Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AAA1	0	genome.wustl.edu	37	7	34873914	34873914	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	34873914	34873914	G	C	SNP	AAA1	NR_015356.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.002	-	-	-	no_errors
ACER1	0	genome.wustl.edu	37	19	6333478	6333478	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	6333478	6333478	A	T	SNP	ACER1	NM_133492.2	human	genbank	58_37c	-1	validated	missense	c.85	p.Y29N	1.000	HMMPfam_aPHC	HMMPfam_aPHC	-	no_errors
AHCYL1	0	genome.wustl.edu	37	1	110559298	110559298	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	110559298	110559298	G	T	SNP	AHCYL1	NM_006621.4	human	genbank	58_37c	+1	validated	missense	c.909	p.R303S	1.000	HMMPfam_AdoHcyase,HMMPfam_AdoHcyase_NAD,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Formate/glycerate dehydrogenase catalytic domain-like	HMMPfam_AdoHcyase,HMMPfam_AdoHcyase_NAD,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_ADOHCYASE_1,PatternScan_ADOHCYASE_2,superfamily_Formate/glycerate dehydrogenase catalytic domain-like	-	no_errors
AKR1D1	0	genome.wustl.edu	37	7	137776547	137776547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	137776547	137776547	C	T	SNP	AKR1D1	NM_005989.2	human	genbank	58_37c	+1	validated	missense	c.295	p.R99C	0.006	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red,PatternScan_ALDOKETO_REDUCTASE_2,PatternScan_ALDOKETO_REDUCTASE_3,PatternScan_ALDOKETO_REDUCTASE_1	-	no_errors
ALG9	0	genome.wustl.edu	37	11	111680367	111680367	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	111680367	111680367	C	G	SNP	ALG9	NM_024740.2	human	genbank	58_37c	-1	reviewed	missense	c.1733	p.R578T	1.000	NULL	HMMPfam_Glyco_transf_22	-	no_errors
ALPK2	0	genome.wustl.edu	37	18	56247679	56247679	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	18	56247679	56247679	T	G	SNP	ALPK2	NM_052947.3	human	genbank	58_37c	-1	validated	missense	c.329	p.N110T	0.071	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
AMDHD1	0	genome.wustl.edu	37	12	96359545	96359548	+	Frame_Shift_Del	DEL	TTGC	TTGC	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	TTGC	TTGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	96359545	96359548	TTGC	-	DEL	AMDHD1	NM_152435.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.1020_1023	p.C341fs	1.000:1.000:1.000:0.998	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases	-	no_errors
ARNTL2	0	genome.wustl.edu	37	12	27521193	27521193	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	27521193	27521193	A	C	SNP	ARNTL2	NM_020183.3	human	genbank	58_37c	+1	provisional	splice_site	c.32-2	e2-2	0.084	-	-	-	no_errors
ATP13A4	0	genome.wustl.edu	37	3	193156267	193156267	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	193156267	193156267	A	C	SNP	ATP13A4	NM_032279.2	human	genbank	58_37c	-1	validated	missense	c.2669	p.I890S	1.000	superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
AVPI1	0	genome.wustl.edu	37	10	99437633	99437633	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	10	99437633	99437633	C	G	SNP	AVPI1	NM_021732.2	human	genbank	58_37c	-1	validated	missense	c.437	p.R146T	1.000	NULL	NULL	-	no_errors
BBS9	0	genome.wustl.edu	37	7	33573686	33573686	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	33573686	33573686	C	G	SNP	BBS9	NM_198428.2	human	genbank	58_37c	+1	reviewed	missense	c.2419	p.Q807E	0.146	NULL	NULL	-	no_errors
C11orf63	0	genome.wustl.edu	37	11	122774895	122774895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	122774895	122774895	G	A	SNP	C11orf63	NM_024806.2	human	genbank	58_37c	+1	validated	missense	c.607	p.G203S	0.000	NULL	NULL	-	no_errors
C1orf84	0	genome.wustl.edu	37	1	43868911	43868911	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	43868911	43868911	C	T	SNP	C1orf84	NM_001012961.1	human	genbank	58_37c	+1	validated	missense	c.91	p.R31C	1.000	NULL	NULL	-	no_errors
C6orf123	0	genome.wustl.edu	37	6	168191674	168191674	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	168191674	168191674	G	C	SNP	C6orf123	ENST00000366822	human	ensembl	58_37c	-1	known	missense	c.83	p.P28R	0.001	NULL	NULL	-	no_errors
C6orf192	0	genome.wustl.edu	37	6	133100532	133100532	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	133100532	133100532	C	G	SNP	C6orf192	NM_052831.2	human	genbank	58_37c	-1	validated	missense	c.670	p.G224R	0.002	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
CACNA1F	0	genome.wustl.edu	37	X	49063555	49063555	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	49063555	49063555	G	C	SNP	CACNA1F	NM_005183.2	human	genbank	58_37c	-1	reviewed	silent	c.5175	p.L1725	0.951	NULL	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CARS2	0	genome.wustl.edu	37	13	111293891	111293893	+	In_Frame_Del	DEL	GCT	GCT	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	GCT	GCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	13	111293891	111293893	GCT	-	DEL	CARS2	NM_024537.2	human	genbank	58_37c	-1	validated	in_frame_del	c.1688_1686	p.A563in_frame_del	0.000:0.000:0.000	NULL	PatternScan_AA_TRNA_LIGASE_I,superfamily_tRNAsyn_1a_bind,HMMPfam_tRNA-synt_1e,superfamily_SSF52374	-	no_errors
CCDC125	0	genome.wustl.edu	37	5	68595848	68595848	+	Silent	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	68595848	68595848	T	G	SNP	CCDC125	NM_176816.3	human	genbank	58_37c	-1	validated	silent	c.807	p.S269	1.000	NULL	NULL	-	no_errors
CD84	0	genome.wustl.edu	37	1	160523827	160523827	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	160523827	160523827	G	T	SNP	CD84	NM_003874.3	human	genbank	58_37c	-1	validated	nonsense	c.498	p.Y166*	0.014	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_errors
CDH8	0	genome.wustl.edu	37	16	61689466	61689466	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	16	61689466	61689466	A	T	SNP	CDH8	NM_001796.2	human	genbank	58_37c	-1	reviewed	missense	c.1814	p.V605D	1.000	superfamily_Cadherin	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CILP2	0	genome.wustl.edu	37	19	19655187	19655188	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	19655187	19655188	-	G	INS	CILP2	NM_153221.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1833_1834	p.P611fs	1.000:1.000	NULL	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMSmart_IGc2,superfamily_CarboxypepD_reg,HMMPfam_I-set,superfamily_SSF48726	-	no_errors
CKAP4	0	genome.wustl.edu	37	12	106633464	106633464	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	106633464	106633464	C	G	SNP	CKAP4	NM_006825.3	human	genbank	58_37c	-1	validated	missense	c.1147	p.D383H	0.001	NULL	NULL	-	no_errors
COLQ	0	genome.wustl.edu	37	3	15515753	15515753	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	15515753	15515753	C	G	SNP	COLQ	NM_005677.3	human	genbank	58_37c	-1	reviewed	silent	c.582	p.L194	0.985	HMMPfam_Collagen	HMMPfam_Collagen	-	no_errors
CPD	0	genome.wustl.edu	37	17	28766018	28766018	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	17	28766018	28766018	G	C	SNP	CPD	NM_001304.3	human	genbank	58_37c	+1	reviewed	missense	c.2153	p.R718T	1.000	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,superfamily_SSF53187	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,superfamily_CarboxypepD_reg,superfamily_SSF53187	-	no_errors
CROCCL1	0	genome.wustl.edu	37	1	16945452	16945452	+	RNA	SNP	C	C	T	rs11260834	byFrequency	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	16945452	16945452	C	T	SNP	CROCCL1	NR_026752.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
CST7	0	genome.wustl.edu	37	20	24937952	24937952	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	20	24937952	24937952	G	C	SNP	CST7	NM_003650.3	human	genbank	58_37c	+1	reviewed	missense	c.166	p.V56L	0.000	HMMSmart_SM00043	HMMPfam_Cystatin,HMMSmart_SM00043,superfamily_Cystatin/monellin	-	no_errors
DDX18	0	genome.wustl.edu	37	2	118582195	118582195	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	118582195	118582195	G	C	SNP	DDX18	NM_006773.3	human	genbank	58_37c	+1	reviewed	missense	c.1117	p.D373H	1.000	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
DMBT1	0	genome.wustl.edu	37	10	124353121	124353121	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	10	124353121	124353121	C	A	SNP	DMBT1	ENST00000398079	human	ensembl	58_37c	+1	known	missense	c.809	p.S270Y	0.000	NULL	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like	-	no_start_codon:no_stop_codon
DNAH11	0	genome.wustl.edu	37	7	21639618	21639618	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	21639618	21639618	C	G	SNP	DNAH11	NM_003777.3	human	genbank	58_37c	+1	reviewed	missense	c.2881	p.L961V	0.575	NULL	PatternScan_THIOL_PROTEASE_HIS,HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOPEY1	0	genome.wustl.edu	37	6	83841993	83841993	+	Silent	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	83841993	83841993	T	G	SNP	DOPEY1	NM_015018.2	human	genbank	58_37c	+1	validated	silent	c.2715	p.P905	1.000	NULL	HMMPfam_Dopey_N	-	no_errors
DSCAM	0	genome.wustl.edu	37	21	41459120	41459120	+	Silent	SNP	A	A	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	21	41459120	41459120	A	C	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	silent	c.3945	p.P1315	0.997	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DUSP27	0	genome.wustl.edu	37	1	167095074	167095074	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	167095074	167095074	G	C	SNP	DUSP27	NM_001080426.1	human	genbank	58_37c	+1	provisional	missense	c.706	p.V236L	1.000	HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
DYNC1H1	0	genome.wustl.edu	37	14	102496209	102496209	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	14	102496209	102496209	G	T	SNP	DYNC1H1	NM_001376.4	human	genbank	58_37c	+1	reviewed	missense	c.9696	p.K3232N	1.000	NULL	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_SSF52540	-	no_errors
DYNC2H1	0	genome.wustl.edu	37	11	103106473	103106473	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	103106473	103106473	C	A	SNP	DYNC2H1	NM_001080463.1	human	genbank	58_37c	+1	reviewed	missense	c.9640	p.L3214I	1.000	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
EI24	0	genome.wustl.edu	37	11	125447449	125447449	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	125447449	125447449	T	C	SNP	EI24	ENST00000343678	human	ensembl	58_37c	+1	known	missense	c.299	p.V100A	1.000	HMMPfam_EI24	HMMPfam_EI24	-	no_errors
EIF3E	0	genome.wustl.edu	37	8	109228677	109228677	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	109228677	109228677	A	G	SNP	EIF3E	NM_001568.2	human	genbank	58_37c	-1	validated	silent	c.915	p.F305	1.000	HMMPfam_PCI	"HMMPfam_PCI,HMMSmart_SM00088,HMMPfam_eIF3_N,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
EMR4P	0	genome.wustl.edu	37	19	6981164	6981164	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	6981164	6981164	T	A	SNP	EMR4P	ENST00000359590	human	ensembl	58_37c	-1	known	missense	c.468	p.Q156H	0.000	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_7tm_2,HMMSmart_SM00179,HMMPfam_EGF_CA,PatternScan_G_PROTEIN_RECEP_F2_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
ENSG00000182315	0	genome.wustl.edu	37	19	7056372	7056372	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	7056372	7056372	G	C	SNP	ENSG00000182315	ENST00000333843	human	ensembl	58_37c	-1	known	missense	c.588	p.D196E	0.473	NULL	NULL	-	no_errors
ENSG00000214391	0	genome.wustl.edu	37	11	90016253	90016253	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	90016253	90016253	G	T	SNP	ENSG00000214391	ENST00000318973	human	ensembl	58_37c	+1	known	missense	c.428	p.G143V	1.000	HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin_FtsZ	HMMPfam_Tubulin,superfamily_Tub_FtsZ_C,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin_FtsZ	-	no_stop_codon
EP400NL	0	genome.wustl.edu	37	12	132589046	132589046	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	132589046	132589046	G	C	SNP	EP400NL	ENST00000376625	human	ensembl	58_37c	+1	known	missense	c.481	p.D161H	1.000	NULL	NULL	-	no_errors
EPX	0	genome.wustl.edu	37	17	56276953	56276953	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	17	56276953	56276953	G	C	SNP	EPX	NM_000502.4	human	genbank	58_37c	+1	reviewed	missense	c.1335	p.R445S	0.001	HMMPfam_An_peroxidase,superfamily_Peroxidase_super	HMMPfam_An_peroxidase,superfamily_Peroxidase_super,PatternScan_PEROXIDASE_1,PatternScan_PEROXIDASE_2	-	no_errors
ETV1	0	genome.wustl.edu	37	7	13949273	13949273	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	13949273	13949273	G	T	SNP	ETV1	NM_004956.4	human	genbank	58_37c	-1	validated	silent	c.924	p.V308	0.983	HMMPfam_ETS_PEA3_N	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2,HMMPfam_ETS_PEA3_N,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
FAM49B	0	genome.wustl.edu	37	8	130867881	130867881	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	130867881	130867881	G	A	SNP	FAM49B	NM_016623.3	human	genbank	58_37c	-1	predicted	silent	c.414	p.F138	1.000	HMMPfam_DUF1394	HMMPfam_DUF1394	-	no_errors
FANCD2	0	genome.wustl.edu	37	3	10128882	10128882	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	10128882	10128882	C	G	SNP	FANCD2	NM_033084.3	human	genbank	58_37c	+1	reviewed	missense	c.3400	p.L1134V	1.000	NULL	NULL	-	no_errors
FGD2	0	genome.wustl.edu	37	6	36995284	36995285	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	36995284	36995285	-	C	INS	FGD2	NM_173558.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1685_1686	p.R564fs	0.734:0.736	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,superfamily_PH domain-like	-	no_errors
FOXRED1	0	genome.wustl.edu	37	11	126147394	126147394	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	126147394	126147394	C	G	SNP	FOXRED1	NM_017547.2	human	genbank	58_37c	+1	provisional	missense	c.1271	p.P424R	0.977	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain	-	no_errors
FREM1	0	genome.wustl.edu	37	9	14859447	14859447	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	9	14859447	14859447	A	G	SNP	FREM1	NM_144966.5	human	genbank	58_37c	-1	reviewed	missense	c.365	p.I122T	0.682	NULL	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_Cadherin-like,superfamily_C-type lectin-like,PatternScan_SPASE_I_1	-	no_errors
GBP4	0	genome.wustl.edu	37	1	89656943	89656943	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	89656943	89656943	C	T	SNP	GBP4	NM_052941.4	human	genbank	58_37c	-1	validated	splice_site	c.916+1	e6+1	0.840	-	-	-	no_errors
GGA1	0	genome.wustl.edu	37	22	38016265	38016265	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	22	38016265	38016265	G	A	SNP	GGA1	NM_013365.4	human	genbank	58_37c	+1	reviewed	silent	c.324	p.S108	0.224	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_VHS,HMMPfam_GAT,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_ENTH/VHS domain,superfamily_Clathrin adaptor appendage domain,HMMSmart_SM00288,superfamily_GAT-like domain	-	no_errors
GPATCH3	0	genome.wustl.edu	37	1	27226625	27226625	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	27226625	27226625	G	C	SNP	GPATCH3	NM_022078.2	human	genbank	58_37c	-1	validated	missense	c.309	p.C103W	1.000	NULL	HMMPfam_G-patch,HMMSmart_G_patch	-	no_errors
GPR111	0	genome.wustl.edu	37	6	47646792	47646792	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	47646792	47646792	G	A	SNP	GPR111	NM_153839.6	human	genbank	58_37c	+1	validated	missense	c.189	p.M63I	0.321	NULL	HMMPfam_GPS,HMMPfam_7tm_2	-	no_errors
GRAMD3	0	genome.wustl.edu	37	5	125759303	125759303	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	125759303	125759303	C	G	SNP	GRAMD3	NM_023927.2	human	genbank	58_37c	+1	validated	missense	c.5	p.T2S	0.990	NULL	HMMPfam_GRAM,HMMSmart_GRAM	-	no_errors
HDX	0	genome.wustl.edu	37	X	83724316	83724316	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	83724316	83724316	G	C	SNP	HDX	NM_144657.4	human	genbank	58_37c	-1	validated	missense	c.415	p.Q139E	0.997	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	no_errors
HEXA	0	genome.wustl.edu	37	15	72641433	72641433	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	72641433	72641433	C	T	SNP	HEXA	NM_000520.4	human	genbank	58_37c	-1	reviewed	missense	c.973	p.D325N	0.999	HMMPfam_Glyco_hydro_20,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_20b,HMMPfam_Glyco_hydro_20,superfamily_(Trans)glycosidases,superfamily_beta-N-acetylhexosaminidase-like domain	-	no_errors
HRG	0	genome.wustl.edu	37	3	186389561	186389561	+	Missense_Mutation	SNP	G	G	C	rs138389406	byFrequency	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	186389561	186389561	G	C	SNP	HRG	NM_000412.2	human	genbank	58_37c	+1	reviewed	missense	c.541	p.E181Q	0.916	HMMSmart_SM00043,superfamily_Cystatin/monellin	HMMPfam_Cystatin,HMMSmart_SM00043,superfamily_Cystatin/monellin	-	no_errors
IFNG	0	genome.wustl.edu	37	12	68549246	68549246	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	68549246	68549246	G	A	SNP	IFNG	NM_000619.2	human	genbank	58_37c	-1	reviewed	missense	c.388	p.R130C	0.999	HMMPfam_IFN-gamma,superfamily_4-helical cytokines	HMMPfam_IFN-gamma,superfamily_4-helical cytokines	-	no_errors
IGHV3-7	0	genome.wustl.edu	37	14	106518415	106518415	+	Silent	SNP	C	C	A	rs188349361	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	14	106518415	106518415	C	A	SNP	IGHV3-7	ENST00000390598	human	ensembl	58_37c	-1	known	silent	c.336	p.V112	0.756	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
IKBIP	0	genome.wustl.edu	37	12	99007970	99007970	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	99007970	99007970	G	A	SNP	IKBIP	NM_201612.1	human	genbank	58_37c	-1	provisional	missense	c.446	p.T149M	0.001	NULL	NULL	-	no_errors
INTS6	0	genome.wustl.edu	37	13	51948545	51948545	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	13	51948545	51948545	C	G	SNP	INTS6	NM_012141.2	human	genbank	58_37c	-1	reviewed	missense	c.1903	p.V635L	1.000	PatternScan_DEAD_ATP_HELICASE	PatternScan_DEAD_ATP_HELICASE,superfamily_vWA-like	-	no_errors
ITIH5	0	genome.wustl.edu	37	10	7658059	7658059	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	10	7658059	7658059	A	T	SNP	ITIH5	ENST00000461751	human	ensembl	58_37c	-1	known	missense	c.157	p.S53T	0.989	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ITLN2	0	genome.wustl.edu	37	1	160922453	160922453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	160922453	160922453	A	G	SNP	ITLN2	NM_080878.2	human	genbank	58_37c	-1	validated	silent	c.150	p.P50	0.028	superfamily_Fibrinogen C-terminal domain-like	superfamily_Fibrinogen C-terminal domain-like	-	no_errors
KDELR2	0	genome.wustl.edu	37	7	6509386	6509386	+	Splice_Site	SNP	C	C	G	rs56210712	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	6509386	6509386	C	G	SNP	KDELR2	NM_006854.3	human	genbank	58_37c	-1	reviewed	splice_site	c.193-1	e3-1	1.000	-	-	-	no_errors
KIAA1009	0	genome.wustl.edu	37	6	84862461	84862461	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	84862461	84862461	T	G	SNP	KIAA1009	NM_014895.2	human	genbank	58_37c	-1	validated	missense	c.3432	p.K1144N	1.000	NULL	NULL	-	no_errors
KLHDC3	0	genome.wustl.edu	37	6	42986864	42986864	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	42986864	42986864	G	C	SNP	KLHDC3	NM_057161.2	human	genbank	58_37c	+1	reviewed	missense	c.964	p.D322H	1.000	NULL	HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_2	-	no_errors
KLK13	0	genome.wustl.edu	37	19	51561881	51561881	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	51561881	51561881	C	T	SNP	KLK13	NM_015596.1	human	genbank	58_37c	-1	reviewed	missense	c.559	p.E187K	0.995	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
KTELC1	0	genome.wustl.edu	37	3	119209519	119209519	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	119209519	119209519	C	G	SNP	KTELC1	NM_152305.2	human	genbank	58_37c	+1	validated	missense	c.919	p.P307A	1.000	HMMSmart_SM00672,HMMPfam_DUF821	HMMSmart_SM00672,HMMPfam_DUF821	-	no_errors
LAMA5	0	genome.wustl.edu	37	20	60909006	60909006	+	Silent	SNP	G	G	A	rs151209097	byFrequency	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	20	60909006	60909006	G	A	SNP	LAMA5	NM_005560.3	human	genbank	58_37c	-1	reviewed	silent	c.2829	p.S943	0.032	NULL	HMMPfam_Laminin_B,PatternScan_TNFR_NGFR_1,HMMSmart_SM00282,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00281,superfamily_EGF/Laminin	-	no_errors
LOC100132738	0	genome.wustl.edu	37	2	3184864	3184864	+	Missense_Mutation	SNP	C	C	A	rs74198733	byFrequency	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	3184864	3184864	C	A	SNP	LOC100132738	XM_001714359.2	human	genbank	58_37c	+1	model	missense	c.1538	p.T513K	0.057	NULL	NULL	-	no_errors
LOC100287222	0	genome.wustl.edu	37	7	150773264	150773264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	150773264	150773264	G	A	SNP	LOC100287222	XM_002342798.1	human	genbank	58_37c	-1	model	missense	c.181	p.L61F	1.000	NULL	NULL	-	no_errors
LOC729535	0	genome.wustl.edu	37	13	19271397	19271397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	13	19271397	19271397	C	T	SNP	LOC729535	XM_001130539.3	human	genbank	58_37c	+1	model	missense	c.289	p.P97S	0.335	NULL	NULL	-	no_errors
LRRC18	0	genome.wustl.edu	37	10	50122049	50122049	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	10	50122049	50122049	T	A	SNP	LRRC18	NM_001006939.3	human	genbank	58_37c	-1	validated	missense	c.152	p.D51V	1.000	HMMSmart_SM00369,superfamily_Outer arm dynein light chain 1	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_Outer arm dynein light chain 1	-	no_errors
LYST	0	genome.wustl.edu	37	1	235907399	235907399	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	235907399	235907399	C	G	SNP	LYST	NM_000081.2	human	genbank	58_37c	-1	reviewed	missense	c.8031	p.K2677N	0.926	NULL	HMMPfam_Beach,superfamily_BEACH domain,PatternScan_COPPER_BLUE,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
LZTS1	0	genome.wustl.edu	37	8	20110933	20110933	+	Missense_Mutation	SNP	G	G	A	rs147520951	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	20110933	20110933	G	A	SNP	LZTS1	NM_021020.2	human	genbank	58_37c	-1	reviewed	missense	c.509	p.A170V	0.638	NULL	HMMPfam_Fez1	-	no_errors
MAGEA12	0	genome.wustl.edu	37	X	151900530	151900530	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	151900530	151900530	C	G	SNP	MAGEA12	NM_005367.5	human	genbank	58_37c	-1	reviewed	missense	c.271	p.E91Q	0.016	NULL	HMMPfam_MAGE	-	no_errors
MAP1A	0	genome.wustl.edu	37	15	43813754	43813766	+	Frame_Shift_Del	DEL	CCTCAGGGGGCTT	CCTCAGGGGGCTT	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	CCTCAGGGGGCTT	CCTCAGGGGGCTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	43813754	43813766	CCTCAGGGGGCTT	-	DEL	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.83_95	p.G30fs	1.000:0.999:1.000:1.000:0.984:1.000:1.000:0.982:1.000:1.000:1.000:1.000:1.000	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAST4	0	genome.wustl.edu	37	5	66432390	66432390	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	66432390	66432390	G	A	SNP	MAST4	NM_015183.2	human	genbank	58_37c	+1	validated	splice_site	c.1826-1	e18-1	1.000	-	-	-	no_errors
MEA1	0	genome.wustl.edu	37	6	42980860	42980860	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	42980860	42980860	C	G	SNP	MEA1	NM_014623.2	human	genbank	58_37c	-1	validated	missense	c.296	p.R99P	0.997	HMMPfam_MEA1	HMMPfam_MEA1	-	no_errors
MLL5	0	genome.wustl.edu	37	7	104752795	104752795	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	104752795	104752795	A	G	SNP	MLL5	NM_018682.3	human	genbank	58_37c	+1	reviewed	missense	c.4592	p.Y1531C	0.990	NULL	HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100643155	100643155	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	100643155	100643155	A	T	SNP	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	missense	c.9740	p.K3247I	0.000	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100656338	100656345	+	Frame_Shift_Del	DEL	GTGAACAA	GTGAACAA	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	GTGAACAA	GTGAACAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	100656338	100656345	GTGAACAA	-	DEL	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	frame_shift_del	c.15982_15989	p.N5329fs	0.998:1.000:0.999:0.998:0.993:0.996:0.996:0.988	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
MYH11	0	genome.wustl.edu	37	16	15797866	15797866	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	16	15797866	15797866	T	C	SNP	MYH11	ENST00000396320	human	ensembl	58_37c	-1	known	missense	c.5960	p.E1987G	1.000	NULL	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYO18B	0	genome.wustl.edu	37	22	26272182	26272182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	22	26272182	26272182	C	G	SNP	MYO18B	NM_032608.5	human	genbank	58_37c	+1	reviewed	missense	c.4107	p.I1369M	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYOM2	0	genome.wustl.edu	37	8	2041867	2041867	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	2041867	2041867	A	T	SNP	MYOM2	NM_003970.2	human	genbank	58_37c	+1	validated	missense	c.2074	p.M692L	0.000	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
NFAT5	0	genome.wustl.edu	37	16	69681063	69681063	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	16	69681063	69681063	C	T	SNP	NFAT5	NM_138713.2	human	genbank	58_37c	+1	reviewed	missense	c.386	p.A129V	1.000	NULL	HMMPfam_TIG,HMMSmart_SM00429,superfamily_p53-like transcription factors,HMMPfam_RHD,superfamily_E set domains	-	no_errors
NFKB1	0	genome.wustl.edu	37	4	103459076	103459076	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	4	103459076	103459076	C	G	SNP	NFKB1	NM_003998.3	human	genbank	58_37c	+1	reviewed	missense	c.221	p.S74C	1.000	superfamily_ANK,superfamily_P53_like_DNA_bnd,HMMPfam_RHD	PatternScan_REL_1,HMMPfam_Death,HMMSmart_DEATH,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,HMMPfam_TIG,HMMSmart_IPT,superfamily_P53_like_DNA_bnd,superfamily_DEATH_like,HMMPfam_RHD,superfamily_Ig_E-set	-	no_errors
NIF3L1	0	genome.wustl.edu	37	2	201764124	201764124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	201764124	201764124	C	T	SNP	NIF3L1	NM_001142356.1	human	genbank	58_37c	+1	validated	missense	c.743	p.S248L	0.001	HMMPfam_NIF3	HMMPfam_NIF3,superfamily_interacting_NIF3	-	no_errors
NR2F1	0	genome.wustl.edu	37	5	92923685	92923685	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	92923685	92923685	G	A	SNP	NR2F1	NM_005654.4	human	genbank	58_37c	+1	provisional	missense	c.526	p.G176R	1.000	superfamily_Str_ncl_receptor,HMMPfam_zf-C4_C	HMMPfam_Hormone_recep,HMMSmart_HOLI,HMMPfam_zf-C4,HMMSmart_ZnF_C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMPfam_zf-C4_C,superfamily_SSF57716	-	no_errors
NSUN5	0	genome.wustl.edu	37	7	72718027	72718027	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	72718027	72718027	G	C	SNP	NSUN5	NM_148956.2	human	genbank	58_37c	-1	reviewed	missense	c.941	p.P314R	0.000	superfamily_SSF53335	HMMPfam_Nol1_Nop2_Fmu,superfamily_SSF53335	-	no_errors
OR10G4	0	genome.wustl.edu	37	11	123886801	123886801	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	123886801	123886801	C	T	SNP	OR10G4	NM_001004462.1	human	genbank	58_37c	+1	provisional	nonsense	c.520	p.Q174*	0.003	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR2L8	0	genome.wustl.edu	37	1	248113016	248113016	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	248113016	248113016	C	A	SNP	OR2L8	NM_001001963.1	human	genbank	58_37c	+1	provisional	missense	c.857	p.P286H	0.998	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR2M1P	0	genome.wustl.edu	37	1	248285650	248285650	+	RNA	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	248285650	248285650	A	T	SNP	OR2M1P	NR_002141.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.000	-	-	-	pseudogene
OR5K1	0	genome.wustl.edu	37	3	98189042	98189042	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	98189042	98189042	G	C	SNP	OR5K1	NM_001004736.2	human	genbank	58_37c	+1	provisional	missense	c.622	p.V208L	0.890	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAAF1	0	genome.wustl.edu	37	11	73627677	73627680	+	Frame_Shift_Del	DEL	ATTT	ATTT	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	ATTT	ATTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	73627677	73627680	ATTT	-	DEL	PAAF1	NM_025155.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.907_910	p.Y304fs	1.000:1.000:1.000:1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
PACSIN2	0	genome.wustl.edu	37	22	43275089	43275089	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	22	43275089	43275089	C	G	SNP	PACSIN2	NM_007229.3	human	genbank	58_37c	-1	reviewed	missense	c.993	p.Q331H	1.000	NULL	HMMPfam_FCH,HMMSmart_SM00055,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
PCDH10	0	genome.wustl.edu	37	4	134073838	134073838	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	4	134073838	134073838	C	G	SNP	PCDH10	NM_032961.1	human	genbank	58_37c	+1	reviewed	missense	c.2543	p.T848S	1.000	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,PatternScan_EGF_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHAC2	0	genome.wustl.edu	37	5	140348549	140348556	+	Frame_Shift_Del	DEL	GCTACACT	GCTACACT	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	GCTACACT	GCTACACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	140348549	140348556	GCTACACT	-	DEL	PCDHAC2	NM_018899.5	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.2198_2205	p.Y734fs	0.169:0.360:0.993:1.000:1.000:1.000:1.000:0.997	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCMT1	0	genome.wustl.edu	37	6	150070927	150070927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	150070927	150070927	G	A	SNP	PCMT1	ENST00000367384	human	ensembl	58_37c	+1	known	missense	c.64	p.D22N	1.000	NULL	HMMPfam_PCMT,PatternScan_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
PCSK5	0	genome.wustl.edu	37	9	78799667	78799667	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	9	78799667	78799667	G	C	SNP	PCSK5	NM_006200.3	human	genbank	58_37c	+1	reviewed	missense	c.2276	p.G759A	1.000	HMMSmart_SM00261,superfamily_Growth factor receptor domain	HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Subtilisin-like,HMMPfam_P_proprotein,HMMSmart_SM00261,superfamily_Galactose-binding domain-like,superfamily_Protease propeptides/inhibitors,superfamily_Growth factor receptor domain,HMMPfam_PLAC	-	no_errors
PHKA1	0	genome.wustl.edu	37	X	71855080	71855080	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	71855080	71855080	G	A	SNP	PHKA1	NM_002637.3	human	genbank	58_37c	-1	reviewed	missense	c.1639	p.L547F	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
PLAT	0	genome.wustl.edu	37	8	42045512	42045512	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	42045512	42045512	G	T	SNP	PLAT	NM_000930.3	human	genbank	58_37c	-1	reviewed	missense	c.276	p.F92L	1.000	HMMPfam_EGF	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_fn1,HMMSmart_SM00058,PatternScan_FN1_1,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_EGF,superfamily_Trypsin-like serine proteases,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Kringle-like,PatternScan_KRINGLE_1,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_Fibronectin type I module	-	no_errors
PLCD3	0	genome.wustl.edu	37	17	43195728	43195728	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	17	43195728	43195728	A	T	SNP	PLCD3	ENST00000322765	human	ensembl	58_37c	-1	known	missense	c.1045	p.S349T	1.000	HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,PatternScan_EF_HAND_1,superfamily_EF-hand,superfamily_PH domain-like	-	no_errors
PLIN5	0	genome.wustl.edu	37	19	4534066	4534066	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	4534066	4534066	A	G	SNP	PLIN5	NM_001013706.2	human	genbank	58_37c	-1	validated	silent	c.21	p.A7	0.012	NULL	HMMPfam_Perilipin,superfamily_Mannose-6-phosphate receptor binding protein 1 (Tip47) C-terminal domain	-	no_errors
POP1	0	genome.wustl.edu	37	8	99158821	99158821	+	Silent	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	99158821	99158821	T	A	SNP	POP1	NM_015029.2	human	genbank	58_37c	+1	reviewed	silent	c.1620	p.L540	0.966	NULL	HMMPfam_POP1,HMMPfam_POPLD	-	no_errors
PRODH2	0	genome.wustl.edu	37	19	36297349	36297349	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	36297349	36297349	A	G	SNP	PRODH2	NM_021232.1	human	genbank	58_37c	-1	reviewed	silent	c.1212	p.Y404	0.462	HMMPfam_Pro_dh,superfamily_SSF51730	HMMPfam_Pro_dh,superfamily_SSF51730	-	no_errors
PSENEN	0	genome.wustl.edu	37	19	36237374	36237374	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	36237374	36237374	G	A	SNP	PSENEN	NM_172341.1	human	genbank	58_37c	+1	reviewed	missense	c.116	p.R39Q	0.996	HMMPfam_PEN-2	HMMPfam_PEN-2	-	no_errors
PTPN23	0	genome.wustl.edu	37	3	47452898	47452898	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	47452898	47452898	C	G	SNP	PTPN23	NM_015466.2	human	genbank	58_37c	+1	validated	missense	c.3610	p.H1204D	0.844	HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMPfam_BRO1,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RAB11FIP1	0	genome.wustl.edu	37	8	37730075	37730075	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	37730075	37730075	C	G	SNP	RAB11FIP1	NM_001002814.2	human	genbank	58_37c	-1	validated	missense	c.2245	p.D749H	0.000	NULL	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_RBD-FIP	-	no_errors
RAB36	0	genome.wustl.edu	37	22	23498330	23498331	+	In_Frame_Ins	INS	-	-	CTG	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	22	23498330	23498331	-	CTG	INS	RAB36	ENST00000420895	human	ensembl	58_37c	+1	known	in_frame_ins	c.386_387	p.QDPL129in_frame_insH*	0.000:0.000	HMMSmart_SM00175	HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
RANBP3L	0	genome.wustl.edu	37	5	36268305	36268305	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	36268305	36268305	A	T	SNP	RANBP3L	ENST00000502994	human	ensembl	58_37c	-1	known	missense	c.333	p.H111Q	0.348	NULL	HMMPfam_Ran_BP1,HMMSmart_SM00160,superfamily_PH domain-like	-	no_errors
RB1CC1	0	genome.wustl.edu	37	8	53586778	53586778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	53586778	53586778	C	T	SNP	RB1CC1	NM_014781.4	human	genbank	58_37c	-1	reviewed	missense	c.629	p.R210K	1.000	NULL	HMMPfam_ATG11,superfamily_SSF54236	-	no_errors
RBM12	0	genome.wustl.edu	37	20	34240553	34240553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	20	34240553	34240553	C	T	SNP	RBM12	NM_006047.4	human	genbank	58_37c	-1	reviewed	missense	c.2692	p.G898S	1.000	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RBM12	0	genome.wustl.edu	37	20	34240740	34240741	+	In_Frame_Ins	INS	-	-	GGGCCG	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	20	34240740	34240741	-	GGGCCG	INS	RBM12	NM_006047.4	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.2505_2504	p.838in_frame_insGP	0.947:0.997	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RBM5	0	genome.wustl.edu	37	3	50155888	50155889	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	50155888	50155889	GA	-	DEL	RBM5	NM_005778.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.2447_2448	p.*816fs	1.000:0.999	NULL	HMMPfam_G-patch,HMMSmart_SM00443,HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_RNA-binding domain RBD	-	no_errors
RGS7	0	genome.wustl.edu	37	1	240969478	240969478	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	240969478	240969478	C	T	SNP	RGS7	NM_002924.4	human	genbank	58_37c	-1	validated	missense	c.1231	p.V411M	1.000	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam	HMMPfam_RGS,HMMSmart_RGS,HMMPfam_DEP,HMMSmart_DEP,HMMPfam_G-gamma,HMMSmart_GGL,superfamily_G-protein_gamma-like,superfamily_Regulat_G_prot_signal_superfam,superfamily_SSF46785	-	no_errors
RIMS4	0	genome.wustl.edu	37	20	43386365	43386365	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	20	43386365	43386365	C	G	SNP	RIMS4	NM_182970.2	human	genbank	58_37c	-1	validated	missense	c.397	p.D133H	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
SACS	0	genome.wustl.edu	37	13	23912087	23912087	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	13	23912087	23912087	G	C	SNP	SACS	NM_014363.4	human	genbank	58_37c	-1	reviewed	silent	c.5928	p.T1976	0.149	NULL	HMMPfam_ubiquitin,superfamily_Chaperone J-domain,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HEPN,HMMSmart_SM00748,superfamily_Ubiquitin-like,superfamily_Nucleotidyltransferase substrate binding subunit/domain	-	no_errors
SCN11A	0	genome.wustl.edu	37	3	38951681	38951681	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	38951681	38951681	T	A	SNP	SCN11A	NM_014139.2	human	genbank	58_37c	-1	validated	missense	c.977	p.Y326F	0.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SERPINI2	0	genome.wustl.edu	37	3	167184946	167184946	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	167184946	167184946	A	G	SNP	SERPINI2	NM_006217.3	human	genbank	58_37c	-1	reviewed	silent	c.375	p.H125	1.000	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin	HMMPfam_Serpin,HMMSmart_SERPIN,PatternScan_SERPIN,superfamily_Prot_inh_serpin	-	no_errors
SF3B3	0	genome.wustl.edu	37	16	70595601	70595601	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	16	70595601	70595601	G	A	SNP	SF3B3	NM_012426.4	human	genbank	58_37c	+1	reviewed	silent	c.2202	p.L734	1.000	NULL	PatternScan_IG_MHC,HMMPfam_CPSF_A	-	no_errors
SLC12A1	0	genome.wustl.edu	37	15	48551430	48551430	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	48551430	48551430	G	A	SNP	SLC12A1	NM_000338.2	human	genbank	58_37c	+1	reviewed	missense	c.2076	p.M692I	1.000	NULL	HMMPfam_AA_permease,HMMPfam_AA_permease_N	-	no_errors
SLC22A10	0	genome.wustl.edu	37	11	63069806	63069806	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	63069806	63069806	C	G	SNP	SLC22A10	NM_001039752.3	human	genbank	58_37c	+1	validated	missense	c.1076	p.A359G	0.012	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SLC27A2	0	genome.wustl.edu	37	15	50515175	50515175	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	50515175	50515175	G	A	SNP	SLC27A2	NM_003645.3	human	genbank	58_37c	+1	reviewed	missense	c.986	p.R329H	0.988	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
SLC4A5	0	genome.wustl.edu	37	2	74466568	74466568	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	74466568	74466568	T	G	SNP	SLC4A5	NM_021196.3	human	genbank	58_37c	-1	reviewed	missense	c.2213	p.K738T	1.000	HMMPfam_HCO3_cotransp	HMMPfam_HCO3_cotransp,HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein	-	no_errors
SLC5A12	0	genome.wustl.edu	37	11	26702758	26702758	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	26702758	26702758	C	A	SNP	SLC5A12	NM_178498.3	human	genbank	58_37c	-1	validated	missense	c.1319	p.G440V	0.992	NULL	HMMPfam_SSF	-	no_errors
SLC7A14	0	genome.wustl.edu	37	3	170201192	170201192	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	170201192	170201192	C	T	SNP	SLC7A14	NM_020949.2	human	genbank	58_37c	-1	validated	silent	c.1026	p.S342	0.000	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
SLC9A6	0	genome.wustl.edu	37	X	135077034	135077034	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	135077034	135077034	C	A	SNP	SLC9A6	NM_001042537.1	human	genbank	58_37c	+1	reviewed	missense	c.415	p.P139T	1.000	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
SNX6	0	genome.wustl.edu	37	14	35032351	35032351	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	14	35032351	35032351	C	A	SNP	SNX6	NM_152233.2	human	genbank	58_37c	-1	reviewed	missense	c.1234	p.A412S	1.000	HMMPfam_Vps5	HMMPfam_PX,superfamily_PX domain,HMMPfam_Vps5	-	no_errors
SP110	0	genome.wustl.edu	37	2	231079807	231079807	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	231079807	231079807	C	T	SNP	SP110	NM_080424.2	human	genbank	58_37c	-1	reviewed	silent	c.174	p.L58	0.982	HMMPfam_Sp100	HMMPfam_SAND,HMMSmart_SM00258,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_Sp100,superfamily_SAND domain-like,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
SPHKAP	0	genome.wustl.edu	37	2	228846465	228846465	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	228846465	228846465	T	A	SNP	SPHKAP	NM_001142644.1	human	genbank	58_37c	-1	validated	missense	c.5071	p.S1691C	1.000	HMMPfam_AKAP_110	HMMPfam_AKAP_110	-	no_errors
SPINK5	0	genome.wustl.edu	37	5	147469120	147469120	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	5	147469120	147469120	G	C	SNP	SPINK5	NM_001127698.1	human	genbank	58_37c	+1	reviewed	missense	c.538	p.D180H	1.000	HMMSmart_SM00280,HMMPfam_Kazal_2,superfamily_Kazal-type serine protease inhibitors	HMMPfam_Kazal_1,HMMSmart_SM00280,PatternScan_KAZAL,HMMPfam_Kazal_2,superfamily_Kazal-type serine protease inhibitors	-	no_errors
STARD9	0	genome.wustl.edu	37	15	42982040	42982045	+	In_Frame_Del	DEL	TGACTC	TGACTC	-	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	TGACTC	TGACTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	42982040	42982045	TGACTC	-	DEL	STARD9	XM_001129482.3	human	genbank	58_37c	+1	model	in_frame_del	c.8006_8011	p.TL2670in_frame_del	0.000:0.000:0.002:0.013:0.025:0.022	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Bet v1-like	-	no_errors
STXBP2	0	genome.wustl.edu	37	19	7707892	7707892	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	7707892	7707892	G	C	SNP	STXBP2	NM_006949.2	human	genbank	58_37c	+1	reviewed	missense	c.984	p.Q328H	1.000	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins	-	no_errors
TAL1	0	genome.wustl.edu	37	1	47685653	47685653	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	47685653	47685653	G	C	SNP	TAL1	NM_003189.2	human	genbank	58_37c	-1	validated	missense	c.735	p.D245E	1.000	HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
TERF2	0	genome.wustl.edu	37	16	69401045	69401045	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	16	69401045	69401045	C	G	SNP	TERF2	NM_005652.2	human	genbank	58_37c	-1	reviewed	missense	c.879	p.K293N	1.000	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_TRF,superfamily_Telomeric repeat binding factor (TRF) dimerisation domain,HMMPfam_Myb_DNA-binding	-	no_errors
TIMM8A	0	genome.wustl.edu	37	X	100601591	100601591	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	X	100601591	100601591	C	T	SNP	TIMM8A	NM_004085.3	human	genbank	58_37c	-1	reviewed	missense	c.190	p.V64M	1.000	HMMPfam_zf-Tim10_DDP	HMMPfam_zf-Tim10_DDP	-	no_errors
TLN1	0	genome.wustl.edu	37	9	35707382	35707382	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	9	35707382	35707382	G	A	SNP	TLN1	NM_006289.3	human	genbank	58_37c	-1	reviewed	missense	c.4736	p.P1579L	1.000	NULL	HMMPfam_I_LWEQ,HMMSmart_ILWEQ,HMMPfam_VBS,HMMPfam_Talin_middle,superfamily_Talin_cent,HMMPfam_FERM_N,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF109885,superfamily_SSF50729,superfamily_SSF54236	-	no_errors
TMEM63C	0	genome.wustl.edu	37	14	77697973	77697973	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	14	77697973	77697973	C	G	SNP	TMEM63C	NM_020431.2	human	genbank	58_37c	+1	validated	missense	c.393	p.I131M	1.000	NULL	HMMPfam_DUF221	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578535	7578535	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	17	7578535	7578535	T	G	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.395	p.K132T	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAFD1	0	genome.wustl.edu	37	12	112587555	112587555	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	112587555	112587555	G	T	SNP	TRAFD1	NM_001143906.1	human	genbank	58_37c	+1	validated	missense	c.1159	p.D387Y	1.000	NULL	HMMSmart_ZnF_C2H2	-	no_errors
TTBK1	0	genome.wustl.edu	37	6	43223320	43223320	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	43223320	43223320	C	A	SNP	TTBK1	NM_032538.1	human	genbank	58_37c	+1	validated	missense	c.673	p.L225I	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TTN	0	genome.wustl.edu	37	2	179477137	179477137	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	179477137	179477137	G	C	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	silent	c.42411	p.V14137	0.957	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TWSG1	0	genome.wustl.edu	37	18	9396385	9396385	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	18	9396385	9396385	G	C	SNP	TWSG1	NM_020648.5	human	genbank	58_37c	+1	validated	missense	c.331	p.D111H	1.000	HMMPfam_Tsg	HMMPfam_Tsg	-	no_errors
UBR5	0	genome.wustl.edu	37	8	103282400	103282400	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	8	103282400	103282400	C	A	SNP	UBR5	NM_015902.4	human	genbank	58_37c	-1	reviewed	missense	c.7097	p.R2366I	1.000	superfamily_HECT,superfamily_PABP_HYD	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_PABP,HMMSmart_PolyA,superfamily_PABP_HYD,HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1	-	no_errors
UCP2	0	genome.wustl.edu	37	11	73687912	73687912	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	73687912	73687912	T	A	SNP	UCP2	NM_003355.2	human	genbank	58_37c	-1	reviewed	missense	c.488	p.Y163F	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
UGT1A5	0	genome.wustl.edu	37	2	234622270	234622270	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	2	234622270	234622270	C	A	SNP	UGT1A5	NM_019078.1	human	genbank	58_37c	+1	reviewed	silent	c.633	p.V211	0.978	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
ULK4	0	genome.wustl.edu	37	3	41757046	41757046	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	41757046	41757046	A	C	SNP	ULK4	NM_017886.2	human	genbank	58_37c	-1	validated	missense	c.2470	p.S824A	0.740	NULL	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
UNC13A	0	genome.wustl.edu	37	19	17785507	17785507	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	17785507	17785507	C	T	SNP	UNC13A	NM_001080421.2	human	genbank	58_37c	-1	validated	silent	c.375	p.A125	0.007	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD,superfamily_Cysteine-rich domain	-	no_errors
USP24	0	genome.wustl.edu	37	1	55555340	55555340	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	1	55555340	55555340	C	T	SNP	USP24	NM_015306.2	human	genbank	58_37c	-1	validated	missense	c.6148	p.V2050I	0.999	NULL	HMMPfam_UCH,PatternScan_SUGAR_TRANSPORT_1,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases,superfamily_Ubiquitin-like	-	no_errors
WDR52	0	genome.wustl.edu	37	3	113119482	113119482	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	3	113119482	113119482	G	T	SNP	WDR52	NM_018338.3	human	genbank	58_37c	-1	validated	missense	c.1384	p.P462T	1.000	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XRCC2	0	genome.wustl.edu	37	7	152346029	152346029	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	7	152346029	152346029	C	T	SNP	XRCC2	NM_005431.1	human	genbank	58_37c	-1	reviewed	missense	c.541	p.E181K	0.984	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
XRRA1	0	genome.wustl.edu	37	11	74574068	74574068	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	74574068	74574068	T	C	SNP	XRRA1	NM_182969.1	human	genbank	58_37c	-1	validated	splice_site	c.980-2	e9-2	1.000	-	-	-	no_errors
ZCCHC8	0	genome.wustl.edu	37	12	122958130	122958130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	122958130	122958130	C	T	SNP	ZCCHC8	NM_017612.2	human	genbank	58_37c	-1	validated	missense	c.2038	p.E680K	1.000	NULL	HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMPfam_PSP,HMMSmart_SM00581	-	no_errors
ZDHHC17	0	genome.wustl.edu	37	12	77191265	77191265	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	12	77191265	77191265	C	G	SNP	ZDHHC17	NM_015336.2	human	genbank	58_37c	+1	validated	missense	c.145	p.R49G	1.000	NULL	HMMPfam_zf-DHHC,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ZKSCAN4	0	genome.wustl.edu	37	6	28219418	28219418	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	6	28219418	28219418	C	A	SNP	ZKSCAN4	NM_019110.3	human	genbank	58_37c	-1	provisional	missense	c.341	p.R114L	0.995	HMMPfam_SCAN,HMMSmart_SCAN	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF180	0	genome.wustl.edu	37	19	44982147	44982147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	44982147	44982147	A	G	SNP	ZNF180	NM_013256.3	human	genbank	58_37c	-1	validated	missense	c.551	p.V184A	0.001	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF215	0	genome.wustl.edu	37	11	6977210	6977210	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	11	6977210	6977210	T	C	SNP	ZNF215	NM_013250.2	human	genbank	58_37c	+1	validated	silent	c.1002	p.C334	0.001	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF43	0	genome.wustl.edu	37	19	21990455	21990455	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	19	21990455	21990455	A	T	SNP	ZNF43	NM_003423.2	human	genbank	58_37c	-1	validated	missense	c.2384	p.V795E	0.595	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF609	0	genome.wustl.edu	37	15	64970559	64970559	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1LH-01A-11D-A14G-09	TCGA-E2-A1LH-11A-22D-A14G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	605f1d27-db45-449a-a68f-4888b8c786a1	4feb8572-68f1-403c-8d3c-198fbe6e9fa4	15	64970559	64970559	C	G	SNP	ZNF609	NM_015042.1	human	genbank	58_37c	+1	provisional	missense	c.3647	p.S1216C	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
