Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATG2A	0	genome.wustl.edu	37	11	64674264	64674264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	11	64674264	64674264	C	T	SNP	ATG2A	ENST00000418259	human	ensembl	58_37c	-1	known	missense	c.2260	p.G754S	0.802	NULL	PatternScan_ADH_ZINC,PatternScan_OX2_COVAL_FAD,HMMPfam_ATG_C	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ATG2A	0	genome.wustl.edu	37	11	64674996	64674996	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	11	64674996	64674996	C	G	SNP	ATG2A	NM_015104.2	human	genbank	58_37c	-1	validated	splice_site	c.2647+1	e18+1	1.000	-	-	-	no_errors
ATP10B	0	genome.wustl.edu	37	5	160034008	160034008	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	5	160034008	160034008	C	T	SNP	ATP10B	NM_025153.2	human	genbank	58_37c	-1	validated	missense	c.2924	p.G975E	0.664	superfamily_HAD-like	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
CAMK1G	0	genome.wustl.edu	37	1	209784824	209784824	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	1	209784824	209784824	C	G	SNP	CAMK1G	NM_020439.2	human	genbank	58_37c	+1	reviewed	missense	c.842	p.T281R	1.000	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CELF2	0	genome.wustl.edu	37	10	11330504	11330504	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	10	11330504	11330504	T	A	SNP	CELF2	NM_006561.3	human	genbank	58_37c	+1	reviewed	missense	c.965	p.L322H	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
CLEC10A	0	genome.wustl.edu	37	17	6980307	6980307	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	17	6980307	6980307	C	A	SNP	CLEC10A	NM_182906.2	human	genbank	58_37c	-1	reviewed	splice_site	c.185-1	e3-1	0.402	-	-	-	no_errors
DACT1	0	genome.wustl.edu	37	14	59112414	59112414	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	14	59112414	59112414	C	T	SNP	DACT1	NM_016651.5	human	genbank	58_37c	+1	validated	missense	c.1073	p.P358L	0.991	NULL	NULL	-	no_errors
DCHS2	0	genome.wustl.edu	37	4	155241643	155241643	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	4	155241643	155241643	G	C	SNP	DCHS2	NM_017639.3	human	genbank	58_37c	-1	validated	silent	c.3543	p.S1181	0.361	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
DUOXA2	0	genome.wustl.edu	37	15	45406842	45406842	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	15	45406842	45406842	G	A	SNP	DUOXA2	NM_207581.3	human	genbank	58_37c	+1	reviewed	silent	c.39	p.Q13	0.004	HMMPfam_DuoxA	HMMPfam_DuoxA	-	no_errors
EFCAB6	0	genome.wustl.edu	37	22	44079628	44079628	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	22	44079628	44079628	G	C	SNP	EFCAB6	NM_022785.2	human	genbank	58_37c	-1	validated	missense	c.1250	p.T417S	0.000	superfamily_EF-hand	HMMSmart_SM00054,HMMPfam_DUF1880,PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors
ENSG00000211459	0	genome.wustl.edu	37	MT	1227	1227	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	MT	1227	1227	G	A	SNP	ENSG00000211459	ENST00000389680	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000231520	0	genome.wustl.edu	37	10	42380463	42380463	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	10	42380463	42380463	C	G	SNP	ENSG00000231520	ENST00000413838	human	ensembl	58_37c	-1	known	missense	c.69	p.W23C	0.000	NULL	NULL	-	no_stop_codon
ENSG00000237578	0	genome.wustl.edu	37	6	167238204	167238207	+	Frame_Shift_Del	DEL	TGTG	TGTG	-	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	TGTG	TGTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	6	167238204	167238207	TGTG	-	DEL	ENSG00000237578	ENST00000417598	human	ensembl	58_37c	-1	known	frame_shift_del	c.143_140	p.T47fs	0.015:0.016:0.017:0.022	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
FAM171A2	0	genome.wustl.edu	37	17	42433630	42433630	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	17	42433630	42433630	G	C	SNP	FAM171A2	NM_198475.2	human	genbank	58_37c	-1	validated	missense	c.689	p.P230R	1.000	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAM182B	0	genome.wustl.edu	37	20	25754119	25754120	+	RNA	INS	-	-	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	20	25754119	25754120	-	T	INS	FAM182B	NR_026714.2	human	genbank	58_37c	-1	predicted	rna	NULL	NULL	0.998:0.997	-	-	-	no_errors
FERMT3	0	genome.wustl.edu	37	11	63979191	63979191	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	11	63979191	63979191	A	C	SNP	FERMT3	NM_178443.2	human	genbank	58_37c	+1	reviewed	missense	c.758	p.Y253S	1.000	superfamily_Second domain of FERM,HMMSmart_SM00295	HMMPfam_PH,HMMSmart_SM00233,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like	-	no_errors
IGHV1-2	0	genome.wustl.edu	37	14	106452815	106452815	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	14	106452815	106452815	C	T	SNP	IGHV1-2	ENST00000390594	human	ensembl	58_37c	-1	known	nonsense	c.207	p.W69*	0.000	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
KCNA5	0	genome.wustl.edu	37	12	5155008	5155008	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	12	5155008	5155008	G	C	SNP	KCNA5	NM_002234.2	human	genbank	58_37c	+1	reviewed	missense	c.1695	p.K565N	0.016	NULL	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KCNB1	0	genome.wustl.edu	37	20	48098719	48098719	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	20	48098719	48098719	C	T	SNP	KCNB1	NM_004975.2	human	genbank	58_37c	-1	reviewed	missense	c.299	p.R100H	1.000	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold	HMMSmart_BTB,HMMPfam_K_tetra,HMMPfam_Kv2channel,HMMPfam_Ion_trans,superfamily_BTB/POZ_fold,superfamily_SSF81324	-	no_errors
KIAA1468	0	genome.wustl.edu	37	18	59888293	59888293	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	18	59888293	59888293	G	T	SNP	KIAA1468	NM_020854.3	human	genbank	58_37c	+1	validated	missense	c.640	p.A214S	1.000	NULL	HMMPfam_HEAT,HMMSmart_SM00667,superfamily_ARM repeat	-	no_errors
KIF7	0	genome.wustl.edu	37	15	90173555	90173555	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	15	90173555	90173555	G	A	SNP	KIF7	NM_198525.2	human	genbank	58_37c	-1	validated	missense	c.3281	p.S1094L	1.000	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LOC100291580	0	genome.wustl.edu	37	7	132944	132944	+	RNA	SNP	C	T	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	7	132944	132944	C	T	SNP	LOC100291580	XR_079033.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.030	-	-	-	pseudogene
LOC728297	0	genome.wustl.edu	37	9	45362640	45362642	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	9	45362640	45362642	AGA	-	DEL	LOC728297	XM_001127111.2	human	genbank	58_37c	+1	model	in_frame_del	c.614_616	p.K206in_frame_del	1.000:1.000:1.000	HMMPfam_7tm_1	HMMPfam_7tm_1	-	no_errors
MSTN	0	genome.wustl.edu	37	2	190924879	190924879	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	2	190924879	190924879	G	A	SNP	MSTN	NM_005259.2	human	genbank	58_37c	-1	reviewed	missense	c.656	p.P219L	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,PatternScan_EF_HAND_1,superfamily_Cystine-knot cytokines	-	no_errors
NAP1L4	0	genome.wustl.edu	37	11	2975878	2975878	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	11	2975878	2975878	T	A	SNP	NAP1L4	NM_005969.3	human	genbank	58_37c	-1	reviewed	splice_site	c.916-2	e11-2	1.000	-	-	-	no_errors
NUP133	0	genome.wustl.edu	37	1	229633915	229633915	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	1	229633915	229633915	A	G	SNP	NUP133	NM_018230.2	human	genbank	58_37c	-1	reviewed	missense	c.787	p.F263L	0.156	HMMPfam_Nup133_N	HMMPfam_Nup133,HMMPfam_Nup133_N	-	no_errors
PCMTD1	0	genome.wustl.edu	37	8	52733164	52733164	+	Missense_Mutation	SNP	G	G	C	rs149898988	byFrequency	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	8	52733164	52733164	G	C	SNP	PCMTD1	NM_052937.2	human	genbank	58_37c	-1	validated	missense	c.821	p.P274R	1.000	NULL	HMMPfam_PCMT,PatternScan_PCMT,superfamily_SSF53335	-	no_errors
PTPRH	0	genome.wustl.edu	37	19	55708703	55708703	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	19	55708703	55708703	G	C	SNP	PTPRH	NM_002842.3	human	genbank	58_37c	-1	validated	missense	c.1772	p.P591R	0.274	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RALY	0	genome.wustl.edu	37	20	32664864	32664865	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	20	32664864	32664865	-	CAG	INS	RALY	NM_016732.1	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.689_690	p.231in_frame_insS	0.001:0.001	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
SLC16A4	0	genome.wustl.edu	37	1	110921957	110921957	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	1	110921957	110921957	G	C	SNP	SLC16A4	NM_004696.1	human	genbank	58_37c	-1	provisional	missense	c.548	p.A183G	0.541	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SNX10	0	genome.wustl.edu	37	7	26412143	26412143	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	7	26412143	26412143	A	G	SNP	SNX10	NM_013322.2	human	genbank	58_37c	+1	reviewed	missense	c.557	p.D186G	1.000	NULL	HMMPfam_PX,HMMSmart_PX,superfamily_PX	-	no_errors
STAP1	0	genome.wustl.edu	37	4	68424566	68424566	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	4	68424566	68424566	G	C	SNP	STAP1	NM_012108.2	human	genbank	58_37c	+1	reviewed	missense	c.39	p.R13S	0.959	NULL	HMMSmart_SM00252,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like,superfamily_SH2 domain	-	no_errors
STXBP2	0	genome.wustl.edu	37	19	7704826	7704827	+	Frame_Shift_Ins	INS	-	-	TG	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	19	7704826	7704827	-	TG	INS	STXBP2	ENST00000320400	human	ensembl	58_37c	+1	known	frame_shift_ins	c.28_29	p.H13fs	0.000:0.001	NULL	PatternScan_VWFC_1,HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins,PatternScan_ZINC_FINGER_C2H2_1	-	no_start_codon
SYT14	0	genome.wustl.edu	37	1	210273640	210273640	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	1	210273640	210273640	T	C	SNP	SYT14	NM_153262.2	human	genbank	58_37c	+1	validated	missense	c.998	p.V333A	0.992	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
TLE1	0	genome.wustl.edu	37	9	84202727	84202727	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	9	84202727	84202727	T	C	SNP	TLE1	NM_005077.3	human	genbank	58_37c	-1	provisional	missense	c.1846	p.T616A	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,HMMPfam_TLE_N,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TRPC5	0	genome.wustl.edu	37	X	111024400	111024400	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	X	111024400	111024400	T	A	SNP	TRPC5	NM_012471.2	human	genbank	58_37c	-1	reviewed	missense	c.2135	p.H712L	1.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2,PatternScan_RIBOSOMAL_S2_1	-	no_errors
UPF2	0	genome.wustl.edu	37	10	12077114	12077114	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	10	12077114	12077114	C	A	SNP	UPF2	NM_015542.2	human	genbank	58_37c	-1	reviewed	missense	c.309	p.K103N	1.000	NULL	HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_Upf2,superfamily_ARM repeat	-	no_errors
YPEL1	0	genome.wustl.edu	37	22	22064966	22064966	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	22	22064966	22064966	C	T	SNP	YPEL1	NM_013313.3	human	genbank	58_37c	-1	reviewed	missense	c.68	p.C23Y	1.000	HMMPfam_Yippee	HMMPfam_Yippee	-	no_errors
ZNF354C	0	genome.wustl.edu	37	5	178505799	178505799	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	5	178505799	178505799	T	G	SNP	ZNF354C	NM_014594.1	human	genbank	58_37c	+1	provisional	missense	c.366	p.I122M	0.000	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF366	0	genome.wustl.edu	37	5	71756905	71756905	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	5	71756905	71756905	C	T	SNP	ZNF366	NM_152625.1	human	genbank	58_37c	-1	provisional	missense	c.419	p.R140H	0.997	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF684	0	genome.wustl.edu	37	1	41012838	41012838	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E9-A1NE-01A-21D-A14K-09	TCGA-E9-A1NE-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	dbd34322-ac40-41f0-acc7-7bfd06afdf67	992642bc-6b17-456e-acf5-e2ec2a1f2a08	1	41012838	41012838	G	T	SNP	ZNF684	NM_152373.3	human	genbank	58_37c	+1	validated	missense	c.843	p.R281S	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
