Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB8	0	genome.wustl.edu	37	7	150731381	150731381	+	Missense_Mutation	SNP	G	G	A	rs150872185	byFrequency	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	7	150731381	150731381	G	A	SNP	ABCB8	NM_007188.3	human	genbank	58_37c	+1	reviewed	missense	c.430	p.V144M	0.995	HMMPfam_ABC_membrane,superfamily_ABC_TM_1	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_ABC_TM_1,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ANKRD13A	0	genome.wustl.edu	37	12	110456273	110456273	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	12	110456273	110456273	G	T	SNP	ANKRD13A	NM_033121.1	human	genbank	58_37c	+1	validated	missense	c.524	p.S175I	1.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_UIM,HMMSmart_SM00726	-	no_errors
ATP9B	0	genome.wustl.edu	37	18	76870422	76870422	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	18	76870422	76870422	G	T	SNP	ATP9B	NM_198531.3	human	genbank	58_37c	+1	validated	nonsense	c.361	p.G121*	1.000	NULL	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
C1orf227	0	genome.wustl.edu	37	1	213009307	213009307	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	1	213009307	213009307	G	T	SNP	C1orf227	NM_001024601.2	human	genbank	58_37c	-1	predicted	missense	c.185	p.T62K	0.001	NULL	NULL	-	no_errors
CEP152	0	genome.wustl.edu	37	15	49031351	49031351	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	15	49031351	49031351	C	T	SNP	CEP152	NM_014985.2	human	genbank	58_37c	-1	provisional	missense	c.4060	p.A1354T	0.000	NULL	NULL	-	no_errors
CRP	0	genome.wustl.edu	37	1	159683855	159683855	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	1	159683855	159683855	C	A	SNP	CRP	NM_000567.2	human	genbank	58_37c	-1	reviewed	silent	c.135	p.T45	0.000	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Pentaxin,HMMSmart_SM00159,PatternScan_PENTAXIN,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
DOPEY2	0	genome.wustl.edu	37	21	37665770	37665770	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	21	37665770	37665770	A	T	SNP	DOPEY2	ENST00000414001	human	ensembl	58_37c	+1	known	missense	c.44	p.E15V	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
EIF4E1B	0	genome.wustl.edu	37	5	176070219	176070220	+	In_Frame_Ins	INS	-	-	CCG	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	5	176070219	176070220	-	CCG	INS	EIF4E1B	NM_001099408.1	human	genbank	58_37c	+1	validated	in_frame_ins	c.152_153	p.52in_frame_insR	0.000:0.000	HMMPfam_IF4E,superfamily_TIF_eIF_4E	HMMPfam_IF4E,superfamily_TIF_eIF_4E,PatternScan_IF4E	-	no_errors
ENSG00000172995	0	genome.wustl.edu	37	3	35770832	35770832	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	35770832	35770832	G	A	SNP	ENSG00000172995	ENST00000425289	human	ensembl	58_37c	+1	known	missense	c.580	p.A194T	0.001	NULL	HMMPfam_R3H,HMMSmart_SM00393,superfamily_R3H domain	-	no_start_codon:pseudogene:bad_bp_length_for_coding_region
ENSG00000198886	0	genome.wustl.edu	37	MT	10974	10974	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	MT	10974	10974	T	C	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.215	p.L72P	NULL	HMMPfam_Oxidored_q5_N	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000198888	0	genome.wustl.edu	37	MT	3859	3859	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	MT	3859	3859	T	C	SNP	ENSG00000198888	ENST00000361390	human	ensembl	58_37c	+1	known	missense	c.553	p.W185R	NULL	HMMPfam_NADHdh	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_1,PatternScan_COMPLEX1_ND1_2	-	no_stop_codon:mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2108	2108	+	RNA	SNP	G	G	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	MT	2108	2108	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1069	1069	+	RNA	SNP	A	A	G	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	MT	1069	1069	A	G	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000236623	0	genome.wustl.edu	37	10	42391395	42391395	+	RNA	SNP	A	A	T	rs145330770	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	10	42391395	42391395	A	T	SNP	ENSG00000236623	ENST00000423802	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
F8	0	genome.wustl.edu	37	X	154088864	154088864	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	X	154088864	154088864	C	A	SNP	F8	NM_000132.3	human	genbank	58_37c	-1	reviewed	missense	c.6743	p.W2248L	1.000	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,superfamily_Galactose-binding domain-like	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Cu-oxidase,PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins,superfamily_Galactose-binding domain-like,HMMPfam_Cu-oxidase_2,HMMPfam_Cu-oxidase_3	-	no_errors
FAM22G	0	genome.wustl.edu	37	9	99698810	99698810	+	Silent	SNP	C	C	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	9	99698810	99698810	C	A	SNP	FAM22G	NM_001045477.2	human	genbank	58_37c	+1	validated	silent	c.946	p.R316	0.009	NULL	NULL	-	no_errors
FAM70A	0	genome.wustl.edu	37	X	119418990	119418990	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	X	119418990	119418990	G	T	SNP	FAM70A	NM_017938.3	human	genbank	58_37c	-1	validated	missense	c.576	p.N192K	1.000	NULL	NULL	-	no_errors
FEZF2	0	genome.wustl.edu	37	3	62358251	62358251	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	62358251	62358251	C	T	SNP	FEZF2	NM_018008.3	human	genbank	58_37c	-1	validated	missense	c.293	p.S98N	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
FLI1	0	genome.wustl.edu	37	11	128680620	128680620	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	11	128680620	128680620	G	A	SNP	FLI1	NM_002017.3	human	genbank	58_37c	+1	validated	missense	c.1096	p.A366T	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_SAM/Pointed domain,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
FLJ10357	0	genome.wustl.edu	37	14	21543885	21543885	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	14	21543885	21543885	C	T	SNP	FLJ10357	NM_018071.3	human	genbank	58_37c	+1	validated	missense	c.1700	p.T567M	0.009	NULL	superfamily_DBL homology domain (DH-domain),HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
HRNR	0	genome.wustl.edu	37	1	152188526	152188526	+	Missense_Mutation	SNP	C	C	T	rs145041332	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	1	152188526	152188526	C	T	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	missense	c.5579	p.R1860Q	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
HS3ST2	0	genome.wustl.edu	37	16	22926374	22926374	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	16	22926374	22926374	A	G	SNP	HS3ST2	NM_006043.1	human	genbank	58_37c	+1	reviewed	missense	c.595	p.K199E	1.000	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	-	no_errors
KIAA2026	0	genome.wustl.edu	37	9	5921685	5921685	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	9	5921685	5921685	A	G	SNP	KIAA2026	NM_001017969.2	human	genbank	58_37c	-1	validated	silent	c.4311	p.T1437	0.979	NULL	superfamily_Bromodomain	-	no_errors
KRTAP4-7	0	genome.wustl.edu	37	17	39240627	39240627	+	Missense_Mutation	SNP	T	T	C	rs189343211	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	17	39240627	39240627	T	C	SNP	KRTAP4-7	ENST00000377731	human	ensembl	58_37c	+1	known	missense	c.169	p.S57P	0.032	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
LOC100129053	0	genome.wustl.edu	37	11	94782869	94782869	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	11	94782869	94782869	T	C	SNP	LOC100129053	XM_001717996.1	human	genbank	58_37c	+1	model	missense	c.284	p.V95A	0.116	NULL	HMMSmart_SM00558,HMMPfam_JmjN,HMMSmart_SM00545,HMMPfam_JmjC	-	pseudogene
LOC100288724	0	genome.wustl.edu	37	7	150311736	150311736	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	7	150311736	150311736	C	T	SNP	LOC100288724	XM_002342806.1	human	genbank	58_37c	-1	model	silent	c.126	p.A42	0.989	HMMPfam_Ion_trans	HMMPfam_Ion_trans	-	no_start_codon
LOC100289649	0	genome.wustl.edu	37	3	36342068	36342068	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	36342068	36342068	A	G	SNP	LOC100289649	XM_002342326.1	human	genbank	58_37c	-1	model	silent	c.450	p.H150	0.000	NULL	NULL	-	no_errors
LOC646214	0	genome.wustl.edu	37	15	21935217	21935221	+	RNA	DEL	AAAAC	AAAAC	-	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	AAAAC	AAAAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	15	21935217	21935221	AAAAC	-	DEL	LOC646214	NR_027053.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000:0.002:0.004:0.004:0.002	-	-	-	pseudogene
MAGEC2	0	genome.wustl.edu	37	X	141291556	141291556	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	X	141291556	141291556	G	C	SNP	MAGEC2	ENST00000406005	human	ensembl	58_37c	-1	known	splice_site	c.66-1	e2-1	0.003	-	-	-	no_start_codon:no_stop_codon
MIR548N	0	genome.wustl.edu	37	7	34980439	34980439	+	RNA	SNP	A	A	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	7	34980439	34980439	A	C	SNP	MIR548N	ENST00000408742	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors
MPL	0	genome.wustl.edu	37	1	43817895	43817895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	1	43817895	43817895	G	A	SNP	MPL	NM_005373.2	human	genbank	58_37c	+1	reviewed	missense	c.1574	p.R525K	1.000	NULL	PatternScan_HEMATOPO_REC_L_F1,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_EpoR_lig-bind	-	no_errors
MUC5B	0	genome.wustl.edu	37	11	1266537	1266537	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	11	1266537	1266537	G	T	SNP	MUC5B	NM_002458.1	human	genbank	58_37c	+1	validated	silent	c.8436	p.L2812	0.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
MUSTN1	0	genome.wustl.edu	37	3	52867422	52867422	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	52867422	52867422	G	A	SNP	MUSTN1	NM_205853.2	human	genbank	58_37c	-1	validated	missense	c.167	p.S56L	0.977	NULL	NULL	-	no_errors
PHKA1	0	genome.wustl.edu	37	X	71873364	71873372	+	In_Frame_Del	DEL	TCTTTATAT	TCTTTATAT	-	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	TCTTTATAT	TCTTTATAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	X	71873364	71873372	TCTTTATAT	-	DEL	PHKA1	NM_002637.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1058_1050	p.YKE351in_frame_del	1.000:1.000:1.000:1.000:0.998:0.997:1.000:1.000:1.000	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
PLCH1	0	genome.wustl.edu	37	3	155201158	155201158	+	Silent	SNP	G	G	T	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	155201158	155201158	G	T	SNP	PLCH1	NM_001130961.1	human	genbank	58_37c	-1	validated	silent	c.3006	p.I1002	1.000	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,HMMSmart_EFh,superfamily_C2_CaLB,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
POM121L10P	0	genome.wustl.edu	37	22	25043098	25043098	+	RNA	SNP	G	G	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	22	25043098	25043098	G	C	SNP	POM121L10P	NR_024593.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
POTEG	0	genome.wustl.edu	37	14	19553494	19553494	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	14	19553494	19553494	G	A	SNP	POTEG	NM_001005356.2	human	genbank	58_37c	+1	validated	silent	c.78	p.K26	0.043	NULL	HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
RALBP1	0	genome.wustl.edu	37	18	9525780	9525780	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	18	9525780	9525780	A	C	SNP	RALBP1	NM_006788.3	human	genbank	58_37c	+1	validated	missense	c.1278	p.E426D	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
SEPP1	0	genome.wustl.edu	37	5	42808360	42808361	+	Frame_Shift_Ins	INS	-	-	TACA	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	5	42808360	42808361	-	TACA	INS	SEPP1	NM_001093726.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.186_185	p.A63fs	0.491:0.988	HMMPfam_SelP_N	HMMPfam_SelP_N,HMMPfam_SelP_C	-	pseudogene
VCAM1	0	genome.wustl.edu	37	1	101190339	101190339	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	1	101190339	101190339	C	A	SNP	VCAM1	NM_001078.2	human	genbank	58_37c	+1	reviewed	missense	c.821	p.A274E	1.000	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
ZXDC	0	genome.wustl.edu	37	3	126160731	126160731	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A1KC-01B-11D-A159-09	TCGA-B6-A1KC-10A-01W-A14R-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fc3e822f-150d-47a7-a346-10919b42aa8c	1fd8eddb-6c79-4a27-917a-f710225a589d	3	126160731	126160731	G	C	SNP	ZXDC	NM_025112.4	human	genbank	58_37c	-1	validated	missense	c.2271	p.F757L	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
