| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/2586022/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_lihc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LIHC |
| Execution Times: | |
| Submitted: | 16:12:33 24-02-13 |
| Completed: | |
| Elapsed: | 09 hrs 53 mins 47 secs |
step 1. GDAC_clinicalDataPicker [id: 323057] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/2586022/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_lihc.tsv |
| nodeColumn | 1 |
| outPrefix | LIHC |
| Output Files: | |
| LIHC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 16:12:39 24-02-13 |
| Completed: | 17:23:27 24-02-13 |
| Elapsed: | 01 hrs 10 mins 47 secs |
step 2. GDAC_clinicalDataPickerReport [id: 323058] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | LIHC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 16:12:39 24-02-13 |
| Completed: | 02:06:19 25-02-13 |
| Elapsed: | 09 hrs 53 mins 39 secs |