Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCC8	6833	genome.wustl.edu	37	11	17418752	17418752	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	17418752	17418752	C	T	SNP	ABCC8	NM_000352	human	genbank	57_37b	-1	reviewed	missense	c.3976	p.E1326K	1.000	NULL	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ALDH1L1	10840	genome.wustl.edu	37	3	125828868	125828868	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	125828868	125828868	C	A	SNP	ALDH1L1	NM_012190	human	genbank	57_37b	-1	reviewed	missense	c.2266	p.V756L	0.000	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh	PatternScan_PHOSPHOPANTETHEINE,HMMPfam_Formyl_trans_N,superfamily_formyl_transf,PatternScan_GART,superfamily_FMT_C_like,HMMPfam_Formyl_trans_C,superfamily_ACP_like,superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors
ATP2A2	488	genome.wustl.edu	37	12	110781179	110781179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	110781179	110781179	C	T	SNP	ATP2A2	NM_170665	human	genbank	57_37b	+1	reviewed	missense	c.2461	p.R821W	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_C	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_HAD-like,HMMPfam_Cation_ATPase_C	-	no_errors
ATXN7L1	222255	genome.wustl.edu	37	7	105255024	105255024	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	105255024	105255024	T	A	SNP	ATXN7L1	NM_020725	human	genbank	57_37b	-1	validated	missense	c.1757	p.H586L	1.000	NULL	HMMPfam_SCA7	-	no_errors
B4GALT1	2683	genome.wustl.edu	37	9	33135287	33135287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33135287	33135287	G	A	SNP	B4GALT1	NM_001497	human	genbank	57_37b	-1	reviewed	missense	c.548	p.P183L	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Galactosyl_T_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Galactosyl_T_2	-	no_errors
CELSR3	1951	genome.wustl.edu	37	3	48699138	48699138	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48699138	48699138	C	T	SNP	CELSR3	NM_001407	human	genbank	57_37b	-1	reviewed	silent	c.930	p.A310	0.000	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ASX_HYDROXYL,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
CKS1BP6	0	genome.wustl.edu	37	X	30635657	30635657	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	30635657	30635657	C	T	SNP	CKS1BP6	ENST00000378958	human	ensembl	57_37b	+1	known	silent	c.87	p.A29	0.998	superfamily_Cyc_dep_kin_rsub,HMMPfam_CKS	superfamily_Cyc_dep_kin_rsub,HMMPfam_CKS,PatternScan_CKS_1,PatternScan_CKS_2	-	no_errors
CYP4A22	284541	genome.wustl.edu	37	1	47610236	47610236	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	47610236	47610236	C	T	SNP	CYP4A22	NM_001010969	human	genbank	57_37b	+1	reviewed	silent	c.912	p.S304	0.996	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DDX42	11325	genome.wustl.edu	37	17	61886223	61886223	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61886223	61886223	G	A	SNP	DDX42	NM_007372	human	genbank	57_37b	+1	reviewed	missense	c.1067	p.R356Q	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
DOCK2	1794	genome.wustl.edu	37	5	169098135	169098135	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	169098135	169098135	C	T	SNP	DOCK2	NM_004946	human	genbank	57_37b	+1	validated	missense	c.278	p.T93M	0.995	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Cytochrome c	-	no_errors
EIF4G3	8672	genome.wustl.edu	37	1	21167444	21167444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	21167444	21167444	G	A	SNP	EIF4G3	NM_003760	human	genbank	57_37b	-1	validated	silent	c.3798	p.T1266	1.000	HMMPfam_MA3,HMMSmart_SM00544	superfamily_ARM repeat,HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544,superfamily_PH domain-like,HMMSmart_SM00515,HMMPfam_W2	-	no_errors
EXOC6	54536	genome.wustl.edu	37	10	94653133	94653133	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	94653133	94653133	G	A	SNP	EXOC6	NM_019053	human	genbank	57_37b	+1	reviewed	silent	c.129	p.A43	0.994	NULL	HMMPfam_Sec15	-	no_errors
EXOC6B	23233	genome.wustl.edu	37	2	72406489	72406489	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	72406489	72406489	C	G	SNP	EXOC6B	NM_015189	human	genbank	57_37b	-1	validated	missense	c.2411	p.G804A	1.000	HMMPfam_Sec15	HMMPfam_Sec15	-	no_errors
GATA3	2625	genome.wustl.edu	37	10	8115874	8115875	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115874	8115875	-	G	INS	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1223_1224	p.P409fs	0.903:0.359	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors
HAPLN2	60484	genome.wustl.edu	37	1	156593871	156593872	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156593871	156593872	-	T	INS	HAPLN2	NM_021817	human	genbank	57_37b	+1	validated	frame_shift_ins	c.358_359	p.E121fs	1.000:1.000	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors
ITPKC	80271	genome.wustl.edu	37	19	41235234	41235234	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41235234	41235234	G	T	SNP	ITPKC	NM_025194	human	genbank	57_37b	+1	reviewed	silent	c.1383	p.L461	0.998	HMMPfam_IPK,superfamily_SSF56104	HMMPfam_IPK,superfamily_SSF56104	-	no_errors
ITSN1	6453	genome.wustl.edu	37	21	35183459	35183459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	35183459	35183459	G	A	SNP	ITSN1	NM_003024	human	genbank	57_37b	+1	reviewed	missense	c.2500	p.A834T	0.599	NULL	HMMSmart_SM00027,superfamily_EF-hand,HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
KIAA1614	57710	genome.wustl.edu	37	1	180904418	180904418	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	180904418	180904418	G	A	SNP	KIAA1614	NM_020950	human	genbank	57_37b	+1	validated	missense	c.1373	p.R458H	0.000	NULL	NULL	-	no_errors
KIF1A	547	genome.wustl.edu	37	2	241662889	241662889	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	241662889	241662889	T	A	SNP	KIF1A	NM_004321	human	genbank	57_37b	-1	reviewed	missense	c.4102	p.S1368C	0.998	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
KLK7	5650	genome.wustl.edu	37	19	51483714	51483714	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51483714	51483714	G	A	SNP	KLK7	NM_005046	human	genbank	57_37b	-1	reviewed	missense	c.251	p.T84M	0.000	HMMSmart_SM00020,HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases	HMMSmart_SM00020,HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
LGALS8	3964	genome.wustl.edu	37	1	236706922	236706924	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	AGG	AGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236706922	236706924	AGG	-	DEL	LGALS8	NM_006499	human	genbank	57_37b	+1	reviewed	in_frame_del	c.738_740	p.G247in_frame_del	1.000:1.000:1.000	superfamily_ConA_like_lec_gl,HMMSmart_GLECT,HMMPfam_Gal-bind_lectin	superfamily_ConA_like_lec_gl,HMMSmart_GLECT,HMMPfam_Gal-bind_lectin	(deletion:cds_exon[236706860,236706948])	no_errors
LOC100287684	0	genome.wustl.edu	37	9	6793146	6793146	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	6793146	6793146	G	A	SNP	LOC100287684	XM_002342904	human	genbank	57_37b	-1	model	nonsense	c.1027	p.R343*	0.069	NULL	NULL	-	no_errors
MOGAT3	346606	genome.wustl.edu	37	7	100839243	100839243	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100839243	100839243	C	A	SNP	MOGAT3	NM_178176	human	genbank	57_37b	-1	provisional	missense	c.1010	p.C337F	0.011	HMMPfam_DAGAT	HMMPfam_DAGAT	-	no_errors
NEUROG3	50674	genome.wustl.edu	37	10	71332756	71332756	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	71332756	71332756	C	G	SNP	NEUROG3	NM_020999	human	genbank	57_37b	-1	validated	missense	c.44	p.R15P	0.000	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors
NUDT8	254552	genome.wustl.edu	37	11	67396411	67396411	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67396411	67396411	C	-	DEL	NUDT8	NM_181843	human	genbank	57_37b	-1	provisional	frame_shift_del	c.306	p.L103fs	0.040	superfamily_NUDIX_hydrolase,HMMPfam_NUDIX	superfamily_NUDIX_hydrolase,HMMPfam_NUDIX	(deletion:cds_exon[67396390,67396522])	no_errors
NUP160	23279	genome.wustl.edu	37	11	47808045	47808045	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47808045	47808045	C	T	SNP	NUP160	NM_015231	human	genbank	57_37b	-1	validated	missense	c.3808	p.A1270T	1.000	NULL	PatternScan_HIS_ACID_PHOSPHAT_1	-	no_errors
PSAP	5660	genome.wustl.edu	37	10	73594255	73594255	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	73594255	73594255	G	A	SNP	PSAP	NM_001042465	human	genbank	57_37b	-1	reviewed	silent	c.48	p.A16	0.010	NULL	HMMPfam_SapA,HMMSmart_SAPA,superfamily_Saposin_like,HMMPfam_SapB_1,HMMSmart_SapB,HMMPfam_SapB_2	-	no_errors
PTMS	5763	genome.wustl.edu	37	12	6879111	6879111	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6879111	6879111	G	T	SNP	PTMS	NM_002824	human	genbank	57_37b	+1	validated	nonsense	c.142	p.E48*	1.000	HMMPfam_Prothymosin	HMMPfam_Prothymosin	-	no_errors
PTMS	5763	genome.wustl.edu	37	12	6879322	6879322	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6879322	6879322	G	C	SNP	PTMS	NM_002824	human	genbank	57_37b	+1	validated	splice_site	c.197-1	e4-1	1.000	-	-	-	no_errors
SPAG5	10615	genome.wustl.edu	37	17	26919888	26919888	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	26919888	26919888	T	A	SNP	SPAG5	NM_006461	human	genbank	57_37b	-1	reviewed	missense	c.374	p.Y125F	0.000	NULL	NULL	-	no_errors
SPTBN2	6712	genome.wustl.edu	37	11	66456618	66456618	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66456618	66456618	G	A	SNP	SPTBN2	NM_006946	human	genbank	57_37b	-1	reviewed	missense	c.5983	p.R1995C	1.000	HMMPfam_Spectrin,superfamily_Spectrin repeat,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
TBC1D4	9882	genome.wustl.edu	37	13	75933979	75933980	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	75933979	75933980	TC	-	DEL	TBC1D4	NM_014832	human	genbank	57_37b	-1	validated	frame_shift_del	c.1096_1095	p.E365fs	1.000:1.000	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	(deletion:cds_exon[75933905,75933994])	no_errors
TSHZ3	57616	genome.wustl.edu	37	19	31768945	31768945	+	Missense_Mutation	SNP	G	G	A	rs61747224	by1000genomes	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31768945	31768945	G	A	SNP	TSHZ3	NM_020856	human	genbank	57_37b	-1	validated	missense	c.1754	p.P585L	1.000	NULL	PatternScan_HOMEOBOX_1,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	
TTN	7273	genome.wustl.edu	37	2	179429426	179429426	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179429426	179429426	A	C	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.73723	p.F24575V	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
UBR7	55148	genome.wustl.edu	37	14	93686624	93686624	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	93686624	93686624	C	-	DEL	UBR7	NM_175748	human	genbank	57_37b	+1	validated	frame_shift_del	c.990	p.L331fs	1.000	NULL	PatternScan_ZF_PHD_1,HMMPfam_zf-UBR,HMMPfam_PHD,HMMSmart_PHD	(deletion:cds_exon[93686595,93686757])	no_errors
USP31	57478	genome.wustl.edu	37	16	23096260	23096260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	23096260	23096260	C	T	SNP	USP31	NM_020718	human	genbank	57_37b	-1	validated	missense	c.1751	p.R584H	1.000	superfamily_Cysteine proteinases,HMMPfam_UCH	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
ZBTB42	0	genome.wustl.edu	37	14	105268210	105268210	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105268210	105268210	G	A	SNP	ZBTB42	NM_001137601	human	genbank	57_37b	+1	validated	missense	c.676	p.E226K	0.992	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	-	no_errors
ZNF239	8187	genome.wustl.edu	37	10	44052732	44052732	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14T-01A-11D-A10Y-09	TCGA-E2-A14T-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	44052732	44052732	C	G	SNP	ZNF239	NM_001099282	human	genbank	57_37b	-1	validated	missense	c.796	p.D266H	0.426	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
