Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AAAS	8086	genome.wustl.edu	37	12	53702291	53702291	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	53702291	53702291	C	T	SNP	AAAS	NM_015665.5	human	genbank	58_37c	-1	reviewed	missense	c.1109	p.G370E	1.000	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ALPK1	80216	genome.wustl.edu	37	4	113333139	113333139	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	113333139	113333139	C	T	SNP	ALPK1	NM_001102406.1	human	genbank	58_37c	+1	validated	missense	c.433	p.P145S	1.000	NULL	HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like)	-	no_errors
AP2A1	160	genome.wustl.edu	37	19	50295238	50295238	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	50295238	50295238	C	T	SNP	AP2A1	NM_014203.2	human	genbank	58_37c	+1	reviewed	nonsense	c.520	p.R174*	1.000	HMMPfam_Adaptin_N,superfamily_ARM repeat	HMMPfam_Adaptin_N,HMMPfam_Alpha_adaptin_C,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_Subdomain of clathrin and coatomer appendage domain,superfamily_Clathrin adaptor appendage domain,superfamily_ARM repeat	-	no_errors
ASB17	127247	genome.wustl.edu	37	1	76387978	76387978	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	76387978	76387978	C	T	SNP	ASB17	NM_080868.2	human	genbank	58_37c	-1	validated	silent	c.468	p.Q156	1.000	NULL	HMMPfam_SOCS_box	-	no_errors
ASXL3	80816	genome.wustl.edu	37	18	31325065	31325065	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	18	31325065	31325065	G	C	SNP	ASXL3	NM_030632.1	human	genbank	58_37c	+1	provisional	silent	c.5253	p.T1751	0.846	NULL	NULL	-	no_errors
ATXN2L	11273	genome.wustl.edu	37	16	28842013	28842013	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	16	28842013	28842013	G	A	SNP	ATXN2L	NM_148414.1	human	genbank	58_37c	+1	reviewed	missense	c.1112	p.G371D	0.991	NULL	HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48694930	48694930	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	48694930	48694930	G	A	SNP	CACNA1G	NM_018896.3	human	genbank	58_37c	+1	validated	missense	c.5153	p.R1718Q	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CNDP1	84735	genome.wustl.edu	37	18	72244205	72244205	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	18	72244205	72244205	C	G	SNP	CNDP1	NM_032649.5	human	genbank	58_37c	+1	reviewed	missense	c.943	p.L315V	0.653	HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Bacterial exopeptidase dimerisation domain,superfamily_Zn-dependent exopeptidases	PatternScan_ARGE_DAPE_CPG2_2,HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Bacterial exopeptidase dimerisation domain,superfamily_Zn-dependent exopeptidases	-	no_errors
CPXM1	56265	genome.wustl.edu	37	20	2774888	2774888	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	20	2774888	2774888	A	C	SNP	CPXM1	NM_019609.4	human	genbank	58_37c	-1	reviewed	missense	c.2153	p.V718G	0.999	superfamily_Carboxypeptidase regulatory domain	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,HMMPfam_Peptidase_M14,HMMSmart_SM00631,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,superfamily_Carboxypeptidase regulatory domain,superfamily_Galactose-binding domain-like,superfamily_Zn-dependent exopeptidases	-	no_errors
EGFLAM	133584	genome.wustl.edu	37	5	38407032	38407032	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	38407032	38407032	C	G	SNP	EGFLAM	NM_152403.2	human	genbank	58_37c	+1	validated	missense	c.931	p.P311A	0.002	NULL	HMMSmart_LamG,HMMPfam_fn3,HMMSmart_FN3,HMMPfam_EGF,HMMSmart_EGF,superfamily_FN_III-like,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
ENSG00000244834	0	genome.wustl.edu	37	19	2933327	2933327	+	RNA	SNP	A	A	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	2933327	2933327	A	C	SNP	ZNF77	NM_021217.2	human	genbank	58_37c	-1	validated	3_prime_untranslated_region	c.*160	NULL	0.001	-	-	-	no_errors
ENSG00000246407	0	genome.wustl.edu	37	12	8393287	8393287	+	RNA	SNP	T	T	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	8393287	8393287	T	A	SNP	ENSG00000246407	ENST00000499592	human	ensembl	58_37c	-1	known	intronic	c.NULL	NULL	0.245	-	-	-	no_errors
EP400	57634	genome.wustl.edu	37	12	132529374	132529374	+	Silent	SNP	C	C	T	rs147763834	byFrequency	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	132529374	132529374	C	T	SNP	EP400	NM_015409.3	human	genbank	58_37c	+1	validated	silent	c.6657	p.D2219	0.997	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,superfamily_Homeodomain_like,HMMSmart_HSA,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
ERCC5	2073	genome.wustl.edu	37	13	103504559	103504559	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	13	103504559	103504559	T	G	SNP	ERCC5	NM_000123.2	human	genbank	58_37c	+1	reviewed	missense	c.180	p.H60Q	1.000	HMMPfam_XPG_N,HMMSmart_SM00485,superfamily_PIN domain-like	HMMPfam_XPG_N,HMMSmart_SM00485,HMMPfam_XPG_I,HMMSmart_SM00484,PatternScan_XPG_2,HMMSmart_SM00279,PatternScan_XPG_1,superfamily_5' to 3' exonuclease C-terminal subdomain,superfamily_PIN domain-like	-	no_errors
ESRRG	2104	genome.wustl.edu	37	1	216737742	216737742	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	216737742	216737742	C	T	SNP	ESRRG	ENST00000366937	human	ensembl	58_37c	-1	known	silent	c.717	p.L239	1.000	superfamily_Nuclear receptor ligand-binding domain	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
FAM171A1	221061	genome.wustl.edu	37	10	15256542	15256543	+	Frame_Shift_Ins	INS	-	-	TG	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	15256542	15256543	-	TG	INS	FAM171A1	NM_001010924.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1045_1044	p.E348fs	0.999:0.486	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAT2	2196	genome.wustl.edu	37	5	150947878	150947878	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	150947878	150947878	C	T	SNP	FAT2	NM_001447.2	human	genbank	58_37c	-1	reviewed	silent	c.615	p.V205	0.622	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
FBXO8	26269	genome.wustl.edu	37	4	175184103	175184103	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	175184103	175184103	G	T	SNP	FBXO8	NM_012180.2	human	genbank	58_37c	-1	reviewed	silent	c.141	p.V47	1.000	NULL	HMMPfam_Sec7,HMMSmart_SM00222,superfamily_Sec7 domain,HMMPfam_F-box,superfamily_F-box domain	-	no_errors
FMO3	2328	genome.wustl.edu	37	1	171086238	171086238	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	171086238	171086238	A	T	SNP	FMO3	NM_001002294.2	human	genbank	58_37c	+1	reviewed	splice_site	c.1257-2	e8-2	0.998	-	-	-	no_errors
GADL1	339896	genome.wustl.edu	37	3	30769808	30769808	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	3	30769808	30769808	T	A	SNP	GADL1	NM_207359.2	human	genbank	58_37c	-1	validated	missense	c.1492	p.I498F	1.000	superfamily_PLP-dependent transferases	HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC,superfamily_PLP-dependent transferases	-	no_errors
HAS3	3038	genome.wustl.edu	37	16	69143684	69143684	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	16	69143684	69143684	A	G	SNP	HAS3	NM_005329.2	human	genbank	58_37c	+1	reviewed	missense	c.386	p.D129G	0.998	superfamily_SSF53448	HMMPfam_Glycos_transf_2,superfamily_SSF53448	-	no_errors
HELZ	9931	genome.wustl.edu	37	17	65074482	65074482	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	65074482	65074482	C	T	SNP	HELZ	NM_014877.3	human	genbank	58_37c	-1	validated	silent	c.5715	p.K1905	1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMPfam_PAM2,superfamily_SSF52540,superfamily_SSF90229	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	185964013	185964013	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	185964013	185964013	C	T	SNP	HMCN1	NM_031935.2	human	genbank	58_37c	+1	reviewed	missense	c.3572	p.P1191L	0.970	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	PatternScan_ASX_HYDROXYL,PatternScan_CECROPIN,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_I-set,HMMPfam_ig,PatternScan_EGF_CA,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	185985185	185985185	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	185985185	185985185	C	A	SNP	HMCN1	NM_031935.2	human	genbank	58_37c	+1	reviewed	missense	c.5005	p.P1669T	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	PatternScan_ASX_HYDROXYL,PatternScan_CECROPIN,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_I-set,HMMPfam_ig,PatternScan_EGF_CA,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
IDI1	3422	genome.wustl.edu	37	10	1087317	1087317	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	1087317	1087317	G	T	SNP	IDI1	NM_004508.2	human	genbank	58_37c	-1	validated	missense	c.665	p.P222H	1.000	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase	-	no_errors
LOC100288809	0	genome.wustl.edu	37	12	53201094	53201094	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	53201094	53201094	G	A	SNP	LOC100288809	XM_002343167.1	human	genbank	58_37c	+1	model	missense	c.170	p.G57D	0.001	NULL	NULL	-	no_errors
LOC341378	341378	genome.wustl.edu	37	12	106565245	106565245	+	Missense_Mutation	SNP	C	C	T	rs183001924	by1000genomes	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	106565245	106565245	C	T	SNP	LOC341378	XM_001715424.1	human	genbank	58_37c	+1	model	missense	c.89	p.A30V	0.001	NULL	NULL	-	no_errors
LOC644578	644578	genome.wustl.edu	37	4	64216347	64216347	+	Missense_Mutation	SNP	G	G	A	rs139256331	by1000genomes	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	4	64216347	64216347	G	A	SNP	LOC644578	XM_927694.2	human	genbank	58_37c	+1	model	missense	c.680	p.R227H	0.012	"HMMPfam_La,HMMSmart_SM00715,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_La,HMMSmart_SM00715,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
LRRC16B	90668	genome.wustl.edu	37	14	24525586	24525586	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	24525586	24525586	C	T	SNP	LRRC16B	NM_138360.3	human	genbank	58_37c	+1	validated	silent	c.849	p.N283	1.000	HMMSmart_SM00368,superfamily_RNI-like	HMMSmart_SM00368,superfamily_RNI-like	-	no_errors
MACF1	23499	genome.wustl.edu	37	1	39888058	39888058	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	39888058	39888058	G	C	SNP	MACF1	NM_033044.2	human	genbank	58_37c	+1	reviewed	missense	c.11149	p.E3717Q	1.000	HMMPfam_Spectrin,HMMSmart_SPEC	HMMPfam_Plectin,HMMSmart_PLEC,HMMPfam_Spectrin,HMMSmart_EFh,HMMPfam_GAS2,HMMSmart_GAS2,PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SPEC,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin,superfamily_SSF47473,superfamily_SSF75399	-	no_errors
MCRS1	10445	genome.wustl.edu	37	12	49956786	49956786	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	49956786	49956786	G	C	SNP	MCRS1	NM_001012300.1	human	genbank	58_37c	-1	validated	missense	c.842	p.T281R	1.000	NULL	HMMPfam_FHA,HMMSmart_FHA,superfamily_SMAD_FHA	-	no_errors
MYH7	4625	genome.wustl.edu	37	14	23886884	23886884	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	23886884	23886884	G	A	SNP	MYH7	NM_000257.2	human	genbank	58_37c	-1	reviewed	missense	c.4181	p.A1394V	1.000	HMMPfam_Myosin_tail_1,superfamily_Prefoldin	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYT1L	23040	genome.wustl.edu	37	2	1812867	1812867	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	2	1812867	1812867	G	A	SNP	MYT1L	NM_015025.2	human	genbank	58_37c	-1	validated	silent	c.3147	p.I1049	1.000	NULL	HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1,superfamily_SSF103637	-	no_errors
NBPF14	25832	genome.wustl.edu	37	1	148011766	148011768	+	In_Frame_Del	DEL	CCC	CCC	-	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	CCC	CCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	148011766	148011768	CCC	-	DEL	NBPF14	NM_015383.1	human	genbank	58_37c	-1	predicted	in_frame_del	c.1479_1477	p.G493in_frame_del	0.189:0.191:0.192	NULL	HMMPfam_DUF1220	-	no_errors
NUP210L	91181	genome.wustl.edu	37	1	153991518	153991518	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	153991518	153991518	G	C	SNP	NUP210L	NM_207308.2	human	genbank	58_37c	-1	validated	missense	c.4544	p.A1515G	0.049	NULL	HMMPfam_Big_2,HMMSmart_BID_2,superfamily_Invasin_intimin	-	no_errors
OPLAH	26873	genome.wustl.edu	37	8	145114873	145114873	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	8	145114873	145114873	G	T	SNP	OPLAH	ENST00000426825	human	ensembl	58_37c	-1	known	silent	c.63	p.V21	1.000	HMMPfam_Hydant_A_N	HMMPfam_Hydantoinase_A,HMMPfam_Hydantoinase_B,HMMPfam_Hydant_A_N	-	no_errors
PCDHB6	56130	genome.wustl.edu	37	5	140530844	140530844	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	140530844	140530844	C	G	SNP	PCDHB6	NM_018939.2	human	genbank	58_37c	+1	reviewed	missense	c.1006	p.L336V	0.000	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCDHGB4	8641	genome.wustl.edu	37	5	140769020	140769020	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	140769020	140769020	G	T	SNP	PCDHGB4	NM_003736.2	human	genbank	58_37c	+1	reviewed	silent	c.1569	p.L523	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PLA2R1	22925	genome.wustl.edu	37	2	160885378	160885378	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	2	160885378	160885378	T	C	SNP	PLA2R1	NM_007366.3	human	genbank	58_37c	-1	validated	missense	c.938	p.Y313C	0.016	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,HMMSmart_SM00458,HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_Ricin B-like lectins,superfamily_Kringle-like,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
PPEF1	5475	genome.wustl.edu	37	X	18822016	18822016	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	18822016	18822016	G	C	SNP	PPEF1	NM_006240.2	human	genbank	58_37c	+1	reviewed	missense	c.1072	p.D358H	0.958	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_IQ,HMMSmart_SM00015,HMMSmart_SM00054,HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,HMMPfam_PPP5,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_Metallo-dependent phosphatases	-	no_errors
PRKCQ	5588	genome.wustl.edu	37	10	6472861	6472861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	10	6472861	6472861	C	T	SNP	PRKCQ	NM_006257.2	human	genbank	58_37c	-1	reviewed	missense	c.1876	p.G626R	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_Cysteine-rich domain	-	no_errors
PRMT5	10419	genome.wustl.edu	37	14	23391766	23391766	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	23391766	23391766	G	A	SNP	PRMT5	NM_006109.3	human	genbank	58_37c	-1	validated	missense	c.1582	p.P528S	1.000	HMMPfam_PRMT5,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PRMT5,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
PTPN6	5777	genome.wustl.edu	37	12	7069339	7069339	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	12	7069339	7069339	G	A	SNP	PTPN6	NM_080549.3	human	genbank	58_37c	+1	reviewed	silent	c.1518	p.K506	1.000	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_SH2,HMMSmart_SM00252,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_SH2 domain	-	no_errors
RPGR	6103	genome.wustl.edu	37	X	38160625	38160625	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	38160625	38160625	C	A	SNP	RPGR	NM_001034853.1	human	genbank	58_37c	-1	reviewed	splice_site	c.935-1	e9-1	1.000	-	-	-	no_errors
SEMA5A	9037	genome.wustl.edu	37	5	9154711	9154711	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	5	9154711	9154711	T	A	SNP	SEMA5A	NM_003966.2	human	genbank	58_37c	-1	reviewed	missense	c.1370	p.E457V	1.000	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold	-	no_errors
SHANK2	22941	genome.wustl.edu	37	11	70331861	70331861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	11	70331861	70331861	C	T	SNP	SHANK2	NM_012309.3	human	genbank	58_37c	-1	reviewed	missense	c.2752	p.V918M	1.000	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_SAM_1,HMMSmart_SAM,superfamily_SAM_homology	-	no_errors
SPSB3	90864	genome.wustl.edu	37	16	1827142	1827142	+	Missense_Mutation	SNP	G	C	C	rs146172097	byCluster;by1000genomes	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	16	1827142	1827142	G	C	SNP	SPSB3	NM_080861.3	human	genbank	58_37c	-1	validated	missense	c.1024	p.R342G	0.065	NULL	HMMPfam_SPRY	-	no_errors
SSRP1	6749	genome.wustl.edu	37	11	57102000	57102000	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	11	57102000	57102000	G	A	SNP	SSRP1	NM_003146.2	human	genbank	58_37c	-1	reviewed	silent	c.177	p.G59	0.993	NULL	HMMPfam_HMG_box,HMMSmart_HMG,HMMPfam_SSrecog,superfamily_HMG-box	-	no_errors
TLR7	51284	genome.wustl.edu	37	X	12905642	12905642	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	X	12905642	12905642	G	A	SNP	TLR7	NM_016562.3	human	genbank	58_37c	+1	reviewed	missense	c.2015	p.G672D	0.528	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain,HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
TNFSF14	8740	genome.wustl.edu	37	19	6669873	6669873	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	6669873	6669873	T	G	SNP	TNFSF14	NM_003807.3	human	genbank	58_37c	-1	reviewed	missense	c.208	p.T70P	0.000	NULL	HMMPfam_TNF,HMMSmart_SM00207,superfamily_TNF-like	-	no_errors
TNIK	23043	genome.wustl.edu	37	3	170819279	170819279	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	3	170819279	170819279	G	T	SNP	TNIK	NM_015028.2	human	genbank	58_37c	-1	validated	silent	c.2550	p.T850	0.940	NULL	HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578525	7578525	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	17	7578525	7578525	G	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.405	p.C135W	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TTC5	91875	genome.wustl.edu	37	14	20764583	20764583	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	14	20764583	20764583	G	C	SNP	TTC5	NM_138376.2	human	genbank	58_37c	-1	validated	missense	c.662	p.S221C	1.000	superfamily_SSF48452	HMMPfam_TPR_1,superfamily_SSF48452	-	no_errors
UACA	55075	genome.wustl.edu	37	15	70949465	70949465	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	15	70949465	70949465	C	A	SNP	UACA	NM_018003.2	human	genbank	58_37c	-1	validated	missense	c.4181	p.G1394V	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_Pox_A_type_inc	-	no_errors
UNC5D	137970	genome.wustl.edu	37	8	35563480	35563480	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	8	35563480	35563480	G	T	SNP	UNC5D	NM_080872.2	human	genbank	58_37c	+1	validated	splice_site	c.1117+1	e8+1	1.000	-	-	-	no_errors
USH2A	7399	genome.wustl.edu	37	1	216390881	216390881	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	1	216390881	216390881	C	G	SNP	USH2A	NM_206933.2	human	genbank	58_37c	-1	reviewed	missense	c.3005	p.C1002S	1.000	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin	HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00560,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
ZNF320	162967	genome.wustl.edu	37	19	53384808	53384808	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	53384808	53384808	A	G	SNP	ZNF320	NM_207333.2	human	genbank	58_37c	-1	validated	missense	c.571	p.C191R	0.802	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF540	163255	genome.wustl.edu	37	19	38103478	38103478	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0HX-01A-21W-A071-09	TCGA-BH-A0HX-10A-02W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	27df78cd-1f39-42f3-92e6-56664d4c472c	ec32084a-c085-4ef6-b50e-212ae61944ec	19	38103478	38103478	C	A	SNP	ZNF540	NM_152606.3	human	genbank	58_37c	+1	validated	missense	c.1297	p.H433N	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
