Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
FLT3	2322	genome.wustl.edu	36	13	27506255	27506256	+	In_Frame_Ins	INS	-	-	ATCATATTCATATTCTCTGAA			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	0	0			-	-	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	13	27506255	27506256	-	ATCATATTCATATTCTCTGAA	INS	FLT3	NM_004119	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.1801_1800	p.600in_frame_insFREYEYD	1.000:0.998	superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors
FAM5C	339479	genome.wustl.edu	36	1	188333917	188333917	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	188333917	188333917	G	A	SNP	FAM5C	NM_199051	human	genbank	54_36p	-1	provisional	missense	c.2155	p.R719C	1.000	NULL	HMMPfam_MACPF,HMMSmart_SM00457	-	no_errors
SLC37A2	219855	genome.wustl.edu	36	11	124460766	124460766	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	11	124460766	124460766	G	A	SNP	SLC37A2	NM_198277	human	genbank	54_36p	+1	validated	missense	c.1411	p.V471I	0.020	superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
NYX	60506	genome.wustl.edu	36	X	41218979	41218979	+	Silent	SNP	C	C	T			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	X	41218979	41218979	C	T	SNP	NYX	NM_022567	human	genbank	54_36p	+1	reviewed	silent	c.1329	p.S443	0.000	NULL	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
FLG	2312	genome.wustl.edu	36	1	150548358	150548358	+	Silent	SNP	G	G	A			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	150548358	150548358	G	A	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	silent	c.5628	p.D1876	0.000	HMMPfam_Filaggrin	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
PKD1L2	114780	genome.wustl.edu	36	16	79798626	79798626	+	Silent	SNP	G	G	A			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	16	79798626	79798626	G	A	SNP	PKD1L2	NM_001076780	human	genbank	54_36p	-1	reviewed	silent	c.876	p.D292	0.997	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
PA2G4	5036	genome.wustl.edu	36	12	54787269	54787269	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	12	54787269	54787269	G	A	SNP	PA2G4	NM_006191	human	genbank	54_36p	+1	reviewed	missense	c.355	p.A119T	1.000	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core,PatternScan_MAP_2	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core,PatternScan_MAP_2,superfamily_SSF46785	-	no_errors
PCDHGA9	56107	genome.wustl.edu	36	5	140763027	140763027	+	Silent	SNP	C	C	T			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	140763027	140763027	C	T	SNP	PCDHGA9	NM_018921	human	genbank	54_36p	+1	reviewed	silent	c.324	p.V108	0.000	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
HERC1	8925	genome.wustl.edu	36	15	61753611	61753611	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	15	61753611	61753611	C	T	SNP	HERC1	NM_003922	human	genbank	54_36p	-1	reviewed	missense	c.7829	p.G2610E	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00320,HMMPfam_SPRY,PatternScan_ARGINASE_2,PatternScan_PHOSPHOPANTETHEINE,superfamily_RCC1/BLIP-II,superfamily_WD40 repeat-like,HMMSmart_SM00449,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
PLIN1	5346	genome.wustl.edu	36	15	88010109	88010109	+	Silent	SNP	G	G	T			TCGA-AB-2998-03A-01D-0739-09	TCGA-AB-2998-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	15	88010109	88010109	G	T	SNP	PLIN	NM_002666	human	genbank	54_36p	-1	reviewed	silent	c.1278	p.V426	0.001	NULL	HMMPfam_Perilipin	-	no_errors
