Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
MUC6	4588	genome.wustl.edu	36	11	1018705	1018705	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2954-03A-01W-0733-08	TCGA-AB-2954-11A-01W-0732-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	1018705	1018705	A	G	SNP	MUC6	NM_005961	human	genbank	54_36p	-1	validated	missense	c.1532	p.L511P	0.902	HMMPfam_VWD,HMMSmart_SM00216	HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,HMMSmart_SM00215,HMMPfam_C8,HMMPfam_TIL	-	no_errors
LOC100131718	100131718	genome.wustl.edu	36	8	12448876	12448876	+	RNA	SNP	G	G	C			TCGA-AB-2954-03A-01W-0733-08	TCGA-AB-2954-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	8	12448876	12448876	G	C	SNP	LOC100131718	XR_038665	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.006	-	-	-	pseudogene
LOC122589	122589	genome.wustl.edu	36	14	34928022	34928029	+	RNA	DEL	GGCATCAC	GGCATCAC	-			TCGA-AB-2954-03A-01W-0733-08	TCGA-AB-2954-11A-01W-0732-08	GGCATCAC	GGCATCAC			GGCATCAC	GGCATCAC	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	14	34928022	34928029	GGCATCAC	-	DEL	LOC122589	XR_017454	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	pseudogene
