Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ANKRD37	0	genome.wustl.edu	37	4	186318102	186318102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	4	186318102	186318102	G	A	SNP	ANKRD37	ENST00000335174	human	ensembl	58_37c	+1	known	missense	c.25	p.E9K	0.942	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
BAT2L2	0	genome.wustl.edu	37	1	171549015	171549015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	1	171549015	171549015	G	A	SNP	BAT2L2	NM_015172.3	human	genbank	58_37c	+1	validated	missense	c.7315	p.G2439R	1.000	NULL	HMMPfam_BAT2_N	-	no_errors
C14orf129	0	genome.wustl.edu	37	14	96851896	96851896	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	14	96851896	96851896	T	A	SNP	C14orf129	NM_016472.3	human	genbank	58_37c	+1	provisional	missense	c.295	p.L99I	0.004	HMMPfam_DUF727,superfamily_SSF103107	HMMPfam_DUF727,superfamily_SSF103107	-	no_errors
C16orf73	0	genome.wustl.edu	37	16	1889430	1889430	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	16	1889430	1889430	A	G	SNP	C16orf73	NM_152764.2	human	genbank	58_37c	-1	validated	silent	c.1044	p.C348	0.998	NULL	superfamily_Nucleic_acid_OB	-	no_errors
C19orf26	0	genome.wustl.edu	37	19	1235064	1235064	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	19	1235064	1235064	G	A	SNP	C19orf26	NM_152769.2	human	genbank	58_37c	-1	validated	missense	c.373	p.R125W	0.994	NULL	NULL	-	no_errors
C22orf25	0	genome.wustl.edu	37	22	20024370	20024370	+	Missense_Mutation	SNP	G	G	A	rs142149828	byFrequency	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	22	20024370	20024370	G	A	SNP	C22orf25	NM_152906.4	human	genbank	58_37c	+1	validated	missense	c.49	p.A17T	1.000	HMMPfam_DUF833	HMMPfam_DUF833	-	no_errors
C6orf170	0	genome.wustl.edu	37	6	121526246	121526246	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	6	121526246	121526246	C	T	SNP	C6orf170	NM_152730.4	human	genbank	58_37c	-1	validated	missense	c.2545	p.E849K	1.000	NULL	superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
CCDC13	0	genome.wustl.edu	37	3	42777253	42777253	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	3	42777253	42777253	C	T	SNP	CCDC13	NM_144719.3	human	genbank	58_37c	-1	validated	silent	c.1317	p.E439	1.000	NULL	NULL	-	no_errors
CLDN14	0	genome.wustl.edu	37	21	37833546	37833546	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	21	37833546	37833546	G	C	SNP	CLDN14	NM_012130.2	human	genbank	58_37c	-1	reviewed	missense	c.448	p.P150A	1.000	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
CLEC4A	0	genome.wustl.edu	37	12	8288271	8288271	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	12	8288271	8288271	G	A	SNP	CLEC4A	NM_016184.3	human	genbank	58_37c	+1	reviewed	missense	c.389	p.S130N	0.136	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
DCLK3	0	genome.wustl.edu	37	3	36759619	36759619	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	3	36759619	36759619	G	A	SNP	DCLK3	NM_033403.1	human	genbank	58_37c	-1	validated	silent	c.1635	p.I545	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
ENSG00000198763	0	genome.wustl.edu	37	MT	4921	4921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	MT	4921	4921	T	C	SNP	ENSG00000198763	ENST00000361453	human	ensembl	58_37c	+1	known	missense	c.452	p.V151A	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q1,HMMPfam_NADH_dehy_S2_C	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000198763	0	genome.wustl.edu	37	MT	5237	5237	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	MT	5237	5237	G	A	SNP	ENSG00000198763	ENST00000361453	human	ensembl	58_37c	+1	known	silent	c.768	p.P256	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q1,HMMPfam_NADH_dehy_S2_C	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000210082	0	genome.wustl.edu	37	MT	2201	2201	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	MT	2201	2201	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000230135	0	genome.wustl.edu	37	15	83014132	83014132	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	15	83014132	83014132	C	G	SNP	ENSG00000230135	ENST00000449790	human	ensembl	58_37c	-1	known	missense	c.451	p.E151Q	0.991	NULL	NULL	-	no_errors
FAM86B1	0	genome.wustl.edu	37	8	12040786	12040786	+	RNA	SNP	C	C	G	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	8	12040786	12040786	C	G	SNP	FAM86B1	NR_003494.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	no_errors
FMN2	0	genome.wustl.edu	37	1	240371019	240371019	+	Silent	SNP	T	T	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	1	240371019	240371019	T	A	SNP	FMN2	NM_020066.4	human	genbank	58_37c	+1	validated	silent	c.2907	p.P969	0.059	HMMSmart_FH2,HMMPfam_Drf_FH1	HMMSmart_FH2,HMMPfam_Drf_FH1,HMMPfam_FH2,superfamily_FH2_actin_bd	-	no_errors
GLRA3	0	genome.wustl.edu	37	4	175649752	175649752	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	4	175649752	175649752	A	T	SNP	GLRA3	NM_006529.2	human	genbank	58_37c	-1	validated	missense	c.365	p.M122K	1.000	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors
GRIPAP1	0	genome.wustl.edu	37	X	48839811	48839811	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	X	48839811	48839811	C	T	SNP	GRIPAP1	NM_020137.3	human	genbank	58_37c	-1	reviewed	missense	c.1314	p.M438I	0.979	NULL	superfamily_Prefoldin	-	no_errors
INO80	0	genome.wustl.edu	37	15	41372096	41372096	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	15	41372096	41372096	G	A	SNP	INO80	NM_017553.1	human	genbank	58_37c	-1	reviewed	missense	c.934	p.H312Y	1.000	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIAA1751	0	genome.wustl.edu	37	1	1888142	1888142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	1	1888142	1888142	C	T	SNP	KIAA1751	NM_001080484.1	human	genbank	58_37c	-1	predicted	missense	c.1933	p.V645I	0.000	NULL	NULL	-	no_errors
KRTAP5-1	0	genome.wustl.edu	37	11	1605996	1605996	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	11	1605996	1605996	A	C	SNP	KRTAP5-1	NM_001005922.1	human	genbank	58_37c	-1	validated	missense	c.484	p.C162G	0.142	PatternScan_2FE2S_FER_1	PatternScan_VWFC_1,PatternScan_ZN2_CY6_FUNGAL_1,PatternScan_2FE2S_FER_1,PatternScan_MOLYBDOPTERIN_PROK_1,PatternScan_4FE4S_FER_1	-	no_errors
LOC100287354	0	genome.wustl.edu	37	9	68455133	68455133	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	9	68455133	68455133	C	T	SNP	LOC100287354	XM_002344262.1	human	genbank	58_37c	+1	model	silent	c.252	p.A84	0.000	NULL	PatternScan_COX1_CUB	-	no_errors
LOC388692	0	genome.wustl.edu	37	1	149284493	149284493	+	RNA	SNP	T	T	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	1	149284493	149284493	T	C	SNP	LOC388692	NR_027002.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.041	-	-	-	no_errors
MAP3K1	0	genome.wustl.edu	37	5	56177099	56177099	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	5	56177099	56177099	G	T	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	missense	c.2369	p.R790M	1.000	NULL	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MAP3K1	0	genome.wustl.edu	37	5	56179396	56179396	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	5	56179396	56179396	T	A	SNP	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	missense	c.3709	p.Y1237N	0.993	superfamily_Kinase_like	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MFSD11	0	genome.wustl.edu	37	17	74734448	74734448	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	17	74734448	74734448	C	G	SNP	MFSD11	NM_024311.2	human	genbank	58_37c	+1	provisional	missense	c.14	p.S5C	0.404	superfamily_MFS general substrate transporter	HMMPfam_DUF895,superfamily_MFS general substrate transporter	-	no_errors
OR13G1	0	genome.wustl.edu	37	1	247835571	247835571	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	1	247835571	247835571	C	T	SNP	OR13G1	NM_001005487.1	human	genbank	58_37c	-1	provisional	missense	c.773	p.R258H	0.823	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OST4	0	genome.wustl.edu	37	2	27294263	27294265	+	In_Frame_Del	DEL	ACG	ACG	-	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	ACG	ACG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	2	27294263	27294265	ACG	-	DEL	OST4	NM_001134693.1	human	genbank	58_37c	-1	validated	in_frame_del	c.68_66	p.V23in_frame_del	1.000:1.000:0.433	HMMPfam_Ost4,superfamily_Oligosaccharyltransferase subunit ost4p	HMMPfam_Ost4,superfamily_Oligosaccharyltransferase subunit ost4p	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178916926	178916937	+	In_Frame_Del	DEL	GTAGGCAACCGT	GTAGGCAACCGT	-	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	GTAGGCAACCGT	GTAGGCAACCGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	3	178916926	178916937	GTAGGCAACCGT	-	DEL	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.313_324	p.VGNR105in_frame_del	1.000:1.000:0.996:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PKP4	0	genome.wustl.edu	37	2	159481627	159481627	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	2	159481627	159481627	T	G	SNP	PKP4	NM_003628.3	human	genbank	58_37c	+1	reviewed	missense	c.841	p.S281A	1.000	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
PPM1H	0	genome.wustl.edu	37	12	63061084	63061084	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	12	63061084	63061084	T	C	SNP	PPM1H	NM_020700.1	human	genbank	58_37c	-1	validated	missense	c.1271	p.Y424C	0.999	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C	-	no_errors
SLC25A42	0	genome.wustl.edu	37	19	19218751	19218751	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	19	19218751	19218751	G	T	SNP	SLC25A42	NM_178526.3	human	genbank	58_37c	+1	validated	silent	c.546	p.G182	0.459	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC38A10	0	genome.wustl.edu	37	17	79225074	79225075	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	17	79225074	79225075	-	T	INS	SLC38A10	NM_138570.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2284_2283	p.H761fs	0.000:0.000	NULL	HMMPfam_Aa_trans	-	no_errors
SLC6A14	0	genome.wustl.edu	37	X	115585541	115585541	+	Missense_Mutation	SNP	T	T	C	rs146124970	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	X	115585541	115585541	T	C	SNP	SLC6A14	NM_007231.3	human	genbank	58_37c	+1	reviewed	missense	c.1337	p.M446T	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
WDR90	0	genome.wustl.edu	37	16	706010	706011	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	16	706010	706011	-	A	INS	WDR90	ENST00000429287	human	ensembl	58_37c	+1	known	frame_shift_ins	c.2090_2091	p.R698fs	0.000:0.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
WTAP	0	genome.wustl.edu	37	6	160174524	160174524	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	6	160174524	160174524	G	C	SNP	WTAP	NM_004906.3	human	genbank	58_37c	+1	reviewed	missense	c.485	p.R162P	1.000	NULL	NULL	-	no_errors
ZFP112	0	genome.wustl.edu	37	19	44831587	44831587	+	Nonstop_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	19	44831587	44831587	C	A	SNP	ZFP112	NM_001083335.1	human	genbank	58_37c	-1	validated	nonstop	c.2741	p.*914L	0.629	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF461	0	genome.wustl.edu	37	19	37130642	37130642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XB-01A-11D-A14G-09	TCGA-D8-A1XB-10A-01D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e5ca0f82-6fa9-4d54-adc7-385721f351f3	665d057d-7d5f-41ef-98f1-5d71dded62b5	19	37130642	37130642	C	T	SNP	ZNF461	NM_153257.2	human	genbank	58_37c	-1	validated	missense	c.605	p.S202N	0.000	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
