Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
GDAC_clinicalDataPicker1.stage2File	READ.clin.merged.txt	gdac.broadinstitute.org_READ.Merge_Clinical.Level_1.2013011600.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	READ.clin.merged.picked.txt	ClinicalPick	Level_4	text	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
GDAC_clinicalDataPicker1.stage2File	READ.clin.merged.txt	gdac.broadinstitute.org_READ.Merge_Clinical.Level_1.2013011600.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
GDAC_clinicalDataPicker1.stage2File	READ.clin.merged.txt	gdac.broadinstitute.org_READ.Merge_Clinical.Level_1.2013011600.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
GDAC_clinicalDataPicker1.selectFile	stage3_params_clin_read.tsv	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	READ.clin.merged.picked.txt	ClinicalPick	Level_4	text	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
GDAC_clinicalDataPicker1.selectFile	stage3_params_clin_read.tsv	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
GDAC_clinicalDataPicker1.selectFile	stage3_params_clin_read.tsv	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00313:60	Clinical_Pick_Tier1_2013011600	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_READ.Clinical_Pick_Tier1.Level_4.2013011600.0.0	yes
