM_000377	human	genbank	57_37b	+1	reviewed	missense	c.189	p.H63Q	0.992	superfamily_SSF50729,HMMPfam_WH1,HMMSmart_WH1	superfamily_SSF50729,HMMPfam_WH1,HMMSmart_WH1,HMMPfam_PBD,HMMSmart_PBD,superfamily_WASP_C,HMMPfam_WH2,HMMSmart_WH2	-	no_errors
XIRP2	129446	genome.wustl.edu	37	2	168074694	168074694	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	168074694	168074694	A	G	SNP	XIRP2	NM_152381	human	genbank	57_37b	+1	validated	missense	c.742	p.M248V	0.834	NULL	HMMPfam_Xin	-	no_errors
ZCCHC18	644353	genome.wustl.edu	37	X	103359682	103359682	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	103359682	103359682	G	C	SNP	ZCCHC18	NM_001143978	human	genbank	57_37b	+1	provisional	missense	c.880	p.A294P	0.000	NULL	NULL	-	no_errors
ZNF555	148254	genome.wustl.edu	37	19	2851535	2851535	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	2851535	2851535	A	C	SNP	ZNF555	NM_152791	human	genbank	57_37b	+1	validated	missense	c.200	p.K67T	0.001	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_IG_MHC	-	no_errors
ZNF644	84146	genome.wustl.edu	37	1	91406699	91406699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	91406699	91406699	G	A	SNP	ZNF644	NM_201269	human	genbank	57_37b	-1	validated	missense	c.212	p.T71M	0.964	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF83	55769	genome.wustl.edu	37	19	53117940	53117940	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53117940	53117940	C	A	SNP	ZNF83	NR_003936	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.000	-	-	-	no_errors
ZZZ3	26009	genome.wustl.edu	37	1	78031328	78031328	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09Q-01A-11W-A019-09	TCGA-A8-A09Q-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	78031328	78031328	T	A	SNP	ZZZ3	NM_015534	human	genbank	57_37b	-1	provisional	missense	c.2709	p.R903S	1.000	NULL	HMMSmart_SM00717,HMMPfam_Myb_DNA-binding,superfamily_Homeodomain-like,HMMPfam_ZZ,PatternScan_ZF_ZZ_1	-	no_errors
