Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ANGPT4	0	genome.wustl.edu	37	20	858964	858964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	20	858964	858964	C	T	SNP	ANGPT4	NM_015985.2	human	genbank	58_37c	-1	reviewed	missense	c.1060	p.G354R	1.000	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C	HMMPfam_Fibrinogen_C,HMMSmart_FBG,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen_a/b/g_C	-	no_errors
APBB1	0	genome.wustl.edu	37	11	6432090	6432092	+	In_Frame_Del	DEL	TCC	TCC	-	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	TCC	TCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	11	6432090	6432092	TCC	-	DEL	APBB1	NM_001164.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.488_486	p.E162in_frame_del	0.972:0.985:0.889	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
C14orf80	0	genome.wustl.edu	37	14	105960224	105960224	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	14	105960224	105960224	C	T	SNP	C14orf80	NM_001134875.1	human	genbank	58_37c	+1	validated	missense	c.638	p.S213F	0.998	NULL	NULL	-	no_errors
C2orf56	0	genome.wustl.edu	37	2	37458853	37458853	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	2	37458853	37458853	G	A	SNP	C2orf56	NM_144736.4	human	genbank	58_37c	+1	validated	missense	c.5	p.S2N	0.794	NULL	HMMPfam_DUF185	-	no_errors
CALML5	0	genome.wustl.edu	37	10	5541283	5541283	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	10	5541283	5541283	G	A	SNP	CALML5	NM_017422.4	human	genbank	58_37c	-1	reviewed	missense	c.119	p.T40M	0.980	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
CHADL	0	genome.wustl.edu	37	22	41632585	41632585	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	22	41632585	41632585	G	A	SNP	CHADL	NM_138481.1	human	genbank	58_37c	-1	validated	missense	c.1966	p.R656W	0.973	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
CNP	0	genome.wustl.edu	37	17	40125630	40125630	+	Silent	SNP	A	A	C	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	17	40125630	40125630	A	C	SNP	CNP	NM_033133.4	human	genbank	58_37c	+1	validated	silent	c.954	p.S318	0.000	HMMPfam_CNPase,superfamily_LigT-like	HMMPfam_CNPase,superfamily_LigT-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	13556	13556	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	MT	13556	13556	G	A	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	nonsense	c.1220	p.W407*	NULL	NULL	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000214627	0	genome.wustl.edu	37	16	32001750	32001750	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	16	32001750	32001750	C	T	SNP	ENSG00000214627	ENST00000398685	human	ensembl	58_37c	+1	known	silent	c.1092	p.F364	1.000	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMSmart_PH,superfamily_Rho_GAP,superfamily_SSF50729	-	no_errors
EXOC2	0	genome.wustl.edu	37	6	497489	497489	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	6	497489	497489	C	T	SNP	EXOC2	NM_018303.4	human	genbank	58_37c	-1	reviewed	missense	c.2437	p.V813M	1.000	NULL	HMMPfam_TIG,superfamily_Ig_E-set	-	no_errors
FAM48B2	0	genome.wustl.edu	37	X	24330448	24330448	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	X	24330448	24330448	G	A	SNP	FAM48B2	NM_001136233.1	human	genbank	58_37c	-1	provisional	missense	c.985	p.P329S	0.016	NULL	NULL	-	no_errors
FOXA3	0	genome.wustl.edu	37	19	46376150	46376150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	19	46376150	46376150	C	T	SNP	FOXA3	NM_004497.2	human	genbank	58_37c	+1	reviewed	missense	c.887	p.A296V	0.918	NULL	HMMPfam_Fork_head,HMMSmart_FH,HMMPfam_Fork_head_N,PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,HMMPfam_HNF_C,superfamily_SSF46785	-	no_errors
GBA	0	genome.wustl.edu	37	1	155207291	155207291	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	1	155207291	155207291	C	G	SNP	GBA	NM_000157.3	human	genbank	58_37c	-1	reviewed	missense	c.840	p.L280F	0.006	HMMPfam_Glyco_hydro_30,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_30,superfamily_(Trans)glycosidases,superfamily_Glycosyl hydrolase domain	-	no_errors
GOLGA2	0	genome.wustl.edu	37	9	131020796	131020798	+	In_Frame_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	CCT	CCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	9	131020796	131020798	CCT	-	DEL	GOLGA2	NM_004486.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.2146_2144	p.E715in_frame_del	0.000:0.000:0.004	NULL	NULL	-	no_errors
HERPUD2	0	genome.wustl.edu	37	7	35712884	35712884	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	7	35712884	35712884	G	A	SNP	HERPUD2	NM_022373.4	human	genbank	58_37c	-1	validated	missense	c.152	p.T51M	0.998	HMMPfam_ubiquitin,HMMSmart_UBQ,superfamily_SSF54236	HMMPfam_ubiquitin,HMMSmart_UBQ,superfamily_SSF54236	-	no_errors
KRT28	0	genome.wustl.edu	37	17	38950160	38950160	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	17	38950160	38950160	A	G	SNP	KRT28	NM_181535.3	human	genbank	58_37c	-1	reviewed	missense	c.1117	p.Y373H	1.000	HMMPfam_Filament	HMMPfam_Filament	-	no_errors
LOC100288993	0	genome.wustl.edu	37	9	69777689	69777689	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	9	69777689	69777689	G	A	SNP	LOC100288993	XM_002342926.1	human	genbank	58_37c	-1	model	missense	c.2044	p.R682W	0.958	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
LOC642661	0	genome.wustl.edu	37	14	19720284	19720284	+	RNA	SNP	A	C	C	rs7292044	byFrequency	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	14	19720284	19720284	A	C	SNP	LOC642661	XR_016132.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC728264	0	genome.wustl.edu	37	5	148810181	148810181	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	5	148810181	148810181	G	A	SNP	LOC728264	NR_027180.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.004	-	-	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506293	195506293	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	3	195506293	195506293	T	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.11774	p.N3925S	0.001	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506339	195506339	+	Missense_Mutation	SNP	T	T	G	rs145408966	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	3	195506339	195506339	T	G	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.11728	p.T3910P	0.019	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NCOR2	0	genome.wustl.edu	37	12	124824721	124824722	+	In_Frame_Ins	INS	-	-	GCCGCTGCT	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	12	124824721	124824722	-	GCCGCTGCT	INS	NCOR2	NM_006312.3	human	genbank	58_37c	-1	validated	in_frame_ins	c.5539_5538	p.1846in_frame_insSSG	1.000:0.999	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NDFIP2	0	genome.wustl.edu	37	13	80113888	80113888	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	13	80113888	80113888	C	A	SNP	NDFIP2	ENST00000465762	human	ensembl	58_37c	+1	known	missense	c.440	p.A147E	0.947	HMMPfam_DUF2370	HMMPfam_DUF2370	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PANK1	0	genome.wustl.edu	37	10	91353062	91353062	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	10	91353062	91353062	C	T	SNP	PANK1	NM_148977.1	human	genbank	58_37c	-1	reviewed	missense	c.1503	p.M501I	1.000	HMMPfam_Fumble,superfamily_Actin-like ATPase domain	HMMPfam_Fumble,superfamily_Actin-like ATPase domain	-	no_errors
PDS5A	0	genome.wustl.edu	37	4	39881426	39881426	+	Silent	SNP	T	T	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	4	39881426	39881426	T	G	SNP	PDS5A	NM_001100399.1	human	genbank	58_37c	-1	reviewed	silent	c.1914	p.S638	0.938	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
PHC2	0	genome.wustl.edu	37	1	33797902	33797902	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	1	33797902	33797902	G	A	SNP	PHC2	NM_198040.2	human	genbank	58_37c	-1	reviewed	missense	c.1862	p.S621L	0.999	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952063	178952063	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	3	178952063	178952063	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3118	p.M1040V	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T	rs121913279	byCluster	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	3	178952085	178952085	A	T	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047L	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
RAB40A	0	genome.wustl.edu	37	X	102755198	102755198	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	X	102755198	102755198	T	G	SNP	RAB40A	NM_080879.2	human	genbank	58_37c	-1	reviewed	missense	c.487	p.I163L	1.000	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540	HMMPfam_SOCS_box,HMMSmart_SOCS,HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540	-	no_errors
RABL2B	0	genome.wustl.edu	37	22	51220689	51220689	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	22	51220689	51220689	C	G	SNP	RABL2B	NM_001130923.1	human	genbank	58_37c	-1	reviewed	missense	c.34	p.D12H	1.000	NULL	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RIPK3	0	genome.wustl.edu	37	14	24808688	24808688	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	14	24808688	24808688	C	T	SNP	RIPK3	NM_006871.3	human	genbank	58_37c	-1	reviewed	missense	c.136	p.D46N	0.378	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
RRBP1	0	genome.wustl.edu	37	20	17639834	17639834	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	20	17639834	17639834	T	C	SNP	RRBP1	ENST00000246043	human	ensembl	58_37c	-1	known	missense	c.1319	p.K440R	0.247	NULL	HMMPfam_Rib_recp_KP_reg	-	no_errors
SEPT2	0	genome.wustl.edu	37	2	242289558	242289558	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	2	242289558	242289558	G	T	SNP	SEPT2	NM_001008491.1	human	genbank	58_37c	+1	validated	missense	c.1055	p.G352V	0.440	NULL	HMMPfam_Septin,superfamily_SSF52540	-	no_errors
SIGLEC7	0	genome.wustl.edu	37	19	51656410	51656410	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	19	51656410	51656410	G	T	SNP	SIGLEC7	NM_014385.2	human	genbank	58_37c	+1	validated	missense	c.1312	p.A438S	0.047	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
SNF8	0	genome.wustl.edu	37	17	47009050	47009050	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	17	47009050	47009050	G	C	SNP	SNF8	NM_007241.2	human	genbank	58_37c	-1	provisional	missense	c.594	p.I198M	1.000	"HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
SRL	0	genome.wustl.edu	37	16	4245638	4245638	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	16	4245638	4245638	T	G	SNP	SRL	NM_001098814.1	human	genbank	58_37c	-1	validated	missense	c.526	p.I176L	0.998	superfamily_SSF52540	superfamily_SSF52540	-	no_errors
TASP1	0	genome.wustl.edu	37	20	13415695	13415695	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	20	13415695	13415695	A	G	SNP	TASP1	NM_017714.2	human	genbank	58_37c	-1	reviewed	silent	c.1092	p.L364	1.000	superfamily_SSF56235	HMMPfam_Asparaginase_2,superfamily_SSF56235	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578427	7578427	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	17	7578427	7578427	T	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.503	p.H168P	0.995	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TTN	0	genome.wustl.edu	37	2	179598483	179598483	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	2	179598483	179598483	G	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	silent	c.11901	p.D3967	0.997	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
ZC3H7A	0	genome.wustl.edu	37	16	11856527	11856527	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A278-01A-11D-A167-09	TCGA-C8-A278-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7bc48524-1f69-4d85-9d16-6db7844543bd	e8b5251b-f5fe-4c0c-8428-a23e14177ff5	16	11856527	11856527	C	G	SNP	ZC3H7A	NM_014153.2	human	genbank	58_37c	-1	provisional	missense	c.2079	p.Q693H	1.000	NULL	HMMPfam_zf-CCCH,HMMSmart_SM00356,PatternScan_ZINC_FINGER_C2H2_1,superfamily_TPR-like,superfamily_CCCH zinc finger	-	no_errors
