Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ACE	1636	genome.wustl.edu	37	17	61557164	61557164	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61557164	61557164	C	-	DEL	ACE	NM_000789	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.546	p.Y182fs	0.117	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain,PatternScan_ZINC_PROTEASE"	(deletion:cds_exon[61557130,61557273])	no_errors
ACE	1636	genome.wustl.edu	37	17	61557164	61557164	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61557164	61557164	C	-	DEL	ACE	NM_000789	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.546	p.Y182fs	0.117	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain,PatternScan_ZINC_PROTEASE"	(deletion:cds_exon[61557130,61557273])	no_errors
ALK	238	genome.wustl.edu	37	2	29432665	29432665	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	29432665	29432665	G	A	SNP	ALK	NM_004304	human	genbank	57_37b	-1	reviewed	nonsense	c.3823	p.R1275*	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_LDL receptor-like module,HMMSmart_SM00192,HMMPfam_MAM,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
ALK	238	genome.wustl.edu	37	2	29432665	29432665	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	29432665	29432665	G	A	SNP	ALK	NM_004304	human	genbank	57_37b	-1	reviewed	nonsense	c.3823	p.R1275*	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_LDL receptor-like module,HMMSmart_SM00192,HMMPfam_MAM,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
ARSB	411	genome.wustl.edu	37	5	78181573	78181573	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	78181573	78181573	C	T	SNP	ARSB	NM_000046	human	genbank	57_37b	-1	reviewed	missense	c.976	p.V326I	0.000	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors
C10orf140	387640	genome.wustl.edu	37	10	21805245	21805245	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	21805245	21805245	C	G	SNP	C10orf140	NM_207371	human	genbank	57_37b	-1	validated	missense	c.1507	p.G503R	0.996	NULL	superfamily_Putative DNA-binding domain,HMMPfam_Ski_Sno,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
C10orf72	196740	genome.wustl.edu	37	10	50285301	50285301	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50285301	50285301	G	C	SNP	C10orf72	NM_001031746	human	genbank	57_37b	-1	validated	missense	c.597	p.I199M	0.152	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors
C1orf122	127687	genome.wustl.edu	37	1	38274781	38274781	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	38274781	38274781	C	A	SNP	C1orf122	ENST00000446260	human	ensembl	57_37b	+1	known	missense	c.364	p.P122T	0.997	NULL	NULL	-	no_errors
DAPK1	1612	genome.wustl.edu	37	9	90321914	90321914	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	90321914	90321914	C	T	SNP	DAPK1	NM_004938	human	genbank	57_37b	+1	reviewed	missense	c.3928	p.R1310W	0.999	superfamily_DEATH_like,HMMSmart_DEATH	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SSF52540,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors
DPAGT1	1798	genome.wustl.edu	37	11	118967995	118967995	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	118967995	118967995	G	A	SNP	DPAGT1	NM_001382	human	genbank	57_37b	-1	reviewed	missense	c.1018	p.L340F	0.885	NULL	HMMPfam_Glycos_transf_4	-	no_errors
ENSG00000247765	0	genome.wustl.edu	37	15	21941667	21941667	+	RNA	SNP	T	T	C	rs1976798	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21941667	21941667	T	C	SNP	ENSG00000247765	ENST00000500487	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.001	-	-	-	
EPRS	2058	genome.wustl.edu	37	1	220162120	220162121	+	In_Frame_Ins	INS	-	-	ATC	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220162120	220162121	-	ATC	INS	EPRS	NM_004446	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.2587_2586	p.862in_frame_insD	1.000:0.995	superfamily_S15/NS1_bind,HMMPfam_WHEP-TRS	superfamily_GST_C_like,superfamily_SSF52374,HMMPfam_tRNA-synt_1c,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_tRNA-synt_1c_C,superfamily_Ribosomal_L25rel,superfamily_S15/NS1_bind,HMMPfam_WHEP-TRS,PatternScan_WHEP_TRS_1,superfamily_SSF55681,HMMPfam_tRNA-synt_2b,superfamily_Anticodon_bd,HMMPfam_HGTP_anticodon,superfamily_Pro-tRNA_synth_II_C,HMMPfam_ProRS-C_1	-	no_errors
FGD2	221472	genome.wustl.edu	37	6	36976680	36976680	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36976680	36976680	G	A	SNP	FGD2	NM_173558	human	genbank	57_37b	+1	validated	missense	c.139	p.E47K	0.000	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors
HSN2	378465	genome.wustl.edu	37	12	977147	977147	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	977147	977147	C	G	SNP	HSN2	NM_213655	human	genbank	57_37b	+1	reviewed	missense	c.152	p.P51R	1.000	NULL	NULL	-	no_errors
HYDIN	54768	genome.wustl.edu	37	16	70916787	70916787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70916787	70916787	C	T	SNP	HYDIN	NM_032821	human	genbank	57_37b	-1	validated	missense	c.9988	p.E3330K	0.980	NULL	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LAMA1	284217	genome.wustl.edu	37	18	7050726	7050726	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7050726	7050726	A	C	SNP	LAMA1	NM_005559	human	genbank	57_37b	-1	validated	nonsense	c.555	p.Y185*	0.998	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMSmart_SM00281,HMMPfam_Laminin_B,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMSmart_SM00282,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors
LAMA1	284217	genome.wustl.edu	37	18	7050726	7050726	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7050726	7050726	A	C	SNP	LAMA1	NM_005559	human	genbank	57_37b	-1	validated	nonsense	c.555	p.Y185*	0.998	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMSmart_SM00281,HMMPfam_Laminin_B,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMSmart_SM00282,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors
LOC645954	645954	genome.wustl.edu	37	10	30998304	30998304	+	RNA	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	30998304	30998304	G	A	SNP	LOC645954	XR_017086	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.858	-	-	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100683830	100683830	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100683830	100683830	A	T	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	missense	c.9133	p.S3045C	0.003	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MXRA5	25878	genome.wustl.edu	37	X	3238686	3238686	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	3238686	3238686	T	G	SNP	MXRA5	NM_015419	human	genbank	57_37b	-1	validated	missense	c.5040	p.K1680N	0.000	NULL	HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set	-	no_errors
MXRA5	25878	genome.wustl.edu	37	X	3239606	3239606	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	3239606	3239606	A	T	SNP	MXRA5	NM_015419	human	genbank	57_37b	-1	validated	missense	c.4120	p.F1374I	0.000	NULL	HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
NEB	4703	genome.wustl.edu	37	2	152501038	152501038	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	152501038	152501038	G	A	SNP	NEB	NM_004543	human	genbank	57_37b	-1	reviewed	missense	c.7588	p.P2530S	0.992	HMMSmart_SM00227	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
ODZ4	26011	genome.wustl.edu	37	11	78437179	78437179	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	78437179	78437179	C	A	SNP	ODZ4	NM_001098816	human	genbank	57_37b	-1	validated	silent	c.3495	p.A1165	0.971	NULL	HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_EGF,HMMPfam_EGF_2,superfamily_SSF57196,superfamily_SSF101898,superfamily_TolB_C,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors
RABGAP1	23637	genome.wustl.edu	37	9	125746848	125746848	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	125746848	125746848	G	T	SNP	RABGAP1	NM_012197	human	genbank	57_37b	+1	validated	nonsense	c.235	p.E79*	1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors
RABGAP1	23637	genome.wustl.edu	37	9	125746848	125746848	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	125746848	125746848	G	T	SNP	RABGAP1	NM_012197	human	genbank	57_37b	+1	validated	nonsense	c.235	p.E79*	1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors
RHOA	387	genome.wustl.edu	37	3	49413010	49413010	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49413010	49413010	G	A	SNP	RHOA	NM_001664	human	genbank	57_37b	-1	validated	missense	c.13	p.R5W	0.997	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Ras,HMMSmart_SM00173,HMMSmart_SM00175,HMMSmart_SM00174	-	no_errors
RPTN	126638	genome.wustl.edu	37	1	152128599	152128599	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152128599	152128599	C	A	SNP	RPTN	NM_001122965	human	genbank	57_37b	-1	validated	missense	c.976	p.G326C	0.001	NULL	superfamily_EF-hand,HMMPfam_S_100,HMMPfam_efhand,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors
SCN11A	11280	genome.wustl.edu	37	3	38941399	38941399	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38941399	38941399	G	A	SNP	SCN11A	NM_014139	human	genbank	57_37b	-1	validated	missense	c.2008	p.R670C	0.239	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors
SCN8A	6334	genome.wustl.edu	37	12	52139700	52139700	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	52139700	52139700	T	G	SNP	SCN8A	NM_014191	human	genbank	57_37b	+1	validated	missense	c.2012	p.V671G	0.998	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,PatternScan_ODR_DC_2_1,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors
SDK1	221935	genome.wustl.edu	37	7	4285428	4285428	+	Silent	SNP	A	A	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	4285428	4285428	A	C	SNP	SDK1	NM_152744	human	genbank	57_37b	+1	validated	silent	c.6372	p.S2124	0.002	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
SLC16A2	6567	genome.wustl.edu	37	X	73744298	73744298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	73744298	73744298	G	A	SNP	SLC16A2	NM_006517	human	genbank	57_37b	+1	reviewed	missense	c.902	p.R301H	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
SNTG2	54221	genome.wustl.edu	37	2	1204905	1204905	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	1204905	1204905	G	A	SNP	SNTG2	NM_018968	human	genbank	57_37b	+1	reviewed	silent	c.708	p.T236	0.975	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
SYNE1	23345	genome.wustl.edu	37	6	152472809	152472809	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	152472809	152472809	C	T	SNP	SYNE1	NM_182961	human	genbank	57_37b	-1	reviewed	missense	c.24329	p.R8110H	1.000	HMMPfam_Spectrin,superfamily_Spectrin repeat	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors
TNFRSF21	27242	genome.wustl.edu	37	6	47221133	47221133	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	47221133	47221133	G	A	SNP	TNFRSF21	NM_014452	human	genbank	57_37b	-1	reviewed	silent	c.1368	p.H456	0.233	HMMSmart_DEATH,superfamily_DEATH_like,HMMPfam_Death	superfamily_SSF57586,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,HMMSmart_DEATH,superfamily_DEATH_like,HMMPfam_Death	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578406	7578406	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.524	p.R175H	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	
TUBGCP2	10844	genome.wustl.edu	37	10	135106688	135106688	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-11A-13W-A10F-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	135106688	135106688	C	T	SNP	TUBGCP2	NM_006659	human	genbank	57_37b	-1	validated	silent	c.879	p.A293	0.273	HMMPfam_Spc97_Spc98	HMMPfam_Spc97_Spc98	-	no_errors
TUFM	7284	genome.wustl.edu	37	16	28855746	28855746	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28855746	28855746	C	T	SNP	TUFM	NM_003321	human	genbank	57_37b	-1	reviewed	missense	c.811	p.V271I	0.732	superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Translation proteins	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translation proteins,HMMPfam_GTP_EFTU_D2,HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	-	no_errors
WAC	51322	genome.wustl.edu	37	10	28905131	28905131	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	28905131	28905131	A	G	SNP	WAC	NM_016628	human	genbank	57_37b	+1	reviewed	missense	c.1586	p.N529S	1.000	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors
ZNF470	388566	genome.wustl.edu	37	19	57089741	57089741	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57089741	57089741	T	C	SNP	ZNF470	NM_001001668	human	genbank	57_37b	+1	validated	silent	c.1944	p.P648	0.960	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF516	9658	genome.wustl.edu	37	18	74091656	74091656	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	74091656	74091656	C	A	SNP	ZNF516	ENST00000443185	human	ensembl	57_37b	-1	known	missense	c.2414	p.S805I	0.082	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF548	147694	genome.wustl.edu	37	19	57910907	57910907	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57910907	57910907	G	C	SNP	ZNF548	NM_152909	human	genbank	57_37b	+1	validated	missense	c.1252	p.E418Q	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF808	388558	genome.wustl.edu	37	19	53056786	53056786	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0E0-01A-11W-A071-09	TCGA-BH-A0E0-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53056786	53056786	A	G	SNP	ZNF808	NM_001039886	human	genbank	57_37b	+1	validated	missense	c.617	p.N206S	0.545	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
