Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
BDP1	55814	genome.wustl.edu	37	5	70818170	70818170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	5	70818170	70818170	C	T	SNP	BDP1	NM_018429.2	human	genbank	58_37c	+1	reviewed	silent	c.5046	p.F1682	0.993	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,PatternScan_DNA_LIGASE_A1	-	no_errors
C20orf185	359710	genome.wustl.edu	37	20	31659972	31659972	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	20	31659972	31659972	C	T	SNP	C20orf185	NM_182658.1	human	genbank	58_37c	+1	provisional	silent	c.1323	p.N441	0.956	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,HMMPfam_LBP_BPI_CETP,HMMSmart_BPI1,superfamily_Bactericidal_perm-incr_a/b_dom,PatternScan_LBP_BPI_CETP	-	no_errors
C5orf44	80006	genome.wustl.edu	37	5	64957916	64957916	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	5	64957916	64957916	A	G	SNP	C5orf44	NM_001093755.1	human	genbank	58_37c	+1	validated	missense	c.937	p.I313V	1.000	NULL	HMMPfam_DUF974	-	no_errors
CHD4	1108	genome.wustl.edu	37	12	6701926	6701926	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	12	6701926	6701926	G	T	SNP	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	missense	c.2710	p.P904T	1.000	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
COL13A1	1305	genome.wustl.edu	37	10	71665573	71665573	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	71665573	71665573	C	T	SNP	COL13A1	NM_001130103.1	human	genbank	58_37c	+1	reviewed	missense	c.946	p.R316W	1.000	NULL	HMMPfam_Collagen	-	no_errors
CPA6	57094	genome.wustl.edu	37	8	68346441	68346441	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	8	68346441	68346441	T	C	SNP	CPA6	NM_020361.4	human	genbank	58_37c	-1	validated	silent	c.873	p.T291	0.010	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases	HMMPfam_Peptidase_M14,HMMSmart_SM00631,PatternScan_CARBOXYPEPT_ZN_2,HMMPfam_Propep_M14,superfamily_Protease propeptides/inhibitors,superfamily_Zn-dependent exopeptidases	-	no_errors
FAT2	2196	genome.wustl.edu	37	5	150946277	150946277	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	5	150946277	150946277	G	C	SNP	FAT2	NM_001447.2	human	genbank	58_37c	-1	reviewed	missense	c.2216	p.A739G	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
FFAR3	2865	genome.wustl.edu	37	19	35850292	35850292	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	19	35850292	35850292	G	C	SNP	FFAR3	NM_005304.3	human	genbank	58_37c	+1	validated	missense	c.500	p.G167A	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
GALNT10	55568	genome.wustl.edu	37	5	153795448	153795448	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	5	153795448	153795448	G	A	SNP	GALNT10	NM_198321.3	human	genbank	58_37c	+1	reviewed	missense	c.1609	p.D537N	1.000	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GRIN3A	116443	genome.wustl.edu	37	9	104499565	104499565	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	9	104499565	104499565	G	C	SNP	GRIN3A	NM_133445.2	human	genbank	58_37c	-1	reviewed	missense	c.697	p.Q233E	1.000	superfamily_SSF53822	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
HERC4	26091	genome.wustl.edu	37	10	69692462	69692462	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	69692462	69692462	C	T	SNP	HERC4	NM_022079.2	human	genbank	58_37c	-1	validated	silent	c.2754	p.A918	0.995	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,superfamily_RCC1/BLIP-II	-	no_errors
HIATL1	84641	genome.wustl.edu	37	9	97203308	97203308	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	9	97203308	97203308	T	G	SNP	HIATL1	NM_032558.2	human	genbank	58_37c	+1	validated	missense	c.437	p.V146G	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	PatternScan_SUGAR_TRANSPORT_1,HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
IDI1	3422	genome.wustl.edu	37	10	1088646	1088646	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	1088646	1088646	C	T	SNP	IDI1	NM_004508.2	human	genbank	58_37c	-1	validated	missense	c.463	p.E155K	1.000	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase	-	no_errors
IKZF5	64376	genome.wustl.edu	37	10	124753899	124753899	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	124753899	124753899	G	A	SNP	IKZF5	NM_022466.5	human	genbank	58_37c	-1	provisional	silent	c.657	p.I219	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
INTS8	55656	genome.wustl.edu	37	8	95869095	95869095	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	8	95869095	95869095	A	G	SNP	INTS8	NM_017864.2	human	genbank	58_37c	+1	provisional	missense	c.1843	p.M615V	1.000	NULL	NULL	-	no_errors
ITGA7	3679	genome.wustl.edu	37	12	56092319	56092319	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	12	56092319	56092319	C	T	SNP	ITGA7	NM_001144996.1	human	genbank	58_37c	-1	reviewed	missense	c.1052	p.R351H	1.000	HMMPfam_FG-GAP,HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain	HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_SM00191,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_Integrin domains,superfamily_Integrin alpha N-terminal domain	-	no_errors
ITPK1	3705	genome.wustl.edu	37	14	93412768	93412768	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	14	93412768	93412768	C	A	SNP	ITPK1	NM_001142593.1	human	genbank	58_37c	-1	validated	missense	c.809	p.R270L	1.000	HMMPfam_Ins134_P3_kin,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_Ins134_P3_kin,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
KIAA1109	84162	genome.wustl.edu	37	4	123268873	123268873	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	4	123268873	123268873	C	G	SNP	KIAA1109	NM_015312.3	human	genbank	58_37c	+1	reviewed	missense	c.13068	p.S4356R	1.000	NULL	PatternScan_ASP_PROTEASE,HMMPfam_FSA_C	-	no_errors
MYO1G	64005	genome.wustl.edu	37	7	45006283	45006283	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	7	45006283	45006283	C	T	SNP	MYO1G	NM_033054.2	human	genbank	58_37c	-1	validated	missense	c.1937	p.R646Q	0.996	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_TH1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYOF	26509	genome.wustl.edu	37	10	95191210	95191210	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	95191210	95191210	C	T	SNP	MYOF	NM_013451.3	human	genbank	58_37c	-1	reviewed	silent	c.300	p.P100	0.072	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00693,HMMSmart_SM00694,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerA,HMMPfam_FerB,HMMPfam_FerI	-	no_errors
NTRK2	4915	genome.wustl.edu	37	9	87570325	87570325	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	9	87570325	87570325	G	A	SNP	NTRK2	NM_006180.3	human	genbank	58_37c	+1	reviewed	missense	c.2065	p.V689M	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_LRR_1,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_IGc2,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_I-set,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
PSMD3	5709	genome.wustl.edu	37	17	38145029	38145029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	17	38145029	38145029	G	T	SNP	PSMD3	NM_002809.2	human	genbank	58_37c	+1	reviewed	missense	c.643	p.A215S	0.978	superfamily_TPR-like	"HMMPfam_PCI,HMMSmart_SM00088,HMMSmart_SM00753,HMMPfam_Rpn3_C,superfamily_""Winged helix"" DNA-binding domain,superfamily_TPR-like"	-	no_errors
RGS22	26166	genome.wustl.edu	37	8	101020624	101020624	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	8	101020624	101020624	C	T	SNP	RGS22	NM_015668.3	human	genbank	58_37c	-1	validated	silent	c.2340	p.S780	0.992	superfamily_Regulator of G-protein signaling RGS	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS	-	no_errors
RILPL1	353116	genome.wustl.edu	37	12	124008109	124008109	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	12	124008109	124008109	C	T	SNP	RILPL1	NM_178314.3	human	genbank	58_37c	-1	validated	silent	c.393	p.K131	0.999	HMMPfam_Jnk-SapK_ap_N	HMMPfam_Jnk-SapK_ap_N	-	no_errors
SPAG16	79582	genome.wustl.edu	37	2	214181974	214181974	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	2	214181974	214181974	C	T	SNP	SPAG16	NM_024532.3	human	genbank	58_37c	+1	validated	missense	c.430	p.L144F	0.007	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
SYNE1	23345	genome.wustl.edu	37	6	152551687	152551687	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	6	152551687	152551687	A	T	SNP	SYNE1	NM_182961.2	human	genbank	58_37c	-1	reviewed	missense	c.21190	p.C7064S	1.000	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
TBCEL	219899	genome.wustl.edu	37	11	120925823	120925823	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	11	120925823	120925823	G	A	SNP	TBCEL	NM_001130047.1	human	genbank	58_37c	+1	validated	missense	c.518	p.C173Y	1.000	superfamily_SSF52047	PatternScan_UBIQUITIN_1,superfamily_SSF52047,superfamily_SSF54236	-	no_errors
WDR78	79819	genome.wustl.edu	37	1	67306238	67306238	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	1	67306238	67306238	C	T	SNP	WDR78	NM_024763.4	human	genbank	58_37c	-1	validated	missense	c.1408	p.A470T	0.997	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
XPO4	64328	genome.wustl.edu	37	13	21357913	21357914	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	13	21357913	21357914	TT	-	DEL	XPO4	NM_022459.4	human	genbank	58_37c	-1	validated	frame_shift_del	c.3404_3403	p.K1135fs	1.000:1.000	NULL	superfamily_ARM-type_fold	-	no_errors
ZBED4	9889	genome.wustl.edu	37	22	50277363	50277363	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	22	50277363	50277363	A	T	SNP	ZBED4	NM_014838.2	human	genbank	58_37c	+1	validated	missense	c.53	p.D18V	0.070	NULL	HMMPfam_zf-BED,HMMSmart_SM00614,HMMPfam_hATC	-	no_errors
ZNF438	220929	genome.wustl.edu	37	10	31139222	31139222	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	10	31139222	31139222	C	-	DEL	ZNF438	NM_001143766.1	human	genbank	58_37c	-1	validated	frame_shift_del	c.112	p.A38fs	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF620	253639	genome.wustl.edu	37	3	40554007	40554007	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-AO-A12E-01A-11D-A10M-09	TCGA-AO-A12E-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b3990b59-e2f4-4759-8eb0-11ad3c34ac50	6158f7a6-f20f-48ec-ae6d-657f09f9a6f0	3	40554007	40554007	G	T	SNP	ZNF620	NM_175888.2	human	genbank	58_37c	+1	validated	splice_site	c.265+1	e3+1	0.919	-	-	-	no_errors
