Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ARHGEF9	0	genome.wustl.edu	37	X	62875545	62875545	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	X	62875545	62875545	C	T	SNP	ARHGEF9	NM_015185.2	human	genbank	58_37c	-1	reviewed	missense	c.1129	p.E377K	1.000	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
C5orf27	0	genome.wustl.edu	37	5	95194554	95194554	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	5	95194554	95194554	T	A	SNP	C5orf27	ENST00000357880	human	ensembl	58_37c	+1	known	missense	c.121	p.W41R	0.000	NULL	NULL	-	no_errors
CRIPAK	0	genome.wustl.edu	37	4	1388375	1388376	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	4	1388375	1388376	-	CA	INS	CRIPAK	NM_175918.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.76_77	p.C27fs	0.039:0.487	NULL	HMMSmart_PostSET	-	no_errors
DDX21	0	genome.wustl.edu	37	10	70737326	70737326	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	10	70737326	70737326	A	G	SNP	DDX21	NM_004728.2	human	genbank	58_37c	+1	reviewed	missense	c.1784	p.K595R	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_DEAD,HMMPfam_GUCT,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DPM1	0	genome.wustl.edu	37	20	49575041	49575041	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	20	49575041	49575041	C	T	SNP	DPM1	NM_003859.1	human	genbank	58_37c	-1	reviewed	missense	c.20	p.S7N	0.000	NULL	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	13928	13928	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	MT	13928	13928	G	A	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.1592	p.S531N	NULL	HMMPfam_NADH5_C	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000198886	0	genome.wustl.edu	37	MT	11426	11426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	MT	11426	11426	G	A	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.667	p.A223T	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000198888	0	genome.wustl.edu	37	MT	3878	3878	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	MT	3878	3878	C	A	SNP	ENSG00000198888	ENST00000361390	human	ensembl	58_37c	+1	known	missense	c.572	p.A191E	NULL	HMMPfam_NADHdh	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_1,PatternScan_COMPLEX1_ND1_2	-	no_stop_codon:mismatch_between_exon_seq_and_reference
ENSG00000205879	0	genome.wustl.edu	37	8	12032471	12032471	+	Silent	SNP	T	T	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	8	12032471	12032471	T	G	SNP	ENSG00000205879	ENST00000382200	human	ensembl	58_37c	-1	known	silent	c.316	p.R106	0.032	NULL	NULL	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1437	1437	+	RNA	SNP	T	T	C	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	MT	1437	1437	T	C	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000215247	0	genome.wustl.edu	37	5	796029	796030	+	Frame_Shift_Ins	INS	-	-	GG	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	5	796029	796030	-	GG	INS	ENSG00000215247	ENST00000343883	human	ensembl	58_37c	-1	known	frame_shift_ins	c.493_492	p.T164fs	0.022:0.004	NULL	NULL	-	no_errors
ENSG00000232657	0	genome.wustl.edu	37	4	49110189	49110193	+	Frame_Shift_Del	DEL	CATTT	CATTT	-	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	CATTT	CATTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	4	49110189	49110193	CATTT	-	DEL	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	frame_shift_del	c.90_86	p.E29fs	0.000:0.000:0.000:0.000:0.000	NULL	NULL	-	no_stop_codon
ENSG00000247397	0	genome.wustl.edu	37	8	12395939	12395939	+	RNA	SNP	C	T	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	8	12395939	12395939	C	T	SNP	ENSG00000247397	ENST00000500162	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.037	-	-	-	no_errors
ENSG00000249291	0	genome.wustl.edu	37	12	92915	92915	+	RNA	SNP	C	C	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	12	92915	92915	C	G	SNP	ENSG00000249291	ENST00000515242	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
GPR55	0	genome.wustl.edu	37	2	231775625	231775625	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	2	231775625	231775625	A	G	SNP	GPR55	NM_005683.3	human	genbank	58_37c	-1	validated	missense	c.53	p.L18P	0.528	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HLA-DRB1	0	genome.wustl.edu	37	6	32549402	32549403	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	6	32549402	32549403	-	T	INS	HLA-DRB1	NM_002124.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.584_583	p.R195fs	0.942:0.950	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726	HMMPfam_MHC_II_beta,PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726	-	no_errors
KIAA0430	0	genome.wustl.edu	37	16	15702158	15702158	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	16	15702158	15702158	T	C	SNP	KIAA0430	NM_014647.3	human	genbank	58_37c	-1	validated	missense	c.4172	p.H1391R	1.000	NULL	HMMSmart_SM00360,HMMPfam_DUF537,superfamily_RNA-binding domain RBD	-	no_errors
LAMC3	0	genome.wustl.edu	37	9	133917083	133917083	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	9	133917083	133917083	G	A	SNP	LAMC3	NM_006059.3	human	genbank	58_37c	+1	reviewed	missense	c.1343	p.C448Y	1.000	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_SSF57196	HMMPfam_Laminin_B,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LOC283685	0	genome.wustl.edu	37	15	23685826	23685828	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	15	23685826	23685828	TCT	-	DEL	LOC283685	XM_002343322.1	human	genbank	58_37c	-1	model	in_frame_del	c.1585_1583	p.K528in_frame_del	0.000:0.000:0.000	NULL	NULL	-	no_errors
LOC402382	0	genome.wustl.edu	37	9	138993332	138993332	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	9	138993332	138993332	C	T	SNP	LOC402382	XM_378090.5	human	genbank	58_37c	+1	model	missense	c.95	p.T32M	0.029	NULL	NULL	-	no_errors
LOC653061	0	genome.wustl.edu	37	15	23602651	23602651	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	15	23602651	23602651	C	G	SNP	LOC653061	XM_002343324.1	human	genbank	58_37c	+1	model	missense	c.206	p.S69C	0.779	NULL	NULL	-	no_errors
MAN1B1	0	genome.wustl.edu	37	9	139996654	139996655	+	Frame_Shift_Del	DEL	CG	CG	-	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	CG	CG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	9	139996654	139996655	CG	-	DEL	MAN1B1	ENST00000371587	human	ensembl	58_37c	+1	known	frame_shift_del	c.1487_1488	p.T496fs	0.989:0.989	PatternScan_THIONIN,HMMPfam_Glyco_hydro_47	PatternScan_THIONIN,HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,PatternScan_PA2_HIS	-	no_stop_codon
MAP3K4	0	genome.wustl.edu	37	6	161519351	161519353	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	6	161519351	161519353	CTG	-	DEL	MAP3K4	NM_005922.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3566_3568	p.A1193in_frame_del	0.857:0.937:0.950	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NUP35	0	genome.wustl.edu	37	2	184023015	184023015	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	2	184023015	184023015	C	A	SNP	NUP35	NM_138285.3	human	genbank	58_37c	+1	reviewed	missense	c.614	p.S205Y	1.000	HMMPfam_MPPN	HMMPfam_MPPN	-	no_errors
ODZ1	0	genome.wustl.edu	37	X	123514548	123514548	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	X	123514548	123514548	C	G	SNP	ODZ1	NM_014253.3	human	genbank	58_37c	-1	reviewed	silent	c.8016	p.G2672	0.001	NULL	HMMPfam_NHL,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_RHS_repeat,HMMPfam_Ten_N,superfamily_N2O_reductase_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_SSF57196	-	no_errors
PCOLCE	0	genome.wustl.edu	37	7	100205270	100205270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	7	100205270	100205270	G	A	SNP	PCOLCE	NM_002593.3	human	genbank	58_37c	+1	reviewed	silent	c.1023	p.A341	0.063	superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643	-	no_errors
PDGFRB	0	genome.wustl.edu	37	5	149513212	149513212	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	5	149513212	149513212	A	G	SNP	PDGFRB	NM_002609.3	human	genbank	58_37c	-1	reviewed	missense	c.871	p.C291R	1.000	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,HMMSmart_IGc2,HMMSmart_IG,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors
PDZD4	0	genome.wustl.edu	37	X	153073934	153073934	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	X	153073934	153073934	G	C	SNP	PDZD4	NM_032512.2	human	genbank	58_37c	-1	provisional	missense	c.177	p.D59E	0.981	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
PRKX	0	genome.wustl.edu	37	X	3544506	3544506	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	X	3544506	3544506	G	T	SNP	PRKX	NM_005044.4	human	genbank	58_37c	-1	reviewed	missense	c.769	p.L257I	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
RALBP1	0	genome.wustl.edu	37	18	9524597	9524597	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	18	9524597	9524597	C	T	SNP	RALBP1	NM_006788.3	human	genbank	58_37c	+1	validated	silent	c.1059	p.S353	1.000	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
SF3B1	0	genome.wustl.edu	37	2	198266834	198266834	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	2	198266834	198266834	T	C	SNP	SF3B1	NM_012433.2	human	genbank	58_37c	-1	reviewed	missense	c.2098	p.K700E	1.000	HMMPfam_HEAT,superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_SF3b1,superfamily_ARM repeat	-	no_errors
SIK3	0	genome.wustl.edu	37	11	116766967	116766967	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	11	116766967	116766967	A	G	SNP	SIK3	NM_025164.3	human	genbank	58_37c	-1	validated	splice_site	c.691+2	e6+2	1.000	-	-	-	no_errors
TARSL2	0	genome.wustl.edu	37	15	102263346	102263346	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	15	102263346	102263346	C	T	SNP	TARSL2	NM_152334.2	human	genbank	58_37c	-1	validated	missense	c.319	p.D107N	0.618	NULL	HMMPfam_tRNA-synt_2b,HMMPfam_TGS,HMMPfam_HGTP_anticodon,superfamily_Anticodon-binding domain of Class II aaRS,superfamily_TGS-like,HMMPfam_tRNA_SAD,superfamily_ThrRS/AlaRS common domain,superfamily_Class II aaRS and biotin synthetases	-	no_errors
TNFRSF9	0	genome.wustl.edu	37	1	7980932	7980932	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	1	7980932	7980932	C	T	SNP	TNFRSF9	NM_001561.4	human	genbank	58_37c	-1	reviewed	missense	c.731	p.R244Q	0.858	NULL	HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_SSF57586	-	no_errors
XDH	0	genome.wustl.edu	37	2	31588379	31588379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A201-01A-11D-A14K-09	TCGA-BH-A201-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	df6e619f-67a5-49f3-9768-4826aa2c9d1b	ec9e0f5b-4363-422c-bdbd-c6eb48504a93	2	31588379	31588379	G	A	SNP	XDH	NM_000379.3	human	genbank	58_37c	-1	reviewed	missense	c.2488	p.R830C	1.000	PatternScan_MOLYBDOPTERIN_EUK,HMMPfam_Ald_Xan_dh_C2,superfamily_Ald_xan_DH_mo_bd	PatternScan_MOLYBDOPTERIN_EUK,HMMPfam_Ald_Xan_dh_C,superfamily_Aldxan_dh_hamm,HMMPfam_Fer2,superfamily_Ferredoxin,HMMPfam_FAD_binding_5,HMMPfam_Fer2_2,superfamily_2Fe-2S_bind,HMMPfam_CO_deh_flav_C,superfamily_CO_deh_flav_C,PatternScan_2FE2S_FER_1,HMMPfam_Ald_Xan_dh_C2,superfamily_Ald_xan_DH_mo_bd,superfamily_FAD-binding_2	-	no_errors
