Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCD4	5826	broad.mit.edu	37	14	74763003	74763003	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44040370	44040370	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35578619	35578619	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158406802	158406802	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33616058	33616058	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73434535	73434535	+	5'Flank	SNP	C	A	A	rs140084299	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64629840	64629840	+	Intron	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154558777	154558777	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK5	203054	broad.mit.edu	37	8	145617075	145617075	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFMID	125061	broad.mit.edu	37	17	76203055	76203055	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75487024	75487024	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86800113	86800113	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCY	191	broad.mit.edu	37	20	32878716	32878716	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62300103	62300103	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106968567	106968567	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91709110	91709110	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1A1	10327	broad.mit.edu	37	1	46034632	46034632	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B10	57016	broad.mit.edu	37	7	134225913	134225913	+	3'UTR	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73830395	73830395	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73830399	73830399	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73830528	73830528	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56202593	56202593	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEH	327	broad.mit.edu	37	3	49714867	49714867	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21229220	21229220	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93768298	93768298	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80872724	80872724	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30202271	30202271	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNSD1	54529	broad.mit.edu	37	2	190532355	190532355	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29220228	29220228	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108236107	108236107	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATN1	1822	broad.mit.edu	37	12	7051006	7051006	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25953269	25953269	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5H	10476	broad.mit.edu	37	17	73038614	73038614	+	Intron	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138432326	138432326	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B1	5205	broad.mit.edu	37	18	55342226	55342226	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41754461	41754461	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG3	9531	broad.mit.edu	37	10	121436825	121436825	+	3'UTR	SNP	C	A	A	rs116329258	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143570554	143570554	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAP1	8314	broad.mit.edu	37	3	52441235	52441235	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160295733	160295733	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56545113	56545113	+	Silent	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39922097	39922097	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39923701	39923701	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32491750	32491750	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15560313	15560313	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36952397	36952397	+	Silent	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55805731	55805731	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD12	84464	broad.mit.edu	37	16	3639148	3639148	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf101	79701	broad.mit.edu	37	17	80356141	80356141	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf54	162681	broad.mit.edu	37	18	51892104	51892104	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf43	25912	broad.mit.edu	37	1	154186503	154186503	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20208833	20208833	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf168	84553	broad.mit.edu	37	6	99739596	99739596	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40972681	40972681	+	Missense_Mutation	SNP	C	A	A	rs117487879	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86249329	86249329	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54961853	54961853	+	Intron	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110814095	110814095	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42702568	42702568	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARTPT	9607	broad.mit.edu	37	5	71016433	71016433	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2231838	2231838	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	122002536	122002536	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC151	115948	broad.mit.edu	37	19	11537169	11537169	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130900728	130900728	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCK	885	broad.mit.edu	37	3	42304857	42304857	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT4	10575	broad.mit.edu	37	2	62107648	62107648	+	Intron	DEL	T	-	-			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6A	908	broad.mit.edu	37	7	56130642	56130642	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD160	11126	broad.mit.edu	37	1	145699074	145699074	+	Silent	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227182576	227182576	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21947982	21947982	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60504711	60504711	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109793108	109793108	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48665944	48665944	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP120	153241	broad.mit.edu	37	5	122713082	122713082	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40045330	40045330	+	Silent	SNP	C	A	A	rs148956702	byFrequency	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85128007	85128007	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRH1A	84916	broad.mit.edu	37	16	69189674	69189674	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113504153	113504153	+	Splice_Site	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12B	387837	broad.mit.edu	37	12	10168296	10168296	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12B	387837	broad.mit.edu	37	12	10168364	10168364	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10213811	10213811	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27472186	27472186	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM2	146225	broad.mit.edu	37	16	66613979	66613979	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95363337	95363337	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135080442	135080442	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17298270	17298270	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33156669	33156669	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139609105	139609105	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109862533	109862533	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227895288	227895288	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48608081	48608081	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160309907	160309907	+	Intron	SNP	T	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COTL1	23406	broad.mit.edu	37	16	84623830	84623830	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148562468	148562468	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE1	8904	broad.mit.edu	37	20	34214296	34214296	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36669818	36669818	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC1	23373	broad.mit.edu	37	19	18888034	18888034	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSHL1	1444	broad.mit.edu	37	17	61988387	61988387	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4494829	4494829	+	Intron	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113649131	113649131	+	Silent	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG5	10675	broad.mit.edu	37	3	47604045	47604045	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16970128	16970128	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48976495	48976495	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110653330	110653330	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX12	440081	broad.mit.edu	37	12	9590596	9590596	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50121059	50121059	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46400701	46400701	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS3	9249	broad.mit.edu	37	1	12640591	12640591	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61541216	61541216	+	Silent	SNP	C	A	A	rs138828502		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLEC1	9940	broad.mit.edu	37	3	38105499	38105499	+	Intron	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124416362	124416362	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21856246	21856246	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21906171	21906171	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38825305	38825305	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11622639	11622639	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC14	85406	broad.mit.edu	37	12	56222359	56222359	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220239499	220239499	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98079094	98079094	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169098200	169098200	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK4	55715	broad.mit.edu	37	16	57507802	57507802	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35161143	35161143	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTL	51514	broad.mit.edu	37	1	212273851	212273851	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD2	285605	broad.mit.edu	37	5	118183901	118183901	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71778254	71778254	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB4B	84766	broad.mit.edu	37	12	3806150	3806150	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43976537	43976537	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT2	10919	broad.mit.edu	37	6	31857194	31857194	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40326492	40326492	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3E	3646	broad.mit.edu	37	8	109241351	109241351	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3M	10480	broad.mit.edu	37	11	32610067	32610067	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E	1977	broad.mit.edu	37	4	99802265	99802265	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G2	1982	broad.mit.edu	37	11	10827585	10827585	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN1	11117	broad.mit.edu	37	2	27306226	27306226	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMP2	2013	broad.mit.edu	37	16	10637349	10637349	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR2	30817	broad.mit.edu	37	19	14884715	14884715	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564781	142564781	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L2	64787	broad.mit.edu	37	11	727020	727020	+	3'UTR	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EREG	2069	broad.mit.edu	37	4	75250500	75250500	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23713904	23713904	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERO1LB	56605	broad.mit.edu	37	1	236383992	236383992	+	Intron	SNP	C	T	T	rs45566335		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFA	2108	broad.mit.edu	37	15	76551319	76551319	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11151076	11151076	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11159766	11159766	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108383265	108383265	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154213134	154213134	+	Intron	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM110B	90362	broad.mit.edu	37	8	59059695	59059695	+	Silent	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170627878	170627878	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220045342	220045342	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71212580	71212580	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169A	26049	broad.mit.edu	37	5	74137556	74137556	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM54A	113115	broad.mit.edu	37	6	136563884	136563884	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70B	348013	broad.mit.edu	37	13	114504827	114504827	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156589544	156589544	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN2	2199	broad.mit.edu	37	3	13659681	13659681	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928027	15928027	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO28	23219	broad.mit.edu	37	1	224344891	224344891	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO43	286151	broad.mit.edu	37	8	101146007	101146007	+	3'UTR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29008406	29008406	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171303668	171303668	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89409241	89409241	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOSL2	2355	broad.mit.edu	37	2	28631663	28631663	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71026710	71026710	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79203987	79203987	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP3	8939	broad.mit.edu	37	9	133495796	133495796	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PD	2539	broad.mit.edu	37	X	153774134	153774134	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161112996	161112996	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	52995724	52995724	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDE1	51573	broad.mit.edu	37	16	19533016	19533016	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58008066	58008066	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM2	84340	broad.mit.edu	37	5	74018089	74018089	+	Intron	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGA2	23062	broad.mit.edu	37	16	23481210	23481213	+	Intron	DEL	GTTT	-	-			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGA3	23163	broad.mit.edu	37	17	73234574	73234574	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCX	2677	broad.mit.edu	37	2	85785728	85785728	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31011594	31011594	+	Silent	SNP	C	A	A	rs35515360		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8043640	8043640	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9739614	9739614	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102977071	102977071	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUL	2752	broad.mit.edu	37	1	182353654	182353654	+	Silent	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57428785	57428785	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB3	2784	broad.mit.edu	37	12	6952602	6952602	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB3	2784	broad.mit.edu	37	12	6954758	6954758	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG4	2786	broad.mit.edu	37	1	235715289	235715289	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNS	2799	broad.mit.edu	37	12	65113804	65113804	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP1	9737	broad.mit.edu	37	X	101910147	101910147	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117113394	117113394	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRP	2922	broad.mit.edu	37	18	56892701	56892706	+	Intron	DEL	TGTTTT	-	-			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2	84163	broad.mit.edu	37	7	74212333	74212333	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27499802	27499802	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43484237	43484237	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC3	8916	broad.mit.edu	37	4	89570953	89570953	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3H	8357	broad.mit.edu	37	6	27776412	27776412	+	5'Flank	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38139454	38139454	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148763814	148763814	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186120955	186120955	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCL	3155	broad.mit.edu	37	1	24147139	24147139	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF1B	6928	broad.mit.edu	37	17	36070500	36070500	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122292685	122292685	+	Missense_Mutation	SNP	C	A	A	rs11833399	byFrequency;by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPRT1	3251	broad.mit.edu	37	X	133632324	133632324	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90B1	7184	broad.mit.edu	37	12	104337632	104337632	+	Silent	SNP	G	T	T	rs142832694		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652829	53652852	+	Intron	DEL	GCCGGGGCCGGGGCCGGGGCCGGT	-	-	rs78801842	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICK	22858	broad.mit.edu	37	6	52906107	52906107	+	5'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA21	3452	broad.mit.edu	37	9	21166213	21166213	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65684457	65684457	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151165556	151165556	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL16	3603	broad.mit.edu	37	15	81598993	81598993	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27456083	27456083	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL22	50616	broad.mit.edu	37	12	68646870	68646871	+	Intron	INS	-	A	A	rs34979529		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMP4	92856	broad.mit.edu	37	2	131100479	131100479	+	5'Flank	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62613951	62613951	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INF2	64423	broad.mit.edu	37	14	105302371	105302371	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCH	64799	broad.mit.edu	37	15	67677188	67677188	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156509595	156509595	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC2	23096	broad.mit.edu	37	X	53279551	53279551	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISYNA1	51477	broad.mit.edu	37	19	18546587	18546587	+	Missense_Mutation	SNP	C	A	A	rs150073676		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	161053001	161053001	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN1	55600	broad.mit.edu	37	1	160850573	160850573	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160919820	160919820	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24426670	24426670	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5020769	5020769	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119915159	119915159	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63246447	63246447	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103450879	103450879	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELR2	11014	broad.mit.edu	37	7	6509271	6509271	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	404966	404966	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	442778	442778	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26965337	26965337	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5462224	5462224	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44248904	44248904	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1958	158405	broad.mit.edu	37	9	115336670	115336670	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8926550	8926550	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200946273	200946273	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33374138	33374138	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158057529	158057529	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44588045	44588045	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241755404	241755404	+	Silent	SNP	C	A	A	rs150853900		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	T	T	rs121913529		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52943755	52943755	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT77	374454	broad.mit.edu	37	12	53091363	53091363	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153136030	153136030	+	Intron	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	129043234	129043234	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP7	51574	broad.mit.edu	37	4	113568633	113568633	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	37005156	37005156	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD2	401944	broad.mit.edu	37	1	22142393	22142393	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGSN	51557	broad.mit.edu	37	6	63989862	63989862	+	3'UTR	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	103969430	103969430	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108862316	108862316	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMLN	89782	broad.mit.edu	37	3	197723037	197723037	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148344544	148344544	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399815	399815	broad.mit.edu	37	10	124647809	124647809	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82452646	82452646	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP10	26020	broad.mit.edu	37	14	23344723	23344723	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC52	440699	broad.mit.edu	37	1	165533124	165533124	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40758866	40758866	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP1	7798	broad.mit.edu	37	1	23417947	23417947	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL1	84569	broad.mit.edu	37	10	29600040	29600040	+	3'UTR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504477	151504477	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65369180	65369180	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156283322	156283322	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44074064	44074064	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH7	64844	broad.mit.edu	37	2	160604631	160604631	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECOM	2122	broad.mit.edu	37	3	168807848	168807848	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37604236	37604236	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42865204	42865204	+	Intron	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFRP	83552	broad.mit.edu	37	11	119212363	119212363	+	Silent	SNP	C	A	A	rs138370910	byFrequency	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99279514	99279514	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPOL1	145282	broad.mit.edu	37	14	38016134	38016134	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49434718	49434718	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49444704	49444704	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36868109	36868109	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13188756	13188756	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP3	4356	broad.mit.edu	37	17	41907165	41907165	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL14	64928	broad.mit.edu	37	6	44081629	44081629	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL19	9801	broad.mit.edu	37	2	75874223	75874223	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55693288	55693288	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9695404	9695404	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR3	8897	broad.mit.edu	37	22	30412733	30412733	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXD3	83463	broad.mit.edu	37	5	176734745	176734745	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15854360	15854360	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10412919	10412919	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK2	85366	broad.mit.edu	37	20	30409531	30409531	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2685515	2685515	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47581623	47581623	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1983031	1983031	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA20	51126	broad.mit.edu	37	20	20013806	20013806	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89892584	89892584	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPSA	9476	broad.mit.edu	37	19	50868717	50868717	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149922368	149922368	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75565400	75565400	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180395	161180395	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56148463	56148463	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25477491	25477491	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NISCH	11188	broad.mit.edu	37	3	52522457	52522457	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15300124	15300124	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108032008	108032008	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPPA	4878	broad.mit.edu	37	1	11907523	11907523	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C1	2908	broad.mit.edu	37	5	142662064	142662064	+	Intron	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A2	4929	broad.mit.edu	37	2	157182142	157182142	+	3'UTR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115348786	115348786	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115383400	115383400	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33475497	33475497	+	Intron	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603830	5603830	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47857256	47857256	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47869353	47869353	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131765445	131765445	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134015959	134015959	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25899064	25899064	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224499625	224499625	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13F1	138805	broad.mit.edu	37	9	107266550	107266550	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248153601	248153601	+	5'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H14	403273	broad.mit.edu	37	3	97868072	97868073	+	5'Flank	INS	-	TAAA	TAAA			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55714360	55714360	+	5'Flank	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21758030	21758030	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179247751	179247751	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76844911	76844911	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149936222	149936222	+	Silent	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41805723	41805723	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK6	56924	broad.mit.edu	37	15	40564315	40564315	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARL	55486	broad.mit.edu	37	3	183551537	183551537	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140180996	140180996	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140207997	140207997	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140571984	140571984	+	5'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140753830	140753830	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47819896	47819896	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47831523	47831523	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7A	5150	broad.mit.edu	37	8	66701194	66701194	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5A	23244	broad.mit.edu	37	4	39871031	39871031	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5A	23244	broad.mit.edu	37	4	39974893	39974894	+	Intron	INS	-	GAG	GAG			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15126763	15126763	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZK1	5174	broad.mit.edu	37	1	145747065	145747065	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8049656	8049656	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX3	8504	broad.mit.edu	37	6	143792568	143792568	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4K2B	55300	broad.mit.edu	37	4	25256696	25256696	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	77006092	77006093	+	Intron	INS	-	AA	AA	rs149519043		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25155740	25155740	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110445369	110445369	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLRG1	5356	broad.mit.edu	37	4	155457782	155457782	+	3'UTR	DEL	T	-	-	rs71970519		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94563044	94563044	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCA	23203	broad.mit.edu	37	9	139312569	139312569	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L3	5387	broad.mit.edu	37	7	75145209	75145209	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG2	11232	broad.mit.edu	37	17	62492667	62492667	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1C	9533	broad.mit.edu	37	6	43487384	43487384	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL4	85313	broad.mit.edu	37	6	149842430	149842430	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102483829	102483829	+	Intron	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R14C	81706	broad.mit.edu	37	6	150570075	150570075	+	3'UTR	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R1A	5502	broad.mit.edu	37	12	54975735	54975735	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	145979813	145979813	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1B	5575	broad.mit.edu	37	7	720282	720282	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROSC	11212	broad.mit.edu	37	8	37635682	37635682	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43689346	43689346	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40480512	40480512	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54147519	54147533	+	Intron	DEL	GAGAAATTAAAAACA	-	-			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97311854	97311854	+	Intron	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198648988	198648988	+	Intron	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52321434	52321434	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58380880	58380880	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9BP1	9366	broad.mit.edu	37	5	104435126	104435126	+	5'Flank	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109381162	109381162	+	Silent	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1B	5908	broad.mit.edu	37	12	69020554	69020555	+	Intron	INS	-	T	T	rs77399444		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP	5909	broad.mit.edu	37	1	21940093	21940093	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130782164	130782164	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARRES1	5918	broad.mit.edu	37	3	158428549	158428549	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178110797	178110797	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF6	166824	broad.mit.edu	37	4	74442312	74442312	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCAN2	10231	broad.mit.edu	37	6	46191072	46191072	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR3	55758	broad.mit.edu	37	1	211452513	211452513	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73658967	73658967	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79314711	79314711	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16450898	16450898	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX7	64864	broad.mit.edu	37	15	56387452	56387452	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33260886	33260886	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38968087	38968087	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104831806	104831806	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87404356	87404356	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF139	11236	broad.mit.edu	37	8	125499067	125499084	+	In_Frame_Del	DEL	CTGTTTGTCTCTGCTTGC	-	-	rs142948801		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124765702	124765702	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROGDI	79641	broad.mit.edu	37	16	4847876	4847876	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA5	9252	broad.mit.edu	37	14	91365831	91365831	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RQCD1	9125	broad.mit.edu	37	2	219457146	219457146	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP4	64108	broad.mit.edu	37	3	187086387	187086387	+	Intron	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38938970	38938971	+	Intron	INS	-	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD7	344658	broad.mit.edu	37	3	169644746	169644746	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68312366	68312366	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68377483	68377483	+	Silent	SNP	C	A	A	rs148447188	byFrequency	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224463246	224463246	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018077	62018077	+	3'UTR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167304318	167304318	+	Intron	SNP	C	A	A	rs74728251	byFrequency;by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCPEP1	59342	broad.mit.edu	37	17	55078438	55078438	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE3	222663	broad.mit.edu	37	6	35211832	35211832	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195717102	195717102	+	5'UTR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195717134	195717134	+	5'UTR	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5053343	5053343	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76405446	76405447	+	Intron	INS	-	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101050843	101050843	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC2	347735	broad.mit.edu	37	1	31896500	31896500	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB8	5271	broad.mit.edu	37	18	61654575	61654575	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS6	6431	broad.mit.edu	37	20	42089432	42089432	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85892326	85892326	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67155796	67155796	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BGRL2	83699	broad.mit.edu	37	6	80409266	80409267	+	3'UTR	INS	-	CCC	CCC			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHARPIN	81858	broad.mit.edu	37	8	145158166	145158166	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT1	54847	broad.mit.edu	37	3	113286456	113286456	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIX2	10736	broad.mit.edu	37	2	45233169	45233169	+	3'UTR	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIX5	147912	broad.mit.edu	37	19	46270467	46270467	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160460449	160460449	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A8	84561	broad.mit.edu	37	3	124906167	124906167	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50819918	50819918	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A5	6510	broad.mit.edu	37	19	47285606	47285606	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A3	151295	broad.mit.edu	37	2	220028047	220028047	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A11	8402	broad.mit.edu	37	17	4841663	4841663	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A38	54977	broad.mit.edu	37	3	39432849	39432849	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A42	284439	broad.mit.edu	37	19	19218621	19218621	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A8	116369	broad.mit.edu	37	6	35911772	35911772	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B2	347734	broad.mit.edu	37	6	44222489	44222489	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A2	29986	broad.mit.edu	37	14	21469801	21469801	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72400023	72400023	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48696370	48696370	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A3	6531	broad.mit.edu	37	5	1441518	1441518	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170198379	170198379	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23244555	23244555	+	Intron	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98797490	98797490	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168149356	168149356	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAP1	60682	broad.mit.edu	37	6	71566660	71566660	+	Silent	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1161275	1161275	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101625239	101625239	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106983137	106983137	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE1	285955	broad.mit.edu	37	7	44048438	44048438	+	3'UTR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167656221	167656221	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18655731	18655731	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36014693	36014694	+	Intron	DNP	GA	AG	AG			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64238719	64238719	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2817170	2817170	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSRP1	6749	broad.mit.edu	37	11	57099700	57099700	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52553416	52553416	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX12	23673	broad.mit.edu	37	1	28148860	28148860	+	3'UTR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	883105	883105	+	Silent	SNP	C	A	A	rs113652875	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113166722	113166722	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115489050	115489050	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64655240	64655240	+	Intron	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132874425	132874425	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF9	6880	broad.mit.edu	37	5	68661652	68661652	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19166849	19166849	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN1	83940	broad.mit.edu	37	8	125534428	125534428	+	Silent	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAZ	6901	broad.mit.edu	37	X	153648424	153648424	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D14	57533	broad.mit.edu	37	4	7032157	7032157	+	3'UTR	SNP	C	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37298891	37298891	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351269	60351269	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TC2N	123036	broad.mit.edu	37	14	92268648	92268648	+	Nonsense_Mutation	SNP	A	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD4	7004	broad.mit.edu	37	12	3104108	3104108	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53453882	53453882	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB1M	51106	broad.mit.edu	37	6	155632408	155632408	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43571829	43571829	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98170294	98170294	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR7	51284	broad.mit.edu	37	X	12904472	12904472	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44693440	44693440	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19642327	19642327	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175105999	175105999	+	Missense_Mutation	SNP	G	T	T	rs147711632	byFrequency	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5348825	5348825	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35728923	35728923	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP1	1200	broad.mit.edu	37	11	6636052	6636052	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM23	373	broad.mit.edu	37	5	64890374	64890374	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D4	81628	broad.mit.edu	37	7	100074811	100074811	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2132360	2132360	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN7	7102	broad.mit.edu	37	X	38540499	38540499	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC3	7267	broad.mit.edu	37	21	38573591	38573591	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179478707	179478707	+	Intron	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179615912	179615912	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D4	51619	broad.mit.edu	37	7	43982455	43982455	+	Missense_Mutation	SNP	C	A	A	rs149083828		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGP2	7360	broad.mit.edu	37	2	64083742	64083742	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229773336	229773336	+	Silent	SNP	C	A	A	rs80169786	byFrequency;by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP35	57558	broad.mit.edu	37	11	77921874	77921874	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP18	51096	broad.mit.edu	37	17	49362861	49362861	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2R	2837	broad.mit.edu	37	17	80332555	80332555	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	27638792	27638792	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	69594093	69594102	+	IGR	DEL	AGAAAGAGAT	-	-	rs80081772		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	21835089	21835089	+	IGR	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84865854	84865854	+	IGR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16457128	16457128	+	IGR	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52032130	52032130	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14613859	14613859	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35033442	35033442	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106240839	106240839	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532170	187532170	+	IGR	SNP	G	C	C	rs150407041	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	20853201	20853201	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	22649288	22649288	+	IGR	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	70996697	70996697	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10623187	10623187	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14793957	14793957	+	IGR	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045305	210045305	+	IGR	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464808	90464808	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872339	91872339	+	IGR	SNP	A	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872491	91872491	+	IGR	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	120525179	120525179	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12892221	12892221	+	IGR	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90271037	90271037	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	46726436	46726436	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57459872	57459872	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69749972	69749972	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70115669	70115669	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	157787614	157787614	+	IGR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	28700151	28700151	+	IGR	SNP	C	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	36642419	36642419	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80774142	80774142	+	IGR	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27532006	27532006	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99738303	99738303	+	IGR	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	144138426	144138426	+	IGR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44080055	44080055	+	IGR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88370958	88370958	+	IGR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	113623678	113623678	+	IGR	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58011263	58011263	+	IGR	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAPB	9217	broad.mit.edu	37	20	57019084	57019084	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2843642	2843642	+	Intron	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46715497	46715497	+	Intron	SNP	T	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58315682	58315682	+	Intron	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAPAL	23063	broad.mit.edu	37	10	88218726	88218726	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43638417	43638417	+	5'UTR	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43650921	43650921	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE1	7465	broad.mit.edu	37	11	9598349	9598349	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIF1	11197	broad.mit.edu	37	12	65471466	65471466	+	Intron	SNP	A	G	G			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78466672	78466672	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21862531	21862531	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64823782	64823782	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64827499	64827499	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141164094	141164094	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H15	55854	broad.mit.edu	37	2	187366254	187366255	+	Intron	DEL	TG	-	-	rs149066234		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88664679	88664679	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52961078	52961078	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP112	7771	broad.mit.edu	37	19	44847409	44847409	+	Silent	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106813793	106813793	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX3	23051	broad.mit.edu	37	20	39831017	39831017	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIK1	284307	broad.mit.edu	37	19	58096256	58096256	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44797365	44797365	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27420068	27420068	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF25	219749	broad.mit.edu	37	10	38241751	38241751	+	Silent	SNP	T	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95843292	95843292	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53644247	53644247	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF480	147657	broad.mit.edu	37	19	52817559	52817559	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62597380	62597380	+	Intron	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934652	30934652	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31039063	31039063	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF665	79788	broad.mit.edu	37	19	53678702	53678702	+	Silent	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF680	340252	broad.mit.edu	37	7	63982389	63982389	+	Missense_Mutation	SNP	T	C	C	rs149707711		TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF761	388561	broad.mit.edu	37	19	53952613	53952613	+	Intron	SNP	G	T	T			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF814	730051	broad.mit.edu	37	19	58384993	58384993	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143079311	143079311	+	Intron	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28734168	28734168	+	Silent	SNP	C	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23108985	23108985	+	Intron	SNP	C	G	G	rs147294046	by1000genomes	TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33784247	33784247	+	5'Flank	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20805603	20805603	+	RNA	SNP	G	A	A			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96523280	96523280	+	Intron	SNP	G	C	C			TCGA-49-4510-01A-01D-1265-08	TCGA-49-4510-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
