Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7760649	7760649	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASDH	132949	broad.mit.edu	37	4	57222636	57222636	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67188650	67188650	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67212137	67212137	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48443428	48443428	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67113934	67113934	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87144540	87144540	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20685268	20685268	+	5'Flank	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20685744	20685744	+	5'Flank	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB7	22	broad.mit.edu	37	X	74290242	74290242	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44073245	44073245	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD10	55347	broad.mit.edu	37	3	111700675	111700675	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD13	84945	broad.mit.edu	37	13	108881888	108881888	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD5	51099	broad.mit.edu	37	3	43743643	43743643	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP1	9744	broad.mit.edu	37	17	7245243	7245244	+	Intron	DNP	CC	AT	AT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31343092	31343092	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN5	51802	broad.mit.edu	37	4	156787352	156787352	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE2	59272	broad.mit.edu	37	X	15603664	15603664	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185679038	185679038	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185709941	185709941	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL4	2182	broad.mit.edu	37	X	108911376	108911376	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL7B	10880	broad.mit.edu	37	9	111617550	111617550	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207436511	207436511	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207460940	207460940	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24177921	24177921	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39613420	39613420	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106805573	106805573	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062119	107062119	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33662202	33662202	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130343194	130343194	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43771376	43771376	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43833272	43833272	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64538065	64538065	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64587298	64587298	+	Splice_Site	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84706570	84706570	+	3'UTR	SNP	G	T	T	rs146074595		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL4	54507	broad.mit.edu	37	1	150531542	150531542	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154569800	154569800	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7691002	7691002	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100266283	100266283	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH4	127	broad.mit.edu	37	4	100063722	100063722	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH4	127	broad.mit.edu	37	4	100063990	100063990	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2A	150	broad.mit.edu	37	10	112838282	112838282	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67051130	67051130	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88055521	88055521	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743758	147743758	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74320873	74320873	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100382210	100382210	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105413167	105413167	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105420366	105420366	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105420648	105420648	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62298829	62298829	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	434671	434671	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106968029	106968029	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33291371	33291371	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117138926	117138926	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C2	1646	broad.mit.edu	37	10	5032332	5032332	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1CL1	340811	broad.mit.edu	37	10	5203880	5203880	+	RNA	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS2	212	broad.mit.edu	37	X	55040070	55040070	+	Silent	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALCAM	214	broad.mit.edu	37	3	105266233	105266234	+	Splice_Site	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH4	54784	broad.mit.edu	37	7	102097955	102097955	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29498008	29498008	+	Silent	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29498359	29498359	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202211450	202211450	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56438863	56438863	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMICA1	120425	broad.mit.edu	37	11	118081381	118081381	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38476053	38476053	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2A	279	broad.mit.edu	37	1	104166313	104166313	+	Intron	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104115988	104115989	+	Intron	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41519012	41519012	+	Intron	SNP	C	A	A	rs139762174	byFrequency	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41526069	41526069	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114176839	114176839	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114264349	114264349	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKK1	255239	broad.mit.edu	37	11	113266829	113266829	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241465583	241465583	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13B	124930	broad.mit.edu	37	17	27935036	27935036	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34B	340120	broad.mit.edu	37	5	79855837	79855837	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD45	339416	broad.mit.edu	37	1	173616126	173616126	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS4B	257629	broad.mit.edu	37	16	21244947	21244947	+	5'Flank	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29725805	29725805	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29745310	29745311	+	Frame_Shift_Ins	INS	-	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71783621	71783621	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2B1	163	broad.mit.edu	37	17	34044368	34044368	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4E1	23431	broad.mit.edu	37	15	51242140	51242140	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36362085	36362085	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAF	369	broad.mit.edu	37	X	47424595	47424595	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP1	116985	broad.mit.edu	37	11	72412831	72412831	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36149351	36149351	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148744109	148744109	+	Splice_Site	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130217848	130217848	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11204553	11204553	+	Splice_Site	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11243974	11243974	+	Intron	DEL	T	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF19	128272	broad.mit.edu	37	1	16531234	16531234	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX5	64860	broad.mit.edu	37	X	101857749	101857749	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	123007009	123007009	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131088539	131088539	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119382512	119382512	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4A	115201	broad.mit.edu	37	X	107394965	107394965	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108175670	108175670	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138908999	138908999	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160147225	160147225	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4B	496	broad.mit.edu	37	13	114307723	114307723	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5SL	55101	broad.mit.edu	37	19	41939238	41939238	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138441295	138441295	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138455936	138455936	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77266706	77266706	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1796656	1796656	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76937081	76937081	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT1	2583	broad.mit.edu	37	12	58020563	58020563	+	Frame_Shift_Del	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT2	124872	broad.mit.edu	37	17	47218867	47218867	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11029543	11029543	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047544	11047544	+	3'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L1	55971	broad.mit.edu	37	7	97941430	97941430	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134319794	134319794	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171561168	171561168	+	3'UTR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31616977	31616977	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP29	55973	broad.mit.edu	37	7	107258738	107258738	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDHB	594	broad.mit.edu	37	6	80878601	80878601	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL8	606	broad.mit.edu	37	15	20874950	20874950	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599694	136599694	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599790	136599790	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129149396	129149396	+	Missense_Mutation	SNP	G	T	T	rs138477961		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHB9	80823	broad.mit.edu	37	X	102004609	102004609	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61870669	61870669	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55758937	55758937	+	Silent	SNP	G	T	T	rs148287752		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13616838	13616838	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31606702	31606702	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31627074	31627074	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31631305	31631305	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50217165	50217165	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92445140	92445140	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79980529	79980529	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSND	7809	broad.mit.edu	37	1	55474247	55474247	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BST1	683	broad.mit.edu	37	4	15733498	15733498	+	3'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92604822	92604822	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A1	11119	broad.mit.edu	37	6	26413835	26413835	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180338550	180338550	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf48	55010	broad.mit.edu	37	12	102589845	102589845	+	Nonsense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf5	57103	broad.mit.edu	37	12	4430314	4430314	+	5'Flank	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf118	55668	broad.mit.edu	37	14	76633041	76633041	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf143	90141	broad.mit.edu	37	14	90420856	90420856	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40675518	40675518	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24921596	24921596	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf51	196968	broad.mit.edu	37	15	100344936	100344936	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf55	256646	broad.mit.edu	37	15	34647065	34647065	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf11	146325	broad.mit.edu	37	16	613968	613968	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf95	124512	broad.mit.edu	37	17	74729912	74729912	+	3'UTR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf22	79863	broad.mit.edu	37	18	77804297	77804297	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf54	162681	broad.mit.edu	37	18	51887257	51887257	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf2	8725	broad.mit.edu	37	19	30462166	30462166	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1GALT1C1	29071	broad.mit.edu	37	X	119760065	119760065	+	Nonstop_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf109	54955	broad.mit.edu	37	1	38155361	38155361	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179380264	179380264	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35766357	35766357	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf71	128861	broad.mit.edu	37	20	31811579	31811579	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15352034	15352034	+	RNA	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043796	74043796	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf80	389073	broad.mit.edu	37	2	209030479	209030479	+	3'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf80	389073	broad.mit.edu	37	2	209045986	209045986	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf19	51244	broad.mit.edu	37	3	14709757	14709757	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf1	51300	broad.mit.edu	37	3	119236107	119236107	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf55	152078	broad.mit.edu	37	3	157271098	157271098	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81308886	81308886	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47846147	47846147	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121629330	121629330	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf221	154288	broad.mit.edu	37	6	74072525	74072525	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40945338	40945338	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8A	731	broad.mit.edu	37	1	57372457	57372457	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57417726	57417726	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf79	286234	broad.mit.edu	37	9	90499594	90499594	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181708263	181708263	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181725312	181725312	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	55043403	55043403	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1965438	1965438	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB4	785	broad.mit.edu	37	2	152717374	152717374	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93073151	93073151	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71743772	71743772	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANT1	124583	broad.mit.edu	37	17	76993507	76993507	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN8	388743	broad.mit.edu	37	1	223831833	223831833	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZA3	93661	broad.mit.edu	37	12	18891415	18891415	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARNS1	57571	broad.mit.edu	37	11	67186368	67186368	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLL1	79872	broad.mit.edu	37	7	107399544	107399544	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC120	90060	broad.mit.edu	37	X	48921447	48921447	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106139682	106139682	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93705087	93705087	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC61	729440	broad.mit.edu	37	19	46509878	46509878	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC85A	114800	broad.mit.edu	37	2	56420624	56420624	+	Intron	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL15	6359	broad.mit.edu	37	17	34328476	34328476	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7531657	7531658	+	Nonsense_Mutation	DNP	TC	CA	CA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7653624	7653624	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158152695	158152695	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD248	57124	broad.mit.edu	37	11	66084155	66084155	+	Missense_Mutation	SNP	G	T	T	rs140616335	byFrequency	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD68	968	broad.mit.edu	37	17	7484873	7484874	+	3'UTR	INS	-	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60783254	60783254	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23066072	23066072	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149945946	149945946	+	Missense_Mutation	SNP	C	G	G	rs143706982		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149962192	149962192	+	Silent	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149983442	149983442	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100858742	100858742	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227216981	227216981	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC45	8318	broad.mit.edu	37	22	19471345	19471345	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21783506	21783506	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25573585	25573585	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85956519	85956519	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85961604	85961604	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK18	5129	broad.mit.edu	37	1	205498423	205498423	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72667527	72667527	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEL	1056	broad.mit.edu	37	9	135947097	135947098	+	Frame_Shift_Ins	INS	-	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214836865	214836865	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFP	5199	broad.mit.edu	37	X	47483656	47483656	+	3'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	432380	432380	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN1	1123	broad.mit.edu	37	2	175673516	175673516	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHORDC1	26973	broad.mit.edu	37	11	89947237	89947237	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA10	57053	broad.mit.edu	37	11	3688774	3688775	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61980992	61980992	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61981902	61981902	+	Silent	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61982063	61982063	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120208591	120208591	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86894260	86894260	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCF1	23529	broad.mit.edu	37	11	67133123	67133123	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143017680	143017680	+	Intron	SNP	G	C	C	rs78757074		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143028775	143028775	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4E	26253	broad.mit.edu	37	12	8689618	8689618	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10218183	10218183	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73731815	73731815	+	5'UTR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK1	1195	broad.mit.edu	37	2	201726036	201726036	+	Silent	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10566338	10566338	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19226984	19226984	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87674125	87674125	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21488972	21488972	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58582513	58582513	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58582515	58582515	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205036280	205036281	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486440	76486440	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76513434	76513434	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76523628	76523628	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7837875	7837875	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51327225	51327225	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103354079	103354080	+	Intron	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103474073	103474073	+	Splice_Site	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75875291	75875291	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32138491	32138491	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105794522	105794523	+	Missense_Mutation	DNP	GC	AA	AA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105824153	105824154	+	Intron	DNP	CG	AT	AT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70637771	70637771	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109745304	109745304	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189856407	189856407	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189866377	189866377	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137690125	137690125	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137707845	137707845	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70952250	70952250	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130021883	130021883	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211456741	211456741	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF1	29894	broad.mit.edu	37	8	145622835	145622835	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88009014	88009014	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125506688	125506688	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125506699	125506699	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43907388	43907388	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNKL1	51340	broad.mit.edu	37	20	20022308	20022308	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGB	1419	broad.mit.edu	37	2	209010407	209010407	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645934	4645934	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34238194	34238194	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113348921	113348921	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113364763	113364763	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113484937	113484937	+	Splice_Site	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113657527	113657527	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS2	56474	broad.mit.edu	37	X	16716320	16716320	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119672691	119672691	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L1	55280	broad.mit.edu	37	10	101993008	101993008	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49032733	49032733	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf38	159013	broad.mit.edu	37	X	40506276	40506276	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143957731	143957731	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26B1	56603	broad.mit.edu	37	2	72359642	72359642	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20107987	20107987	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58071770	58071770	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58514089	58514089	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DALRD3	55152	broad.mit.edu	37	3	49055934	49055934	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAOA	267012	broad.mit.edu	37	13	106118685	106118685	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173800762	173800762	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125299761	125299761	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172314679	172314679	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST2	127579	broad.mit.edu	37	1	154995563	154995563	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61090631	61090631	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50537934	50537934	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134680668	134680668	+	Silent	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFA4	1669	broad.mit.edu	37	8	6794163	6794163	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197522226	197522226	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234365975	234365975	+	Splice_Site	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137206751	137206751	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS3	9249	broad.mit.edu	37	1	12628246	12628246	+	3'UTR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC1	116093	broad.mit.edu	37	2	189599658	189599658	+	5'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP1	84976	broad.mit.edu	37	1	223164132	223164132	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83502076	83502076	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35365842	35365842	+	Silent	SNP	G	T	T	rs149715442		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124380926	124380926	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32380886	32380886	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124393958	124393958	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124409644	124409644	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21646324	21646324	+	Silent	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76430066	76430066	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11666936	11666936	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111368565	111368565	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111580244	111580244	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY1	23033	broad.mit.edu	37	6	83829489	83829489	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2216346	2216346	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162903857	162903857	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154519640	154519640	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35209052	35209052	+	Intron	SNP	C	T	T	rs55950129		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98011766	98011766	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113866281	113866281	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28602364	28602364	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117310239	117310239	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56328453	56328453	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56371508	56371508	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481041	56481041	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56510720	56510720	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTL	51514	broad.mit.edu	37	1	212245479	212245479	+	Missense_Mutation	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP15	128853	broad.mit.edu	37	20	30436290	30436290	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348120	348120	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167082844	167082844	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7132214	7132214	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103060300	103060300	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4705718	4705718	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71778163	71778163	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP3	9666	broad.mit.edu	37	3	108392919	108392919	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150484749	150484749	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDAR	10913	broad.mit.edu	37	2	109527343	109527343	+	Intron	SNP	C	A	A	rs114808659	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	68840767	68840767	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	69249397	69249397	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB1	79645	broad.mit.edu	37	8	49637178	49637178	+	3'UTR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB3	146779	broad.mit.edu	37	17	60484501	60484501	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA2	286097	broad.mit.edu	37	8	16956024	16956024	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD2	30846	broad.mit.edu	37	19	48239761	48239761	+	Frame_Shift_Del	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B2	8892	broad.mit.edu	37	14	75475981	75475981	+	3'UTR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120810820	120810820	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37052857	37052857	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELSPBP1	64100	broad.mit.edu	37	19	48519179	48519179	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79470904	79470904	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP6	133121	broad.mit.edu	37	4	185045347	185045347	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB4	2050	broad.mit.edu	37	7	100421830	100421830	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142566876	142566876	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2A	7957	broad.mit.edu	37	6	145948691	145948691	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212522492	212522492	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC8	1161	broad.mit.edu	37	5	60198430	60198430	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216737622	216737622	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESX1	80712	broad.mit.edu	37	X	103499355	103499355	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT1	23344	broad.mit.edu	37	12	56531347	56531347	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETNK1	55500	broad.mit.edu	37	12	22826403	22826403	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	13935690	13935690	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC	2121	broad.mit.edu	37	4	5750028	5750028	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	549144	549144	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133849873	133849873	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169528535	169528535	+	Splice_Site	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138643882	138643882	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A2	10827	broad.mit.edu	37	5	153390880	153390880	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM117A	81558	broad.mit.edu	37	17	47841458	47841458	+	5'UTR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63412380	63412380	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63413235	63413235	+	5'UTR	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184853655	184853655	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM149A	25854	broad.mit.edu	37	4	187077278	187077278	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29245179	29245179	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183A	440585	broad.mit.edu	37	1	43616454	43616454	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2698298	2698298	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A2	338811	broad.mit.edu	37	12	62147391	62147391	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51826489	51826489	+	5'Flank	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45A	404636	broad.mit.edu	37	10	120867384	120867384	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34961736	34961736	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029346	37029346	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70A	55026	broad.mit.edu	37	X	119394645	119394645	+	3'UTR	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70A	55026	broad.mit.edu	37	X	119425233	119425233	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM90A1	55138	broad.mit.edu	37	12	8377324	8377324	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM91A1	157769	broad.mit.edu	37	8	124792208	124792208	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89858564	89858564	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45645710	45645710	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99042284	99042284	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92613738	92613738	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336245	126336245	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8131064	8131064	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518815	161518815	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137774507	137774507	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDX1	2230	broad.mit.edu	37	11	110327477	110327477	+	Intron	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FECH	2235	broad.mit.edu	37	18	55233636	55233636	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERD3L	222894	broad.mit.edu	37	7	19184872	19184872	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD2	221472	broad.mit.edu	37	6	36988305	36988305	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF23	8074	broad.mit.edu	37	12	4479814	4479814	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72715150	72715150	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9L	360132	broad.mit.edu	37	7	55759105	55759105	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLI1	2313	broad.mit.edu	37	11	128638221	128638221	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84534412	84534412	+	3'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28599082	28599082	+	Splice_Site	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240497408	240497409	+	Splice_Site	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89421795	89421795	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOSL1	8061	broad.mit.edu	37	11	65664372	65664372	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114019594	114019594	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114329805	114329805	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79387361	79387361	+	Splice_Site	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39262601	39262601	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29632590	29632590	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12728793	12728793	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49381376	49381376	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUNDC2	65991	broad.mit.edu	37	X	154261737	154261737	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC2	57818	broad.mit.edu	37	2	169763212	169763212	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17447089	17447089	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151123293	151123293	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46099303	46099303	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88431915	88431915	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT8	26290	broad.mit.edu	37	12	4829883	4829883	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT8	26290	broad.mit.edu	37	12	4870357	4870357	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS6	2621	broad.mit.edu	37	13	114537745	114537745	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9829868	9829868	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100557	8100557	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2A	54815	broad.mit.edu	37	19	19611940	19611940	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89651052	89651052	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1	54332	broad.mit.edu	37	8	75263755	75263755	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76938781	76938781	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55216299	55216299	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGTLC1	92086	broad.mit.edu	37	20	23967157	23967157	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31014581	31014581	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150163991	150163991	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK3P	2713	broad.mit.edu	37	4	166200358	166200358	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121554950	121554950	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121708821	121708821	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42187792	42187792	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT8D2	83468	broad.mit.edu	37	12	104396881	104396881	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143928046	143928046	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56377844	56377844	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAZ	2781	broad.mit.edu	37	22	23438319	23438319	+	Frame_Shift_Del	DEL	A	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8DP	100132979	broad.mit.edu	37	15	22709382	22709382	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPKOW	27238	broad.mit.edu	37	X	48978895	48978895	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136112696	136112696	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135428834	135428834	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR119	139760	broad.mit.edu	37	X	129519554	129519554	+	5'Flank	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368430	72368430	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR153	387509	broad.mit.edu	37	1	6313832	6313832	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887427	25887427	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124387384	124387384	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR4	2828	broad.mit.edu	37	19	46094361	46094361	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19049006	19049006	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR83	10888	broad.mit.edu	37	11	94126755	94126755	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPSM1	26086	broad.mit.edu	37	9	139243084	139243084	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158262431	158262431	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122551197	122551197	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87379647	87379647	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102074265	102074265	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK5	2901	broad.mit.edu	37	19	42560809	42560811	+	Intron	TNP	CTC	ACA	ACA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13716296	13716296	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104432627	104432627	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146350550	146350550	+	5'UTR	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146747740	146747740	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88582937	88582937	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126079232	126079232	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2F1	2962	broad.mit.edu	37	19	6389580	6389580	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106697537	106697537	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYS2	2998	broad.mit.edu	37	12	21721852	21721852	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105280884	105280884	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108935785	108935785	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122626567	122626567	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAT1	8520	broad.mit.edu	37	2	172778896	172778896	+	5'Flank	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153221632	153221632	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73617590	73617590	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18868754	18868754	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236714074	236714074	+	3'UTR	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC5	51191	broad.mit.edu	37	4	89414161	89414161	+	Splice_Site	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBCH	26275	broad.mit.edu	37	2	191159310	191159310	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AH	85235	broad.mit.edu	37	6	27115267	27115267	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4B	8366	broad.mit.edu	37	6	26027319	26027319	+	Missense_Mutation	SNP	C	G	G	rs147907725		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4I	8294	broad.mit.edu	37	6	27107390	27107390	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-L	3139	broad.mit.edu	37	6	30228389	30228389	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27134888	27134888	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27147727	27147727	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27148137	27148137	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB4	3214	broad.mit.edu	37	17	46654118	46654118	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC10	3226	broad.mit.edu	37	12	54379592	54379592	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC12	3228	broad.mit.edu	37	12	54348814	54348814	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187706	152187706	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38652344	38652344	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB7	27129	broad.mit.edu	37	1	16343586	16343586	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22167739	22167739	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47409356	47409356	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	113865397	113865397	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113857205	113857205	+	Intron	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3148485	3148485	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYOU1	10525	broad.mit.edu	37	11	118923183	118923183	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBSP	3381	broad.mit.edu	37	4	88731895	88731895	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23401104	23401104	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFL2	147920	broad.mit.edu	37	19	46664363	46664363	+	3'UTR	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201195307	201195307	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118624650	118624650	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130416645	130416645	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213886733	213886733	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1B	3553	broad.mit.edu	37	2	113591174	113591174	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27441330	27441330	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL22	50616	broad.mit.edu	37	12	68646163	68646163	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70330149	70330149	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3146489	3146489	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876570	35876570	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILF3	3609	broad.mit.edu	37	19	10788125	10788125	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242662323	242662323	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF3	401067	broad.mit.edu	37	3	51864584	51864584	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156514159	156514159	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK1	3654	broad.mit.edu	37	X	153277301	153277301	+	3'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227662710	227662710	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107978507	107978507	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145530222	145530222	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70521703	70521703	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7780576	7780576	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54780278	54780278	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35107550	35107550	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24443819	24443819	+	Missense_Mutation	SNP	C	A	A	rs150580767		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP3	282973	broad.mit.edu	37	10	133930853	133930853	+	Silent	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87678336	87678336	+	Silent	SNP	C	A	A	rs112449440		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA6	3742	broad.mit.edu	37	12	4920341	4920341	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318671	21318671	+	Missense_Mutation	SNP	G	T	T	rs3752032	byFrequency;by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68172471	68172471	+	3'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73751906	73751906	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138678013	138678013	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196274434	196274434	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202702652	202702652	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142640996	142640996	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142641367	142641367	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651545	142651545	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658913	142658913	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDC1L	100129128	broad.mit.edu	37	6	73933460	73933460	+	3'UTR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26965369	26965369	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0195	9772	broad.mit.edu	37	17	73488697	73488697	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0247	9766	broad.mit.edu	37	14	70171520	70171520	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35940490	35940490	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15692615	15692615	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0664	23277	broad.mit.edu	37	17	2605385	2605385	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8783547	8783547	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86544146	86544146	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94087403	94087403	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1804	84451	broad.mit.edu	37	1	233514643	233514643	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1919	91749	broad.mit.edu	37	6	111585238	111585238	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39756909	39756909	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245704255	245704255	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900967	51900967	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901301	51901301	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45216369	45216369	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC2	90990	broad.mit.edu	37	8	145695058	145695058	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55255110	55255110	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86887409	86887409	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK3	354	broad.mit.edu	37	19	51363278	51363278	+	3'UTR	SNP	G	A	A	rs61736309	byFrequency;by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRK1	22914	broad.mit.edu	37	12	10531201	10531201	+	Nonsense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186461476	186461476	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA2	3838	broad.mit.edu	37	17	66042116	66042116	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149420812	149420812	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149421940	149421940	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT12	3859	broad.mit.edu	37	17	39019653	39019653	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52882021	52882021	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52758891	52758891	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253560	32253560	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-2	337969	broad.mit.edu	37	21	31859528	31859528	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-3	337970	broad.mit.edu	37	21	31864067	31864067	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KYNU	8942	broad.mit.edu	37	2	143790928	143790928	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6943237	6943237	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112460960	112460960	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112462801	112462801	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107596050	107596050	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203743121	203743121	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66070859	66070859	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104309458	104309458	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54780518	54780518	+	Intron	SNP	C	A	A	rs139172802	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54780746	54780746	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284232	284232	broad.mit.edu	37	13	19432977	19432977	+	RNA	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC341056	341056	broad.mit.edu	37	11	122888910	122888910	+	RNA	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389458	389458	broad.mit.edu	37	7	5024663	5024663	+	5'UTR	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC494141	494141	broad.mit.edu	37	11	18231373	18231373	+	RNA	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23241833	23241833	+	RNA	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23247203	23247203	+	RNA	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161006351	161006351	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2931392	2931392	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99764492	99764492	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99766361	99766361	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771956	99771956	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141264282	141264282	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141625343	141625343	+	Silent	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141819597	141819597	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170063626	170063626	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25581118	25581121	+	Intron	DEL	TAAG	-	-	rs3834707		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC39	127495	broad.mit.edu	37	1	100624028	100624028	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC58	116064	broad.mit.edu	37	3	120054529	120054529	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRWD1	222229	broad.mit.edu	37	7	102106858	102106861	+	Intron	DEL	TTTA	-	-	rs66463732		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSG1	55341	broad.mit.edu	37	3	194366963	194366963	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM14A	26065	broad.mit.edu	37	19	34718339	34718339	+	3'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33246225	33246225	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33622196	33622196	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	25004827	25004827	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160784336	160784336	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235969162	235969162	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA5	4104	broad.mit.edu	37	X	151283214	151283214	+	3'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291679	141291679	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED1	9500	broad.mit.edu	37	X	51639760	51639760	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED1	9500	broad.mit.edu	37	X	51640681	51640681	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75004170	75004170	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75004996	75004996	+	5'UTR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEH1	28986	broad.mit.edu	37	X	55479571	55479571	+	3'UTR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75298562	75298562	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119728884	119728884	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC3R	4159	broad.mit.edu	37	20	54824480	54824480	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC3R	4159	broad.mit.edu	37	20	54824808	54824808	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30675788	30675788	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37623622	37623622	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90499592	90499592	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151112334	151112334	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED14	9282	broad.mit.edu	37	X	40572200	40572200	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156450847	156450847	+	Intron	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3297275	3297275	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS3	56917	broad.mit.edu	37	19	47912735	47912735	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88755829	88755829	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL14	57721	broad.mit.edu	37	4	119612646	119612646	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFF	56947	broad.mit.edu	37	2	228217347	228217347	+	Intron	SNP	C	T	T	rs112530451		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFNG	4242	broad.mit.edu	37	22	37875600	37875600	+	Intron	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141721963	141721963	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR410	574434	broad.mit.edu	37	14	101532187	101532187	+	5'Flank	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR622	693207	broad.mit.edu	37	13	90882767	90882767	+	5'Flank	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR890	100126303	broad.mit.edu	37	X	145076418	145076418	+	5'Flank	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20414343	20414343	+	Silent	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102822815	102822815	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44639949	44639949	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGS	7841	broad.mit.edu	37	2	74690191	74690191	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108690320	108690320	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL47	57129	broad.mit.edu	37	3	179311818	179311818	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60183058	60183058	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSX1	4487	broad.mit.edu	37	4	4864368	4864369	+	Intron	INS	-	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86588112	86588112	+	Intron	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9726684	9726684	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11175571	11175571	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29599271	29599271	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100683533	100683533	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1269244	1269244	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3228872	3228872	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADML	151325	broad.mit.edu	37	2	33952176	33952176	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCN	4613	broad.mit.edu	37	2	16082194	16082194	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10222405	10222405	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10398136	10398136	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23855735	23855735	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36708026	36708026	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18039722	18039722	+	Intron	SNP	C	A	A	rs117767901	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18044107	18044107	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109459025	109459025	+	Splice_Site	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109847223	109847223	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128346070	128346070	+	Silent	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9B	4650	broad.mit.edu	37	19	17296811	17296811	+	Splice_Site	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12639334	12639334	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95079598	95079598	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24383886	24383886	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1921221	1921222	+	Intron	INS	-	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40115128	40115128	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA38	51691	broad.mit.edu	37	7	117828412	117828412	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL2	254827	broad.mit.edu	37	3	175520882	175520882	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78591054	78591054	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35864687	35864687	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	146013498	146013498	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134086941	134086941	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133541592	133541592	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00164	554226	broad.mit.edu	37	2	133014513	133014513	+	Intron	SNP	G	A	A	rs77333908	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00207	388910	broad.mit.edu	37	22	44967363	44967363	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115751124	115751124	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84028085	84028085	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170345816	170345816	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK3	4752	broad.mit.edu	37	13	52728029	52728029	+	Splice_Site	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52802578	52802578	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45004562	45004562	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD1	4760	broad.mit.edu	37	2	182543486	182543486	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22145778	22145778	+	RNA	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29654741	29654742	+	Frame_Shift_Ins	INS	-	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29661882	29661882	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52505699	52505699	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25462855	25462855	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173322580	173322580	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5811275	5811275	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7083644	7083644	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP1	22861	broad.mit.edu	37	17	5436132	5436132	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588623	247588623	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588625	247588625	+	Missense_Mutation	SNP	A	G	G	rs104895385		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247607377	247607377	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMBR	4829	broad.mit.edu	37	6	142409829	142409829	+	5'UTR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL6	65083	broad.mit.edu	37	9	33469225	33469225	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155764448	155764448	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS4	266743	broad.mit.edu	37	11	66189700	66189700	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS4	266743	broad.mit.edu	37	11	66189949	66189949	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPEPL1	79716	broad.mit.edu	37	20	57287652	57287652	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	72897572	72897572	+	5'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110917777	110917777	+	Missense_Mutation	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPPA	4878	broad.mit.edu	37	1	11907500	11907500	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H3	10062	broad.mit.edu	37	11	47282902	47282902	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107790398	107790398	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603344	5603344	+	5'UTR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88484051	88484051	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337821	102337821	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28231964	28231964	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123515010	123515010	+	Silent	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50953477	50953477	+	Nonsense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFR	11054	broad.mit.edu	37	20	61444332	61444332	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70787503	70787503	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161953798	161953798	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLR1	4973	broad.mit.edu	37	12	10312555	10312555	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47754282	47754282	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C9	286362	broad.mit.edu	37	9	107380045	107380045	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13F1	138805	broad.mit.edu	37	9	107266855	107266855	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921238	247921238	+	Silent	SNP	G	T	T	rs41304161	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A9P	441295	broad.mit.edu	37	7	143982584	143982584	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128777	248128777	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29142112	29142112	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248100035	248100035	+	5'Flank	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248246930	248246930	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247835	248247835	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436317	248436317	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T3	343173	broad.mit.edu	37	1	248636972	248636972	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248525781	248525781	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55110712	55110712	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339546	55339546	+	5'Flank	DEL	T	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D2	124538	broad.mit.edu	37	17	56247253	56247253	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528375	20528375	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55406106	55406106	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A4	401666	broad.mit.edu	37	11	4968387	4968387	+	5'Flank	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661968	4661968	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E1	143503	broad.mit.edu	37	11	4674283	4674283	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4842747	4842747	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4843386	4843386	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G2	81282	broad.mit.edu	37	11	4936493	4936493	+	Missense_Mutation	SNP	G	T	T	rs148695983		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221548	5221548	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389409	4389409	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007894	6007894	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97888150	97888150	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579446	55579446	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M3	219482	broad.mit.edu	37	11	56237320	56237320	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56043707	56043707	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56043777	56043777	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55715043	55715043	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6T1	219874	broad.mit.edu	37	11	123814283	123814283	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904620	55904620	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38226663	38226663	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTC	5009	broad.mit.edu	37	X	38254969	38254969	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21739679	21739679	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP2	92736	broad.mit.edu	37	17	72926892	72926892	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOS	150677	broad.mit.edu	37	2	241079554	241079554	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVGP1	5016	broad.mit.edu	37	1	111962359	111962359	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXA1L	5018	broad.mit.edu	37	14	23237370	23237370	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX2	22953	broad.mit.edu	37	12	133196643	133196643	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI6	353238	broad.mit.edu	37	1	17725353	17725353	+	Intron	SNP	G	A	A	rs2489608		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	161990322	161990322	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVB	29780	broad.mit.edu	37	22	44515036	44515036	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX6	5080	broad.mit.edu	37	11	31811563	31811563	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55755538	55755538	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56138392	56138392	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82538323	82538323	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47783764	47783764	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165844813	165844813	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178863362	178863362	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72292014	72292014	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144882775	144882775	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55131107	55131107	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD4	57595	broad.mit.edu	37	X	153070738	153070738	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKP	5214	broad.mit.edu	37	10	3171996	3171996	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754640	49754640	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2L1	283209	broad.mit.edu	37	11	74065896	74065896	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA1	5255	broad.mit.edu	37	X	71855067	71855067	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGB	9488	broad.mit.edu	37	15	55626227	55626227	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17190358	17190358	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8770949	8770949	+	Translation_Start_Site	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111539486	111539486	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130846220	130846220	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25115791	25115791	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81181898	81181898	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110416734	110416734	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51882194	51882194	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51934486	51934486	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201291303	201291304	+	Intron	INS	-	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42379517	42379517	+	Missense_Mutation	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC1	10761	broad.mit.edu	37	X	133784951	133784951	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC8	51316	broad.mit.edu	37	4	84028990	84028990	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG1	5335	broad.mit.edu	37	20	39792419	39792419	+	Missense_Mutation	SNP	C	G	G	rs150381500		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2430207	2430207	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45568460	45568460	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131883346	131883346	+	Nonsense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131955526	131955526	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN4	729359	broad.mit.edu	37	19	4512005	4512005	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126707544	126707544	+	Silent	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126725054	126725054	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153694838	153694838	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131831114	131831114	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131913210	131913210	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50724601	50724601	+	Splice_Site	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153043162	153043162	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94676281	94676281	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72163128	72163128	+	Missense_Mutation	SNP	C	A	A	rs34703574		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118355819	118355819	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103916	53103916	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMC	5443	broad.mit.edu	37	2	25387719	25387719	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	132020885	132020885	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F2	5452	broad.mit.edu	37	19	42621606	42621606	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F4	5456	broad.mit.edu	37	X	82763626	82763626	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F4	5456	broad.mit.edu	37	X	82763897	82763897	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122273574	122273574	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57267741	57267741	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18822086	18822086	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27786528	27786528	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIE	10450	broad.mit.edu	37	1	40207001	40207001	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69046421	69046421	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82069963	82069963	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50189881	50189881	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF3	9129	broad.mit.edu	37	1	150300837	150300837	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTG	283659	broad.mit.edu	37	15	55916678	55916678	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTG	283659	broad.mit.edu	37	15	55964743	55964743	+	Silent	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43420611	43420611	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME2	5721	broad.mit.edu	37	14	24614206	24614206	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54114547	54114547	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209271877	209271877	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN2	5771	broad.mit.edu	37	18	12814257	12814257	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120725423	120725423	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3001866	3001866	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668779	198668779	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55708895	55708895	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157475567	157475567	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220164027	220164027	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40748600	40748600	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52336052	52336052	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXMP4	11264	broad.mit.edu	37	20	32307884	32307884	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158911940	158911940	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9310442	9310442	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRFPR	84109	broad.mit.edu	37	4	122291121	122291121	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32956353	32956353	+	Silent	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB12	201475	broad.mit.edu	37	18	8633065	8633065	+	Intron	DEL	A	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080375	103080375	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD17	5884	broad.mit.edu	37	5	68670537	68670537	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP2	729475	broad.mit.edu	37	2	17696481	17696481	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L3	5892	broad.mit.edu	37	17	33442286	33442286	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1025913	1025913	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4917441	4917441	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP	5909	broad.mit.edu	37	1	21936680	21936680	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12B	389677	broad.mit.edu	37	8	94747803	94747803	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REM1	28954	broad.mit.edu	37	20	30064325	30064326	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFNG	5986	broad.mit.edu	37	17	80007766	80007766	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107154838	107154838	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182638801	182638801	+	5'UTR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9	8787	broad.mit.edu	37	17	63200369	63200369	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB1	9886	broad.mit.edu	37	10	62648365	62648365	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHPN2	85415	broad.mit.edu	37	19	33490547	33490547	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	73026455	73026455	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104571594	104571595	+	Intron	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105001577	105001577	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF126	55658	broad.mit.edu	37	19	652940	652940	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25352513	25352513	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11484250	11484250	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117686772	117686772	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68910296	68910296	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53672256	53672256	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL19	6143	broad.mit.edu	37	17	37358530	37358530	+	Intron	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL23	9349	broad.mit.edu	37	17	37009251	37009251	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPN2	6185	broad.mit.edu	37	20	35860908	35860908	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS2	6187	broad.mit.edu	37	16	2016833	2016833	+	5'Flank	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP9	9136	broad.mit.edu	37	3	51968721	51968721	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSAD2	91543	broad.mit.edu	37	2	7035912	7035912	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38082184	38082184	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN1	6252	broad.mit.edu	37	14	60076923	60076923	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP2	344892	broad.mit.edu	37	3	187416656	187416656	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32365872	32365872	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38959805	38959805	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608538	237608538	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237801626	237801626	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237886367	237886367	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237944870	237944870	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237965074	237965074	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33822838	33822838	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB2	9667	broad.mit.edu	37	19	5587938	5587938	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB	6294	broad.mit.edu	37	19	5654318	5654318	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51176050	51176050	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408856	50408856	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD7	344658	broad.mit.edu	37	3	169650504	169650504	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148761494	148761494	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148840928	148840928	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARF2	91179	broad.mit.edu	37	22	20781790	20781790	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78218472	78218472	+	3'UTR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38763677	38763677	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167322326	167322326	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN3	79634	broad.mit.edu	37	2	175268882	175268882	+	Missense_Mutation	SNP	G	A	A	rs140532560		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243652408	243652408	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3658883	3658884	+	Intron	INS	-	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4169723	4169723	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71427815	71427815	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDPR	8436	broad.mit.edu	37	2	192700895	192700895	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDPR	8436	broad.mit.edu	37	2	192701129	192701129	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102256170	102256170	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169578723	169578723	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELT	51714	broad.mit.edu	37	3	150329498	150329498	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84636143	84636143	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61256071	61256071	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173878765	173878765	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179981574	179981574	+	Intron	DEL	A	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27306716	27306716	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70599217	70599217	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS16	11129	broad.mit.edu	37	19	45565286	45565286	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67206396	67206396	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156784800	156784800	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH3	283514	broad.mit.edu	37	13	46357452	46357452	+	3'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52033265	52033265	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838294	100838294	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838543	100838543	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1905548	1905548	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A3	8273	broad.mit.edu	37	X	153715937	153715937	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56916326	56916326	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60714150	60714150	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113471717	113471717	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A5	9121	broad.mit.edu	37	17	73094096	73094096	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25813412	25813412	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25777157	25777157	+	Missense_Mutation	SNP	C	G	G	rs142556117		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25777188	25777188	+	Splice_Site	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A7	6512	broad.mit.edu	37	1	53558282	53558282	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A1	6574	broad.mit.edu	37	2	113417307	113417307	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A1	6580	broad.mit.edu	37	6	160576922	160576922	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A7	10864	broad.mit.edu	37	6	43267478	43267478	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A3	151295	broad.mit.edu	37	2	220032797	220032797	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48921537	48921537	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A45	283130	broad.mit.edu	37	11	65146858	65146858	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A2	1836	broad.mit.edu	37	5	149357616	149357616	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92406044	92406044	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A10	81031	broad.mit.edu	37	20	45354645	45354645	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A8	29988	broad.mit.edu	37	9	130166264	130166264	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35E2	9906	broad.mit.edu	37	1	1666259	1666259	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A9	55334	broad.mit.edu	37	14	69909044	69909044	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75862347	75862347	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42338833	42338833	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A9	200010	broad.mit.edu	37	1	48690614	48690614	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A14	11254	broad.mit.edu	37	X	115568916	115568916	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110734898	110734898	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1233114	1233114	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103317507	103317507	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135067718	135067718	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B3	28234	broad.mit.edu	37	12	21015271	21015271	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20890206	20890206	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33849347	33849347	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164906575	164906575	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105750539	105750539	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11105642	11105642	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD2	6603	broad.mit.edu	37	17	61914849	61914849	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC3	9126	broad.mit.edu	37	10	112358132	112358132	+	Intron	SNP	C	G	G	rs78928775	byFrequency;by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88390404	88390404	+	Intron	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI1	6615	broad.mit.edu	37	20	48600833	48600833	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10280043	10280043	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139281868	139281868	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139291571	139291571	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25322144	25322144	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB1	6641	broad.mit.edu	37	8	121706136	121706136	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	953385	953385	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX8	29886	broad.mit.edu	37	7	2309172	2309172	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORD	6652	broad.mit.edu	37	15	45360327	45360327	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16010816	16010816	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231311581	231311581	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP8	221833	broad.mit.edu	37	7	20826321	20826321	+	Intron	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118571033	118571033	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118574205	118574205	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140358175	140358175	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA7	55812	broad.mit.edu	37	14	88893026	88893026	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35779385	35779385	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228883814	228883814	+	Missense_Mutation	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	229046284	229046284	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158650416	158650416	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131356466	131356466	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54855127	54855127	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRI	6717	broad.mit.edu	37	7	87839151	87839151	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153048509	153048509	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH1	54434	broad.mit.edu	37	12	109186491	109186491	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149497138	149497138	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR1	6751	broad.mit.edu	37	14	38679167	38679167	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48049142	48049142	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL5	8869	broad.mit.edu	37	2	86071714	86071714	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116612082	116612082	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA5	29906	broad.mit.edu	37	18	44266155	44266155	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123195227	123195227	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123210221	123210221	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33686964	33686964	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3NL	83930	broad.mit.edu	37	7	38247244	38247244	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT6	6778	broad.mit.edu	37	12	57501925	57501925	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP2	261729	broad.mit.edu	37	7	89859319	89859319	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP3	55240	broad.mit.edu	37	2	120002952	120002952	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63965045	63965045	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5170126	5170126	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP4	252983	broad.mit.edu	37	17	53089389	53089389	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2A1	6822	broad.mit.edu	37	19	48382479	48382479	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	888327	888327	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109332487	109332487	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE1	93426	broad.mit.edu	37	10	135369500	135369500	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152542080	152542080	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152623136	152623136	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152658015	152658015	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152698106	152698106	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT15	83849	broad.mit.edu	37	10	46967663	46967663	+	Silent	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT8	90019	broad.mit.edu	37	11	1857722	1857722	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85445402	85445402	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70627911	70627911	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF9B	51616	broad.mit.edu	37	X	77395109	77395109	+	5'UTR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TALDO1	6888	broad.mit.edu	37	11	763637	763637	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160053090	160053090	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6636364	6636364	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D29	26083	broad.mit.edu	37	17	28885908	28885908	+	5'Flank	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101648716	101648716	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCK	93627	broad.mit.edu	37	4	107156448	107156448	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBK1	29110	broad.mit.edu	37	12	64875778	64875778	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85448333	85448333	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX21	30009	broad.mit.edu	37	17	45822368	45822368	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX4	9496	broad.mit.edu	37	17	59560847	59560847	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102529194	102529194	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB1	6921	broad.mit.edu	37	8	74868148	74868148	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET2	54790	broad.mit.edu	37	4	106158576	106158576	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50807830	50807830	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFE3	7030	broad.mit.edu	37	X	48896622	48896622	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92262969	92262969	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177192	89177192	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177194	89177194	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122767957	122767957	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138169390	138169390	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TINAG	27283	broad.mit.edu	37	6	54219385	54219385	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164394955	164394955	+	5'UTR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171910423	171910423	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476015	120476015	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64882402	64882402	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64883357	64883357	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF4	9777	broad.mit.edu	37	20	30730905	30730905	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106B	54664	broad.mit.edu	37	7	12271647	12271647	+	3'UTR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44693352	44693352	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM121	80757	broad.mit.edu	37	14	105995420	105995420	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98392318	98392318	+	Silent	SNP	C	T	T	rs61745536	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42827820	42827820	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161B	153396	broad.mit.edu	37	5	87502892	87502892	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM188	255919	broad.mit.edu	37	16	50059527	50059527	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15430192	15430192	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55B	90809	broad.mit.edu	37	14	20927676	20927676	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS9	360200	broad.mit.edu	37	19	2396584	2396584	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57080055	57080055	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74905351	74905351	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175087663	175087663	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175113401	175113401	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175355112	175355112	+	Intron	SNP	G	T	T	rs138725581	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175365812	175365813	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218713343	218713343	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39658162	39658162	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7576855	7576855	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1488335	1488335	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186344160	186344160	+	Missense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20056582	20056582	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910328	10910328	+	Silent	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10969173	10969173	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71495976	71495976	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36871021	36871021	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHR	7201	broad.mit.edu	37	8	110131489	110131489	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROAP	10024	broad.mit.edu	37	12	49724266	49724266	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72987748	72987748	+	5'UTR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101359573	101359573	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234891605	234891605	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16332321	16332321	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRY6	154754	broad.mit.edu	37	7	142481923	142481925	+	Intron	DEL	CAA	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	52037993	52037993	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769817	31769817	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN5	10098	broad.mit.edu	37	4	99579208	99579208	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK1	84630	broad.mit.edu	37	6	43220674	43220674	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL12	23170	broad.mit.edu	37	22	43569686	43569686	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19751104	19751104	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190905449	190905449	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93890	93890	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139564044	139564044	+	Silent	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41864678	41864678	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88911910	88911910	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	89028412	89028412	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43829506	43829506	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397907	125397907	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69693379	69693379	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70146539	70146540	+	Missense_Mutation	DNP	AT	TC	TC			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70352326	70352326	+	Splice_Site	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17752261	17752261	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35376131	35376131	+	Missense_Mutation	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35386117	35386117	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96090406	96090407	+	Frame_Shift_Ins	INS	-	CC	CC			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126211293	126211293	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216262525	216262525	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30415949	30415949	+	Intron	DEL	T	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640280	57640280	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30213073	30213073	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	15050024	15050024	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39006236	39006236	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54171614	54171614	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172545	54172545	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	60897195	60897195	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	72149248	72149248	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	101079869	101079869	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	118704585	118704585	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122489683	122489683	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	133734727	133734727	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	133734872	133734872	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51435987	51435987	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55198329	55198329	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56064618	56064618	+	IGR	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6067594	6067594	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6067596	6067596	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67503908	67503908	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89718222	89718222	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94389693	94389693	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10659469	10659469	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33139991	33139991	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44054266	44054266	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	48563388	48563388	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	49469542	49469542	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53125534	53125534	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	113803940	113803940	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19702108	19702108	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	41301937	41301937	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	56574550	56574550	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807185	19807185	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20677944	20677944	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39685340	39685340	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45972276	45972276	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	51171642	51171642	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59602721	59602721	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	99439541	99439541	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21369227	21369227	+	IGR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22784314	22784314	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22784455	22784455	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50086400	50086400	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616146	32616146	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33372801	33372801	+	IGR	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33379923	33379923	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33412778	33412778	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33741029	33741029	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33816201	33816202	+	IGR	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	61089827	61089827	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26081657	26081657	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	54650398	54650398	+	IGR	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60338022	60338022	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	13140069	13140069	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	26231820	26231820	+	IGR	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	84174	84174	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434442	106434442	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111557514	111557514	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120114527	120114527	+	IGR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121485200	121485200	+	IGR	SNP	T	A	A	rs4787544		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903557	148903557	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149062258	149062258	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149094426	149094427	+	IGR	DNP	CC	AA	AA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149726063	149726063	+	IGR	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158165772	158165772	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115199	191115199	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	229857404	229857404	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	240137308	240137309	+	IGR	DNP	CG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	45457537	45457537	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96912658	96912658	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10366498	10366498	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	13829928	13829928	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	31661528	31661528	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181615	11181615	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28515918	28515918	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31635748	31635748	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16404839	16404839	+	IGR	DEL	A	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	23265110	23265110	+	IGR	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	29819002	29819002	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	128005820	128005820	+	IGR	SNP	T	A	A	rs142742762	by1000genomes	TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130989197	130989197	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17466153	17466154	+	IGR	INS	-	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176707894	176707894	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176707897	176707897	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052992	195052992	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222828178	222828178	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91795479	91795479	+	IGR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91795638	91795638	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800572	91800572	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872852	91872852	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92316255	92316255	+	IGR	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12892132	12892133	+	IGR	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147308818	147308818	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163413075	163413075	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580761	18580761	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35257585	35257585	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97941177	97941177	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	10413256	10413256	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111336995	111336995	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130057990	130057990	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058987	130058987	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189659674	189659674	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190394522	190394522	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4896844	4896844	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	49637616	49637616	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9711615	9711615	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	163136240	163136240	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304840	20304840	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20305519	20305519	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	57574060	57574060	+	IGR	SNP	T	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84845408	84845408	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	92603728	92603728	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97549685	97549685	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	28937558	28937558	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3179245	3179245	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64326064	64326064	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66547533	66547533	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	105766109	105766109	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	131346980	131346980	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16624074	16624074	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20622240	20622240	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358804	56358805	+	IGR	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56431247	56431247	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57485047	57485048	+	IGR	DNP	GG	TT	TT			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62669737	62669737	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63029320	63029320	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63033680	63033680	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84506231	84506231	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766678	9766678	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	115580366	115580366	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125934201	125934201	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	144147335	144147335	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43528137	43528137	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	63056951	63056951	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	71418691	71418691	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73126430	73126430	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	76289180	76289180	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82539086	82539086	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110802523	110802523	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	125316493	125316493	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	125524636	125524636	+	IGR	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	19461338	19461338	+	IGR	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44093206	44093206	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	79164465	79164465	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	119345431	119345431	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	133407638	133407638	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139479645	139479645	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	14262943	14262943	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	143923128	143923128	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	23093913	23093913	+	IGR	DEL	G	-	-			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27536492	27536492	+	IGR	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	39647283	39647283	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46299676	46299676	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47663902	47663902	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47663904	47663904	+	IGR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75555294	75555294	+	IGR	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79829963	79829963	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351926	87351926	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294255	89294255	+	IGR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92748730	92748730	+	IGR	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13524673	13524673	+	IGR	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX1	11023	broad.mit.edu	37	10	118897512	118897512	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100182372	100182372	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12337880	12337880	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6131273	6131273	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR33	55339	broad.mit.edu	37	2	128466954	128466954	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54398577	54398577	+	Intron	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR88	126248	broad.mit.edu	37	19	33642041	33642041	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134225219	134225219	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68659930	68659930	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKRX	402415	broad.mit.edu	37	X	100183084	100183084	+	Silent	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128881584	128881584	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167086434	167086434	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130131495	130131495	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47587514	47587514	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113089652	113089652	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111625057	111625058	+	Intron	DNP	CC	AA	AA			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW1	55063	broad.mit.edu	37	7	100016710	100016710	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC3	51304	broad.mit.edu	37	3	44986781	44986781	+	Missense_Mutation	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZER1	10444	broad.mit.edu	37	9	131502332	131502332	+	Silent	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZER1	10444	broad.mit.edu	37	9	131513632	131513632	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72026208	72026208	+	Silent	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72821618	72821618	+	Silent	SNP	A	G	G	rs112443847		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77763493	77763493	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP2	80108	broad.mit.edu	37	5	178336849	178336849	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX2	22882	broad.mit.edu	37	8	123963750	123963750	+	5'UTR	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147114033	147114033	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN5	23660	broad.mit.edu	37	7	99129089	99129089	+	Nonsense_Mutation	SNP	T	A	A	rs28411998		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF133	7692	broad.mit.edu	37	20	18286371	18286371	+	Missense_Mutation	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27435611	27435611	+	Intron	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF235	9310	broad.mit.edu	37	19	44792248	44792248	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF266	10781	broad.mit.edu	37	19	9524200	9524200	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF34	80778	broad.mit.edu	37	8	145998963	145998963	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF445	353274	broad.mit.edu	37	3	44496980	44496980	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF461	92283	broad.mit.edu	37	19	37130585	37130585	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109687218	109687218	+	Missense_Mutation	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10445318	10445318	+	Missense_Mutation	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9578911	9578911	+	Nonsense_Mutation	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF594	84622	broad.mit.edu	37	17	5084382	5084382	+	3'UTR	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF599	148103	broad.mit.edu	37	19	35258221	35258221	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF616	90317	broad.mit.edu	37	19	52619984	52619984	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71577285	71577285	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF641	121274	broad.mit.edu	37	12	48737288	48737288	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF774	342132	broad.mit.edu	37	15	90903397	90903397	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802769	185802769	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53989742	53989742	+	Intron	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829644	57829644	+	Missense_Mutation	SNP	T	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47881208	47881208	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47886771	47886771	+	Silent	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238048492	238048492	+	Silent	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58564794	58564794	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187692918	187692918	+	Missense_Mutation	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	51807834	51807834	+	Intron	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31128276	31128276	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31284361	31284361	+	Silent	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80762012	80762012	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101521894	101521894	+	5'Flank	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22314934	22314934	+	Intron	SNP	C	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102318321	102318321	+	5'Flank	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76074505	76074505	+	Missense_Mutation	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16722013	16722013	+	Intron	SNP	A	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16835921	16835921	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	20729770	20729770	+	5'Flank	SNP	G	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	12163790	12163790	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186671625	186671625	+	Intron	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417281	89417281	+	Splice_Site	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121685	90121685	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121955	90121955	+	RNA	SNP	T	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90193453	90193453	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538467	180538467	+	Intron	SNP	A	C	C			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538729	180538729	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9710409	9710409	+	5'Flank	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	150227359	150227359	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100607646	100607646	+	Intron	DEL	T	-	-	rs4989163		TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142001010	142001010	+	Missense_Mutation	SNP	G	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142021051	142021051	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142149188	142149188	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142334729	142334729	+	Intron	SNP	C	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143447543	143447543	+	Intron	SNP	G	T	T			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64321989	64321989	+	Intron	SNP	A	G	G			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40691615	40691615	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17134859	17134859	+	Intron	SNP	C	A	A			TCGA-49-6767-01A-11D-1855-08	TCGA-49-6767-11A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
