Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB7	22	genome.wustl.edu	37	X	74296386	74296386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	74296386	74296386	G	A	SNP	ABCB7	NM_004299.3	human	genbank	58_37c	-1	reviewed	missense	c.560	p.A187V	1.000	HMMPfam_ABC_membrane,superfamily_ABC_TM_1	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_ABC_TM_1,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ADCY8	114	genome.wustl.edu	37	8	131826458	131826458	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	8	131826458	131826458	G	A	SNP	ADCY8	NM_001115.2	human	genbank	58_37c	-1	reviewed	missense	c.2770	p.R924C	1.000	NULL	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ANAPC5	51433	genome.wustl.edu	37	12	121775176	121775176	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	12	121775176	121775176	T	A	SNP	ANAPC5	NM_016237.4	human	genbank	58_37c	-1	reviewed	missense	c.677	p.D226V	1.000	NULL	HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
ANKRD50	57182	genome.wustl.edu	37	4	125593120	125593120	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	4	125593120	125593120	T	C	SNP	ANKRD50	NM_020337.2	human	genbank	58_37c	-1	validated	missense	c.1312	p.M438V	0.998	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
ARHGAP6	395	genome.wustl.edu	37	X	11162155	11162155	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	11162155	11162155	G	A	SNP	ARHGAP6	NM_013427.2	human	genbank	58_37c	-1	reviewed	silent	c.2121	p.G707	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
ARHGEF9	23229	genome.wustl.edu	37	X	62917109	62917109	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	62917109	62917109	C	T	SNP	ARHGEF9	NM_015185.2	human	genbank	58_37c	-1	reviewed	missense	c.457	p.E153K	1.000	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
CARD9	64170	genome.wustl.edu	37	9	139266463	139266463	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	9	139266463	139266463	G	A	SNP	CARD9	NM_052813.4	human	genbank	58_37c	-1	reviewed	missense	c.68	p.S23L	0.765	HMMPfam_CARD,superfamily_DEATH domain	HMMPfam_CARD,superfamily_DEATH domain	-	no_errors
CCR1	1230	genome.wustl.edu	37	3	46244889	46244889	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	3	46244889	46244889	C	T	SNP	CCR1	NM_001295.2	human	genbank	58_37c	-1	reviewed	missense	c.916	p.E306K	0.988	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
CD97	976	genome.wustl.edu	37	19	14517708	14517708	+	Missense_Mutation	SNP	G	G	A	rs145308566	byCluster;byFrequency;by1000genomes	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	19	14517708	14517708	G	A	SNP	CD97	NM_078481.2	human	genbank	58_37c	+1	reviewed	missense	c.2143	p.V715I	0.975	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_G_PROTEIN_RECEP_F2_2,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_Family A G protein-coupled receptor-like	-	no_errors
CDC37L1	55664	genome.wustl.edu	37	9	4697194	4697194	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	9	4697194	4697194	C	T	SNP	CDC37L1	NM_017913.2	human	genbank	58_37c	+1	validated	missense	c.607	p.H203Y	1.000	HMMPfam_CDC37_M,superfamily_SSF101391	HMMPfam_CDC37_N,HMMPfam_CDC37_M,superfamily_SSF101391	-	no_errors
CHD1	1105	genome.wustl.edu	37	5	98235337	98235337	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	5	98235337	98235337	T	C	SNP	CHD1	NM_001270.2	human	genbank	58_37c	-1	reviewed	missense	c.932	p.K311R	1.000	HMMSmart_SM00298,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_Homeodomain-like,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CLDN5	7122	genome.wustl.edu	37	22	19511619	19511619	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-11A-13D-A10Y-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	96629b51-8ce6-4a2d-add3-3cd5c1a5c9dc	22	19511619	19511619	A	G	SNP	CLDN5	NM_001130861.1	human	genbank	58_37c	-1	reviewed	missense	c.415	p.C139R	1.000	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75834939	75834939	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	6	75834939	75834939	A	C	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	missense	c.6511	p.L2171V	0.268	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
DDX27	55661	genome.wustl.edu	37	20	47855789	47855789	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	20	47855789	47855789	G	A	SNP	DDX27	NM_017895.7	human	genbank	58_37c	+1	reviewed	missense	c.1904	p.R635Q	0.895	NULL	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GHITM	27069	genome.wustl.edu	37	10	85902493	85902493	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	10	85902493	85902493	T	C	SNP	GHITM	NM_014394.2	human	genbank	58_37c	+1	validated	missense	c.212	p.M71T	0.103	NULL	HMMPfam_UPF0005	-	no_errors
GNAI2	2771	genome.wustl.edu	37	3	50273876	50273876	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	3	50273876	50273876	C	A	SNP	GNAI2	NM_002070.2	human	genbank	58_37c	+1	reviewed	missense	c.109	p.L37M	1.000	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HRNR	388697	genome.wustl.edu	37	1	152185679	152185679	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	1	152185679	152185679	C	A	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	missense	c.8426	p.G2809V	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
KCNQ5	56479	genome.wustl.edu	37	6	73787062	73787062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	6	73787062	73787062	G	A	SNP	KCNQ5	NM_019842.3	human	genbank	58_37c	+1	reviewed	missense	c.634	p.A212T	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_Voltage-gated potassium channels	-	no_errors
KDM6A	7403	genome.wustl.edu	37	X	44894229	44894232	+	Frame_Shift_Del	DEL	AAGT	AAGT	-	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	AAGT	AAGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	44894229	44894232	AAGT	-	DEL	KDM6A	NM_021140.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.618_619	p.E206fs	1.000:1.000	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452	HMMPfam_TPR_1,HMMSmart_JmjC,HMMPfam_JmjC,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
L3MBTL2	83746	genome.wustl.edu	37	22	41605850	41605850	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	22	41605850	41605850	C	T	SNP	L3MBTL2	NM_031488.4	human	genbank	58_37c	+1	validated	missense	c.175	p.R59W	0.973	NULL	HMMPfam_MBT,HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT	-	no_errors
LAMA5	3911	genome.wustl.edu	37	20	60912928	60912928	+	Missense_Mutation	SNP	C	C	T	rs139977032	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	20	60912928	60912928	C	T	SNP	LAMA5	NM_005560.3	human	genbank	58_37c	-1	reviewed	missense	c.1958	p.R653H	0.026	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin	HMMPfam_Laminin_B,PatternScan_TNFR_NGFR_1,HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00281,superfamily_EGF/Laminin	-	no_errors
LAMB4	22798	genome.wustl.edu	37	7	107688451	107688451	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	7	107688451	107688451	C	T	SNP	LAMB4	NM_007356.2	human	genbank	58_37c	-1	validated	missense	c.4228	p.G1410S	0.214	NULL	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_SM00136,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
LOC100131482	0	genome.wustl.edu	37	2	180679175	180679175	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	2	180679175	180679175	A	T	SNP	LOC100131482	XM_001722616.1	human	genbank	58_37c	+1	model	silent	c.198	p.V66	1.000	HMMPfam_DIM1,superfamily_Thioredoxin-like	HMMPfam_DIM1,superfamily_Thioredoxin-like	-	no_errors
LTBP1	4052	genome.wustl.edu	37	2	33500981	33500981	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	2	33500981	33500981	C	G	SNP	LTBP1	NM_206943.2	human	genbank	58_37c	+1	reviewed	missense	c.2986	p.R996G	0.116	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
MCART6	401612	genome.wustl.edu	37	X	103349780	103349780	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	103349780	103349780	C	T	SNP	MCART6	NM_001012755.3	human	genbank	58_37c	-1	validated	missense	c.161	p.R54Q	1.000	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors
MUC5B	727897	genome.wustl.edu	37	11	1155537	1155537	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	11	1155537	1155537	G	A	SNP	MUC5B	ENST00000406844	human	ensembl	58_37c	+1	known	silent	c.225	p.A75	0.000	HMMSmart_SM00216	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
MYL12A	10627	genome.wustl.edu	37	18	3253901	3253901	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	18	3253901	3253901	G	A	SNP	MYL12A	NM_006471.2	human	genbank	58_37c	+1	provisional	missense	c.196	p.D66N	1.000	superfamily_EF-hand	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
MYL12A	10627	genome.wustl.edu	37	18	3254033	3254033	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	18	3254033	3254033	G	C	SNP	MYL12A	NM_006471.2	human	genbank	58_37c	+1	provisional	missense	c.328	p.D110H	1.000	HMMSmart_SM00054,superfamily_EF-hand	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
NDUFA1	4694	genome.wustl.edu	37	X	119005892	119005892	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	119005892	119005892	C	T	SNP	NDUFA1	NM_004541.3	human	genbank	58_37c	+1	reviewed	silent	c.18	p.L6	0.799	NULL	NULL	-	no_errors
NUDT7	0	genome.wustl.edu	37	16	77759477	77759477	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	16	77759477	77759477	A	G	SNP	NUDT7	NM_001105663.1	human	genbank	58_37c	+1	reviewed	missense	c.185	p.E62G	1.000	PatternScan_UPF0035,HMMPfam_NUDIX,superfamily_NUDIX_hydrolase	PatternScan_UPF0035,HMMPfam_NUDIX,superfamily_NUDIX_hydrolase,PatternScan_NUDIX	-	no_errors
OR4C15	81309	genome.wustl.edu	37	11	55322145	55322145	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	11	55322145	55322145	C	T	SNP	OR4C15	NM_001001920.1	human	genbank	58_37c	+1	provisional	silent	c.363	p.F121	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_LECTIN_LEGUME_ALPHA,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCDH17	27253	genome.wustl.edu	37	13	58208939	58208939	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	13	58208939	58208939	T	A	SNP	PCDH17	NM_001040429.2	human	genbank	58_37c	+1	reviewed	silent	c.2259	p.G753	1.000	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDXDC1	23042	genome.wustl.edu	37	16	15100357	15100357	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	16	15100357	15100357	T	C	SNP	PDXDC1	NM_015027.2	human	genbank	58_37c	+1	validated	missense	c.496	p.F166L	0.998	superfamily_PLP-dependent transferases	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLE	5426	genome.wustl.edu	37	12	133253205	133253205	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	12	133253205	133253205	G	T	SNP	POLE	NM_006231.2	human	genbank	58_37c	-1	validated	missense	c.836	p.T279N	1.000	HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_RNaseH_fold	HMMPfam_DNA_pol_B_exo,HMMPfam_DNA_pol_B,HMMSmart_POLBc,superfamily_RNaseH_fold,HMMPfam_DUF1744,superfamily_SSF56672	-	no_errors
PTCHD1	139411	genome.wustl.edu	37	X	23353126	23353126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	X	23353126	23353126	G	A	SNP	PTCHD1	NM_173495.2	human	genbank	58_37c	+1	validated	missense	c.134	p.R45H	1.000	NULL	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
SEC16B	89866	genome.wustl.edu	37	1	177911130	177911130	+	Missense_Mutation	SNP	C	C	T	rs139593986	by1000genomes	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	1	177911130	177911130	C	T	SNP	SEC16B	NM_033127.2	human	genbank	58_37c	-1	validated	missense	c.1927	p.V643M	0.015	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors
SLITRK6	84189	genome.wustl.edu	37	13	86369908	86369908	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	13	86369908	86369908	C	A	SNP	SLITRK6	NM_032229.2	human	genbank	58_37c	-1	validated	missense	c.736	p.V246F	1.000	HMMPfam_LRRCT,HMMSmart_SM00082,superfamily_L domain-like	HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
SNTB1	6641	genome.wustl.edu	37	8	121823729	121823729	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	8	121823729	121823729	C	G	SNP	SNTB1	NM_021021.3	human	genbank	58_37c	-1	reviewed	missense	c.355	p.E119Q	1.000	HMMPfam_PDZ,superfamily_PDZ domain-like,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
SPTLC2	9517	genome.wustl.edu	37	14	78043232	78043232	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	14	78043232	78043232	A	C	SNP	SPTLC2	NM_004863.2	human	genbank	58_37c	-1	validated	missense	c.509	p.V170G	1.000	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	PatternScan_AA_TRANSFER_CLASS_2,HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577081	7577081	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	17	7577081	7577081	T	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.857	p.E286A	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179463325	179463325	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	2	179463325	179463325	G	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.49309	p.L16437M	0.548	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
VWA5B1	127731	genome.wustl.edu	37	1	20656786	20656786	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	1	20656786	20656786	C	G	SNP	VWA5B1	NM_001039500.2	human	genbank	58_37c	+1	validated	missense	c.1368	p.H456Q	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	-	no_errors
ZNF320	162967	genome.wustl.edu	37	19	53384563	53384563	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0DL-01A-11D-A10Y-09	TCGA-BH-A0DL-10A-01D-A110-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	6d1b5971-5b99-41a9-9a7d-79adc0d6dd5f	261ed647-077d-4071-978f-ca030947436b	19	53384563	53384563	A	G	SNP	ZNF320	NM_207333.2	human	genbank	58_37c	-1	validated	silent	c.816	p.P272	0.441	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
