| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/2330039/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_thca.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | THCA |
| Execution Times: | |
| Submitted: | 16:38:38 17-01-13 |
| Completed: | |
| Elapsed: | 03 hrs 21 mins 10 secs |
step 1. GDAC_clinicalDataPicker [id: 295167] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/2330039/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_thca.tsv |
| nodeColumn | 1 |
| outPrefix | THCA |
| Output Files: | |
| THCA.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:38:48 17-01-13 |
| Completed: | 18:26:47 17-01-13 |
| Elapsed: | 01 hrs 47 mins 59 secs |
step 2. GDAC_clinicalDataPickerReport [id: 295168] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | THCA.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 16:38:48 17-01-13 |
| Completed: | 19:59:46 17-01-13 |
| Elapsed: | 03 hrs 20 mins 58 secs |