Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA13	154664	genome.wustl.edu	37	7	48285575	48285575	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	48285575	48285575	A	G	SNP	ABCA13	NM_152701.3	human	genbank	58_37c	+1	reviewed	missense	c.1607	p.N536S	0.000	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCF2	10061	genome.wustl.edu	37	7	150913108	150913108	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	150913108	150913108	G	T	SNP	ABCF2	NM_005692.3	human	genbank	58_37c	-1	reviewed	missense	c.1346	p.P449H	1.000	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540	HMMPfam_ABC_tran,HMMSmart_AAA,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ACCS	84680	genome.wustl.edu	37	11	44104793	44104793	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	11	44104793	44104793	C	T	SNP	ACCS	NM_001127219.1	human	genbank	58_37c	+1	validated	missense	c.1186	p.L396F	1.000	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	PatternScan_AA_TRANSFER_CLASS_1,HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	-	no_errors
ADAM15	8751	genome.wustl.edu	37	1	155029738	155029740	+	In_Frame_Del	DEL	GCT	GCT	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	GCT	GCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	155029738	155029740	GCT	-	DEL	ADAM15	NM_207197.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1223_1225	p.C409in_frame_del	1.000:1.000:1.000	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_CR,HMMSmart_SM00608,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
ADAMTS17	170691	genome.wustl.edu	37	15	100801809	100801809	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	15	100801809	100801809	C	A	SNP	ADAMTS17	NM_139057.2	human	genbank	58_37c	-1	reviewed	silent	c.906	p.R302	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,HMMSmart_SM00608,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	148037858	148037858	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	X	148037858	148037858	T	C	SNP	AFF2	NM_002025.3	human	genbank	58_37c	+1	reviewed	silent	c.2283	p.S761	0.961	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
ALAS1	211	genome.wustl.edu	37	3	52239960	52239960	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	52239960	52239960	G	C	SNP	ALAS1	NM_000688.4	human	genbank	58_37c	+1	validated	silent	c.906	p.G302	0.867	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	PatternScan_AA_TRANSFER_CLASS_2,HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	-	no_errors
ALDH1L1	10840	genome.wustl.edu	37	3	125877412	125877412	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	125877412	125877412	C	G	SNP	ALDH1L1	NM_012190.2	human	genbank	58_37c	-1	reviewed	missense	c.198	p.L66F	0.998	HMMPfam_Formyl_trans_N,superfamily_formyl_transf	PatternScan_GART,HMMPfam_Formyl_trans_N,superfamily_formyl_transf,HMMPfam_Formyl_trans_C,PatternScan_PHOSPHOPANTETHEINE,superfamily_ACP_like,superfamily_FMT_C_like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_Aldehyde_DH/Histidinol_DH	-	no_errors
APOB	338	genome.wustl.edu	37	2	21241873	21241873	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	2	21241873	21241873	G	A	SNP	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	nonsense	c.3112	p.Q1038*	0.983	HMMPfam_DUF1081	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
ARID4A	5926	genome.wustl.edu	37	14	58831916	58831916	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	58831916	58831916	C	G	SNP	ARID4A	NM_002892.3	human	genbank	58_37c	+1	reviewed	missense	c.3109	p.Q1037E	0.997	NULL	HMMSmart_SM00298,HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like,HMMSmart_SM00333,HMMPfam_RBB1NT	-	no_errors
ASB15	142685	genome.wustl.edu	37	7	123256326	123256326	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	123256326	123256326	A	G	SNP	ASB15	NM_080928.3	human	genbank	58_37c	+1	validated	silent	c.159	p.Q53	1.000	superfamily_Ankyrin repeat	HMMPfam_SOCS_box,HMMSmart_SM00253,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
BAI1	575	genome.wustl.edu	37	8	143569787	143569787	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	143569787	143569787	T	G	SNP	BAI1	NM_001702.2	human	genbank	58_37c	+1	reviewed	missense	c.2371	p.W791G	1.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors
BAZ1A	11177	genome.wustl.edu	37	14	35245596	35245596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	35245596	35245596	C	T	SNP	BAZ1A	NM_013448.2	human	genbank	58_37c	-1	validated	missense	c.2362	p.E788K	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_DDT,superfamily_FYVE/PHD zinc finger,HMMPfam_WAC_Acf1_DNA_bd,PatternScan_BROMODOMAIN_1,HMMSmart_SM00571,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
BCKDK	10295	genome.wustl.edu	37	16	31122020	31122022	+	In_Frame_Del	DEL	CGG	CGG	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	CGG	CGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	16	31122020	31122022	CGG	-	DEL	BCKDK	NM_005881.2	human	genbank	58_37c	+1	validated	in_frame_del	c.654_656	p.G219in_frame_del	0.970:1.000:1.000	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_BCDHK_Adom3	HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_BCDHK_Adom3,superfamily_alpha-ketoacid dehydrogenase kinase N-terminal domain	-	no_errors
C19orf43	79002	genome.wustl.edu	37	19	12841864	12841864	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	12841864	12841864	C	T	SNP	C19orf43	NM_024038.2	human	genbank	58_37c	-1	predicted	missense	c.442	p.D148N	1.000	NULL	NULL	-	no_errors
C1orf103	55791	genome.wustl.edu	37	1	111492643	111492643	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	111492643	111492643	C	G	SNP	C1orf103	NM_018372.3	human	genbank	58_37c	-1	validated	missense	c.1699	p.D567H	0.922	NULL	NULL	-	no_errors
C1orf26	54823	genome.wustl.edu	37	1	185135759	185135759	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	185135759	185135759	C	A	SNP	C1orf26	NM_001105518.1	human	genbank	58_37c	+1	validated	nonsense	c.140	p.S47*	0.007	NULL	HMMSmart_PINc,superfamily_SSF88723	-	no_errors
C1orf26	54823	genome.wustl.edu	37	1	185153935	185153935	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	185153935	185153935	A	T	SNP	C1orf26	NM_001105518.1	human	genbank	58_37c	+1	validated	missense	c.1301	p.K434M	0.999	HMMSmart_PINc,superfamily_SSF88723	HMMSmart_PINc,superfamily_SSF88723	-	no_errors
C21orf29	54084	genome.wustl.edu	37	21	45948407	45948407	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	21	45948407	45948407	G	T	SNP	C21orf29	NM_144991.2	human	genbank	58_37c	-1	provisional	missense	c.850	p.Q284K	1.000	NULL	HMMSmart_SM00210,HMMPfam_EPTP,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
CBL	867	genome.wustl.edu	37	11	119142562	119142562	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	11	119142562	119142562	G	A	SNP	CBL	NM_005188.2	human	genbank	58_37c	+1	reviewed	silent	c.561	p.A187	0.516	HMMPfam_Cbl_N2,superfamily_SSF47473	HMMPfam_UBA,HMMSmart_RING,HMMPfam_Cbl_N,superfamily_Adaptor_Cbl_N,HMMPfam_Cbl_N2,HMMPfam_Cbl_N3,HMMSmart_UBA,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF47473,superfamily_SSF55550,superfamily_SSF57850	-	no_errors
CCHCR1	54535	genome.wustl.edu	37	6	31117874	31117874	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	31117874	31117874	T	C	SNP	CCHCR1	NM_001105564.1	human	genbank	58_37c	-1	validated	missense	c.1331	p.H444R	0.590	HMMPfam_HCR	HMMPfam_HCR	-	no_errors
CDH19	28513	genome.wustl.edu	37	18	64197168	64197168	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	18	64197168	64197168	C	G	SNP	CDH19	NM_021153.2	human	genbank	58_37c	-1	reviewed	missense	c.1372	p.V458L	0.989	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CENPF	1063	genome.wustl.edu	37	1	214819500	214819500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	214819500	214819500	G	A	SNP	CENPF	NM_016343.3	human	genbank	58_37c	+1	reviewed	missense	c.6587	p.R2196K	0.000	HMMPfam_Cenp-F_leu_zip	superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F,HMMPfam_Cenp-F_N,HMMPfam_Cenp-F_leu_zip,superfamily_Spectrin repeat	-	no_errors
CRYBG3	131544	genome.wustl.edu	37	3	97598935	97598935	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	97598935	97598935	T	C	SNP	CRYBG3	NM_153605.2	human	genbank	58_37c	+1	validated	missense	c.1151	p.V384A	1.000	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Crystall,HMMSmart_SM00247,superfamily_Ricin B-like lectins,superfamily_gamma-Crystallin-like	-	no_errors
CYP26A1	1592	genome.wustl.edu	37	10	94834968	94834968	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	10	94834968	94834968	C	T	SNP	CYP26A1	NM_000783.3	human	genbank	58_37c	+1	reviewed	silent	c.768	p.C256	0.001	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP4A11	1579	genome.wustl.edu	37	1	47407052	47407052	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	47407052	47407052	G	T	SNP	CYP4A11	NM_000778.3	human	genbank	58_37c	-1	reviewed	silent	c.54	p.I18	0.981	NULL	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DPEP3	64180	genome.wustl.edu	37	16	68010014	68010014	+	Silent	SNP	G	G	C	rs150691835	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	16	68010014	68010014	G	C	SNP	DPEP3	NM_022357.3	human	genbank	58_37c	-1	reviewed	silent	c.1287	p.V429	1.000	HMMPfam_Peptidase_M19,superfamily_Metallo-dependent hydrolases	PatternScan_RENAL_DIPEPTIDASE_1,HMMPfam_Peptidase_M19,superfamily_Metallo-dependent hydrolases	-	no_errors
EHD2	30846	genome.wustl.edu	37	19	48229232	48229232	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	48229232	48229232	C	G	SNP	EHD2	NM_014601.3	human	genbank	58_37c	+1	reviewed	missense	c.666	p.D222E	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00027,HMMPfam_Dynamin_N,PatternScan_EF_HAND_1,superfamily_EF-hand,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
EIF4G2	1982	genome.wustl.edu	37	11	10827548	10827548	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	11	10827548	10827548	G	A	SNP	EIF4G2	ENST00000429377	human	ensembl	58_37c	-1	known	missense	c.373	p.P125S	1.000	NULL	HMMPfam_W2,HMMSmart_eIF5C,HMMPfam_MIF4G,HMMSmart_MIF4G,HMMPfam_MA3,HMMSmart_MA3,superfamily_ARM-type_fold	-	no_errors
ENTPD6	955	genome.wustl.edu	37	20	25198181	25198181	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	20	25198181	25198181	G	A	SNP	ENTPD6	NM_001247.2	human	genbank	58_37c	+1	reviewed	missense	c.842	p.R281Q	0.925	HMMPfam_GDA1_CD39	HMMPfam_GDA1_CD39,PatternScan_GDA1_CD39_NTPASE	-	no_errors
EPS8L1	54869	genome.wustl.edu	37	19	55598981	55598981	+	Nonstop_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	55598981	55598981	G	C	SNP	EPS8L1	NM_133180.2	human	genbank	58_37c	+1	reviewed	nonstop	c.2171	p.*724S	1.000	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00462,HMMPfam_PTB	-	no_errors
ERCC5	2073	genome.wustl.edu	37	13	103506681	103506681	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	13	103506681	103506681	G	C	SNP	ERCC5	NM_000123.2	human	genbank	58_37c	+1	reviewed	missense	c.424	p.D142H	1.000	superfamily_PIN domain-like	HMMPfam_XPG_N,HMMSmart_SM00485,HMMPfam_XPG_I,HMMSmart_SM00484,PatternScan_XPG_2,HMMSmart_SM00279,PatternScan_XPG_1,superfamily_5' to 3' exonuclease C-terminal subdomain,superfamily_PIN domain-like	-	no_errors
EXTL3	2137	genome.wustl.edu	37	8	28574385	28574386	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	28574385	28574386	-	C	INS	EXTL3	NM_001440.2	human	genbank	58_37c	+1	provisional	frame_shift_ins	c.809_810	p.H271fs	1.000:0.986	HMMPfam_Exostosin	HMMPfam_Exostosin,HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
FANCD2	2177	genome.wustl.edu	37	3	10107101	10107101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	10107101	10107101	C	T	SNP	FANCD2	NM_033084.3	human	genbank	58_37c	+1	reviewed	missense	c.2192	p.A731V	1.000	NULL	NULL	-	no_errors
FCAR	2204	genome.wustl.edu	37	19	55399642	55399642	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	55399642	55399642	C	G	SNP	FCAR	NM_002000.2	human	genbank	58_37c	+1	reviewed	silent	c.630	p.A210	0.543	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FZD3	7976	genome.wustl.edu	37	8	28413307	28413307	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	28413307	28413307	C	A	SNP	FZD3	NM_017412.2	human	genbank	58_37c	+1	reviewed	missense	c.1606	p.L536I	1.000	NULL	superfamily_Frizzled cysteine-rich domain,HMMPfam_Frizzled,HMMPfam_Fz,HMMSmart_SM00063	-	no_errors
GABRR3	200959	genome.wustl.edu	37	3	97731370	97731370	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	97731370	97731370	G	C	SNP	GABRR3	NM_001105580.1	human	genbank	58_37c	-1	provisional	missense	c.348	p.D116E	1.000	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	pseudogene
GLA	2717	genome.wustl.edu	37	X	100658891	100658891	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	X	100658891	100658891	C	G	SNP	GLA	NM_000169.2	human	genbank	58_37c	-1	reviewed	missense	c.277	p.D93H	1.000	HMMPfam_Melibiase,PatternScan_ALPHA_GALACTOSIDASE,superfamily_(Trans)glycosidases	HMMPfam_Melibiase,PatternScan_ALPHA_GALACTOSIDASE,superfamily_(Trans)glycosidases,superfamily_Glycosyl hydrolase domain	-	no_errors
GNPNAT1	64841	genome.wustl.edu	37	14	53251239	53251239	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	53251239	53251239	G	C	SNP	GNPNAT1	NM_198066.3	human	genbank	58_37c	-1	validated	missense	c.130	p.L44V	1.000	superfamily_Acyl-CoA N-acyltransferases (Nat)	HMMPfam_Acetyltransf_1,superfamily_Acyl-CoA N-acyltransferases (Nat)	-	no_errors
HECW1	23072	genome.wustl.edu	37	7	43548589	43548589	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	43548589	43548589	G	A	SNP	HECW1	NM_015052.3	human	genbank	58_37c	+1	validated	silent	c.3888	p.S1296	0.585	HMMSmart_HECTc,superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-	no_errors
HEMGN	55363	genome.wustl.edu	37	9	100689708	100689708	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	9	100689708	100689708	C	G	SNP	HEMGN	NM_018437.3	human	genbank	58_37c	-1	validated	missense	c.1413	p.E471D	0.039	NULL	NULL	-	no_errors
HIST2H2AC	8338	genome.wustl.edu	37	1	149858596	149858596	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	149858596	149858596	C	A	SNP	HIST2H2AC	NM_003517.2	human	genbank	58_37c	+1	reviewed	silent	c.72	p.L24	0.863	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HPDL	84842	genome.wustl.edu	37	1	45793708	45793708	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	45793708	45793708	G	C	SNP	HPDL	NM_032756.2	human	genbank	58_37c	+1	validated	missense	c.888	p.Q296H	0.956	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	-	no_errors
HSPG2	3339	genome.wustl.edu	37	1	22179535	22179535	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	22179535	22179535	G	T	SNP	HSPG2	ENST00000374695	human	ensembl	58_37c	-1	known	silent	c.6468	p.I2156	1.000	HMMSmart_SM00406,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Immunoglobulin	HMMPfam_Laminin_B,HMMPfam_SEA,HMMSmart_SM00200,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,HMMSmart_SM00281,superfamily_Immunoglobulin,superfamily_EGF/Laminin	-	no_errors
IFT122	55764	genome.wustl.edu	37	3	129225321	129225321	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	129225321	129225321	C	G	SNP	IFT122	NM_052985.2	human	genbank	58_37c	+1	reviewed	missense	c.2873	p.A958G	0.956	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
IP6K3	117283	genome.wustl.edu	37	6	33693353	33693353	+	Missense_Mutation	SNP	A	A	T	rs139534699	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	33693353	33693353	A	T	SNP	IP6K3	NM_001142883.1	human	genbank	58_37c	-1	reviewed	missense	c.630	p.H210Q	0.000	HMMPfam_IPK,superfamily_SAICAR synthase-like	HMMPfam_IPK,superfamily_SAICAR synthase-like	-	no_errors
KCNA5	3741	genome.wustl.edu	37	12	5154568	5154568	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	5154568	5154568	G	T	SNP	KCNA5	NM_002234.2	human	genbank	58_37c	+1	reviewed	missense	c.1255	p.G419W	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KIAA1529	57653	genome.wustl.edu	37	9	100075583	100075583	+	Missense_Mutation	SNP	A	A	C	rs17855671	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	9	100075583	100075583	A	C	SNP	KIAA1529	NM_020893.1	human	genbank	58_37c	+1	predicted	missense	c.964	p.S322R	0.000	NULL	NULL	-	no_errors
KRT222	125113	genome.wustl.edu	37	17	38816255	38816255	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	17	38816255	38816255	C	G	SNP	KRT222	NM_152349.2	human	genbank	58_37c	-1	validated	missense	c.430	p.E144Q	1.000	HMMPfam_Filament,PatternScan_IF	HMMPfam_Filament,PatternScan_IF	-	no_errors
LAMA4	3910	genome.wustl.edu	37	6	112437070	112437070	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	112437070	112437070	C	A	SNP	LAMA4	NM_001105206.1	human	genbank	58_37c	-1	reviewed	missense	c.5108	p.G1703V	1.000	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
LAMP2	3920	genome.wustl.edu	37	X	119565295	119565295	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	X	119565295	119565295	G	A	SNP	LAMP2	NM_002294.2	human	genbank	58_37c	-1	reviewed	silent	c.1116	p.D372	0.631	HMMPfam_Lamp,PatternScan_LAMP_2	HMMPfam_Lamp,PatternScan_LAMP_1,PatternScan_LAMP_2	-	no_errors
LAPTM4B	55353	genome.wustl.edu	37	8	98817648	98817648	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	98817648	98817648	C	G	SNP	LAPTM4B	NM_018407.4	human	genbank	58_37c	+1	validated	nonsense	c.440	p.S147*	0.996	HMMPfam_Mtp	HMMPfam_Mtp	-	no_errors
LARS	51520	genome.wustl.edu	37	5	145539015	145539015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	5	145539015	145539015	C	T	SNP	LARS	NM_020117.9	human	genbank	58_37c	-1	reviewed	silent	c.726	p.P242	0.975	superfamily_Nucleotidylyl transferase	PatternScan_AA_TRNA_LIGASE_I,superfamily_ValRS/IleRS/LeuRS editing domain,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1,HMMPfam_tRNA-synt_1g,superfamily_Nucleotidylyl transferase	-	no_errors
LCP1	3936	genome.wustl.edu	37	13	46701779	46701779	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	13	46701779	46701779	T	A	SNP	LCP1	NM_002298.4	human	genbank	58_37c	-1	reviewed	missense	c.1831	p.M611L	1.000	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,HMMSmart_EFh,superfamily_Calponin-homology,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
LOC100288117	0	genome.wustl.edu	37	21	20230273	20230273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	21	20230273	20230273	G	A	SNP	LOC100288117	XM_002343738.1	human	genbank	58_37c	-1	model	missense	c.34	p.P12S	0.988	NULL	NULL	-	no_errors
LOC100290187	0	genome.wustl.edu	37	X	1557729	1557729	+	Silent	SNP	G	A	A	rs142945975	by1000genomes	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	X	1557729	1557729	G	A	SNP	LOC100290187	XM_002348240.1	human	genbank	58_37c	-1	model	silent	c.168	p.P56	0.020	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
LOC388996	388996	genome.wustl.edu	37	2	91777889	91777889	+	RNA	SNP	G	G	T	rs13410511	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	2	91777889	91777889	G	T	SNP	LOC388996	XR_017571.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.959	-	-	-	pseudogene
LOC644950	0	genome.wustl.edu	37	3	109128754	109128754	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	109128754	109128754	A	T	SNP	LOC644950	XM_001717224.2	human	genbank	58_37c	-1	model	missense	c.197	p.L66H	1.000	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
LRP1	4035	genome.wustl.edu	37	12	57592310	57592310	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	57592310	57592310	C	T	SNP	LRP1	NM_002332.2	human	genbank	58_37c	+1	reviewed	missense	c.9533	p.S3178F	0.996	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
LSM4	25804	genome.wustl.edu	37	19	18426844	18426844	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	18426844	18426844	T	-	DEL	LSM4	NM_012321.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.35	p.N12fs	1.000	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins	-	no_errors
MCM4	4173	genome.wustl.edu	37	8	48887464	48887464	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	48887464	48887464	G	A	SNP	MCM4	NM_005914.2	human	genbank	58_37c	+1	reviewed	silent	c.2307	p.L769	0.262	HMMPfam_MCM,HMMSmart_MCM,superfamily_SSF52540	HMMPfam_MCM,HMMSmart_MCM,HMMSmart_AAA,superfamily_Nucleic_acid_OB,PatternScan_MCM_1,superfamily_SSF52540	-	no_errors
MIR409	0	genome.wustl.edu	37	14	101531674	101531674	+	RNA	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	101531674	101531674	C	G	SNP	MIR409	ENST00000362237	human	ensembl	58_37c	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MMP17	4326	genome.wustl.edu	37	12	132325312	132325313	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	132325312	132325313	-	T	INS	MMP17	NM_016155.4	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.617_618	p.V207fs	0.994:0.372	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"	"superfamily_Hemopexin-like domain,HMMPfam_Peptidase_M10,HMMPfam_PG_binding_1,superfamily_PGBD-like,HMMSmart_SM00235,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
MUDENG	55745	genome.wustl.edu	37	14	57755684	57755684	+	RNA	SNP	T	T	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	57755684	57755684	T	A	SNP	MUDENG	NR_026895.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.000	-	-	-	no_errors
MYB	4602	genome.wustl.edu	37	6	135520054	135520054	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	135520054	135520054	C	G	SNP	MYB	NM_001130173.1	human	genbank	58_37c	+1	reviewed	missense	c.1575	p.N525K	1.000	HMMPfam_Cmyb_C	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Wos2,HMMPfam_Myb_DNA-binding,HMMPfam_Cmyb_C	-	no_errors
MYO5B	4645	genome.wustl.edu	37	18	47500828	47500828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	18	47500828	47500828	G	A	SNP	MYO5B	NM_001080467.2	human	genbank	58_37c	-1	reviewed	missense	c.1214	p.A405V	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_DIL,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NLRP5	126206	genome.wustl.edu	37	19	56565089	56565089	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	56565089	56565089	C	A	SNP	NLRP5	NM_153447.4	human	genbank	58_37c	+1	reviewed	missense	c.3214	p.L1072I	0.267	superfamily_SSF52047	HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH_like,superfamily_SSF52047,superfamily_SSF52540	-	no_errors
OR10V1	390201	genome.wustl.edu	37	11	59481034	59481034	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	11	59481034	59481034	G	C	SNP	OR10V1	NM_001005324.1	human	genbank	58_37c	-1	provisional	missense	c.285	p.I95M	0.003	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OVCH1	341350	genome.wustl.edu	37	12	29642562	29642562	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	29642562	29642562	G	A	SNP	OVCH1	NM_183378.2	human	genbank	58_37c	-1	validated	silent	c.693	p.D231	0.035	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_SER	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
PDE4C	5143	genome.wustl.edu	37	19	18322580	18322580	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	18322580	18322580	C	G	SNP	PDE4C	NM_000923.3	human	genbank	58_37c	-1	validated	missense	c.1780	p.E594Q	1.000	HMMPfam_PDEase_I,superfamily_HD-domain/PDEase-like	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like	-	no_errors
PGLYRP3	114771	genome.wustl.edu	37	1	153271673	153271673	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	153271673	153271673	C	T	SNP	PGLYRP3	NM_052891.1	human	genbank	58_37c	-1	provisional	missense	c.763	p.G255R	1.000	HMMPfam_Amidase_2,HMMSmart_Ami_2,superfamily_Amidase_2,HMMSmart_PGRP	HMMPfam_Amidase_2,HMMSmart_Ami_2,superfamily_Amidase_2,HMMSmart_PGRP	-	no_errors
PHKG2	5261	genome.wustl.edu	37	16	30762654	30762654	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	16	30762654	30762654	G	-	DEL	PHKG2	ENST00000424889	human	ensembl	58_37c	+1	known	frame_shift_del	c.323	p.W108fs	0.000	NULL	superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PIAS4	51588	genome.wustl.edu	37	19	4013263	4013263	+	Missense_Mutation	SNP	G	G	A	rs111928159	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	4013263	4013263	G	A	SNP	PIAS4	NM_015897.2	human	genbank	58_37c	+1	provisional	missense	c.370	p.A124T	0.475	NULL	HMMPfam_SAP,HMMSmart_SAP,HMMPfam_zf-MIZ,superfamily_SSF57850	-	no_errors
PLK2	10769	genome.wustl.edu	37	5	57750417	57750422	+	In_Frame_Del	DEL	CATCTT	CATCTT	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	CATCTT	CATCTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	5	57750417	57750422	CATCTT	-	DEL	PLK2	NM_006622.2	human	genbank	58_37c	-1	validated	in_frame_del	c.2051_2046	p.QRC682in_frame_delH	1.000:1.000:0.999:1.000:1.000:1.000	superfamily_SSF82615	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_POLO_box,superfamily_SSF82615	-	no_errors
PLK2	10769	genome.wustl.edu	37	5	57750425	57750425	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	5	57750425	57750425	T	A	SNP	PLK2	NM_006622.2	human	genbank	58_37c	-1	validated	missense	c.2043	p.L681F	1.000	superfamily_SSF82615	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_POLO_box,superfamily_SSF82615	-	no_errors
PRTG	283659	genome.wustl.edu	37	15	56032653	56032653	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	15	56032653	56032653	T	A	SNP	PRTG	NM_173814.4	human	genbank	58_37c	-1	validated	missense	c.324	p.E108D	1.000	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_IGc2,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
PSMD3	5709	genome.wustl.edu	37	17	38140605	38140605	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	17	38140605	38140605	C	T	SNP	PSMD3	NM_002809.2	human	genbank	58_37c	+1	reviewed	silent	c.279	p.F93	0.835	superfamily_TPR-like	"HMMPfam_PCI,HMMSmart_SM00088,HMMSmart_SM00753,HMMPfam_Rpn3_C,superfamily_""Winged helix"" DNA-binding domain,superfamily_TPR-like"	-	no_errors
RAP2B	5912	genome.wustl.edu	37	3	152880727	152880727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	152880727	152880727	A	G	SNP	RAP2B	NM_002886.2	human	genbank	58_37c	+1	reviewed	missense	c.245	p.Y82C	1.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RBPJL	11317	genome.wustl.edu	37	20	43942673	43942673	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	20	43942673	43942673	A	T	SNP	RBPJL	NM_014276.2	human	genbank	58_37c	+1	reviewed	splice_site	c.758-2	e8-2	0.981	-	-	-	no_errors
RP1	6101	genome.wustl.edu	37	8	55537315	55537315	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	8	55537315	55537315	C	A	SNP	RP1	NM_006269.1	human	genbank	58_37c	+1	reviewed	missense	c.873	p.D291E	0.051	NULL	HMMPfam_DCX,HMMSmart_DCX,superfamily_SSF89837	-	no_errors
RPL4	6124	genome.wustl.edu	37	15	66794137	66794137	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	15	66794137	66794137	C	G	SNP	RPL4	NM_000968.2	human	genbank	58_37c	-1	reviewed	missense	c.535	p.D179H	1.000	HMMPfam_Ribosomal_L4,superfamily_Ribosomal protein L4	HMMPfam_Ribosomal_L4,superfamily_Ribosomal protein L4,PatternScan_RIBOSOMAL_L1E,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors
RSPH9	221421	genome.wustl.edu	37	6	43624412	43624412	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	43624412	43624412	G	A	SNP	RSPH9	NM_152732.3	human	genbank	58_37c	+1	provisional	missense	c.622	p.D208N	1.000	NULL	NULL	-	no_errors
SEC14L5	9717	genome.wustl.edu	37	16	5009367	5009367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	16	5009367	5009367	C	T	SNP	SEC14L5	NM_014692.1	human	genbank	58_37c	+1	validated	missense	c.43	p.P15S	0.999	NULL	HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C,HMMPfam_PRELI,HMMPfam_CRAL_TRIO_N,superfamily_Sec14p_like_N,superfamily_SSF101576	-	no_errors
SLC13A1	6561	genome.wustl.edu	37	7	122759197	122759197	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	122759197	122759197	A	T	SNP	SLC13A1	NM_022444.3	human	genbank	58_37c	-1	validated	missense	c.1450	p.L484I	0.999	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors
SLC2A10	81031	genome.wustl.edu	37	20	45354529	45354529	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	20	45354529	45354529	T	C	SNP	SLC2A10	NM_030777.3	human	genbank	58_37c	+1	reviewed	missense	c.854	p.L285P	0.031	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,superfamily_MFS general substrate transporter	-	no_errors
SLC2A3	6515	genome.wustl.edu	37	12	8077007	8077007	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	8077007	8077007	T	C	SNP	SLC2A3	NM_006931.2	human	genbank	58_37c	-1	validated	missense	c.1067	p.K356R	0.994	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,PatternScan_SUGAR_TRANSPORT_2,superfamily_MFS general substrate transporter	-	no_errors
SLCO2A1	6578	genome.wustl.edu	37	3	133661572	133661572	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	133661572	133661572	G	T	SNP	SLCO2A1	NM_005630.2	human	genbank	58_37c	-1	validated	nonsense	c.1502	p.S501*	0.295	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SLCO2A1	6578	genome.wustl.edu	37	3	133667494	133667494	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	133667494	133667494	C	G	SNP	SLCO2A1	NM_005630.2	human	genbank	58_37c	-1	validated	missense	c.991	p.V331L	1.000	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SP6	80320	genome.wustl.edu	37	17	45925604	45925604	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	17	45925604	45925604	C	G	SNP	SP6	NM_199262.2	human	genbank	58_37c	-1	validated	silent	c.192	p.S64	0.005	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
STEAP4	79689	genome.wustl.edu	37	7	87910332	87910332	+	Silent	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	87910332	87910332	C	G	SNP	STEAP4	NM_024636.2	human	genbank	58_37c	-1	validated	silent	c.1047	p.V349	0.002	HMMPfam_Ferric_reduct	HMMPfam_F420_oxidored,HMMPfam_Ferric_reduct,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_HEMOPEXIN	-	no_errors
STK10	6793	genome.wustl.edu	37	5	171520913	171520913	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	5	171520913	171520913	T	A	SNP	STK10	NM_005990.3	human	genbank	58_37c	-1	reviewed	missense	c.1057	p.N353Y	0.000	NULL	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
SULT1C3	442038	genome.wustl.edu	37	2	108881768	108881768	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	2	108881768	108881768	G	C	SNP	SULT1C3	NM_001008743.1	human	genbank	58_37c	+1	provisional	missense	c.876	p.K292N	0.999	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TAS2R43	259289	genome.wustl.edu	37	12	11244067	11244068	+	Frame_Shift_Ins	INS	-	-	TT	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	12	11244067	11244068	-	TT	INS	TAS2R43	NM_176884.2	human	genbank	58_37c	-1	provisional	frame_shift_ins	c.762_761	p.S254fs	0.000:0.000	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	-	no_errors
TGFB3	7043	genome.wustl.edu	37	14	76437505	76437505	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	14	76437505	76437505	C	T	SNP	TGFB3	NM_003239.2	human	genbank	58_37c	-1	reviewed	missense	c.610	p.V204I	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,superfamily_Cystine-knot cytokines	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577031	7577031	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	17	7577031	7577031	T	-	DEL	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.907	p.S303fs	1.000	NULL	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM67	440730	genome.wustl.edu	37	1	231344720	231344720	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	1	231344720	231344720	C	G	SNP	TRIM67	NM_001004342.3	human	genbank	58_37c	+1	validated	missense	c.1847	p.S616C	1.000	superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00502,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
TRPV6	55503	genome.wustl.edu	37	7	142573589	142573589	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	142573589	142573589	G	C	SNP	TRPV6	NM_018646.2	human	genbank	58_37c	-1	validated	silent	c.831	p.L277	0.901	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans	-	no_errors
UBA7	7318	genome.wustl.edu	37	3	49845531	49845531	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	49845531	49845531	G	T	SNP	UBA7	NM_003335.2	human	genbank	58_37c	-1	reviewed	missense	c.2445	p.N815K	1.000	HMMPfam_UBACT,superfamily_MoeB	HMMPfam_UBACT,HMMPfam_ThiF,superfamily_MoeB,PatternScan_UBIQUITIN_ACTIVAT_1,PatternScan_UBIQUITIN_ACTIVAT_2,HMMPfam_UBA_e1_C,HMMPfam_UBA_e1_thiolCys	-	no_errors
UTRN	7402	genome.wustl.edu	37	6	144837401	144837401	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	6	144837401	144837401	G	T	SNP	UTRN	NM_007124.2	human	genbank	58_37c	+1	reviewed	missense	c.5281	p.V1761F	0.097	NULL	HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,HMMPfam_Spectrin,HMMPfam_efhand_1,HMMPfam_efhand_2,superfamily_Calponin-homology,HMMSmart_SPEC,superfamily_Spectrin,superfamily_SSF47473	-	no_errors
VPS8	23355	genome.wustl.edu	37	3	184577834	184577834	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	3	184577834	184577834	A	G	SNP	VPS8	NM_001009921.2	human	genbank	58_37c	+1	validated	missense	c.1205	p.Y402C	1.000	NULL	HMMSmart_RING,superfamily_WD40_like,superfamily_ARM-type_fold,superfamily_SSF57850	-	no_errors
WNT8B	7479	genome.wustl.edu	37	10	102239712	102239712	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	10	102239712	102239712	C	T	SNP	WNT8B	NM_003393.3	human	genbank	58_37c	+1	reviewed	missense	c.184	p.R62C	1.000	HMMPfam_wnt,HMMSmart_WNT1	HMMPfam_wnt,HMMSmart_WNT1,PatternScan_WNT1	-	no_errors
ZC3HC1	51530	genome.wustl.edu	37	7	129663533	129663533	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	7	129663533	129663533	G	A	SNP	ZC3HC1	NM_016478.3	human	genbank	58_37c	-1	validated	nonsense	c.1051	p.R351*	0.951	NULL	HMMPfam_zf-C3HC	-	no_errors
ZFP37	7539	genome.wustl.edu	37	9	115818872	115818872	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	9	115818872	115818872	C	G	SNP	ZFP37	NM_003408.1	human	genbank	58_37c	-1	provisional	missense	c.97	p.E33Q	0.716	HMMSmart_KRAB	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF526	116115	genome.wustl.edu	37	19	42730170	42730170	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	42730170	42730170	C	G	SNP	ZNF526	NM_133444.1	human	genbank	58_37c	+1	provisional	missense	c.1615	p.Q539E	0.998	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF714	148206	genome.wustl.edu	37	19	21299680	21299680	+	Silent	SNP	G	G	C	novel	unknown	TCGA-B6-A0RE-01A-11W-A071-09	TCGA-B6-A0RE-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	db2bd5cf-f0a7-4874-89eb-15029447dae1	21d6d4ec-23c7-470d-8654-59d20f56c9a6	19	21299680	21299680	G	C	SNP	ZNF714	ENST00000291770	human	ensembl	58_37c	+1	known	silent	c.210	p.V70	0.006	NULL	HMMSmart_SM00349,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
