Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
AARS	16	genome.wustl.edu	37	16	70299461	70299461	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70299461	70299461	C	T	SNP	AARS	NM_001605	human	genbank	57_37b	-1	reviewed	missense	c.1327	p.E443K	1.000	HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd	superfamily_SSF55681,HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD,HMMPfam_DHHA1	-	no_errors
ABCA7	10347	genome.wustl.edu	37	19	1043431	1043431	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1043431	1043431	T	A	SNP	ABCA7	NM_019112	human	genbank	57_37b	+1	reviewed	missense	c.889	p.F297I	0.983	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
ADAMTS13	11093	genome.wustl.edu	37	9	136323154	136323154	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136323154	136323154	A	G	SNP	ADAMTS13	NM_139025	human	genbank	57_37b	+1	reviewed	missense	c.4015	p.I1339V	1.000	superfamily_Spermadhesin CUB domain	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,superfamily_Spermadhesin CUB domain"	-	no_errors
ADSL	158	genome.wustl.edu	37	22	40760339	40760339	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	40760339	40760339	G	C	SNP	ADSL	NM_000026	human	genbank	57_37b	+1	reviewed	missense	c.1161	p.M387I	1.000	superfamily_L-aspartase-like,HMMPfam_ADSL_C	superfamily_L-aspartase-like,HMMPfam_Lyase_1,PatternScan_FUMARATE_LYASES,HMMPfam_ADSL_C	-	no_errors
ANKHD1-EIF4EBP3	404734	genome.wustl.edu	37	5	139889608	139889608	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	139889608	139889608	G	T	SNP	ANKHD1-EIF4EBP3	NM_020690	human	genbank	57_37b	+1	reviewed	missense	c.3946	p.A1316S	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SSF54791,HMMSmart_KH,HMMPfam_KH_1	-	no_errors
ANKRD11	29123	genome.wustl.edu	37	16	89351746	89351747	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89351746	89351747	-	T	INS	ANKRD11	NM_013275	human	genbank	57_37b	-1	validated	frame_shift_ins	c.1204_1203	p.A401fs	1.000:1.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
ANKRD12	23253	genome.wustl.edu	37	18	9255963	9255964	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	9255963	9255964	AG	-	DEL	ANKRD12	NM_015208	human	genbank	57_37b	+1	validated	frame_shift_del	c.2698_2699	p.S903fs	0.991:0.998	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	(deletion:cds_exon[9254209,9258929])	no_errors
ANKRD12	23253	genome.wustl.edu	37	18	9255963	9255964	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	9255963	9255964	AG	-	DEL	ANKRD12	NM_015208	human	genbank	57_37b	+1	validated	frame_shift_del	c.2698_2699	p.S903fs	0.991:0.998	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	(deletion:cds_exon[9254209,9258929])	no_errors
AP3B1	8546	genome.wustl.edu	37	5	77423976	77423976	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	77423976	77423976	G	A	SNP	AP3B1	NM_003664	human	genbank	57_37b	-1	reviewed	missense	c.1846	p.H616Y	1.000	superfamily_ARM repeat	HMMPfam_Adaptin_N,superfamily_ARM repeat	-	no_errors
ATP1A3	478	genome.wustl.edu	37	19	42482107	42482107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42482107	42482107	C	T	SNP	ATP1A3	NM_152296	human	genbank	57_37b	-1	reviewed	missense	c.1924	p.V642I	1.000	superfamily_SSF81665,superfamily_SSF56784,HMMPfam_Hydrolase	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors
BSCL2	26580	genome.wustl.edu	37	11	62458135	62458135	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62458135	62458135	C	T	SNP	BSCL2	NM_001122955	human	genbank	57_37b	-1	reviewed	missense	c.1183	p.D395N	0.019	NULL	HMMPfam_Seipin	-	no_errors
BSCL2	26580	genome.wustl.edu	37	11	62458334	62458334	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62458334	62458334	C	T	SNP	BSCL2	NM_001122955	human	genbank	57_37b	-1	reviewed	missense	c.1078	p.E360K	0.308	NULL	HMMPfam_Seipin	-	no_errors
C1orf103	55791	genome.wustl.edu	37	1	111494337	111494345	+	In_Frame_Del	DEL	GGAGTATCA	GGAGTATCA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	GGAGTATCA	GGAGTATCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111494337	111494345	GGAGTATCA	-	DEL	C1orf103	NM_018372	human	genbank	57_37b	-1	validated	in_frame_del	c.1169_1161	p.DTP388in_frame_del	1.000:0.992:0.965:0.902:0.958:0.986:0.992:0.995:1.000	NULL	NULL	(deletion:cds_exon[111493910,111495437])	no_errors
C1orf103	55791	genome.wustl.edu	37	1	111494337	111494345	+	In_Frame_Del	DEL	GGAGTATCA	GGAGTATCA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	GGAGTATCA	GGAGTATCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111494337	111494345	GGAGTATCA	-	DEL	C1orf103	NM_018372	human	genbank	57_37b	-1	validated	in_frame_del	c.1169_1161	p.DTP388in_frame_del	1.000:0.992:0.965:0.902:0.958:0.986:0.992:0.995:1.000	NULL	NULL	(deletion:cds_exon[111493910,111495437])	no_errors
C6orf136	221545	genome.wustl.edu	37	6	30617375	30617375	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30617375	30617375	G	A	SNP	C6orf136	NM_001109938	human	genbank	57_37b	+1	validated	nonsense	c.113	p.W38*	0.993	NULL	HMMPfam_DUF2358	-	no_errors
C6orf136	221545	genome.wustl.edu	37	6	30617375	30617375	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30617375	30617375	G	A	SNP	C6orf136	NM_001109938	human	genbank	57_37b	+1	validated	nonsense	c.113	p.W38*	0.993	NULL	HMMPfam_DUF2358	-	no_errors
C6orf72	116254	genome.wustl.edu	37	6	149893676	149893676	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	149893676	149893676	G	A	SNP	C6orf72	NM_138785	human	genbank	57_37b	+1	predicted	missense	c.214	p.V72M	1.000	NULL	NULL	-	no_errors
CALHM2	51063	genome.wustl.edu	37	10	105209118	105209118	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105209118	105209118	G	A	SNP	CALHM2	ENST00000393235	human	ensembl	57_37b	-1	known	missense	c.581	p.S194F	0.000	NULL	NULL	-	no_errors
CAND1	55832	genome.wustl.edu	37	12	67699121	67699121	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	67699121	67699121	C	T	SNP	CAND1	NM_018448	human	genbank	57_37b	+1	validated	missense	c.1673	p.S558L	0.994	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT,HMMPfam_TIP120	-	no_errors
CBLB	868	genome.wustl.edu	37	3	105452983	105452983	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	105452983	105452983	T	C	SNP	CBLB	NM_170662	human	genbank	57_37b	-1	validated	missense	c.1073	p.E358G	1.000	superfamily_RING/U-box	HMMPfam_Cbl_N,superfamily_N-terminal domain of cbl (N-cbl),HMMPfam_Cbl_N2,superfamily_EF-hand,HMMPfam_Cbl_N3,superfamily_SH2 domain,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_UBA,HMMSmart_SM00165	-	no_errors
CDH4	1002	genome.wustl.edu	37	20	60348142	60348142	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	60348142	60348142	C	T	SNP	CDH4	NM_001794	human	genbank	57_37b	+1	reviewed	silent	c.480	p.N160	0.000	superfamily_Cadherin	superfamily_Cadherin,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
CEP110	11064	genome.wustl.edu	37	9	123888093	123888093	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	123888093	123888093	C	A	SNP	CEP110	NM_007018	human	genbank	57_37b	+1	reviewed	missense	c.1904	p.A635D	1.000	NULL	superfamily_L domain-like,HMMSmart_SM00365,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_Prefoldin,superfamily_tRNA-binding arm	-	no_errors
CEP72	55722	genome.wustl.edu	37	5	620293	620293	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	620293	620293	A	G	SNP	CEP72	NM_018140	human	genbank	57_37b	+1	reviewed	missense	c.320	p.D107G	1.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRRcap	-	no_errors
COBLL1	22837	genome.wustl.edu	37	2	165550903	165550903	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	165550903	165550903	C	A	SNP	COBLL1	NM_014900	human	genbank	57_37b	-1	validated	missense	c.3113	p.S1038I	1.000	NULL	HMMPfam_Cobl	-	no_errors
COL4A5	1287	genome.wustl.edu	37	X	107924151	107924151	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	107924151	107924151	G	T	SNP	COL4A5	NM_033380	human	genbank	57_37b	+1	reviewed	missense	c.4052	p.G1351V	1.000	HMMPfam_Collagen	HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	-	no_errors
CPXM1	56265	genome.wustl.edu	37	20	2774881	2774881	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2774881	2774881	C	T	SNP	CPXM1	NM_019609	human	genbank	57_37b	-1	reviewed	silent	c.2160	p.P720	0.109	superfamily_Carboxypeptidase regulatory domain	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,HMMSmart_SM00631,PatternScan_CARBOXYPEPT_ZN_2,superfamily_Carboxypeptidase regulatory domain	-	no_errors
CROCCL1	84809	genome.wustl.edu	37	1	16946407	16946407	+	RNA	SNP	T	T	G	rs10796418	byCluster;by2Hit2Allele;byHapMap	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16946407	16946407	T	G	SNP	CROCCL1	NR_026752	human	genbank	57_37b	-1	validated	rna	NULL	NULL	1.000	-	-	-	
CTNNA2	1496	genome.wustl.edu	37	2	80540719	80540719	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	80540719	80540719	A	G	SNP	CTNNA2	ENST00000343114	human	ensembl	57_37b	+1	known	silent	c.33	p.V11	0.010	NULL	HMMPfam_Vinculin,superfamily_Vinculin/catenin	-	no_errors
CYP11A1	1583	genome.wustl.edu	37	15	74631030	74631030	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74631030	74631030	C	A	SNP	CYP11A1	NM_000781	human	genbank	57_37b	-1	reviewed	missense	c.1316	p.R439L	0.353	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP20A1	57404	genome.wustl.edu	37	2	204154590	204154590	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	204154590	204154590	T	C	SNP	CYP20A1	NM_177538	human	genbank	57_37b	+1	reviewed	silent	c.1074	p.I358	1.000	superfamily_Cytochrome_P450,HMMPfam_p450	superfamily_Cytochrome_P450,HMMPfam_p450	-	no_errors
DCST1	149095	genome.wustl.edu	37	1	155014231	155014231	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155014231	155014231	G	T	SNP	DCST1	NM_152494	human	genbank	57_37b	+1	validated	missense	c.790	p.D264Y	0.591	NULL	HMMPfam_DC_STAMP	-	no_errors
DOC2A	8448	genome.wustl.edu	37	16	30017763	30017763	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30017763	30017763	T	C	SNP	DOC2A	NM_003586	human	genbank	57_37b	-1	reviewed	missense	c.1028	p.Y343C	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
DOCK11	139818	genome.wustl.edu	37	X	117749569	117749569	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117749569	117749569	G	C	SNP	DOCK11	NM_144658	human	genbank	57_37b	+1	validated	missense	c.3187	p.A1063P	0.991	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ded_cyto	-	no_errors
DOCK7	85440	genome.wustl.edu	37	1	63005436	63005436	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	63005436	63005436	G	T	SNP	DOCK7	NM_033407	human	genbank	57_37b	-1	validated	nonsense	c.3080	p.S1027*	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
DOCK7	85440	genome.wustl.edu	37	1	63005436	63005436	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	63005436	63005436	G	T	SNP	DOCK7	NM_033407	human	genbank	57_37b	-1	validated	nonsense	c.3080	p.S1027*	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
DSC2	1824	genome.wustl.edu	37	18	28659860	28659860	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	28659860	28659860	G	A	SNP	DSC2	NM_024422	human	genbank	57_37b	-1	reviewed	missense	c.1616	p.T539I	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1	-	no_errors
ENSG00000182625	0	genome.wustl.edu	37	15	58978759	58978759	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	58978759	58978759	G	C	SNP	ENSG00000182625	ENST00000331871	human	ensembl	57_37b	+1	known	silent	c.150	p.V50	0.031	superfamily_G-protein_gamma-like,HMMPfam_G-gamma,HMMSmart_GGL	superfamily_G-protein_gamma-like,HMMPfam_G-gamma,HMMSmart_GGL	-	no_errors
ENSG00000245029	0	genome.wustl.edu	37	1	16889217	16889217	+	RNA	SNP	G	G	C	rs3863775	byCluster;byFrequency;by2Hit2Allele	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16889217	16889217	G	C	SNP	ENSG00000245029	ENST00000500210	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001	-	-	-	
ENSG00000246474	0	genome.wustl.edu	37	14	92336400	92336400	+	RNA	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	92336400	92336400	G	C	SNP	ENSG00000246474	ENST00000499100	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors
EPB41L5	57669	genome.wustl.edu	37	2	120918514	120918514	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	120918514	120918514	G	T	SNP	EPB41L5	NM_020909	human	genbank	57_37b	+1	provisional	missense	c.1851	p.M617I	0.000	NULL	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_FA	-	no_errors
FHDC1	85462	genome.wustl.edu	37	4	153893569	153893570	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	153893569	153893570	AA	-	DEL	FHDC1	NM_033393	human	genbank	57_37b	+1	validated	frame_shift_del	c.1259_1260	p.Q420fs	0.105:0.098	superfamily_FH2_actin_bd,HMMSmart_FH2,HMMPfam_FH2	superfamily_FH2_actin_bd,HMMSmart_FH2,HMMPfam_FH2	(deletion:cds_exon[153893529,153893693])	no_errors
FHDC1	85462	genome.wustl.edu	37	4	153893569	153893570	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	153893569	153893570	AA	-	DEL	FHDC1	NM_033393	human	genbank	57_37b	+1	validated	frame_shift_del	c.1259_1260	p.Q420fs	0.105:0.098	superfamily_FH2_actin_bd,HMMSmart_FH2,HMMPfam_FH2	superfamily_FH2_actin_bd,HMMSmart_FH2,HMMPfam_FH2	(deletion:cds_exon[153893529,153893693])	no_errors
GATA3	2625	genome.wustl.edu	37	10	8115941	8115942	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115941	8115942	-	T	INS	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1290_1291	p.G431fs	1.000:1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors
GPR107	57720	genome.wustl.edu	37	9	132863474	132863474	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	132863474	132863474	A	T	SNP	GPR107	NM_001136557	human	genbank	57_37b	+1	validated	missense	c.1103	p.K368M	1.000	HMMPfam_Lung_7-TM_R	HMMPfam_Lung_7-TM_R	-	no_errors
GRID1	2894	genome.wustl.edu	37	10	87898775	87898775	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	87898775	87898775	C	T	SNP	GRID1	NM_017551	human	genbank	57_37b	-1	reviewed	missense	c.527	p.R176H	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors
HEATR7B2	133558	genome.wustl.edu	37	5	41058279	41058279	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	41058279	41058279	C	T	SNP	HEATR7B2	NM_173489	human	genbank	57_37b	-1	validated	silent	c.642	p.G214	0.998	NULL	superfamily_ARM repeat	-	no_errors
ILF2	3608	genome.wustl.edu	37	1	153635021	153635021	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153635021	153635021	C	A	SNP	ILF2	NM_004515	human	genbank	57_37b	-1	reviewed	nonsense	c.1024	p.E342*	1.000	NULL	superfamily_Nucleotidyltransferase,HMMSmart_SM00572,HMMPfam_DZF	-	no_errors
ILF2	3608	genome.wustl.edu	37	1	153635021	153635021	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153635021	153635021	C	A	SNP	ILF2	NM_004515	human	genbank	57_37b	-1	reviewed	nonsense	c.1024	p.E342*	1.000	NULL	superfamily_Nucleotidyltransferase,HMMSmart_SM00572,HMMPfam_DZF	-	no_errors
ITGB7	3695	genome.wustl.edu	37	12	53587622	53587622	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53587622	53587622	G	T	SNP	ITGB7	NM_000889	human	genbank	57_37b	-1	provisional	silent	c.1372	p.R458	1.000	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains	HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like,superfamily_Integrin domains,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_INTEGRIN_BETA,HMMPfam_EGF_2,PatternScan_EGF_2,PatternScan_4FE4S_FER_1,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors
KCNK15	60598	genome.wustl.edu	37	20	43374770	43374770	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	43374770	43374770	C	T	SNP	KCNK15	NM_022358	human	genbank	57_37b	+1	reviewed	silent	c.219	p.R73	1.000	NULL	HMMPfam_Ion_trans_2,superfamily_SSF81324	-	no_errors
KIAA1524	57650	genome.wustl.edu	37	3	108287044	108287044	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	108287044	108287044	T	A	SNP	KIAA1524	NM_020890	human	genbank	57_37b	-1	validated	nonsense	c.1231	p.K411*	1.000	NULL	superfamily_ARM repeat	-	no_errors
KIAA1524	57650	genome.wustl.edu	37	3	108287044	108287044	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	108287044	108287044	T	A	SNP	KIAA1524	NM_020890	human	genbank	57_37b	-1	validated	nonsense	c.1231	p.K411*	1.000	NULL	superfamily_ARM repeat	-	no_errors
KIF1C	10749	genome.wustl.edu	37	17	4906970	4906970	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4906970	4906970	G	A	SNP	KIF1C	NM_006612	human	genbank	57_37b	+1	provisional	missense	c.784	p.G262S	1.000	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD_FHA,HMMSmart_FHA,HMMPfam_FHA	-	no_errors
LIX1	167410	genome.wustl.edu	37	5	96430596	96430596	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	96430596	96430596	G	T	SNP	LIX1	NM_153234	human	genbank	57_37b	-1	validated	silent	c.705	p.A235	1.000	NULL	PatternScan_IF	-	no_errors
LOC100129376	0	genome.wustl.edu	37	1	221055680	221055680	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	221055680	221055680	C	T	SNP	LOC100129376	XM_001714926	human	genbank	57_37b	-1	model	splice_site	c.89+1	e1+1	1.000	-	-	-	no_errors
LOC645954	645954	genome.wustl.edu	37	10	30978206	30978206	+	RNA	SNP	G	G	C	rs71492600	byCluster	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	30978206	30978206	G	C	SNP	LOC645954	XR_017086	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.998	-	-	-	
LONRF2	164832	genome.wustl.edu	37	2	100903408	100903408	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	100903408	100903408	C	A	SNP	LONRF2	NM_198461	human	genbank	57_37b	-1	validated	missense	c.2038	p.G680W	1.000	HMMPfam_LON,HMMSmart_SM00464	superfamily_TPR-like,superfamily_RING/U-box,HMMSmart_SM00184,HMMSmart_SM00028,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_LON,HMMSmart_SM00464	-	no_errors
LRP2	4036	genome.wustl.edu	37	2	170022539	170022539	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170022539	170022539	G	T	SNP	LRP2	NM_004525	human	genbank	57_37b	-1	reviewed	missense	c.11661	p.N3887K	0.017	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_2,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,superfamily_SSF57196,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1	-	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65266724	65266726	+	RNA	DEL	AGA	AGA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65266724	65266726	AGA	-	DEL	MALAT1	NR_002819	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.473:0.552:0.384	-	-	(deletion:rna[65265233,65273940])	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65266724	65266726	+	RNA	DEL	AGA	AGA	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65266724	65266726	AGA	-	DEL	MALAT1	NR_002819	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.473:0.552:0.384	-	-	(deletion:rna[65265233,65273940])	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65268913	65268914	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65268913	65268914	-	A	INS	MALAT1	ENST00000433007	human	ensembl	57_37b	+1	known	frame_shift_ins	c.141_142	p.Y47fs	0.941:0.589	NULL	NULL	-	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65271704	65271705	+	RNA	DEL	TT	TT	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65271704	65271705	TT	-	DEL	MALAT1	NR_002819	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.889:0.645	-	-	(deletion:rna[65265233,65273940])	no_errors
MALAT1	378938	genome.wustl.edu	37	11	65271704	65271705	+	RNA	DEL	TT	TT	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65271704	65271705	TT	-	DEL	MALAT1	NR_002819	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.889:0.645	-	-	(deletion:rna[65265233,65273940])	no_errors
METTL2B	55798	genome.wustl.edu	37	7	128119302	128119302	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128119302	128119302	C	G	SNP	METTL2B	NM_018396	human	genbank	57_37b	+1	reviewed	missense	c.293	p.T98S	0.991	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors
MIR16-1	0	genome.wustl.edu	37	13	50623160	50623160	+	RNA	SNP	T	T	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	50623160	50623160	T	G	SNP	MIR16-1	ENST00000385271	human	ensembl	57_37b	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MPHOSPH9	10198	genome.wustl.edu	37	12	123687511	123687511	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	123687511	123687511	C	G	SNP	MPHOSPH9	NM_022782	human	genbank	57_37b	-1	validated	missense	c.985	p.E329Q	0.977	NULL	NULL	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9091401	9091401	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9091401	9091401	T	C	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	silent	c.414	p.G138	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
NGFR	4804	genome.wustl.edu	37	17	47589366	47589366	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47589366	47589366	C	T	SNP	NGFR	NM_002507	human	genbank	57_37b	+1	reviewed	nonsense	c.934	p.Q312*	1.000	NULL	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,PatternScan_EGF_2,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors
NGFR	4804	genome.wustl.edu	37	17	47589366	47589366	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47589366	47589366	C	T	SNP	NGFR	NM_002507	human	genbank	57_37b	+1	reviewed	nonsense	c.934	p.Q312*	1.000	NULL	superfamily_TNF receptor-like,HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,PatternScan_EGF_2,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors
NRP2	8828	genome.wustl.edu	37	2	206617652	206617652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	206617652	206617652	G	A	SNP	NRP2	NM_201266	human	genbank	57_37b	+1	reviewed	missense	c.1997	p.R666Q	0.002	HMMSmart_SM00137,HMMPfam_MAM	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00137,HMMPfam_MAM	-	no_errors
NSL1	25936	genome.wustl.edu	37	1	212911824	212911824	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	212911824	212911824	T	C	SNP	NSL1	NM_015471	human	genbank	57_37b	-1	reviewed	missense	c.772	p.R258G	0.990	NULL	PatternScan_N6_MTASE,HMMPfam_Mis14	-	no_errors
ODAM	54959	genome.wustl.edu	37	4	71062264	71062264	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71062264	71062264	A	G	SNP	ODAM	NM_017855	human	genbank	57_37b	+1	validated	missense	c.4	p.K2E	0.909	NULL	NULL	-	no_errors
OLFML3	56944	genome.wustl.edu	37	1	114523891	114523891	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114523891	114523891	C	G	SNP	OLFML3	NM_020190	human	genbank	57_37b	+1	validated	missense	c.721	p.L241V	1.000	HMMPfam_OLF,HMMSmart_SM00284	HMMPfam_OLF,HMMSmart_SM00284	-	no_errors
P2RY1	5028	genome.wustl.edu	37	3	152554217	152554217	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	152554217	152554217	A	T	SNP	P2RY1	NM_002563	human	genbank	57_37b	+1	reviewed	missense	c.646	p.I216F	0.995	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PCDHB18	54660	genome.wustl.edu	37	5	140616393	140616393	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140616393	140616393	C	T	SNP	PCDHB18	ENST00000274705	human	ensembl	57_37b	+1	known	missense	c.2108	p.T703M	0.067	NULL	HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors
PES1	23481	genome.wustl.edu	37	22	30975882	30975882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	30975882	30975882	C	T	SNP	PES1	NM_014303	human	genbank	57_37b	-1	reviewed	missense	c.1210	p.A404T	1.000	superfamily_BRCT domain,HMMSmart_SM00292	HMMPfam_Pescadillo_N,HMMPfam_BRCT,superfamily_BRCT domain,HMMSmart_SM00292	-	no_errors
PHTF2	57157	genome.wustl.edu	37	7	77469618	77469619	+	Splice_Site	INS	-	-	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77469618	77469619	-	T	INS	PHTF2	NM_001127357	human	genbank	57_37b	+1	validated	splice_site_ins	c.45+1_45+1	e1+1	1.000:1.000	-	-	-	no_errors
PI4K2B	55300	genome.wustl.edu	37	4	25258269	25258269	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	25258269	25258269	G	C	SNP	PI4K2B	NM_018323	human	genbank	57_37b	+1	validated	missense	c.729	p.K243N	1.000	HMMPfam_PI3_PI4_kinase	PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_PI3_PI4_kinase	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178927980	178927980	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178927980	178927980	T	C	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1258	p.C420R	1.000	HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PKD1L1	168507	genome.wustl.edu	37	7	47847972	47847972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	47847972	47847972	C	T	SNP	PKD1L1	NM_138295	human	genbank	57_37b	-1	reviewed	missense	c.7700	p.G2567E	0.085	HMMPfam_PKD_channel	HMMSmart_SM00089,superfamily_PKD domain,HMMPfam_PKD,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_PKD_channel	-	no_errors
PKN2	5586	genome.wustl.edu	37	1	89298781	89298781	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	89298781	89298781	C	T	SNP	PKN2	NM_006256	human	genbank	57_37b	+1	validated	missense	c.2692	p.R898W	0.985	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_PKN_effector,HMMSmart_Hr1,HMMPfam_HR1,superfamily_C2_CaLB,HMMSmart_C2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors
POL3S	339105	genome.wustl.edu	37	16	31098970	31098971	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31098970	31098971	CT	-	DEL	POL3S	NM_001039503	human	genbank	57_37b	-1	validated	frame_shift_del	c.130_129	p.V44fs	0.000:0.000	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	(deletion:cds_exon[31098858,31099020])	no_errors
POL3S	339105	genome.wustl.edu	37	16	31098970	31098971	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31098970	31098971	CT	-	DEL	POL3S	NM_001039503	human	genbank	57_37b	-1	validated	frame_shift_del	c.130_129	p.V44fs	0.000:0.000	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	(deletion:cds_exon[31098858,31099020])	no_errors
POP1	10940	genome.wustl.edu	37	8	99135672	99135672	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	99135672	99135672	G	C	SNP	POP1	NM_015029	human	genbank	57_37b	+1	reviewed	missense	c.107	p.S36T	0.364	NULL	HMMPfam_POP1,HMMPfam_POPLD	-	no_errors
PRKD2	25865	genome.wustl.edu	37	19	47181714	47181714	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	47181714	47181714	G	C	SNP	PRKD2	NM_001079880	human	genbank	57_37b	-1	reviewed	missense	c.2277	p.D759E	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
PSEN2	5664	genome.wustl.edu	37	1	227076718	227076718	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	227076718	227076718	C	T	SNP	PSEN2	NM_000447	human	genbank	57_37b	+1	reviewed	missense	c.755	p.A252V	1.000	HMMPfam_Presenilin,HMMSmart_SM00730	HMMPfam_Presenilin,HMMSmart_SM00730	-	no_errors
PTPN12	5782	genome.wustl.edu	37	7	77256423	77256423	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77256423	77256423	C	G	SNP	PTPN12	NM_002835	human	genbank	57_37b	+1	reviewed	missense	c.1427	p.S476C	0.000	NULL	superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
PWP2	5822	genome.wustl.edu	37	21	45540528	45540528	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	45540528	45540528	A	T	SNP	PWP2	NM_005049	human	genbank	57_37b	+1	validated	missense	c.1354	p.T452S	1.000	superfamily_WD40_like,HMMSmart_WD40	superfamily_Peptidase_S9A_N,HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_PWP2	-	no_errors
RNF214	257160	genome.wustl.edu	37	11	117152922	117152922	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	117152922	117152922	C	A	SNP	RNF214	NM_001077239	human	genbank	57_37b	+1	validated	missense	c.1648	p.Q550K	1.000	NULL	superfamily_RING/U-box	-	no_errors
RPRD1B	58490	genome.wustl.edu	37	20	36676792	36676792	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	36676792	36676792	G	A	SNP	RPRD1B	NM_021215	human	genbank	57_37b	+1	validated	silent	c.324	p.L108	1.000	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	-	no_errors
SCFD1	23256	genome.wustl.edu	37	14	31119774	31119774	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	31119774	31119774	C	A	SNP	SCFD1	NM_016106	human	genbank	57_37b	+1	validated	missense	c.673	p.L225I	1.000	superfamily_Sec1-like,HMMPfam_Sec1	superfamily_Sec1-like,HMMPfam_Sec1	-	no_errors
SEC16A	9919	genome.wustl.edu	37	9	139357554	139357554	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139357554	139357554	G	T	SNP	SEC16A	NM_014866	human	genbank	57_37b	-1	validated	missense	c.4678	p.L1560M	0.015	NULL	NULL	-	no_errors
SLC25A16	8034	genome.wustl.edu	37	10	70243321	70243321	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70243321	70243321	A	C	SNP	SLC25A16	NM_152707	human	genbank	57_37b	-1	reviewed	nonsense	c.867	p.Y289*	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC25A16	8034	genome.wustl.edu	37	10	70243321	70243321	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70243321	70243321	A	C	SNP	SLC25A16	NM_152707	human	genbank	57_37b	-1	reviewed	nonsense	c.867	p.Y289*	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC26A9	115019	genome.wustl.edu	37	1	205897041	205897041	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-11A-13W-A100-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205897041	205897041	C	G	SNP	SLC26A9	NM_134325	human	genbank	57_37b	-1	reviewed	missense	c.1090	p.D364H	1.000	HMMPfam_Sulfate_transp	HMMPfam_Sulfate_transp,superfamily_STAS,HMMPfam_STAS	-	no_errors
SLK	9748	genome.wustl.edu	37	10	105762296	105762296	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105762296	105762296	A	T	SNP	SLK	NM_014720	human	genbank	57_37b	+1	provisional	missense	c.1360	p.N454Y	0.002	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
SPATA21	374955	genome.wustl.edu	37	1	16735620	16735620	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16735620	16735620	T	C	SNP	SPATA21	NM_198546	human	genbank	57_37b	-1	provisional	silent	c.666	p.Q222	0.951	superfamily_SSF47473	superfamily_SSF47473,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
SPHKAP	80309	genome.wustl.edu	37	2	228881884	228881884	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	228881884	228881884	C	T	SNP	SPHKAP	NM_001142644	human	genbank	57_37b	-1	validated	missense	c.3686	p.R1229Q	0.953	NULL	HMMPfam_AKAP_110	-	no_errors
SPRED3	399473	genome.wustl.edu	37	19	38882594	38882594	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38882594	38882594	G	T	SNP	SPRED3	NM_001042522	human	genbank	57_37b	+1	validated	missense	c.186	p.L62F	1.000	HMMPfam_WH1,superfamily_SSF50729	HMMPfam_WH1,superfamily_SSF50729,HMMPfam_Sprouty	-	no_errors
SRRM2	23524	genome.wustl.edu	37	16	2817327	2817327	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2817327	2817327	G	A	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	silent	c.6798	p.A2266	1.000	NULL	HMMPfam_cwf21	-	no_errors
STRN3	29966	genome.wustl.edu	37	14	31381224	31381224	+	Silent	SNP	A	A	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	31381224	31381224	A	C	SNP	STRN3	NM_001083893	human	genbank	57_37b	-1	validated	silent	c.1539	p.V513	1.000	superfamily_WD40 repeat-like	HMMPfam_Striatin,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
TATDN1	83940	genome.wustl.edu	37	8	125528004	125528004	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	125528004	125528004	G	T	SNP	TATDN1	NM_032026	human	genbank	57_37b	-1	validated	silent	c.372	p.P124	0.991	superfamily_Metallo-dependent hydrolases,HMMPfam_TatD_DNase	superfamily_Metallo-dependent hydrolases,HMMPfam_TatD_DNase,PatternScan_TATD_3	-	no_errors
TMEM167B	56900	genome.wustl.edu	37	1	109637064	109637064	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109637064	109637064	T	G	SNP	TMEM167B	NM_020141	human	genbank	57_37b	+1	provisional	missense	c.168	p.H56Q	1.000	NULL	HMMPfam_DUF1242	-	no_errors
TNR	7143	genome.wustl.edu	37	1	175334374	175334374	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	175334374	175334374	A	G	SNP	TNR	NM_003285	human	genbank	57_37b	-1	validated	missense	c.2359	p.S787P	1.000	HMMSmart_SM00060,HMMPfam_fn3	PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
TRPM7	54822	genome.wustl.edu	37	15	50884259	50884259	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	50884259	50884259	T	C	SNP	TRPM7	NM_017672	human	genbank	57_37b	-1	validated	missense	c.4173	p.I1391M	1.000	NULL	HMMPfam_Ion_trans,superfamily_Kinase_like,HMMSmart_Alpha_kinase,HMMPfam_Alpha_kinase	-	no_errors
ZBTB24	9841	genome.wustl.edu	37	6	109787472	109787472	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	109787472	109787472	G	T	SNP	ZBTB24	NM_014797	human	genbank	57_37b	-1	validated	missense	c.1676	p.S559Y	0.997	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_AT_hook,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZFYVE16	9765	genome.wustl.edu	37	5	79734566	79734566	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DK-01A-21W-A071-09	TCGA-BH-A0DK-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	79734566	79734566	A	C	SNP	ZFYVE16	NM_001105251	human	genbank	57_37b	+1	validated	missense	c.2062	p.T688P	0.000	NULL	HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors
