Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
A2M	2	genome.wustl.edu	37	12	9256962	9256962	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	12	9256962	9256962	G	T	SNP	A2M	NM_000014.4	human	genbank	58_37c	-1	reviewed	missense	c.1139	p.P380Q	0.957	NULL	HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain,PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors
AIM1	202	genome.wustl.edu	37	6	107016426	107016426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	6	107016426	107016426	G	A	SNP	AIM1	NM_001624.2	human	genbank	58_37c	+1	validated	missense	c.5157	p.M1719I	1.000	NULL	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_RicinB_like,superfamily_G_crystallin_SF	-	no_errors
ANKRD30B	374860	genome.wustl.edu	37	18	14763786	14763786	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	18	14763786	14763786	C	G	SNP	ANKRD30B	NM_001145029.1	human	genbank	58_37c	+1	validated	missense	c.922	p.R308G	0.012	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ATP4A	495	genome.wustl.edu	37	19	36051300	36051300	+	Missense_Mutation	SNP	C	C	T	rs144661332	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	36051300	36051300	C	T	SNP	ATP4A	NM_000704.2	human	genbank	58_37c	-1	reviewed	missense	c.752	p.R251H	1.000	HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF81665	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,HMMPfam_H-K_ATPase_N,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660,superfamily_SSF81665	-	no_errors
B3GALT2	8707	genome.wustl.edu	37	1	193150454	193150454	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	193150454	193150454	C	T	SNP	B3GALT2	NM_003783.3	human	genbank	58_37c	-1	reviewed	missense	c.239	p.R80Q	1.000	NULL	HMMPfam_Galactosyl_T	-	no_errors
C17orf77	146723	genome.wustl.edu	37	17	72588188	72588188	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	17	72588188	72588188	G	T	SNP	C17orf77	NM_152460.2	human	genbank	58_37c	+1	validated	missense	c.3	p.M1I	0.000	NULL	NULL	-	no_errors
C1orf212	113444	genome.wustl.edu	37	1	35321061	35321069	+	In_Frame_Del	DEL	AGATGCCTG	AGATGCCTG	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	AGATGCCTG	AGATGCCTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	35321061	35321069	AGATGCCTG	-	DEL	C1orf212	NM_138428.5	human	genbank	58_37c	-1	validated	in_frame_del	c.221_213	p.RHL72in_frame_del	0.001:0.002:0.003:0.004:0.126:0.255:0.260:0.040:0.029	NULL	NULL	-	no_errors
CATSPER4	378807	genome.wustl.edu	37	1	26527420	26527420	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	26527420	26527420	G	A	SNP	CATSPER4	NM_198137.1	human	genbank	58_37c	+1	validated	missense	c.1087	p.G363R	0.003	NULL	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CCDC84	338657	genome.wustl.edu	37	11	118869807	118869807	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	118869807	118869807	A	G	SNP	CCDC84	NM_198489.1	human	genbank	58_37c	+1	provisional	missense	c.371	p.Q124R	0.789	NULL	NULL	-	no_errors
CD2BP2	10421	genome.wustl.edu	37	16	30365584	30365585	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	16	30365584	30365585	AG	-	DEL	CD2BP2	NM_006110.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.138_137	p.S46fs	0.998:1.000	NULL	HMMPfam_GYF,HMMSmart_SM00444,superfamily_GYF domain	-	no_errors
CDC42BPB	9578	genome.wustl.edu	37	14	103416191	103416191	+	Silent	SNP	G	G	T	rs148759838	byFrequency	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	14	103416191	103416191	G	T	SNP	CDC42BPB	NM_006035.3	human	genbank	58_37c	-1	reviewed	silent	c.3360	p.V1120	0.890	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_PBD,HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CEACAM6	4680	genome.wustl.edu	37	19	42260867	42260867	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	42260867	42260867	C	T	SNP	CEACAM6	NM_002483.4	human	genbank	58_37c	+1	validated	missense	c.424	p.P142S	0.100	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
CTNND2	1501	genome.wustl.edu	37	5	10981909	10981909	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	5	10981909	10981909	G	-	DEL	CTNND2	NM_001332.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.3393	p.A1132fs	0.985	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
CTNND2	1501	genome.wustl.edu	37	5	11110989	11110991	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	5	11110989	11110991	TTC	-	DEL	CTNND2	NM_001332.2	human	genbank	58_37c	-1	validated	in_frame_del	c.2444_2442	p.K817in_frame_del	1.000:1.000:1.000	superfamily_ARM repeat	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
CYP2B6	1555	genome.wustl.edu	37	19	41518287	41518287	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	41518287	41518287	A	G	SNP	CYP2B6	NM_000767.4	human	genbank	58_37c	+1	reviewed	missense	c.1049	p.E350G	0.989	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DDB1	1642	genome.wustl.edu	37	11	61068352	61068352	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	61068352	61068352	C	T	SNP	DDB1	NM_001923.3	human	genbank	58_37c	-1	validated	missense	c.3268	p.D1090N	1.000	NULL	HMMPfam_CPSF_A	-	no_errors
DENND4C	55667	genome.wustl.edu	37	9	19372133	19372133	+	Missense_Mutation	SNP	G	G	C	rs147925167	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	9	19372133	19372133	G	C	SNP	DENND4C	NM_017925.4	human	genbank	58_37c	+1	provisional	missense	c.4984	p.E1662Q	1.000	NULL	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_PPR,HMMPfam_dDENN,HMMSmart_SM00801	-	no_errors
DGKI	9162	genome.wustl.edu	37	7	137263039	137263039	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	7	137263039	137263039	G	A	SNP	DGKI	NM_004717.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1675	p.R559*	1.000	HMMPfam_DAGK_acc,HMMSmart_DAGKa	HMMPfam_DAGK_acc,HMMSmart_DAGKa,HMMPfam_DAGK_cat,HMMSmart_DAGKc,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1	-	no_errors
DNAH1	25981	genome.wustl.edu	37	3	52386030	52386030	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	3	52386030	52386030	C	-	DEL	DNAH1	NM_015512.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.2782	p.Q928fs	1.000	NULL	HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOCK5	80005	genome.wustl.edu	37	8	25265535	25265535	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	8	25265535	25265535	G	C	SNP	DOCK5	NM_024940.6	human	genbank	58_37c	+1	validated	silent	c.5130	p.S1710	0.062	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
DOPEY1	23033	genome.wustl.edu	37	6	83845441	83845441	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	6	83845441	83845441	C	T	SNP	DOPEY1	NM_015018.2	human	genbank	58_37c	+1	validated	nonsense	c.2974	p.R992*	1.000	NULL	HMMPfam_Dopey_N	-	no_errors
DSPP	1834	genome.wustl.edu	37	4	88537243	88537243	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	4	88537243	88537243	C	A	SNP	DSPP	NM_014208.3	human	genbank	58_37c	+1	reviewed	missense	c.3429	p.D1143E	0.451	NULL	NULL	-	no_errors
ENSG00000222088	0	genome.wustl.edu	37	Y	10037864	10037864	+	RNA	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	Y	10037864	10037864	G	A	SNP	ENSG00000251705	ENST00000515896	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
FLG2	388698	genome.wustl.edu	37	1	152323181	152323181	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	152323181	152323181	A	G	SNP	FLG2	NM_001014342.2	human	genbank	58_37c	-1	provisional	missense	c.7081	p.Y2361H	0.876	NULL	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_efhand,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
GDPD4	220032	genome.wustl.edu	37	11	76990360	76990360	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	76990360	76990360	T	A	SNP	GDPD4	NM_182833.1	human	genbank	58_37c	-1	provisional	silent	c.138	p.S46	0.417	NULL	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors
GPR32	2854	genome.wustl.edu	37	19	51274647	51274647	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	51274647	51274647	G	A	SNP	GPR32	NM_001506.1	human	genbank	58_37c	+1	provisional	missense	c.790	p.A264T	0.416	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
HAUS6	54801	genome.wustl.edu	37	9	19096764	19096764	+	Missense_Mutation	SNP	G	G	C	rs145845392	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	9	19096764	19096764	G	C	SNP	HAUS6	NM_017645.3	human	genbank	58_37c	-1	provisional	missense	c.132	p.N44K	1.000	NULL	NULL	-	no_errors
HOXC12	3228	genome.wustl.edu	37	12	54348878	54348889	+	In_Frame_Del	DEL	GCCGTCGGCGGA	GCCGTCGGCGGA	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	GCCGTCGGCGGA	GCCGTCGGCGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	12	54348878	54348889	GCCGTCGGCGGA	-	DEL	HOXC12	NM_173860.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.165_176	p.SAEP57in_frame_del	1.000:1.000:1.000:0.991:0.999:1.000:1.000:1.000:1.000:0.924:1.000:1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
IFITM1	8519	genome.wustl.edu	37	11	314286	314286	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	314286	314286	G	-	DEL	IFITM1	NM_003641.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.116	p.W39fs	1.000	HMMPfam_CD225	HMMPfam_CD225	-	no_errors
INA	9118	genome.wustl.edu	37	10	105048271	105048276	+	In_Frame_Del	DEL	GAGGAG	GAGGAG	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	GAGGAG	GAGGAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	10	105048271	105048276	GAGGAG	-	DEL	INA	NM_032727.3	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1345_1350	p.EE452in_frame_del	1.000:1.000:1.000:1.000:0.994:0.877	NULL	HMMPfam_Filament_head,HMMPfam_Filament,PatternScan_IF	-	no_errors
KCNQ2	3785	genome.wustl.edu	37	20	62065225	62065225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	20	62065225	62065225	G	A	SNP	KCNQ2	NM_172107.2	human	genbank	58_37c	-1	reviewed	missense	c.1055	p.S352L	0.833	NULL	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_Voltage-gated potassium channels	-	no_errors
KRTAP4-11	0	genome.wustl.edu	37	17	39274087	39274087	+	Missense_Mutation	SNP	G	G	C	rs141357429	byCluster;by1000genomes	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	17	39274087	39274087	G	C	SNP	KRTAP4-11	NM_033059.3	human	genbank	58_37c	-1	reviewed	missense	c.481	p.L161V	0.005	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LASS2	29956	genome.wustl.edu	37	1	150939291	150939291	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	150939291	150939291	G	A	SNP	LASS2	NM_022075.3	human	genbank	58_37c	-1	reviewed	silent	c.789	p.N263	1.000	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724,superfamily_Homeodomain-like	-	no_errors
LEKR1	389170	genome.wustl.edu	37	3	156742606	156742606	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	3	156742606	156742606	G	A	SNP	LEKR1	NM_001004316.2	human	genbank	58_37c	+1	validated	missense	c.349	p.A117T	1.000	NULL	NULL	-	no_errors
LOC400986	400986	genome.wustl.edu	37	2	96619685	96619686	+	Splice_Site	DEL	AC	AC	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	2	96619685	96619686	AC	-	DEL	LOC400986	XM_001717763.2	human	genbank	58_37c	-1	model	splice_site_del	c.258+1_258+1	e6+1	0.229:0.220	-	-	-	no_errors
LRRC2	79442	genome.wustl.edu	37	3	46586694	46586709	+	Frame_Shift_Del	DEL	GGATGCCCTTCCTCCT	GGATGCCCTTCCTCCT	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	GGATGCCCTTCCTCCT	GGATGCCCTTCCTCCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	3	46586694	46586709	GGATGCCCTTCCTCCT	-	DEL	LRRC2	NM_024512.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.175_160	p.R54fs	0.832:0.817:0.883:0.902:0.986:0.998:0.996:0.683:0.713:0.747:0.758:0.768:0.775:0.766:0.850:0.843	superfamily_SSF52058	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
MFSD4	148808	genome.wustl.edu	37	1	205549057	205549057	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	205549057	205549057	G	A	SNP	MFSD4	NM_181644.4	human	genbank	58_37c	+1	validated	missense	c.409	p.D137N	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
NOTCH3	4854	genome.wustl.edu	37	19	15272363	15272363	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	15272363	15272363	G	A	SNP	NOTCH3	NM_000435.2	human	genbank	58_37c	-1	reviewed	nonsense	c.6076	p.Q2026*	1.000	superfamily_Ankyrin repeat	PatternScan_ASX_HYDROXYL,HMMPfam_Notch,HMMSmart_SM00004,superfamily_Notch domain,HMMSmart_SM00179,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_NOD,HMMPfam_NODP,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
NR1I2	8856	genome.wustl.edu	37	3	119531721	119531721	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	3	119531721	119531721	C	T	SNP	NR1I2	NM_022002.2	human	genbank	58_37c	+1	reviewed	silent	c.825	p.I275	0.394	superfamily_Str_ncl_receptor	HMMPfam_Hormone_recep,HMMSmart_HOLI,HMMPfam_zf-C4,HMMSmart_ZnF_C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,superfamily_SSF57716	-	no_errors
ODZ1	10178	genome.wustl.edu	37	X	123779072	123779072	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	X	123779072	123779072	T	A	SNP	ODZ1	NM_014253.3	human	genbank	58_37c	-1	reviewed	silent	c.1797	p.P599	1.000	HMMSmart_EGF,HMMPfam_EGF_2	HMMPfam_NHL,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_RHS_repeat,HMMPfam_Ten_N,superfamily_N2O_reductase_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_SSF57196	-	no_errors
OLFML2B	25903	genome.wustl.edu	37	1	161953618	161953618	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	161953618	161953618	G	A	SNP	OLFML2B	NM_015441.1	human	genbank	58_37c	-1	provisional	silent	c.2100	p.F700	0.992	HMMPfam_OLF,HMMSmart_SM00284	HMMPfam_OLF,HMMSmart_SM00284	-	no_errors
OR4A15	81328	genome.wustl.edu	37	11	55135638	55135638	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	55135638	55135638	T	C	SNP	OR4A15	NM_001005275.1	human	genbank	58_37c	+1	provisional	silent	c.279	p.S93	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR7D4	125958	genome.wustl.edu	37	19	9324863	9324863	+	Silent	SNP	G	G	T	rs8109935	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	9324863	9324863	G	T	SNP	OR7D4	NM_001005191.1	human	genbank	58_37c	-1	provisional	silent	c.651	p.S217	0.934	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PION	54103	genome.wustl.edu	37	7	77006204	77006204	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	7	77006204	77006204	T	C	SNP	PION	NM_017439.3	human	genbank	58_37c	-1	validated	silent	c.702	p.K234	1.000	NULL	NULL	-	no_errors
PMS1	5378	genome.wustl.edu	37	2	190682855	190682855	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	2	190682855	190682855	G	C	SNP	PMS1	NM_000534.4	human	genbank	58_37c	+1	reviewed	missense	c.531	p.M177I	0.988	superfamily_ATP_bd_ATPase	HMMPfam_HMG_box,HMMSmart_HMG,HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase,superfamily_HMG-box,HMMPfam_DNA_mis_repair,PatternScan_DNA_MISMATCH_REPAIR_1,superfamily_Ribosomal_S5_D2-typ_fold	-	no_errors
PPP2R4	5524	genome.wustl.edu	37	9	131897091	131897091	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	9	131897091	131897091	G	T	SNP	PPP2R4	NM_178001.1	human	genbank	58_37c	+1	reviewed	missense	c.583	p.A195S	1.000	HMMPfam_PTPA	HMMPfam_PTPA	-	no_errors
PVRL2	5819	genome.wustl.edu	37	19	45381598	45381600	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	45381598	45381600	GAG	-	DEL	PVRL2	NM_002856.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1161_1163	p.R391in_frame_del	0.999:1.000:1.000	NULL	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
SFRP1	6422	genome.wustl.edu	37	8	41166389	41166389	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	8	41166389	41166389	C	T	SNP	SFRP1	NM_003012.4	human	genbank	58_37c	-1	reviewed	nonsense	c.290	p.W97*	1.000	superfamily_Frizzled_Cys-rich,HMMPfam_Fz,HMMSmart_FRI	superfamily_Frizzled_Cys-rich,superfamily_TIMP_like,HMMPfam_NTR,HMMSmart_C345C,HMMPfam_Fz,HMMSmart_FRI	-	no_errors
SIPA1L3	23094	genome.wustl.edu	37	19	38682834	38682834	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	38682834	38682834	G	T	SNP	SIPA1L3	NM_015073.1	human	genbank	58_37c	+1	validated	missense	c.4480	p.A1494S	1.000	NULL	HMMPfam_Rap_GAP,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,superfamily_SSF111347	-	no_errors
SLC19A2	10560	genome.wustl.edu	37	1	169446469	169446469	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	169446469	169446469	G	T	SNP	SLC19A2	NM_006996.2	human	genbank	58_37c	-1	reviewed	missense	c.731	p.S244Y	0.004	HMMPfam_Folate_carrier,superfamily_MFS general substrate transporter	PatternScan_G_PROTEIN_RECEP_F1_1,HMMPfam_Folate_carrier,superfamily_MFS general substrate transporter	-	no_errors
SMC1A	8243	genome.wustl.edu	37	X	53423505	53423505	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	X	53423505	53423505	C	A	SNP	SMC1A	NM_006306.2	human	genbank	58_37c	-1	reviewed	missense	c.2595	p.E865D	1.000	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540	-	no_errors
ST6GALNAC1	55808	genome.wustl.edu	37	17	74623252	74623252	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	17	74623252	74623252	C	T	SNP	ST6GALNAC1	NM_018414.3	human	genbank	58_37c	-1	validated	missense	c.1069	p.A357T	0.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
TJP1	7082	genome.wustl.edu	37	15	30018573	30018601	+	Splice_Site	DEL	AATGTCTTACCTTTCCCTCGGAAACCCAT	AATGTCTTACCTTTCCCTCGGAAACCCAT	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	AATGTCTTACCTTTCCCTCGGAAACCCAT	AATGTCTTACCTTTCCCTCGGAAACCCAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	15	30018573	30018601	AATGTCTTACCTTTCCCTCGGAAACCCAT	-	DEL	TJP1	NM_003257.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.2422_2394	p.W799fs	0.013:0.000:0.000:0.000:0.070:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.985:1.000:1.000:1.000:1.000:1.000:0.514:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.001	HMMPfam_Gua_kin_assoc_C,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ZU5,HMMSmart_SM00218,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,HMMPfam_Gua_kin_assoc_C,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TMC4	147798	genome.wustl.edu	37	19	54675769	54675769	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	19	54675769	54675769	C	T	SNP	TMC4	NM_001145303.1	human	genbank	58_37c	-1	validated	missense	c.181	p.A61T	0.013	NULL	HMMPfam_TMC	-	no_errors
TNIP2	79155	genome.wustl.edu	37	4	2746573	2746574	+	Frame_Shift_Ins	INS	-	-	GT	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	4	2746573	2746574	-	GT	INS	TNIP2	NM_024309.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.757_756	p.E252fs	0.962:0.000	NULL	NULL	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578212	7578212	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	17	7578212	7578212	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.637	p.R213*	0.893	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM9	114088	genome.wustl.edu	37	14	51444032	51444032	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	14	51444032	51444032	A	T	SNP	TRIM9	NM_015163.5	human	genbank	58_37c	-1	reviewed	missense	c.2110	p.S704T	1.000	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00502,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
TRPC6	7225	genome.wustl.edu	37	11	101344347	101344347	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	11	101344347	101344347	G	T	SNP	TRPC6	NM_004621.5	human	genbank	58_37c	-1	reviewed	silent	c.1902	p.I634	1.000	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2	-	no_errors
TRPC7	57113	genome.wustl.edu	37	5	135561796	135561796	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	5	135561796	135561796	T	G	SNP	TRPC7	ENST00000513104	human	ensembl	58_37c	-1	known	missense	c.2188	p.I730L	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Ion_trans,HMMPfam_TRP_2	-	no_errors
UCK2	7371	genome.wustl.edu	37	1	165872483	165872483	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	1	165872483	165872483	C	T	SNP	UCK2	NM_012474.3	human	genbank	58_37c	+1	reviewed	silent	c.564	p.F188	1.000	HMMPfam_PRK,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_PRK,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
VPRBP	9730	genome.wustl.edu	37	3	51458151	51458151	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	3	51458151	51458151	G	T	SNP	VPRBP	NM_014703.2	human	genbank	58_37c	-1	validated	missense	c.2114	p.A705D	1.000	superfamily_ARM repeat	HMMSmart_SM00667,superfamily_WD40 repeat-like,HMMPfam_LisH,superfamily_ARM repeat	-	no_errors
XKR9	389668	genome.wustl.edu	37	8	71593433	71593433	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	8	71593433	71593433	T	G	SNP	XKR9	NM_001011720.1	human	genbank	58_37c	+1	provisional	missense	c.140	p.F47C	1.000	HMMPfam_XK-related	HMMPfam_XK-related	-	no_errors
ZC3H15	55854	genome.wustl.edu	37	2	187351168	187351170	+	In_Frame_Del	DEL	AGG	AGG	-	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	AGG	AGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	2	187351168	187351170	AGG	-	DEL	ZC3H15	NM_018471.2	human	genbank	58_37c	+1	validated	in_frame_del	c.59_61	p.E21in_frame_del	1.000:1.000:1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1	-	no_errors
ZNF462	58499	genome.wustl.edu	37	9	109685755	109685755	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0IQ-01A-11W-A050-09	TCGA-B6-A0IQ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	583964cf-84ad-4ef1-90d1-2f6bfbeb245a	3f199ef5-ce92-487f-bf42-e16e986dc62c	9	109685755	109685755	C	G	SNP	ZNF462	NM_021224.4	human	genbank	58_37c	+1	validated	missense	c.91	p.L31V	1.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
