| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/UCEC/2434977/0.GDAC_clinicalDataMerger.Finished/UCEC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_ucec.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | UCEC |
| Execution Times: | |
| Submitted: | 15:54:29 04-02-13 |
| Completed: | |
| Elapsed: | 01 hrs 40 mins 49 secs |
step 1. GDAC_clinicalDataPicker [id: 310707] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/UCEC/2434977/0.GDAC_clinicalDataMerger.Finished/UCEC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_ucec.tsv |
| nodeColumn | 1 |
| outPrefix | UCEC |
| Output Files: | |
| UCEC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 15:54:30 04-02-13 |
| Completed: | 16:54:51 04-02-13 |
| Elapsed: | 01 hrs 00 mins 21 secs |
step 2. GDAC_clinicalDataPickerReport [id: 310708] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | UCEC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 15:54:30 04-02-13 |
| Completed: | 17:35:15 04-02-13 |
| Elapsed: | 01 hrs 40 mins 45 secs |