Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
APPL2	55198	genome.wustl.edu	37	12	105570747	105570747	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	12	105570747	105570747	C	G	SNP	APPL2	NM_018171.3	human	genbank	58_37c	-1	validated	missense	c.1719	p.K573N	1.000	HMMPfam_PID,superfamily_SSF50729	HMMPfam_PH,HMMSmart_PH,HMMPfam_PID,superfamily_SSF50729	-	no_errors
CAMSAP1	157922	genome.wustl.edu	37	9	138714311	138714311	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	9	138714311	138714311	A	T	SNP	CAMSAP1	NM_015447.3	human	genbank	58_37c	-1	validated	silent	c.2196	p.T732	0.000	NULL	superfamily_PRC-barrel domain,HMMPfam_DUF1781,superfamily_Calponin-homology domain CH-domain	-	no_errors
CAPN1	823	genome.wustl.edu	37	11	64953422	64953422	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	11	64953422	64953422	T	C	SNP	CAPN1	NM_005186.2	human	genbank	58_37c	+1	reviewed	missense	c.491	p.V164A	1.000	HMMPfam_Peptidase_C2,HMMSmart_CysPc,superfamily_SSF54001	PatternScan_THIOL_PROTEASE_CYS,PatternScan_THIOL_PROTEASE_HIS,PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Peptidase_C2,HMMPfam_Calpain_III,HMMSmart_CysPc,HMMSmart_calpain_III,superfamily_Peptidase_C2,HMMSmart_EFh,PatternScan_EF_HAND_1,superfamily_SSF47473,superfamily_SSF54001	-	no_errors
CCDC120	90060	genome.wustl.edu	37	X	48924824	48924824	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	X	48924824	48924824	C	T	SNP	CCDC120	NM_033626.2	human	genbank	58_37c	+1	reviewed	missense	c.1069	p.R357C	1.000	NULL	NULL	-	no_errors
CD2	914	genome.wustl.edu	37	1	117311091	117311091	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	1	117311091	117311091	G	T	SNP	CD2	NM_001767.3	human	genbank	58_37c	+1	validated	nonsense	c.742	p.E248*	0.823	NULL	HMMPfam_C2-set,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
CHD1L	9557	genome.wustl.edu	37	1	146724328	146724328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	1	146724328	146724328	C	T	SNP	CHD1L	NM_004284.3	human	genbank	58_37c	+1	validated	missense	c.178	p.R60C	0.777	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CSNK1A1L	122011	genome.wustl.edu	37	13	37678520	37678520	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	13	37678520	37678520	A	G	SNP	CSNK1A1L	NM_145203.5	human	genbank	58_37c	-1	validated	missense	c.874	p.Y292H	1.000	superfamily_Kinase_like	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CYP24A1	1591	genome.wustl.edu	37	20	52789446	52789446	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	20	52789446	52789446	A	T	SNP	CYP24A1	NM_000782.4	human	genbank	58_37c	-1	reviewed	splice_site	c.449+2	e2+2	1.000	-	-	-	no_errors
ELL2	22936	genome.wustl.edu	37	5	95234058	95234064	+	Frame_Shift_Del	DEL	CCTTATG	CCTTATG	-	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	CCTTATG	CCTTATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	5	95234058	95234064	CCTTATG	-	DEL	ELL2	NM_012081.5	human	genbank	58_37c	-1	validated	frame_shift_del	c.1411_1405	p.H469fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_Occludin_ELL,HMMPfam_ELL	-	no_errors
ENSG00000136149	0	genome.wustl.edu	37	13	55015392	55015392	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	13	55015392	55015392	G	A	SNP	LOC100287887	XM_002343241.1	human	genbank	58_37c	-1	model	missense	c.59	p.A20V	0.995	HMMPfam_Ribosomal_L13,superfamily_Ribosomal_L13	HMMPfam_Ribosomal_L13,superfamily_Ribosomal_L13	-	pseudogene
FAM86D	692099	genome.wustl.edu	37	3	75471725	75471725	+	RNA	SNP	A	A	G	rs58659934	by1000genomes	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	3	75471725	75471725	A	G	SNP	FAM86DP	NR_024241.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
FAT1	2195	genome.wustl.edu	37	4	187524066	187524066	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	4	187524066	187524066	G	A	SNP	FAT1	NM_005245.3	human	genbank	58_37c	-1	reviewed	nonsense	c.11473	p.Q3825*	0.685	HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
GTF2IRD2	84163	genome.wustl.edu	37	7	74234113	74234113	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	7	74234113	74234113	T	C	SNP	GTF2IRD2	NM_173537.2	human	genbank	58_37c	-1	validated	missense	c.641	p.N214S	0.131	NULL	HMMPfam_GTF2I	-	no_errors
HIST2H2AC	8338	genome.wustl.edu	37	1	149858866	149858866	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	1	149858866	149858866	C	G	SNP	HIST2H2AC	NM_003517.2	human	genbank	58_37c	+1	reviewed	silent	c.342	p.A114	0.990	HMMSmart_SM00414,superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HSD17B4	3295	genome.wustl.edu	37	5	118860980	118860980	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	5	118860980	118860980	G	-	DEL	HSD17B4	NM_000414.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1573	p.G525fs	1.000	HMMPfam_MaoC_dehydratas,superfamily_SSF54637	HMMPfam_adh_short,PatternScan_ADH_SHORT,HMMPfam_MaoC_dehydratas,HMMPfam_SCP2,superfamily_NAD(P)-bd,superfamily_SCP2,superfamily_SSF54637	-	no_errors
KIAA0947	23379	genome.wustl.edu	37	5	5457514	5457514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	5	5457514	5457514	G	A	SNP	KIAA0947	NM_015325.1	human	genbank	58_37c	+1	validated	missense	c.761	p.G254D	0.000	NULL	NULL	-	no_errors
KRTAP13-4	284827	genome.wustl.edu	37	21	31802736	31802736	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	21	31802736	31802736	A	G	SNP	KRTAP13-4	NM_181600.1	human	genbank	58_37c	+1	provisional	missense	c.143	p.Y48C	0.025	HMMPfam_PMG	HMMPfam_PMG	-	no_errors
LBR	3930	genome.wustl.edu	37	1	225592382	225592382	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	1	225592382	225592382	C	T	SNP	LBR	NM_002296.2	human	genbank	58_37c	-1	reviewed	missense	c.1510	p.A504T	1.000	HMMPfam_ERG4_ERG24	HMMPfam_ERG4_ERG24,HMMSmart_TUDOR,PatternScan_STEROL_REDUCT_1,PatternScan_STEROL_REDUCT_2,HMMPfam_LBR_tudor	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151845282	151845283	+	Frame_Shift_Del	DEL	GG	GG	-	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	GG	GG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	7	151845282	151845283	GG	-	DEL	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.13730_13729	p.P4577fs	1.000:1.000	HMMPfam_FYRN,HMMSmart_SM00541	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
NCR2	9436	genome.wustl.edu	37	6	41304105	41304105	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	6	41304105	41304105	C	A	SNP	NCR2	NM_004828.3	human	genbank	58_37c	+1	validated	silent	c.333	p.I111	0.001	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
OR4K14	122740	genome.wustl.edu	37	14	20482985	20482985	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	14	20482985	20482985	C	G	SNP	OR4K14	NM_001004712.1	human	genbank	58_37c	-1	provisional	missense	c.368	p.R123T	0.999	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	byCluster	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1633	p.E545K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
RTN4RL1	146760	genome.wustl.edu	37	17	1839853	1839853	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	17	1839853	1839853	C	T	SNP	RTN4RL1	NM_178568.2	human	genbank	58_37c	-1	validated	silent	c.1263	p.S421	0.858	NULL	HMMPfam_LRRNT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
SCN8A	6334	genome.wustl.edu	37	12	52115519	52115519	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	12	52115519	52115519	G	A	SNP	SCN8A	NM_014191.2	human	genbank	58_37c	+1	reviewed	missense	c.1825	p.E609K	0.999	NULL	HMMPfam_IQ,HMMSmart_SM00015,PatternScan_ODR_DC_2_1,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SH3BP1	23616	genome.wustl.edu	37	22	38037425	38037425	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	22	38037425	38037425	C	G	SNP	SH3BP1	NM_018957.3	human	genbank	58_37c	+1	validated	missense	c.147	p.I49M	0.940	HMMPfam_BAR,HMMSmart_SM00721	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_BAR,HMMSmart_SM00721,superfamily_GTPase activation domain GAP	-	no_errors
SHARPIN	81858	genome.wustl.edu	37	8	145154196	145154196	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	8	145154196	145154196	A	C	SNP	SHARPIN	NM_030974.3	human	genbank	58_37c	-1	validated	silent	c.906	p.A302	0.896	superfamily_Ubiquitin-like	HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_Ubiquitin-like,superfamily_NZF domain	-	no_errors
SLC1A4	6509	genome.wustl.edu	37	2	65243809	65243809	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	2	65243809	65243809	T	C	SNP	SLC1A4	NM_003038.3	human	genbank	58_37c	+1	validated	splice_site	c.1034+2	e5+2	1.000	-	-	-	no_errors
SNRNP200	23020	genome.wustl.edu	37	2	96956114	96956114	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	2	96956114	96956114	G	A	SNP	SNRNP200	NM_014014.3	human	genbank	58_37c	-1	reviewed	missense	c.2692	p.P898S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_Sec63,HMMPfam_DEAD,HMMSmart_SM00487,HMMSmart_SM00611,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TACC1	6867	genome.wustl.edu	37	8	38684873	38684873	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	8	38684873	38684873	C	T	SNP	TACC1	NM_006283.2	human	genbank	58_37c	+1	reviewed	missense	c.1640	p.A547V	0.998	NULL	HMMPfam_TACC	-	no_errors
TMEM47	83604	genome.wustl.edu	37	X	34674970	34674970	+	Silent	SNP	C	C	G	rs5928617	byCluster;byFrequency;by1000genomes	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	X	34674970	34674970	C	G	SNP	TMEM47	NM_031442.3	human	genbank	58_37c	-1	reviewed	silent	c.177	p.R59	1.000	NULL	NULL	-	no_errors
USP15	9958	genome.wustl.edu	37	12	62784642	62784642	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	12	62784642	62784642	A	C	SNP	USP15	NM_006313.1	human	genbank	58_37c	+1	provisional	splice_site	c.1758-2	e14-2	1.000	-	-	-	no_errors
WIPF3	644150	genome.wustl.edu	37	7	29923974	29923974	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0XP-01A-11D-A117-09	TCGA-AN-A0XP-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6179b498-2cea-4f7a-82a8-b7ec71431ea8	6c4eee86-8839-4a74-a786-b37e7dd35b21	7	29923974	29923974	G	A	SNP	WIPF3	ENST00000242140	human	ensembl	58_37c	+1	known	silent	c.864	p.E288	0.001	NULL	HMMPfam_WH2,HMMSmart_WH2	-	no_errors
