Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA11P	0	genome.wustl.edu	37	4	420088	420088	+	RNA	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	420088	420088	G	A	SNP	ABCA11P	NR_002451.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	pseudogene
ABCF2	0	genome.wustl.edu	37	7	150915925	150915925	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	150915925	150915925	T	C	SNP	ABCF2	NM_005692.3	human	genbank	58_37c	-1	reviewed	missense	c.1052	p.K351R	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_AAA,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ACSM5	0	genome.wustl.edu	37	16	20448431	20448431	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	20448431	20448431	C	T	SNP	ACSM5	NM_017888.2	human	genbank	58_37c	+1	validated	nonsense	c.1366	p.R456*	0.981	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
ADAM8	0	genome.wustl.edu	37	10	135084508	135084508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	135084508	135084508	C	T	SNP	ADAM8	NM_001109.4	human	genbank	58_37c	-1	reviewed	missense	c.1441	p.G481S	1.000	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)	"HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMPfam_Pep_M12B_propep,HMMPfam_ADAM_CR,HMMSmart_SM00608,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_DISINTEGRIN_1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	pseudogene:no_stop_codon
ADD2	0	genome.wustl.edu	37	2	70905920	70905920	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	70905920	70905920	C	A	SNP	ADD2	NM_001617.3	human	genbank	58_37c	-1	reviewed	missense	c.1299	p.W433C	1.000	NULL	HMMPfam_Aldolase_II,superfamily_AraD-like aldolase/epimerase	-	no_errors
ADD2	0	genome.wustl.edu	37	2	70906014	70906014	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	70906014	70906014	G	A	SNP	ADD2	NM_001617.3	human	genbank	58_37c	-1	reviewed	missense	c.1205	p.A402V	1.000	NULL	HMMPfam_Aldolase_II,superfamily_AraD-like aldolase/epimerase	-	no_errors
AGMAT	0	genome.wustl.edu	37	1	15906613	15906613	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	15906613	15906613	G	A	SNP	AGMAT	NM_024758.3	human	genbank	58_37c	-1	validated	missense	c.500	p.P167L	1.000	HMMPfam_Arginase,PatternScan_ARGINASE_1,superfamily_SSF52768	HMMPfam_Arginase,PatternScan_ARGINASE_1,PatternScan_ARGINASE_2,PatternScan_ARGINASE_3,superfamily_SSF52768	-	no_errors
ALG10	0	genome.wustl.edu	37	12	34179103	34179103	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	34179103	34179103	A	G	SNP	ALG10	NM_032834.3	human	genbank	58_37c	+1	reviewed	silent	c.675	p.G225	0.997	HMMPfam_DIE2_ALG10	HMMPfam_DIE2_ALG10	-	no_errors
ALG14	0	genome.wustl.edu	37	1	95492695	95492695	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	95492695	95492695	T	G	SNP	ALG14	NM_144988.3	human	genbank	58_37c	-1	validated	missense	c.410	p.K137T	1.000	HMMPfam_Alg14,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_Alg14,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
AMY2B	0	genome.wustl.edu	37	1	104117917	104117917	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	104117917	104117917	A	G	SNP	AMY2B	NM_020978.3	human	genbank	58_37c	+1	reviewed	silent	c.951	p.Q317	1.000	HMMPfam_Alpha-amylase,HMMSmart_SM00642,superfamily_(Trans)glycosidases	HMMPfam_Alpha-amylase,HMMPfam_Alpha-amylase_C,HMMSmart_SM00632,HMMSmart_SM00642,superfamily_(Trans)glycosidases,superfamily_Glycosyl hydrolase domain	-	no_errors
ANPEP	0	genome.wustl.edu	37	15	90348325	90348325	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	90348325	90348325	G	A	SNP	ANPEP	NM_001150.2	human	genbank	58_37c	-1	reviewed	missense	c.881	p.A294V	0.000	HMMPfam_Peptidase_M1,superfamily_SSF55486	PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M1,superfamily_SSF55486,superfamily_SSF63737	-	no_errors
AP2B1	0	genome.wustl.edu	37	17	33953640	33953640	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	33953640	33953640	C	T	SNP	AP2B1	NM_001030006.1	human	genbank	58_37c	+1	reviewed	silent	c.717	p.S239	1.000	HMMPfam_Adaptin_N,superfamily_ARM repeat	HMMSmart_SM00185,HMMPfam_Adaptin_N,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_Subdomain of clathrin and coatomer appendage domain,superfamily_Clathrin adaptor appendage domain,HMMPfam_B2-adapt-app_C,superfamily_ARM repeat	-	no_errors
APBA2	0	genome.wustl.edu	37	15	29367161	29367161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	29367161	29367161	G	A	SNP	APBA2	NM_005503.3	human	genbank	58_37c	+1	reviewed	missense	c.989	p.R330H	1.000	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729	-	no_errors
APEX2	0	genome.wustl.edu	37	X	55029489	55029489	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	55029489	55029489	C	T	SNP	APEX2	NM_014481.2	human	genbank	58_37c	+1	reviewed	missense	c.517	p.R173C	1.000	HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos	PatternScan_AP_NUCLEASE_F1_1,PatternScan_AP_NUCLEASE_F1_2,PatternScan_AP_NUCLEASE_F1_3,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos,HMMPfam_zf-GRF	-	no_errors
APITD1	0	genome.wustl.edu	37	1	10502382	10502382	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	10502382	10502382	C	A	SNP	APITD1	NM_199294.1	human	genbank	58_37c	+1	reviewed	missense	c.337	p.Q113K	0.776	NULL	superfamily_Histone-fold	-	no_errors
APOB	0	genome.wustl.edu	37	2	21233643	21233643	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	21233643	21233643	G	A	SNP	APOB	NM_000384.2	human	genbank	58_37c	-1	reviewed	missense	c.6097	p.P2033S	0.088	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
ARHGAP18	0	genome.wustl.edu	37	6	130031253	130031253	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	130031253	130031253	A	G	SNP	ARHGAP18	NM_033515.2	human	genbank	58_37c	-1	validated	missense	c.29	p.V10A	0.999	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
ARHGAP33	0	genome.wustl.edu	37	19	36278850	36278850	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	36278850	36278850	T	C	SNP	ARHGAP33	NM_052948.3	human	genbank	58_37c	+1	reviewed	missense	c.2900	p.L967P	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMSmart_SH3,superfamily_SH3,superfamily_PX,superfamily_Rho_GAP,HMMPfam_SH3_2	-	no_errors
ARHGAP39	0	genome.wustl.edu	37	8	145830970	145830970	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	145830970	145830970	C	T	SNP	ARHGAP39	NM_025251.1	human	genbank	58_37c	-1	validated	silent	c.30	p.R10	0.933	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_MyTH4,HMMSmart_SM00139,HMMPfam_WW,HMMSmart_SM00456,superfamily_WW domain,superfamily_GTPase activation domain GAP	-	no_errors
ARMC2	0	genome.wustl.edu	37	6	109190033	109190033	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	109190033	109190033	A	G	SNP	ARMC2	NM_032131.4	human	genbank	58_37c	+1	validated	missense	c.298	p.K100E	0.968	NULL	superfamily_ARM-type_fold	-	no_errors
ARMC2	0	genome.wustl.edu	37	6	109215690	109215690	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	109215690	109215690	C	T	SNP	ARMC2	NM_032131.4	human	genbank	58_37c	+1	validated	missense	c.692	p.A231V	0.000	NULL	superfamily_ARM-type_fold	-	no_errors
ASPRV1	0	genome.wustl.edu	37	2	70188297	70188297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	70188297	70188297	G	A	SNP	ASPRV1	NM_152792.2	human	genbank	58_37c	-1	validated	missense	c.524	p.P175L	0.003	NULL	PatternScan_ASP_PROTEASE,superfamily_Pept_Aspartic	-	no_errors
ASTE1	0	genome.wustl.edu	37	3	130743497	130743498	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	130743497	130743498	AA	-	DEL	ASTE1	NM_014065.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.654_653	p.F218fs	0.997:1.000	superfamily_SSF88723	HMMPfam_XPG_N,superfamily_SSF88723	-	no_errors
ATP4B	0	genome.wustl.edu	37	13	114303781	114303781	+	Missense_Mutation	SNP	C	C	T	rs143448518	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	114303781	114303781	C	T	SNP	ATP4B	NM_000705.3	human	genbank	58_37c	-1	reviewed	missense	c.784	p.V262M	0.949	HMMPfam_Na_K-ATPase	HMMPfam_Na_K-ATPase,PatternScan_ATPASE_NA_K_BETA_1,PatternScan_ATPASE_NA_K_BETA_2	-	no_errors
BAIAP2L1	0	genome.wustl.edu	37	7	97939890	97939890	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	97939890	97939890	G	A	SNP	BAIAP2L1	NM_018842.4	human	genbank	58_37c	-1	reviewed	silent	c.822	p.Y274	0.434	NULL	HMMSmart_SH3,superfamily_SH3,HMMPfam_SH3_2,HMMPfam_IMD	-	no_errors
BCAS3	0	genome.wustl.edu	37	17	58988000	58988000	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	58988000	58988000	G	A	SNP	BCAS3	NM_001099432.1	human	genbank	58_37c	+1	validated	silent	c.930	p.R310	0.549	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like	-	no_errors
BRD8	0	genome.wustl.edu	37	5	137476347	137476347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	137476347	137476347	G	A	SNP	BRD8	ENST00000427976	human	ensembl	58_37c	-1	known	missense	c.980	p.T327M	0.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain	-	no_start_codon
BRWD1	0	genome.wustl.edu	37	21	40570950	40570950	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	21	40570950	40570950	A	T	SNP	BRWD1	NM_018963.3	human	genbank	58_37c	-1	reviewed	missense	c.5392	p.S1798T	0.004	superfamily_WD40 repeat-like	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_BROMODOMAIN_1,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
C13orf23	0	genome.wustl.edu	37	13	39603474	39603474	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	39603474	39603474	T	C	SNP	C13orf23	NM_025138.3	human	genbank	58_37c	-1	validated	missense	c.219	p.I73M	1.000	NULL	NULL	-	no_errors
C13orf28	0	genome.wustl.edu	37	13	113088826	113088826	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	113088826	113088826	G	T	SNP	C13orf28	NM_145248.3	human	genbank	58_37c	+1	provisional	missense	c.551	p.R184M	0.000	NULL	NULL	-	no_errors
C19orf71	0	genome.wustl.edu	37	19	3543380	3543380	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	3543380	3543380	C	G	SNP	C19orf71	NM_001135580.1	human	genbank	58_37c	+1	validated	nonsense	c.231	p.Y77*	0.851	NULL	NULL	-	no_errors
C1orf123	0	genome.wustl.edu	37	1	53681666	53681668	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	53681666	53681668	CTC	-	DEL	C1orf123	NM_017887.1	human	genbank	58_37c	-1	predicted	in_frame_del	c.402_400	p.E134in_frame_del	0.991:1.000:1.000	HMMPfam_DUF866	HMMPfam_DUF866	-	no_errors
C1orf58	0	genome.wustl.edu	37	1	222906001	222906001	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	222906001	222906001	C	A	SNP	C1orf58	NM_144695.2	human	genbank	58_37c	+1	validated	missense	c.1181	p.P394H	1.000	NULL	HMMPfam_BRO1	-	no_errors
C20orf186	0	genome.wustl.edu	37	20	31671634	31671634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	20	31671634	31671634	G	A	SNP	C20orf186	NM_182519.2	human	genbank	58_37c	+1	validated	missense	c.631	p.V211M	0.722	HMMPfam_LBP_BPI_CETP,HMMSmart_SM00328	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,HMMPfam_LBP_BPI_CETP,HMMSmart_SM00328,superfamily_Bactericidal permeability-increasing protein BPI	-	no_errors
C22orf40	0	genome.wustl.edu	37	22	46640993	46640993	+	Missense_Mutation	SNP	G	G	A	rs151250954	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	46640993	46640993	G	A	SNP	C22orf40	NM_207327.4	human	genbank	58_37c	-1	validated	missense	c.368	p.T123M	0.000	NULL	HMMPfam_C6_DPF	-	no_errors
C2orf55	0	genome.wustl.edu	37	2	99449325	99449325	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	99449325	99449325	C	A	SNP	C2orf55	NM_207362.2	human	genbank	58_37c	-1	validated	missense	c.375	p.Q125H	1.000	NULL	NULL	-	no_errors
C2orf76	0	genome.wustl.edu	37	2	120060116	120060116	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	120060116	120060116	T	C	SNP	C2orf76	NM_001017927.2	human	genbank	58_37c	-1	predicted	missense	c.313	p.T105A	1.000	HMMPfam_DUF2340	HMMPfam_DUF2340	-	no_errors
C5orf36	0	genome.wustl.edu	37	5	93727356	93727358	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	93727356	93727358	CTC	-	DEL	C5orf36	NM_001145678.1	human	genbank	58_37c	-1	validated	in_frame_del	c.3340_3338	p.G1113in_frame_del	0.997:1.000:1.000	NULL	NULL	-	no_errors
C8G	0	genome.wustl.edu	37	9	139840387	139840387	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	139840387	139840387	G	T	SNP	C8G	NM_000606.2	human	genbank	58_37c	+1	validated	silent	c.282	p.G94	1.000	HMMPfam_Lipocalin,superfamily_Calycin	HMMPfam_Lipocalin,PatternScan_LIPOCALIN,superfamily_Calycin	-	no_errors
C9orf102	0	genome.wustl.edu	37	9	98703810	98703810	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	98703810	98703810	A	G	SNP	C9orf102	NM_001010895.2	human	genbank	58_37c	+1	validated	missense	c.1859	p.N620S	1.000	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C9orf25	0	genome.wustl.edu	37	9	34402458	34402458	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	34402458	34402458	C	T	SNP	C9orf25	NM_147202.1	human	genbank	58_37c	-1	validated	missense	c.220	p.V74I	1.000	NULL	NULL	-	no_errors
CABYR	0	genome.wustl.edu	37	18	21735866	21735866	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	21735866	21735866	C	T	SNP	CABYR	NM_012189.2	human	genbank	58_37c	+1	reviewed	missense	c.401	p.T134M	0.000	NULL	HMMPfam_RIIa,HMMSmart_SM00394,superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	-	no_errors
CACNA1E	0	genome.wustl.edu	37	1	181690990	181690990	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	181690990	181690990	G	A	SNP	CACNA1E	NM_000721.2	human	genbank	58_37c	+1	reviewed	missense	c.2053	p.V685M	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CACNA1H	0	genome.wustl.edu	37	16	1248638	1248638	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	1248638	1248638	C	G	SNP	CACNA1H	NM_021098.2	human	genbank	58_37c	+1	reviewed	missense	c.667	p.L223V	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CACNB2	0	genome.wustl.edu	37	10	18827198	18827198	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	18827198	18827198	C	A	SNP	CACNB2	NM_201596.2	human	genbank	58_37c	+1	reviewed	silent	c.1392	p.T464	0.851	HMMPfam_Ca_channel_B,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Ca_channel_B,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CAPRIN2	0	genome.wustl.edu	37	12	30904069	30904069	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	30904069	30904069	T	C	SNP	CAPRIN2	NM_001002259.1	human	genbank	58_37c	-1	validated	splice_site	c.421-2	e2-2	1.000	-	-	-	no_errors
CBWD1	0	genome.wustl.edu	37	9	163985	163985	+	Silent	SNP	A	A	G	rs148402215	byFrequency	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	163985	163985	A	G	SNP	CBWD1	NM_018491.3	human	genbank	58_37c	-1	validated	silent	c.483	p.Y161	0.999	HMMPfam_cobW,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_cobW,HMMPfam_CobW_C,superfamily_Hypothetical protein YjiA C-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CCDC138	0	genome.wustl.edu	37	2	109432417	109432417	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	109432417	109432417	T	C	SNP	CCDC138	ENST00000456512	human	ensembl	58_37c	+1	known	missense	c.752	p.F251S	0.998	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
CCDC24	0	genome.wustl.edu	37	1	44461500	44461500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	44461500	44461500	G	A	SNP	CCDC24	NM_152499.1	human	genbank	58_37c	+1	provisional	missense	c.673	p.G225R	0.000	NULL	NULL	-	no_errors
CDC6	0	genome.wustl.edu	37	17	38449856	38449857	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	38449856	38449857	AT	-	DEL	CDC6	NM_001254.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.809_810	p.M271fs	0.453:0.405	HMMSmart_AAA,HMMPfam_AAA,superfamily_SSF52540	HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Cdc6_C,superfamily_SSF46785,superfamily_SSF52540	-	no_errors
CDK11B	0	genome.wustl.edu	37	1	1573880	1573880	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	1573880	1573880	C	T	SNP	CDK11B	NM_033487.1	human	genbank	58_37c	-1	reviewed	missense	c.556	p.A186T	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Pkinase	-	no_errors
CDK5RAP2	0	genome.wustl.edu	37	9	123220813	123220813	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	123220813	123220813	C	T	SNP	CDK5RAP2	NM_018249.4	human	genbank	58_37c	-1	reviewed	missense	c.2290	p.A764T	0.000	NULL	HMMPfam_Microtub_assoc	-	no_errors
CDYL	0	genome.wustl.edu	37	6	4943948	4943948	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	4943948	4943948	C	T	SNP	CDYL	NM_004824.3	human	genbank	58_37c	+1	reviewed	silent	c.1290	p.G430	1.000	HMMPfam_ECH,superfamily_SSF52096	HMMPfam_Chromo,HMMSmart_CHROMO,PatternScan_CHROMO_1,HMMPfam_ECH,superfamily_Chromodomain-like,superfamily_SSF52096	-	no_errors
CELA3B	0	genome.wustl.edu	37	1	22310304	22310304	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	22310304	22310304	C	T	SNP	CELA3B	NM_007352.2	human	genbank	58_37c	+1	reviewed	silent	c.480	p.T160	0.237	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
CENPF	0	genome.wustl.edu	37	1	214814654	214814654	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	214814654	214814654	G	A	SNP	CENPF	NM_016343.3	human	genbank	58_37c	+1	reviewed	missense	c.2973	p.M991I	0.130	NULL	superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F,HMMPfam_Cenp-F_N,HMMPfam_Cenp-F_leu_zip,superfamily_Spectrin repeat	-	no_errors
CEP350	0	genome.wustl.edu	37	1	179959671	179959671	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	179959671	179959671	A	G	SNP	CEP350	NM_014810.4	human	genbank	58_37c	+1	reviewed	silent	c.150	p.V50	0.998	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_SSF74924	-	no_errors
CHST11	0	genome.wustl.edu	37	12	105151273	105151273	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	105151273	105151273	C	T	SNP	CHST11	NM_018413.5	human	genbank	58_37c	+1	validated	missense	c.751	p.R251W	1.000	HMMPfam_Sulfotransfer_2	HMMPfam_Sulfotransfer_2	-	no_errors
CITED1	0	genome.wustl.edu	37	X	71521829	71521829	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	71521829	71521829	G	A	SNP	CITED1	NM_001144885.1	human	genbank	58_37c	-1	reviewed	missense	c.404	p.A135V	0.003	HMMPfam_CITED	HMMPfam_CITED	-	no_errors
CLCN2	0	genome.wustl.edu	37	3	184069902	184069902	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	184069902	184069902	G	T	SNP	CLCN2	NM_004366.4	human	genbank	58_37c	-1	reviewed	missense	c.2314	p.L772M	0.998	HMMPfam_CBS	HMMPfam_CBS,HMMPfam_Voltage_CLC,superfamily_Clc chloride channel,superfamily_CBS-domain	-	no_errors
CLCN2	0	genome.wustl.edu	37	3	184072690	184072690	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	184072690	184072690	A	G	SNP	CLCN2	NM_004366.4	human	genbank	58_37c	-1	reviewed	splice_site	c.1396+2	e13+2	1.000	-	-	-	no_errors
CLRN3	0	genome.wustl.edu	37	10	129676623	129676623	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	129676623	129676623	G	A	SNP	CLRN3	NM_152311.3	human	genbank	58_37c	-1	validated	silent	c.471	p.S157	0.000	NULL	NULL	-	no_errors
CNGB3	0	genome.wustl.edu	37	8	87683247	87683247	+	Missense_Mutation	SNP	G	G	A	rs146488853	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	87683247	87683247	G	A	SNP	CNGB3	NM_019098.4	human	genbank	58_37c	-1	reviewed	missense	c.418	p.R140C	0.903	NULL	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMPfam_Ion_trans,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cAMP-binding domain-like,superfamily_Voltage-gated potassium channels	-	no_errors
CNIH3	0	genome.wustl.edu	37	1	224872505	224872505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	224872505	224872505	G	A	SNP	CNIH3	NM_152495.1	human	genbank	58_37c	+1	provisional	missense	c.158	p.R53Q	1.000	HMMPfam_Cornichon	HMMPfam_Cornichon,PatternScan_CORNICHON	-	no_errors
CPEB1	0	genome.wustl.edu	37	15	83240148	83240148	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	83240148	83240148	G	A	SNP	CPEB1	NM_030594.3	human	genbank	58_37c	-1	reviewed	nonsense	c.325	p.R109*	1.000	NULL	superfamily_SSF54928	-	no_errors
CREB5	0	genome.wustl.edu	37	7	28610052	28610052	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	28610052	28610052	C	T	SNP	CREB5	NM_182898.2	human	genbank	58_37c	+1	reviewed	missense	c.361	p.R121W	0.984	NULL	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_bZIP_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
CTSL2	0	genome.wustl.edu	37	9	99797876	99797876	+	Missense_Mutation	SNP	C	C	T	rs149543665	byFrequency	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	99797876	99797876	C	T	SNP	CTSL2	NM_001333.2	human	genbank	58_37c	-1	reviewed	missense	c.721	p.A241T	1.000	HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,superfamily_SSF54001	PatternScan_THIOL_PROTEASE_CYS,PatternScan_THIOL_PROTEASE_HIS,PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,HMMPfam_Inhibitor_I29,superfamily_SSF54001	-	no_errors
CTTNBP2	0	genome.wustl.edu	37	7	117513445	117513445	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	117513445	117513445	C	T	SNP	CTTNBP2	NM_033427.2	human	genbank	58_37c	-1	reviewed	missense	c.25	p.E9K	1.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_CortBP2	-	no_errors
CWC22	0	genome.wustl.edu	37	2	180809917	180809917	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	180809917	180809917	G	A	SNP	CWC22	NM_020943.2	human	genbank	58_37c	-1	validated	missense	c.2666	p.S889F	0.980	NULL	HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544,superfamily_ARM repeat	-	no_errors
CWF19L1	0	genome.wustl.edu	37	10	102006652	102006652	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	102006652	102006652	T	C	SNP	CWF19L1	NM_018294.4	human	genbank	58_37c	-1	validated	missense	c.749	p.D250G	0.927	NULL	HMMPfam_CwfJ_C_2,HMMPfam_CwfJ_C_1,superfamily_HIT-like	-	no_errors
CYFIP2	0	genome.wustl.edu	37	5	156766240	156766240	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	156766240	156766240	A	G	SNP	CYFIP2	NM_001037332.2	human	genbank	58_37c	+1	validated	missense	c.2561	p.Y854C	1.000	HMMPfam_FragX_IP	HMMPfam_FragX_IP	-	no_errors
DALRD3	0	genome.wustl.edu	37	3	49055971	49055971	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	49055971	49055971	C	T	SNP	DALRD3	NM_001009996.1	human	genbank	58_37c	-1	validated	silent	c.27	p.G9	1.000	NULL	HMMPfam_DALR_1,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	-	no_errors
DBR1	0	genome.wustl.edu	37	3	137880738	137880739	+	In_Frame_Ins	INS	-	-	CAT	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	137880738	137880739	-	CAT	INS	DBR1	NM_016216.2	human	genbank	58_37c	-1	validated	in_frame_ins	c.1628_1627	p.543in_frame_insD	0.000:0.038	NULL	HMMPfam_Metallophos,HMMPfam_DBR1,superfamily_Metallo-dependent phosphatases	-	no_errors
DCHS1	0	genome.wustl.edu	37	11	6653279	6653279	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	6653279	6653279	C	T	SNP	DCHS1	NM_003737.2	human	genbank	58_37c	-1	reviewed	missense	c.3464	p.R1155H	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
DCLK1	0	genome.wustl.edu	37	13	36445388	36445388	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	36445388	36445388	T	C	SNP	DCLK1	NM_004734.3	human	genbank	58_37c	-1	validated	missense	c.913	p.S305G	1.000	NULL	HMMSmart_S_TKc,HMMPfam_DCX,HMMSmart_DCX,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF89837	-	no_errors
DEFB136	0	genome.wustl.edu	37	8	11831477	11831477	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	11831477	11831477	G	A	SNP	DEFB136	NM_001033018.2	human	genbank	58_37c	-1	provisional	missense	c.206	p.P69L	0.003	NULL	HMMPfam_Defensin_beta	-	no_errors
DGKB	0	genome.wustl.edu	37	7	14758165	14758165	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	14758165	14758165	A	G	SNP	DGKB	NM_004080.2	human	genbank	58_37c	-1	reviewed	splice_site	c.466+2	e5+2	0.999	-	-	-	no_errors
DHDDS	0	genome.wustl.edu	37	1	26764736	26764736	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	26764736	26764736	G	A	SNP	DHDDS	ENST00000427245	human	ensembl	58_37c	+1	known	missense	c.13	p.A5T	0.863	HMMPfam_Prenyltransf,superfamily_Undecaprenyl diphosphate synthase	HMMPfam_Prenyltransf,superfamily_Undecaprenyl diphosphate synthase	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
DHX34	0	genome.wustl.edu	37	19	47884112	47884112	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	47884112	47884112	C	T	SNP	DHX34	NM_014681.5	human	genbank	58_37c	+1	reviewed	nonsense	c.3022	p.Q1008*	0.997	NULL	HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_HA2,HMMPfam_DUF1605,HMMSmart_SM00487,PatternScan_RUBREDOXIN,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DMKN	0	genome.wustl.edu	37	19	35994348	35994348	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	35994348	35994348	T	C	SNP	DMKN	NM_001126056.1	human	genbank	58_37c	-1	reviewed	missense	c.1226	p.D409G	0.998	NULL	NULL	-	no_errors
DNAJC7	0	genome.wustl.edu	37	17	40141457	40141457	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	40141457	40141457	C	T	SNP	DNAJC7	NM_003315.3	human	genbank	58_37c	-1	reviewed	missense	c.718	p.A240T	1.000	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452	HMMPfam_TPR_1,HMMPfam_DnaJ,HMMSmart_DnaJ,superfamily_DnaJ_N,PatternScan_DNAJ_1,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
DNALI1	0	genome.wustl.edu	37	1	38023344	38023344	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	38023344	38023344	C	T	SNP	DNALI1	NM_003462.3	human	genbank	58_37c	+1	reviewed	silent	c.288	p.P96	0.986	HMMPfam_Ax_dynein_light	HMMPfam_Ax_dynein_light	-	no_errors
DNTTIP2	0	genome.wustl.edu	37	1	94342201	94342201	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	94342201	94342201	C	T	SNP	DNTTIP2	NM_014597.3	human	genbank	58_37c	-1	provisional	silent	c.1290	p.A430	0.000	NULL	HMMPfam_Fcf2	-	no_errors
DOT1L	0	genome.wustl.edu	37	19	2185914	2185914	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	2185914	2185914	C	A	SNP	DOT1L	NM_032482.2	human	genbank	58_37c	+1	validated	missense	c.186	p.D62E	1.000	superfamily_SSF53335	HMMPfam_DOT1,HMMPfam_AT_hook,HMMSmart_AT_hook,superfamily_SSF53335	-	no_errors
DSP	0	genome.wustl.edu	37	6	7575559	7575559	+	Missense_Mutation	SNP	C	C	T	rs141834182	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	7575559	7575559	C	T	SNP	DSP	NM_004415.2	human	genbank	58_37c	+1	reviewed	missense	c.2468	p.S823L	0.974	superfamily_Prefoldin	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Prefoldin,superfamily_tRNA-binding arm,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat	-	no_errors
DUSP27	0	genome.wustl.edu	37	1	167086745	167086745	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	167086745	167086745	C	T	SNP	DUSP27	NM_001080426.1	human	genbank	58_37c	+1	provisional	missense	c.386	p.A129V	0.936	NULL	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
DYRK2	0	genome.wustl.edu	37	12	68050943	68050943	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	68050943	68050943	G	A	SNP	DYRK2	NM_006482.2	human	genbank	58_37c	+1	reviewed	missense	c.256	p.G86R	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
ECHDC2	0	genome.wustl.edu	37	1	53362256	53362256	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	53362256	53362256	C	T	SNP	ECHDC2	NM_018281.2	human	genbank	58_37c	-1	validated	missense	c.722	p.R241Q	0.691	superfamily_SSF52096	HMMPfam_ECH,superfamily_SSF52096	-	no_errors
EIF4A3	0	genome.wustl.edu	37	17	78109862	78109862	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	78109862	78109862	C	T	SNP	EIF4A3	NM_014740.3	human	genbank	58_37c	-1	reviewed	missense	c.1160	p.R387H	0.998	superfamily_SSF52540	PatternScan_DEAD_ATP_HELICASE,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
EIF4G3	0	genome.wustl.edu	37	1	21180137	21180137	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	21180137	21180137	C	T	SNP	EIF4G3	NM_003760.3	human	genbank	58_37c	-1	validated	missense	c.3299	p.R1100K	1.000	NULL	HMMPfam_W2,HMMSmart_SM00515,HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544,superfamily_ARM repeat,superfamily_PH domain-like	-	no_errors
ELOVL4	0	genome.wustl.edu	37	6	80656915	80656915	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	80656915	80656915	A	G	SNP	ELOVL4	NM_022726.3	human	genbank	58_37c	-1	reviewed	missense	c.82	p.W28R	1.000	NULL	HMMPfam_ELO,PatternScan_ELO	-	no_errors
ENSG00000197476	0	genome.wustl.edu	37	16	31985172	31985172	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	31985172	31985172	G	A	SNP	ENSG00000197476	ENST00000356559	human	ensembl	58_37c	+1	known	missense	c.118	p.A40T	1.000	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	-	no_start_codon:no_stop_codon
ENSG00000221422	0	genome.wustl.edu	37	12	69593914	69593914	+	RNA	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	69593914	69593914	G	A	SNP	ENSG00000221422	ENST00000408495	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.062	-	-	-	no_errors
ENSG00000230425	0	genome.wustl.edu	37	10	43232184	43232184	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	43232184	43232184	C	T	SNP	ENSG00000230425	ENST00000453416	human	ensembl	58_37c	+1	known	silent	c.288	p.C96	1.000	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_start_codon:pseudogene:no_stop_codon
ENSG00000231972	0	genome.wustl.edu	37	15	92294238	92294238	+	Silent	SNP	T	T	A	rs189062088	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	92294238	92294238	T	A	SNP	ENSG00000231972	ENST00000419607	human	ensembl	58_37c	+1	known	silent	c.1287	p.G429	0.000	NULL	NULL	-	no_start_codon:no_stop_codon
ENSG00000251057	0	genome.wustl.edu	37	1	118320600	118320601	+	RNA	INS	-	-	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	118320600	118320601	-	T	INS	ENSG00000251057	ENST00000504345	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.027:0.019	-	-	-	no_errors
ENSG00000251626	0	genome.wustl.edu	37	22	40755272	40755272	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	40755272	40755272	G	A	SNP	ENSG00000251626	ENST00000428371	human	ensembl	58_37c	+1	known	missense	c.1946	p.S649N	0.999	superfamily_L-aspartase-like	HMMPfam_Lyase_1,superfamily_L-aspartase-like,PatternScan_FUMARATE_LYASES	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
EVC	0	genome.wustl.edu	37	4	5721019	5721019	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	5721019	5721019	G	A	SNP	EVC	NM_153717.2	human	genbank	58_37c	+1	reviewed	silent	c.219	p.A73	0.000	NULL	NULL	-	no_errors
EVC	0	genome.wustl.edu	37	4	5795342	5795342	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	5795342	5795342	T	C	SNP	EVC	NM_153717.2	human	genbank	58_37c	+1	reviewed	missense	c.1784	p.M595T	1.000	NULL	NULL	-	no_errors
EXT2	0	genome.wustl.edu	37	11	44228469	44228469	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	44228469	44228469	T	A	SNP	EXT2	NM_000401.3	human	genbank	58_37c	+1	reviewed	missense	c.1661	p.I554N	1.000	HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Exostosin,HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
EZH2	0	genome.wustl.edu	37	7	148525902	148525902	+	Silent	SNP	G	G	A	rs137864062	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	148525902	148525902	G	A	SNP	EZH2	NM_004456.3	human	genbank	58_37c	-1	reviewed	silent	c.555	p.D185	0.201	HMMSmart_SANT	HMMSmart_SANT,HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199	-	no_errors
F2R	0	genome.wustl.edu	37	5	76028893	76028893	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	76028893	76028893	G	A	SNP	F2R	NM_001992.3	human	genbank	58_37c	+1	reviewed	silent	c.843	p.V281	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
FAM120C	0	genome.wustl.edu	37	X	54112279	54112279	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	54112279	54112279	G	A	SNP	FAM120C	NM_017848.4	human	genbank	58_37c	-1	validated	missense	c.2708	p.P903L	0.948	NULL	NULL	-	no_errors
FAM162B	0	genome.wustl.edu	37	6	117083229	117083229	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	117083229	117083229	C	T	SNP	FAM162B	NM_001085480.2	human	genbank	58_37c	-1	validated	missense	c.301	p.A101T	1.000	HMMPfam_DUF1075	HMMPfam_DUF1075	-	no_errors
FAM170B	0	genome.wustl.edu	37	10	50340002	50340002	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	50340002	50340002	T	C	SNP	FAM170B	ENST00000311787	human	ensembl	58_37c	-1	known	missense	c.508	p.K170E	0.026	NULL	NULL	-	no_errors
FAM171B	0	genome.wustl.edu	37	2	187559047	187559048	+	In_Frame_Ins	INS	-	-	CAA	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	187559047	187559048	-	CAA	INS	FAM171B	NM_177454.3	human	genbank	58_37c	+1	validated	in_frame_ins	c.147_148	p.53in_frame_insQ	0.634:0.592	NULL	HMMPfam_UPF0560	-	no_errors
FAM181A	0	genome.wustl.edu	37	14	94391640	94391641	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	14	94391640	94391641	-	T	INS	FAM181A	NM_138344.3	human	genbank	58_37c	+1	predicted	frame_shift_ins	c.23_24	p.S9fs	0.000:0.000	NULL	NULL	-	no_errors
FAM200B	0	genome.wustl.edu	37	4	15689207	15689207	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	15689207	15689207	C	T	SNP	FAM200B	NM_001145191.1	human	genbank	58_37c	+1	validated	nonsense	c.607	p.R203*	0.940	NULL	NULL	-	no_errors
FANCC	0	genome.wustl.edu	37	9	97873907	97873907	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	97873907	97873907	A	G	SNP	FANCC	NM_000136.2	human	genbank	58_37c	-1	reviewed	silent	c.1167	p.G389	0.000	HMMPfam_Fanconi_C	HMMPfam_Fanconi_C	-	no_errors
FGD5	0	genome.wustl.edu	37	3	14964007	14964007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	14964007	14964007	C	T	SNP	FGD5	NM_152536.3	human	genbank	58_37c	+1	validated	silent	c.3759	p.C1253	0.853	HMMPfam_FYVE,HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1,superfamily_PH domain-like	-	no_errors
FLNC	0	genome.wustl.edu	37	7	128478072	128478072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	128478072	128478072	G	A	SNP	FLNC	NM_001458.4	human	genbank	58_37c	+1	reviewed	missense	c.1001	p.R334H	1.000	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin	HMMSmart_SM00557,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_E set domains,superfamily_Calponin-homology domain CH-domain,HMMPfam_Filamin	-	no_errors
FRZB	0	genome.wustl.edu	37	2	183703303	183703303	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	183703303	183703303	G	A	SNP	FRZB	NM_001463.3	human	genbank	58_37c	-1	reviewed	missense	c.631	p.H211Y	1.000	superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643	superfamily_Frizzled cysteine-rich domain,superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643,HMMPfam_Fz,HMMSmart_SM00063	-	no_errors
FUT5	0	genome.wustl.edu	37	19	5867314	5867314	+	Missense_Mutation	SNP	C	C	A	rs61731655	byFrequency	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	5867314	5867314	C	A	SNP	FUT5	NM_002034.2	human	genbank	58_37c	-1	validated	missense	c.423	p.Q141H	0.002	HMMPfam_Glyco_transf_10	HMMPfam_Glyco_transf_10	-	no_errors
GALNT6	0	genome.wustl.edu	37	12	51754571	51754571	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	51754571	51754571	C	T	SNP	GALNT6	NM_007210.3	human	genbank	58_37c	-1	reviewed	silent	c.1101	p.E367	0.987	HMMPfam_Glycos_transf_2,superfamily_SSF53448	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,HMMPfam_Glycos_transf_2,superfamily_RicinB_like,superfamily_SSF53448	-	no_errors
GALNT8	0	genome.wustl.edu	37	12	4870281	4870281	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	4870281	4870281	T	C	SNP	GALNT8	NM_017417.1	human	genbank	58_37c	+1	reviewed	missense	c.1331	p.V444A	1.000	superfamily_SSF53448	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,HMMPfam_Glycos_transf_2,superfamily_RicinB_like,superfamily_SSF53448	-	no_errors
GBA3	0	genome.wustl.edu	37	4	22749085	22749085	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	22749085	22749085	T	C	SNP	GBA3	NM_020973.3	human	genbank	58_37c	+1	validated	silent	c.453	p.S151	0.000	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases,PatternScan_GLYCOSYL_HYDROL_F1_2	-	pseudogene
GNLY	0	genome.wustl.edu	37	2	85922455	85922455	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	85922455	85922455	C	T	SNP	GNLY	NM_006433.3	human	genbank	58_37c	+1	reviewed	missense	c.65	p.S22F	0.288	NULL	HMMPfam_SapB_2,HMMSmart_SM00741,superfamily_Saposin	-	no_errors
GPM6B	0	genome.wustl.edu	37	X	13835019	13835019	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	13835019	13835019	T	C	SNP	GPM6B	NM_001001995.1	human	genbank	58_37c	-1	reviewed	missense	c.5	p.K2R	1.000	NULL	HMMPfam_Myelin_PLP,HMMSmart_PLP,PatternScan_MYELIN_PLP_1,PatternScan_MYELIN_PLP_2	-	no_errors
GPR112	0	genome.wustl.edu	37	X	135441601	135441601	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	135441601	135441601	A	G	SNP	GPR112	NM_153834.3	human	genbank	58_37c	+1	reviewed	silent	c.7131	p.A2377	0.569	NULL	HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,superfamily_ConA_like_lec_gl,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GPR84	0	genome.wustl.edu	37	12	54757017	54757017	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	54757017	54757017	G	A	SNP	GPR84	NM_020370.2	human	genbank	58_37c	-1	validated	nonsense	c.619	p.R207*	0.014	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GPR98	0	genome.wustl.edu	37	5	90151694	90151694	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	90151694	90151694	A	G	SNP	GPR98	NM_032119.3	human	genbank	58_37c	+1	reviewed	missense	c.17731	p.T5911A	1.000	NULL	HMMPfam_GPS,PatternScan_LIPOYL,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMPfam_EPTP,PatternScan_A_DEAMINASE,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
HEATR2	0	genome.wustl.edu	37	7	819661	819661	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	819661	819661	C	G	SNP	HEATR2	NM_017802.3	human	genbank	58_37c	+1	validated	missense	c.2311	p.L771V	1.000	HMMPfam_HEAT,superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
HGF	0	genome.wustl.edu	37	7	81339534	81339534	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	81339534	81339534	C	T	SNP	HGF	NM_000601.4	human	genbank	58_37c	-1	reviewed	silent	c.1470	p.T490	1.000	NULL	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_PAN_1,HMMSmart_SM00473,superfamily_Trypsin-like serine proteases,superfamily_Kringle-like,PatternScan_KRINGLE_1,superfamily_Hairpin loop containing domain-like	-	no_errors
HGFAC	0	genome.wustl.edu	37	4	3445881	3445881	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	3445881	3445881	C	T	SNP	HGFAC	NM_001528.2	human	genbank	58_37c	+1	reviewed	silent	c.591	p.C197	0.007	HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,superfamily_SSF57196	HMMPfam_Kringle,HMMSmart_KR,HMMPfam_fn1,HMMSmart_FN1,PatternScan_FN1_1,HMMPfam_fn2,HMMSmart_FN2,PatternScan_FN2_1,HMMPfam_Trypsin,HMMSmart_Tryp_SPc,HMMPfam_EGF,HMMSmart_EGF,superfamily_Pept_Ser_Cys,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Kringle-like,PatternScan_KRINGLE_1,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_SSF57196	-	no_errors
HIST1H2BB	0	genome.wustl.edu	37	6	26043595	26043595	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	26043595	26043595	C	A	SNP	HIST1H2BB	NM_021062.2	human	genbank	58_37c	-1	reviewed	silent	c.291	p.T97	0.996	HMMSmart_H2B,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_H2B,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HIST3H3	0	genome.wustl.edu	37	1	228612752	228612752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	228612752	228612752	G	A	SNP	HIST3H3	NM_003493.2	human	genbank	58_37c	-1	reviewed	missense	c.275	p.A92V	1.000	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_1,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HNF1A	0	genome.wustl.edu	37	12	121432116	121432117	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	121432116	121432117	-	C	INS	HNF1A	NM_000545.5	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.863_864	p.P289fs	0.997:0.998	HMMPfam_HNF-1B_C,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_HNF-1B_C,HMMPfam_HNF-1A_C,HMMPfam_HNF-1_N,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1,superfamily_Dimerization cofactor of HNF-1 alpha	-	no_errors
HOOK3	0	genome.wustl.edu	37	8	42868496	42868497	+	Frame_Shift_Ins	INS	-	-	AG	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	42868496	42868497	-	AG	INS	HOOK3	NM_032410.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1969_1970	p.M660fs	1.000:1.000	HMMPfam_HOOK	HMMPfam_HOOK	-	no_errors
HOXD8	0	genome.wustl.edu	37	2	176996277	176996277	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	176996277	176996277	C	T	SNP	HOXD8	NM_019558.2	human	genbank	58_37c	+1	reviewed	silent	c.810	p.D270	0.972	NULL	HMMPfam_Homeobox,HMMSmart_HOX,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
HSP90B3P	0	genome.wustl.edu	37	1	92108674	92108674	+	RNA	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	92108674	92108674	A	G	SNP	HSP90B3P	NR_003130.2	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
HSPA12A	0	genome.wustl.edu	37	10	118458152	118458152	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	118458152	118458152	C	T	SNP	HSPA12A	NM_025015.2	human	genbank	58_37c	-1	validated	silent	c.540	p.A180	0.031	superfamily_SSF53067	PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF53067	-	no_errors
HTR1A	0	genome.wustl.edu	37	5	63256897	63256897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	63256897	63256897	C	T	SNP	HTR1A	NM_000524.2	human	genbank	58_37c	-1	validated	missense	c.650	p.R217H	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HTR1A	0	genome.wustl.edu	37	5	63257403	63257403	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	63257403	63257403	G	A	SNP	HTR1A	NM_000524.2	human	genbank	58_37c	-1	validated	silent	c.144	p.F48	1.000	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HUWE1	0	genome.wustl.edu	37	X	53589093	53589093	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	53589093	53589093	C	T	SNP	HUWE1	ENST00000427052	human	ensembl	58_37c	-1	known	missense	c.4417	p.G1473R	1.000	superfamily_ARM repeat	HMMPfam_UBA,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WWE,superfamily_UBA-like,HMMSmart_SM00165,superfamily_ARM repeat	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
IARS	0	genome.wustl.edu	37	9	94991394	94991394	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	94991394	94991394	G	A	SNP	IARS	ENST00000375627	human	ensembl	58_37c	-1	known	missense	c.506	p.P169L	0.922	NULL	NULL	-	no_errors
IFIH1	0	genome.wustl.edu	37	2	163130328	163130328	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	163130328	163130328	T	C	SNP	IFIH1	NM_022168.2	human	genbank	58_37c	-1	reviewed	missense	c.2431	p.T811A	1.000	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_CARD,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_ResIII,superfamily_DEATH domain,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
IGHV1-3	0	genome.wustl.edu	37	14	106471515	106471515	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	14	106471515	106471515	C	A	SNP	IGHV1-3	ENST00000390595	human	ensembl	58_37c	-1	known	missense	c.82	p.A28S	0.001	HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	-	no_stop_codon
IGKV1D-16	0	genome.wustl.edu	37	2	90139529	90139529	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	90139529	90139529	G	A	SNP	IGKV1D-16	ENST00000492446	human	ensembl	58_37c	+1	known	silent	c.300	p.L100	0.041	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
IGLV1-51	0	genome.wustl.edu	37	22	22677326	22677327	+	Frame_Shift_Del	DEL	CA	CA	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	22677326	22677327	CA	-	DEL	IGLV1-51	ENST00000390290	human	ensembl	58_37c	+1	known	frame_shift_del	c.354_355	p.T119fs	0.993:1.000	HMMSmart_SM00409	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon:bad_bp_length_for_coding_region
IL15	0	genome.wustl.edu	37	4	142651103	142651103	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	142651103	142651103	T	A	SNP	IL15	NM_000585.3	human	genbank	58_37c	+1	reviewed	missense	c.344	p.I115N	0.899	HMMPfam_IL15	HMMPfam_IL15	-	no_errors
IL17RA	0	genome.wustl.edu	37	22	17583062	17583062	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	17583062	17583062	C	T	SNP	IL17RA	NM_014339.4	human	genbank	58_37c	+1	reviewed	missense	c.632	p.T211I	0.000	NULL	HMMPfam_SEFIR	-	no_errors
JAKMIP3	0	genome.wustl.edu	37	10	133946851	133946851	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	133946851	133946851	C	T	SNP	JAKMIP3	NM_001105521.2	human	genbank	58_37c	+1	provisional	silent	c.669	p.F223	1.000	NULL	NULL	-	no_errors
KBTBD12	0	genome.wustl.edu	37	3	127642256	127642257	+	Frame_Shift_Ins	INS	-	-	GT	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	127642256	127642257	-	GT	INS	KBTBD12	NM_207335.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.352_353	p.Q121fs	0.000:0.000	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,PatternScan_MGMT,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KCNH2	0	genome.wustl.edu	37	7	150654410	150654410	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	150654410	150654410	C	T	SNP	KCNH2	NM_000238.2	human	genbank	58_37c	-1	reviewed	missense	c.1097	p.R366Q	1.000	NULL	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMSmart_SM00086,HMMPfam_Ion_trans,HMMPfam_PAS,superfamily_cAMP-binding domain-like,superfamily_PYP-like sensor domain (PAS domain),superfamily_Voltage-gated potassium channels	-	no_errors
KCNK2	0	genome.wustl.edu	37	1	215342695	215342695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	215342695	215342695	C	T	SNP	KCNK2	NM_001017425.2	human	genbank	58_37c	+1	reviewed	missense	c.629	p.T210M	0.997	superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels	-	no_errors
KCNMB1	0	genome.wustl.edu	37	5	169805721	169805721	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	169805721	169805721	G	A	SNP	KCNMB1	NM_004137.2	human	genbank	58_37c	-1	reviewed	missense	c.563	p.A188V	0.980	HMMPfam_CaKB	HMMPfam_CaKB	-	no_errors
KIAA0664	0	genome.wustl.edu	37	17	2597292	2597292	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	2597292	2597292	T	C	SNP	KIAA0664	NM_015229.3	human	genbank	58_37c	-1	validated	missense	c.3016	p.N1006D	1.000	superfamily_SSF48452	superfamily_SSF103107,superfamily_SSF48452	-	no_errors
KIAA0776	0	genome.wustl.edu	37	6	97001369	97001369	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	97001369	97001369	C	T	SNP	KIAA0776	NM_015323.4	human	genbank	58_37c	+1	validated	missense	c.2375	p.T792M	1.000	NULL	HMMPfam_DUF2042	-	no_errors
KLF11	0	genome.wustl.edu	37	2	10188309	10188309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	10188309	10188309	C	T	SNP	KLF11	NM_003597.4	human	genbank	58_37c	+1	reviewed	missense	c.845	p.A282V	0.820	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
KLHL14	0	genome.wustl.edu	37	18	30267118	30267118	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	30267118	30267118	C	A	SNP	KLHL14	NM_020805.1	human	genbank	58_37c	-1	provisional	missense	c.1238	p.R413I	1.000	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central	HMMSmart_BTB,HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central,superfamily_BTB/POZ_fold,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KRT33B	0	genome.wustl.edu	37	17	39525757	39525757	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	39525757	39525757	C	T	SNP	KRT33B	NM_002279.3	human	genbank	58_37c	-1	reviewed	silent	c.246	p.A82	0.741	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
KRT40	0	genome.wustl.edu	37	17	39137136	39137136	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	39137136	39137136	C	T	SNP	KRT40	NM_182497.3	human	genbank	58_37c	-1	reviewed	silent	c.876	p.L292	0.054	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
KRT76	0	genome.wustl.edu	37	12	53162773	53162775	+	In_Frame_Del	DEL	ACT	ACT	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	ACT	ACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	53162773	53162775	ACT	-	DEL	KRT76	NM_015848.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1641_1639	p.S547in_frame_del	0.001:0.004:0.005	NULL	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP4-5	0	genome.wustl.edu	37	17	39305800	39305814	+	In_Frame_Del	DEL	TGGATTCACAGCAAT	TGGATTCACAGCAAT	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	TGGATTCACAGCAAT	TGGATTCACAGCAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	39305800	39305814	TGGATTCACAGCAAT	-	DEL	KRTAP4-5	NM_033188.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.220_206	p.YCCESS69in_frame_delC	0.689:0.524:0.472:0.042:0.004:0.003:0.006:0.126:0.849:0.943:0.982:0.981:0.896:0.000:0.000	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
LARP1	0	genome.wustl.edu	37	5	154170243	154170243	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	154170243	154170243	T	C	SNP	LARP1	NM_015315.3	human	genbank	58_37c	+1	validated	silent	c.306	p.P102	1.000	NULL	HMMSmart_DM15,HMMPfam_La,HMMSmart_LA,PatternScan_CYTOCHROME_B5_1,superfamily_SSF46785	-	no_errors
LDB2	0	genome.wustl.edu	37	4	16899985	16899985	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	16899985	16899985	G	A	SNP	LDB2	NM_001290.3	human	genbank	58_37c	-1	validated	missense	c.124	p.R42C	1.000	HMMPfam_LIM_bind	HMMPfam_LIM_bind	-	no_errors
LEPRE1	0	genome.wustl.edu	37	1	43215952	43215952	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	43215952	43215952	G	A	SNP	LEPRE1	NM_022356.3	human	genbank	58_37c	-1	reviewed	missense	c.1625	p.T542M	0.996	HMMSmart_SM00702	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702,superfamily_TPR-like	-	no_errors
LGI1	0	genome.wustl.edu	37	10	95557468	95557468	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	95557468	95557468	G	A	SNP	LGI1	NM_005097.2	human	genbank	58_37c	+1	reviewed	missense	c.1582	p.V528M	1.000	HMMPfam_EPTP	HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_EPTP,superfamily_L domain-like	-	no_errors
LIN54	0	genome.wustl.edu	37	4	83891570	83891570	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	83891570	83891570	T	C	SNP	LIN54	NM_194282.2	human	genbank	58_37c	-1	validated	missense	c.861	p.I287M	0.994	NULL	HMMPfam_CXC	-	no_errors
LOC100132247	0	genome.wustl.edu	37	16	22545718	22545718	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	22545718	22545718	C	T	SNP	LOC100132247	NM_001135865.1	human	genbank	58_37c	+1	validated	missense	c.1414	p.P472S	0.820	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
LOC100288128	0	genome.wustl.edu	37	11	6340459	6340459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	6340459	6340459	G	A	SNP	LOC100288128	XM_002343069.1	human	genbank	58_37c	+1	model	missense	c.322	p.G108S	0.049	NULL	NULL	-	no_errors
LOC100288331	0	genome.wustl.edu	37	15	84868453	84868453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	84868453	84868453	G	A	SNP	LOC100288331	XM_002343376.1	human	genbank	58_37c	+1	model	missense	c.88	p.A30T	0.999	HMMPfam_GED	HMMPfam_GED	-	no_errors
LOC100288332	0	genome.wustl.edu	37	16	15474824	15474824	+	Silent	SNP	G	G	A	rs1061049	byFrequency	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	15474824	15474824	G	A	SNP	LOC100288332	XM_002343424.1	human	genbank	58_37c	-1	model	silent	c.81	p.H27	0.935	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
LOC100289092	0	genome.wustl.edu	37	16	28884971	28884971	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	28884971	28884971	G	A	SNP	LOC100289092	XM_002343433.1	human	genbank	58_37c	-1	model	missense	c.380	p.T127M	1.000	NULL	NULL	-	no_errors
LOC346329	0	genome.wustl.edu	37	7	65970269	65970269	+	RNA	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	65970269	65970269	G	A	SNP	LOC346329	XR_016257.3	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.994	-	-	-	pseudogene
LOC643668	0	genome.wustl.edu	37	12	18846878	18846878	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	18846878	18846878	C	T	SNP	LOC643668	XR_016986.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC643677	0	genome.wustl.edu	37	13	103382857	103382857	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	103382857	103382857	T	C	SNP	LOC643677	XM_002344085.1	human	genbank	58_37c	-1	model	silent	c.19734	p.K6578	0.000	NULL	NULL	-	no_errors
LOC644548	0	genome.wustl.edu	37	4	63684107	63684107	+	RNA	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	63684107	63684107	T	C	SNP	LOC644548	XR_078302.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC644936	0	genome.wustl.edu	37	5	79595517	79595517	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	79595517	79595517	C	T	SNP	LOC644936	NR_004845.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC644950	0	genome.wustl.edu	37	3	109128578	109128581	+	Frame_Shift_Del	DEL	TAGT	TAGT	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	TAGT	TAGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	109128578	109128581	TAGT	-	DEL	LOC644950	XM_001717224.2	human	genbank	58_37c	-1	model	frame_shift_del	c.373_370	p.T124fs	1.000:1.000:1.000:1.000	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
LOC645752	0	genome.wustl.edu	37	15	78211297	78211297	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	78211297	78211297	C	T	SNP	LOC645752	NR_027024.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.990	-	-	-	pseudogene
LOC646936	0	genome.wustl.edu	37	2	49143663	49143663	+	RNA	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	49143663	49143663	G	A	SNP	LOC646936	XR_017488.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.958	-	-	-	pseudogene
LOC647020	0	genome.wustl.edu	37	15	81410320	81410320	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	81410320	81410320	A	G	SNP	LOC647020	XM_001719614.2	human	genbank	58_37c	-1	model	missense	c.476	p.L159P	1.000	superfamily_L domain-like	superfamily_L domain-like	-	no_errors
LOC653566	0	genome.wustl.edu	37	1	28422911	28422911	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	28422911	28422911	C	T	SNP	LOC653566	NR_027268.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.143	-	-	-	pseudogene
LOXL2	0	genome.wustl.edu	37	8	23198633	23198633	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	23198633	23198633	G	A	SNP	LOXL2	NM_002318.2	human	genbank	58_37c	-1	reviewed	silent	c.615	p.Y205	1.000	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SR,superfamily_Srcr_receptor	HMMPfam_SRCR,PatternScan_SRCR_1,HMMPfam_Lysyl_oxidase,HMMSmart_SR,superfamily_Srcr_receptor,PatternScan_LYSYL_OXIDASE	-	no_errors
LPA	0	genome.wustl.edu	37	6	161071369	161071369	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	161071369	161071369	C	T	SNP	LPA	NM_005577.2	human	genbank	58_37c	-1	reviewed	splice_site	c.209+1	e2+1	1.000	-	-	-	no_errors
LPIN2	0	genome.wustl.edu	37	18	2929124	2929124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	2929124	2929124	C	T	SNP	LPIN2	NM_014646.2	human	genbank	58_37c	-1	reviewed	missense	c.1489	p.E497K	1.000	NULL	HMMPfam_Lipin_N,HMMPfam_LNS2,HMMSmart_LNS2,superfamily_SSF56784	-	no_errors
LRP1B	0	genome.wustl.edu	37	2	141607771	141607771	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	141607771	141607771	G	A	SNP	LRP1B	NM_018557.2	human	genbank	58_37c	-1	validated	silent	c.4839	p.F1613	0.570	HMMSmart_LY,superfamily_SSF63825	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMPfam_NHL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
LRRN1	0	genome.wustl.edu	37	3	3886447	3886447	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	3886447	3886447	G	A	SNP	LRRN1	NM_020873.5	human	genbank	58_37c	+1	validated	missense	c.122	p.R41H	1.000	HMMSmart_LRRNT,superfamily_SSF52058	HMMSmart_LRRNT,HMMPfam_LRRCT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_IGc2,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
LSM5	0	genome.wustl.edu	37	7	32526764	32526764	+	RNA	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	32526764	32526764	C	T	SNP	LSM5	NR_024466.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	1.000	-	-	-	no_errors
LYZL1	0	genome.wustl.edu	37	10	29580826	29580826	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	29580826	29580826	T	C	SNP	LYZL1	NM_032517.4	human	genbank	58_37c	+1	validated	silent	c.168	p.I56	0.230	NULL	HMMPfam_Lys,HMMSmart_LYZ1,PatternScan_LACTALBUMIN_LYSOZYME_1,superfamily_SSF53955	-	no_errors
MAN2A2	0	genome.wustl.edu	37	15	91456857	91456857	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	91456857	91456857	G	A	SNP	MAN2A2	NM_006122.2	human	genbank	58_37c	+1	validated	missense	c.2732	p.R911Q	0.998	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C	HMMPfam_Glyco_hydro_38,superfamily_Gal_mut_like,superfamily_Glyco_hydro/deAcase_b/a-brl,HMMPfam_Glyco_hydro_38C,HMMPfam_Alpha-mann_mid,superfamily_SSF88688	-	no_errors
MANEAL	0	genome.wustl.edu	37	1	38265584	38265584	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	38265584	38265584	C	T	SNP	MANEAL	NM_001113482.1	human	genbank	58_37c	+1	validated	silent	c.1083	p.G361	1.000	NULL	NULL	-	no_errors
MAP1D	0	genome.wustl.edu	37	2	172930997	172930997	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	172930997	172930997	C	A	SNP	MAP1D	NM_199227.1	human	genbank	58_37c	+1	validated	missense	c.503	p.P168H	1.000	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core,PatternScan_MAP_1	-	no_errors
MASTL	0	genome.wustl.edu	37	10	27447506	27447506	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	27447506	27447506	A	G	SNP	MASTL	NM_032844.3	human	genbank	58_37c	+1	reviewed	missense	c.215	p.K72R	1.000	superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Pkinase	-	no_errors
MBD4	0	genome.wustl.edu	37	3	129158619	129158619	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	129158619	129158619	C	T	SNP	MBD4	NM_003925.1	human	genbank	58_37c	-1	reviewed	missense	c.58	p.V20I	0.000	NULL	HMMPfam_MBD,HMMSmart_SM00391,HMMPfam_HhH-GPD,superfamily_DNA-glycosylase,superfamily_DNA-binding domain	-	no_errors
MBOAT1	0	genome.wustl.edu	37	6	20152948	20152948	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	20152948	20152948	C	T	SNP	MBOAT1	NM_001080480.1	human	genbank	58_37c	-1	provisional	missense	c.152	p.R51H	1.000	NULL	HMMPfam_MBOAT	-	no_errors
MBTPS1	0	genome.wustl.edu	37	16	84088175	84088175	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	84088175	84088175	A	G	SNP	MBTPS1	NM_003791.2	human	genbank	58_37c	-1	reviewed	missense	c.3038	p.V1013A	1.000	NULL	HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Pept_S8_S53	-	no_errors
MDN1	0	genome.wustl.edu	37	6	90461233	90461233	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	90461233	90461233	C	A	SNP	MDN1	NM_014611.1	human	genbank	58_37c	-1	provisional	missense	c.3144	p.K1048N	0.984	NULL	HMMSmart_SM00327,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_vWA-like	-	no_errors
MED12	0	genome.wustl.edu	37	X	70357623	70357623	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	70357623	70357623	C	T	SNP	MED12	ENST00000444034	human	ensembl	58_37c	+1	known	missense	c.536	p.A179V	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
MED12L	0	genome.wustl.edu	37	3	151095876	151095876	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	151095876	151095876	C	T	SNP	MED12L	NM_053002.4	human	genbank	58_37c	+1	reviewed	silent	c.4288	p.L1430	0.415	NULL	HMMPfam_Med12	-	no_errors
MED12L	0	genome.wustl.edu	37	3	151100490	151100490	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	151100490	151100490	C	T	SNP	MED12L	NM_053002.4	human	genbank	58_37c	+1	reviewed	missense	c.4532	p.A1511V	1.000	NULL	HMMPfam_Med12	-	no_errors
MEF2D	0	genome.wustl.edu	37	1	156446980	156446980	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	156446980	156446980	T	C	SNP	MEF2D	NM_005920.2	human	genbank	58_37c	-1	provisional	missense	c.679	p.S227G	1.000	NULL	HMMPfam_SRF-TF,HMMSmart_SM00432,PatternScan_MADS_BOX_1,superfamily_SRF-like	-	no_errors
MEGF8	0	genome.wustl.edu	37	19	42853706	42853706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	42853706	42853706	G	A	SNP	MEGF8	NM_001410.2	human	genbank	58_37c	+1	validated	missense	c.2153	p.R718H	0.996	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_CUB,HMMSmart_CUB,superfamily_CUB,HMMSmart_EGF_CA,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_PSI,HMMSmart_PSI,HMMSmart_EGF,HMMPfam_Kelch_1,superfamily_Gal_oxid_central,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF57196	-	no_errors
MIPEP	0	genome.wustl.edu	37	13	24460601	24460601	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	24460601	24460601	A	G	SNP	MIPEP	NM_005932.2	human	genbank	58_37c	-1	reviewed	silent	c.234	p.H78	0.000	superfamily_SSF55486	HMMPfam_Peptidase_M3,PatternScan_ZINC_PROTEASE,superfamily_SSF55486	-	no_errors
MNS1	0	genome.wustl.edu	37	15	56723678	56723678	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	56723678	56723678	A	G	SNP	MNS1	NM_018365.2	human	genbank	58_37c	-1	reviewed	missense	c.1288	p.W430R	0.979	NULL	NULL	-	no_errors
MOCS2	0	genome.wustl.edu	37	5	52402960	52402960	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	52402960	52402960	C	T	SNP	MOCS2	NM_176806.2	human	genbank	58_37c	-1	reviewed	missense	c.232	p.E78K	0.998	HMMPfam_ThiS,superfamily_Mo_synth/thiamin_syn_S_b-grasp	HMMPfam_ThiS,superfamily_Mo_synth/thiamin_syn_S_b-grasp	-	no_errors
MOV10L1	0	genome.wustl.edu	37	22	50584153	50584153	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	50584153	50584153	C	T	SNP	MOV10L1	NM_018995.2	human	genbank	58_37c	+1	reviewed	silent	c.2541	p.D847	0.077	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MPP1	0	genome.wustl.edu	37	X	154007615	154007615	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	154007615	154007615	T	C	SNP	MPP1	NM_002436.3	human	genbank	58_37c	-1	reviewed	missense	c.1238	p.Q413R	1.000	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,HMMPfam_SH3_2,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MTMR12	0	genome.wustl.edu	37	5	32230235	32230235	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	32230235	32230235	G	A	SNP	MTMR12	NM_001040446.1	human	genbank	58_37c	-1	reviewed	silent	c.1893	p.I631	0.033	superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Myotub-related,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
MTUS2	0	genome.wustl.edu	37	13	29600608	29600608	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	29600608	29600608	C	T	SNP	MTUS2	NM_001033602.2	human	genbank	58_37c	+1	validated	silent	c.1803	p.N601	0.014	NULL	NULL	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100647332	100647333	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	100647332	100647333	-	A	INS	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	frame_shift_ins	c.13917_13918	p.Q4639fs	0.426:0.340	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
MUC5B	0	genome.wustl.edu	37	11	1265872	1265872	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	1265872	1265872	G	A	SNP	MUC5B	NM_002458.1	human	genbank	58_37c	+1	validated	missense	c.7771	p.G2591R	0.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
MUDENG	0	genome.wustl.edu	37	14	57749707	57749707	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	14	57749707	57749707	C	T	SNP	MUDENG	NM_018229.3	human	genbank	58_37c	+1	validated	nonsense	c.1144	p.R382*	1.000	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	-	no_errors
MYCBP2	0	genome.wustl.edu	37	13	77669522	77669522	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	77669522	77669522	C	T	SNP	MYCBP2	NM_015057.4	human	genbank	58_37c	-1	validated	missense	c.10056	p.M3352I	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMSmart_SM00184,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_PHR,superfamily_E set domains,superfamily_RING/U-box	-	no_errors
MYF6	0	genome.wustl.edu	37	12	81102372	81102372	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	81102372	81102372	C	T	SNP	MYF6	NM_002469.2	human	genbank	58_37c	+1	reviewed	missense	c.589	p.L197F	1.000	NULL	HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_Basic,HMMSmart_SM00520,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
MYH3	0	genome.wustl.edu	37	17	10549037	10549037	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	10549037	10549037	C	T	SNP	MYH3	NM_002470.2	human	genbank	58_37c	-1	reviewed	silent	c.1128	p.P376	0.001	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
MYO9A	0	genome.wustl.edu	37	15	72119094	72119094	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	72119094	72119094	T	C	SNP	MYO9A	NM_006901.2	human	genbank	58_37c	-1	validated	missense	c.7474	p.T2492A	1.000	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_GTPase activation domain GAP,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Cysteine-rich domain	-	no_errors
N4BP2	0	genome.wustl.edu	37	4	40123163	40123163	+	Missense_Mutation	SNP	G	G	A	rs143339561	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	40123163	40123163	G	A	SNP	N4BP2	ENST00000513269	human	ensembl	58_37c	+1	known	missense	c.2371	p.V791M	0.015	NULL	HMMPfam_Smr,HMMSmart_SM00463,HMMPfam_DUF1771,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
NCOA2	0	genome.wustl.edu	37	8	71126143	71126143	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	71126143	71126143	T	A	SNP	NCOA2	NM_006540.2	human	genbank	58_37c	-1	validated	missense	c.254	p.E85V	1.000	HMMSmart_HLH,superfamily_HLH_basic	HMMSmart_PAS,HMMSmart_HLH,HMMSmart_PAC,superfamily_Nuc_recept_coact,HMMPfam_DUF1518,superfamily_HLH_basic,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_SSF55785	-	no_errors
NCOR1	0	genome.wustl.edu	37	17	15995175	15995175	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	15995175	15995175	A	G	SNP	NCOR1	NM_006311.2	human	genbank	58_37c	-1	reviewed	splice_site	c.3016+2	e21+2	1.000	-	-	-	no_errors
NEBL	0	genome.wustl.edu	37	10	21097452	21097452	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	21097452	21097452	C	T	SNP	NEBL	NM_006393.2	human	genbank	58_37c	-1	reviewed	silent	c.2748	p.P916	0.649	NULL	HMMPfam_Nebulin,HMMSmart_SM00227,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	-	no_errors
NEK9	0	genome.wustl.edu	37	14	75572697	75572697	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	14	75572697	75572697	G	A	SNP	NEK9	NM_033116.4	human	genbank	58_37c	-1	validated	nonsense	c.1531	p.R511*	1.000	HMMPfam_RCC1,superfamily_RCC1/BLIP-II	HMMPfam_RCC1,PatternScan_RCC1_1,PatternScan_RCC1_2,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_RCC1/BLIP-II,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NFE2L3	0	genome.wustl.edu	37	7	26225088	26225088	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	26225088	26225088	T	C	SNP	NFE2L3	NM_004289.6	human	genbank	58_37c	+1	reviewed	silent	c.1770	p.V590	0.955	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1	-	no_errors
NFRKB	0	genome.wustl.edu	37	11	129739508	129739508	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	129739508	129739508	C	T	SNP	NFRKB	NM_006165.3	human	genbank	58_37c	-1	validated	missense	c.3487	p.V1163M	0.985	NULL	NULL	-	no_errors
NFX1	0	genome.wustl.edu	37	9	33294960	33294960	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	33294960	33294960	T	C	SNP	NFX1	NM_002504.3	human	genbank	58_37c	+1	reviewed	missense	c.568	p.C190R	0.604	NULL	HMMPfam_zf-NF-X1,HMMSmart_SM00438,HMMPfam_R3H,HMMSmart_SM00393,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_PHD_1,superfamily_RING/U-box,superfamily_R3H domain	-	no_errors
NIPBL	0	genome.wustl.edu	37	5	36985782	36985782	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	36985782	36985782	C	T	SNP	NIPBL	NM_133433.3	human	genbank	58_37c	+1	reviewed	nonsense	c.2500	p.R834*	0.999	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
NKAPL	0	genome.wustl.edu	37	6	28227370	28227370	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	28227370	28227370	G	A	SNP	NKAPL	NM_001007531.1	human	genbank	58_37c	+1	provisional	missense	c.221	p.R74Q	0.000	NULL	HMMPfam_DUF926	-	no_errors
NOS1	0	genome.wustl.edu	37	12	117680511	117680511	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	117680511	117680511	C	T	SNP	NOS1	NM_000620.2	human	genbank	58_37c	-1	reviewed	splice_site	c.2963-1	e19-1	1.000	-	-	-	no_errors
NPHP4	0	genome.wustl.edu	37	1	5925191	5925191	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	5925191	5925191	C	T	SNP	NPHP4	NM_015102.2	human	genbank	58_37c	-1	reviewed	missense	c.3787	p.A1263T	0.994	NULL	NULL	-	no_errors
NR1H2	0	genome.wustl.edu	37	19	50881822	50881823	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	50881822	50881823	-	CAG	INS	NR1H2	NM_007121.4	human	genbank	58_37c	+1	validated	in_frame_ins	c.516_517	p.175in_frame_insQ	0.999:1.000	superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
NRG3	0	genome.wustl.edu	37	10	83637750	83637750	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	83637750	83637750	G	A	SNP	NRG3	ENST00000404576	human	ensembl	58_37c	+1	known	missense	c.34	p.V12I	0.035	NULL	HMMPfam_Neuregulin,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
NXT2	0	genome.wustl.edu	37	X	108780219	108780219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	108780219	108780219	C	T	SNP	NXT2	NM_018698.3	human	genbank	58_37c	+1	provisional	missense	c.149	p.T50I	0.000	NULL	HMMPfam_NTF2,superfamily_SSF54427	-	no_errors
OBSCN	0	genome.wustl.edu	37	1	228481236	228481236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	228481236	228481236	C	T	SNP	OBSCN	NM_001098623.1	human	genbank	58_37c	+1	reviewed	missense	c.11050	p.R3684C	0.238	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
OCM2	0	genome.wustl.edu	37	7	97616394	97616394	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	97616394	97616394	G	A	SNP	OCM2	NM_006188.3	human	genbank	58_37c	-1	reviewed	missense	c.269	p.A90V	0.234	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
ODF1	0	genome.wustl.edu	37	8	103572819	103572819	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	103572819	103572819	C	T	SNP	ODF1	NM_024410.3	human	genbank	58_37c	+1	reviewed	missense	c.460	p.R154W	1.000	superfamily_HSP20_chap	superfamily_HSP20_chap	-	no_errors
ODZ3	0	genome.wustl.edu	37	4	183676017	183676017	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	183676017	183676017	A	G	SNP	ODZ3	NM_001080477.1	human	genbank	58_37c	+1	provisional	silent	c.4497	p.S1499	0.007	superfamily_ConA_like_lec_gl,superfamily_SSF101898,superfamily_SSF63829	HMMPfam_NHL,HMMSmart_EGF,HMMPfam_RHS_repeat,superfamily_CarboxypepD_reg,superfamily_ConA_like_lec_gl,HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_SSF57196,superfamily_SSF63829	-	no_errors
OPHN1	0	genome.wustl.edu	37	X	67273542	67273542	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	67273542	67273542	G	T	SNP	OPHN1	NM_002547.2	human	genbank	58_37c	-1	reviewed	missense	c.2269	p.P757T	0.974	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_PH,HMMSmart_PH,superfamily_Rho_GAP,superfamily_SSF50729	-	no_errors
OPRM1	0	genome.wustl.edu	37	6	154412166	154412166	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	154412166	154412166	C	T	SNP	OPRM1	NM_001145279.1	human	genbank	58_37c	+1	reviewed	silent	c.1002	p.F334	0.973	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR10AG1	0	genome.wustl.edu	37	11	55735641	55735641	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	55735641	55735641	C	T	SNP	OR10AG1	NM_001005491.1	human	genbank	58_37c	-1	provisional	missense	c.299	p.G100D	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR2T11	0	genome.wustl.edu	37	1	248790131	248790131	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	248790131	248790131	A	G	SNP	OR2T11	NM_001001964.1	human	genbank	58_37c	-1	provisional	missense	c.299	p.L100P	0.015	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4X1	0	genome.wustl.edu	37	11	48285598	48285598	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	48285598	48285598	C	A	SNP	OR4X1	NM_001004726.1	human	genbank	58_37c	+1	provisional	missense	c.186	p.S62R	0.996	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR6X1	0	genome.wustl.edu	37	11	123624868	123624868	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	123624868	123624868	C	T	SNP	OR6X1	NM_001005188.1	human	genbank	58_37c	-1	provisional	missense	c.359	p.R120H	1.000	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
ORMDL1	0	genome.wustl.edu	37	2	190647159	190647159	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	190647159	190647159	T	C	SNP	ORMDL1	NM_001128150.1	human	genbank	58_37c	-1	validated	missense	c.163	p.I55V	1.000	HMMPfam_ORMDL	HMMPfam_ORMDL	-	no_errors
OSMR	0	genome.wustl.edu	37	5	38886285	38886285	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	38886285	38886285	T	C	SNP	OSMR	NM_003999.2	human	genbank	58_37c	+1	reviewed	silent	c.984	p.T328	0.214	NULL	PatternScan_HEMATOPO_REC_L_F2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
PCDHB18	0	genome.wustl.edu	37	5	140615597	140615597	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	140615597	140615597	C	T	SNP	PCDHB18	ENST00000274705	human	ensembl	58_37c	+1	known	silent	c.1312	p.L438	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCDHB2	0	genome.wustl.edu	37	5	140475245	140475245	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	140475245	140475245	C	T	SNP	PCDHB2	NM_018936.2	human	genbank	58_37c	+1	reviewed	missense	c.871	p.R291C	0.989	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCDHGA9	0	genome.wustl.edu	37	5	140783157	140783157	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	140783157	140783157	C	T	SNP	PCDHGA9	NM_018921.2	human	genbank	58_37c	+1	reviewed	missense	c.638	p.T213M	0.962	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHGB2	0	genome.wustl.edu	37	5	140741848	140741848	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	140741848	140741848	C	T	SNP	PCDHGB2	NM_018923.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2146	p.R716*	0.005	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHGC5	0	genome.wustl.edu	37	5	140869817	140869817	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	140869817	140869817	A	G	SNP	PCDHGC5	NM_018929.2	human	genbank	58_37c	+1	reviewed	missense	c.1010	p.Q337R	0.735	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCLO	0	genome.wustl.edu	37	7	82763887	82763887	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	82763887	82763887	A	C	SNP	PCLO	NM_033026.5	human	genbank	58_37c	-1	validated	missense	c.2979	p.S993R	0.000	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_zf-piccolo,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_FYVE/PHD zinc finger	-	no_errors
PCNT	0	genome.wustl.edu	37	21	47863767	47863768	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	21	47863767	47863768	-	C	INS	PCNT	NM_006031.5	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.9745_9746	p.T3252fs	0.021:0.023	NULL	HMMPfam_PACT_coil_coil	-	no_errors
PDZK1IP1	0	genome.wustl.edu	37	1	47650716	47650716	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	47650716	47650716	A	G	SNP	PDZK1IP1	NM_005764.3	human	genbank	58_37c	-1	validated	missense	c.230	p.V77A	0.155	NULL	NULL	-	no_errors
PGM5	0	genome.wustl.edu	37	9	71144508	71144508	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	71144508	71144508	T	C	SNP	PGM5	NM_021965.3	human	genbank	58_37c	+1	validated	missense	c.1640	p.I547T	0.997	HMMPfam_PGM_PMM_IV,superfamily_Phosphoglucomutase C-terminal domain	HMMPfam_PGM_PMM_IV,HMMPfam_PGM_PMM_I,HMMPfam_PGM_PMM_II,HMMPfam_PGM_PMM_III,superfamily_Phosphoglucomutase first 3 domains,PatternScan_PGM_PMM,PatternScan_TRYPSIN_HIS,superfamily_Phosphoglucomutase C-terminal domain	-	no_errors
PHF12	0	genome.wustl.edu	37	17	27239621	27239621	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	27239621	27239621	A	T	SNP	PHF12	NM_001033561.1	human	genbank	58_37c	-1	validated	missense	c.1968	p.D656E	0.987	NULL	HMMSmart_SM00249,superfamily_SMAD/FHA domain,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
PIGG	0	genome.wustl.edu	37	4	515734	515734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	515734	515734	C	T	SNP	PIGG	ENST00000509768	human	ensembl	58_37c	+1	known	missense	c.1351	p.R451C	0.489	NULL	superfamily_Alkaline phosphatase-like	-	no_errors
PIGS	0	genome.wustl.edu	37	17	26881988	26881988	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	26881988	26881988	G	A	SNP	PIGS	NM_033198.3	human	genbank	58_37c	-1	reviewed	missense	c.1273	p.R425W	1.000	HMMPfam_PIG-S	HMMPfam_PIG-S	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178938775	178938775	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	178938775	178938775	T	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.2017	p.S673T	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PION	0	genome.wustl.edu	37	7	76984734	76984734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	76984734	76984734	C	T	SNP	PION	NM_017439.3	human	genbank	58_37c	-1	validated	missense	c.1134	p.M378I	0.000	NULL	NULL	-	no_errors
PITPNM2	0	genome.wustl.edu	37	12	123519107	123519107	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	123519107	123519107	G	A	SNP	PITPNM2	NM_020845.2	human	genbank	58_37c	-1	validated	missense	c.31	p.P11S	1.000	HMMPfam_IP_trans,superfamily_Bet v1-like	HMMPfam_IP_trans,HMMPfam_DDHD,HMMPfam_LNS2,HMMSmart_SM00775,superfamily_Bet v1-like,superfamily_HAD-like	-	no_errors
PKHD1L1	0	genome.wustl.edu	37	8	110424608	110424608	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	110424608	110424608	C	T	SNP	PKHD1L1	NM_177531.4	human	genbank	58_37c	+1	validated	missense	c.2200	p.P734S	0.977	NULL	HMMPfam_TIG,HMMSmart_SM00429,HMMSmart_SM00710,superfamily_Cupredoxins,superfamily_Pectin lyase-like,HMMSmart_SM00758,superfamily_E set domains,HMMPfam_G8,superfamily_Anthrax protective antigen	-	no_errors
PLBD2	0	genome.wustl.edu	37	12	113826338	113826338	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	113826338	113826338	G	A	SNP	PLBD2	NM_173542.3	human	genbank	58_37c	+1	validated	silent	c.1677	p.P559	0.258	HMMPfam_Phospholip_B	HMMPfam_Phospholip_B	-	no_errors
PLOD1	0	genome.wustl.edu	37	1	12030842	12030842	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	12030842	12030842	C	T	SNP	PLOD1	NM_000302.2	human	genbank	58_37c	+1	reviewed	missense	c.1871	p.T624M	1.000	HMMSmart_P4Hc	PatternScan_LYS_HYDROXYLASE,HMMPfam_2OG-FeII_Oxy,HMMSmart_P4Hc	-	no_errors
PNPLA7	0	genome.wustl.edu	37	9	140361796	140361796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	140361796	140361796	C	T	SNP	PNPLA7	NM_001098537.1	human	genbank	58_37c	-1	validated	missense	c.3012	p.M1004I	0.982	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like	HMMPfam_cNMP_binding,HMMSmart_SM00100,HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like,superfamily_cAMP-binding domain-like	-	no_errors
PPARG	0	genome.wustl.edu	37	3	12421355	12421355	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	12421355	12421355	G	A	SNP	PPARG	NM_015869.4	human	genbank	58_37c	+1	reviewed	missense	c.235	p.E79K	1.000	NULL	HMMPfam_Hormone_recep,HMMSmart_SM00430,HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
PPAT	0	genome.wustl.edu	37	4	57268337	57268337	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	57268337	57268337	T	C	SNP	PPAT	NM_002703.3	human	genbank	58_37c	-1	reviewed	silent	c.672	p.T224	0.001	HMMPfam_GATase_2,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	HMMPfam_GATase_2,HMMPfam_Pribosyltran,superfamily_PRTase-like,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
PPFIA3	0	genome.wustl.edu	37	19	49651945	49651945	+	Missense_Mutation	SNP	A	A	G	rs145480643	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	49651945	49651945	A	G	SNP	PPFIA3	NM_003660.2	human	genbank	58_37c	+1	reviewed	missense	c.3034	p.M1012V	1.000	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2	-	no_errors
PPP3CA	0	genome.wustl.edu	37	4	102004357	102004357	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	102004357	102004357	T	G	SNP	PPP3CA	NM_000944.4	human	genbank	58_37c	-1	validated	missense	c.846	p.E282D	1.000	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases	HMMPfam_Metallophos,HMMSmart_SM00156,PatternScan_SER_THR_PHOSPHATASE,superfamily_Metallo-dependent phosphatases	-	no_errors
PRB3	0	genome.wustl.edu	37	12	11420563	11420563	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	11420563	11420563	G	T	SNP	PRB3	ENST00000279573	human	ensembl	58_37c	-1	known	missense	c.620	p.P207Q	0.003	NULL	NULL	-	no_errors
PWP1	0	genome.wustl.edu	37	12	108090359	108090359	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	108090359	108090359	C	T	SNP	PWP1	NM_007062.1	human	genbank	58_37c	+1	provisional	missense	c.611	p.T204I	0.564	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
RAB37	0	genome.wustl.edu	37	17	72740525	72740525	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	72740525	72740525	G	T	SNP	RAB37	ENST00000392617	human	ensembl	58_37c	+1	known	missense	c.424	p.G142W	0.001	HMMSmart_RAB	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540	-	no_errors
RAE1	0	genome.wustl.edu	37	20	55940493	55940493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	20	55940493	55940493	G	A	SNP	RAE1	NM_001015885.1	human	genbank	58_37c	+1	reviewed	missense	c.370	p.A124T	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
RBM33	0	genome.wustl.edu	37	7	155567691	155567691	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	155567691	155567691	A	G	SNP	RBM33	NM_053043.2	human	genbank	58_37c	+1	validated	missense	c.3469	p.M1157V	1.000	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RBMXL1	0	genome.wustl.edu	37	1	89448795	89448795	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	89448795	89448795	G	A	SNP	RBMXL1	ENST00000321792	human	ensembl	58_37c	-1	known	nonsense	c.715	p.R239*	0.993	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_RBM1CTR,superfamily_SSF54928	-	no_errors
RBMXL3	0	genome.wustl.edu	37	X	114425534	114425534	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	114425534	114425534	T	C	SNP	RBMXL3	NM_001145346.1	human	genbank	58_37c	+1	validated	silent	c.1530	p.Y510	0.030	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
REM1	0	genome.wustl.edu	37	20	30064292	30064292	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	20	30064292	30064292	G	A	SNP	REM1	NM_014012.4	human	genbank	58_37c	+1	reviewed	missense	c.44	p.R15Q	0.496	NULL	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RFESD	0	genome.wustl.edu	37	5	94991896	94991896	+	Silent	SNP	T	T	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	94991896	94991896	T	A	SNP	RFESD	NM_001131065.1	human	genbank	58_37c	+1	validated	silent	c.516	p.I172	1.000	superfamily_ISP domain	HMMPfam_Rieske,superfamily_ISP domain	-	no_errors
RFX7	0	genome.wustl.edu	37	15	56388765	56388765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	56388765	56388765	G	A	SNP	RFX7	NM_022841.5	human	genbank	58_37c	-1	validated	silent	c.1161	p.D387	0.710	NULL	"HMMPfam_RFX_DNA_binding,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
RGAG4	0	genome.wustl.edu	37	X	71350651	71350651	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	71350651	71350651	C	T	SNP	RGAG4	NM_001024455.3	human	genbank	58_37c	-1	validated	missense	c.740	p.G247D	0.896	HMMPfam_Retrotrans_gag	HMMPfam_Retrotrans_gag	-	no_errors
RGNEF	0	genome.wustl.edu	37	5	73200210	73200210	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	73200210	73200210	C	A	SNP	RGNEF	NM_001080479.2	human	genbank	58_37c	+1	reviewed	missense	c.4141	p.R1381S	0.994	NULL	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
RMND1	0	genome.wustl.edu	37	6	151766618	151766618	+	Missense_Mutation	SNP	T	T	G	rs138900217	byFrequency	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	151766618	151766618	T	G	SNP	RMND1	NM_017909.2	human	genbank	58_37c	-1	validated	missense	c.329	p.K110T	0.113	NULL	HMMPfam_DUF155	-	no_errors
RNF14	0	genome.wustl.edu	37	5	141359789	141359789	+	Silent	SNP	G	G	A	rs141694109	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	141359789	141359789	G	A	SNP	RNF14	NM_004290.3	human	genbank	58_37c	+1	reviewed	silent	c.936	p.P312	0.231	HMMPfam_IBR,HMMSmart_SM00647,superfamily_RING/U-box	HMMPfam_IBR,HMMSmart_SM00647,PatternScan_2FE2S_FER_1,HMMPfam_RWD,HMMSmart_SM00591,superfamily_UBC-like,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
RNF34	0	genome.wustl.edu	37	12	121853973	121853973	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	121853973	121853973	G	A	SNP	RNF34	NM_194271.1	human	genbank	58_37c	+1	reviewed	silent	c.21	p.T7	0.007	NULL	HMMSmart_SM00184,superfamily_FYVE/PHD zinc finger,superfamily_RING/U-box	-	no_errors
RNH1	0	genome.wustl.edu	37	11	502136	502136	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	502136	502136	G	A	SNP	RNH1	NM_002939.3	human	genbank	58_37c	-1	validated	silent	c.27	p.D9	0.797	superfamily_SSF52047	HMMPfam_LRR_1,HMMSmart_LRR_RI,superfamily_SSF52047	-	no_errors
ROCK1	0	genome.wustl.edu	37	18	18539823	18539823	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	18539823	18539823	G	A	SNP	ROCK1	NM_005406.2	human	genbank	58_37c	-1	reviewed	missense	c.3490	p.P1164S	1.000	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	HMMPfam_HR1,HMMSmart_S_TK_X,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Rho_Binding,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
RPGRIP1L	0	genome.wustl.edu	37	16	53706790	53706792	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	53706790	53706792	TTC	-	DEL	RPGRIP1L	NM_015272.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1021_1019	p.R340in_frame_del	0.912:0.872:0.870	NULL	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
RPS6KA3	0	genome.wustl.edu	37	X	20213261	20213261	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	20213261	20213261	G	A	SNP	RPS6KA3	NM_004586.2	human	genbank	58_37c	-1	reviewed	nonsense	c.328	p.R110*	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
RUFY1	0	genome.wustl.edu	37	5	179028899	179028899	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	179028899	179028899	C	T	SNP	RUFY1	NM_025158.3	human	genbank	58_37c	+1	validated	missense	c.1768	p.R590W	0.991	NULL	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_RUN,HMMSmart_SM00593,superfamily_FYVE/PHD zinc finger	-	no_errors
RUNX2	0	genome.wustl.edu	37	6	45399682	45399682	+	Missense_Mutation	SNP	G	G	A	rs104893995	byCluster	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	45399682	45399682	G	A	SNP	RUNX2	NM_001024630.3	human	genbank	58_37c	+1	reviewed	missense	c.710	p.R237Q	1.000	superfamily_P53_like_DNA_bnd,HMMPfam_Runt	superfamily_P53_like_DNA_bnd,HMMPfam_Runt,HMMPfam_RunxI	-	no_errors
RYR1	0	genome.wustl.edu	37	19	38987176	38987176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	38987176	38987176	G	A	SNP	RYR1	NM_000540.2	human	genbank	58_37c	+1	reviewed	missense	c.6791	p.G2264D	1.000	HMMPfam_RYDR_ITPR	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
RYR3	0	genome.wustl.edu	37	15	34049768	34049768	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	34049768	34049768	C	A	SNP	RYR3	NM_001036.3	human	genbank	58_37c	+1	validated	silent	c.8676	p.A2892	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_efhand,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
RYR3	0	genome.wustl.edu	37	15	34156378	34156378	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	34156378	34156378	G	A	SNP	RYR3	NM_001036.3	human	genbank	58_37c	+1	validated	silent	c.14505	p.E4835	0.897	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_efhand,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SAE1	0	genome.wustl.edu	37	19	47653513	47653513	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	47653513	47653513	C	T	SNP	SAE1	ENST00000270225	human	ensembl	58_37c	+1	known	nonsense	c.265	p.R89*	1.000	HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins	HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins	-	no_errors
SAMM50	0	genome.wustl.edu	37	22	44385035	44385035	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	44385035	44385035	C	A	SNP	SAMM50	NM_015380.4	human	genbank	58_37c	+1	validated	missense	c.1120	p.L374I	1.000	HMMPfam_Bac_surface_Ag	HMMPfam_Bac_surface_Ag	-	no_errors
SCN4A	0	genome.wustl.edu	37	17	62019291	62019291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	62019291	62019291	G	A	SNP	SCN4A	NM_000334.4	human	genbank	58_37c	-1	reviewed	missense	c.4351	p.R1451C	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SEC14L5	0	genome.wustl.edu	37	16	5046950	5046950	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	5046950	5046950	G	A	SNP	SEC14L5	NM_014692.1	human	genbank	58_37c	+1	validated	missense	c.875	p.R292H	1.000	HMMPfam_CRAL_TRIO_N,superfamily_Sec14p_like_N	HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C,HMMPfam_PRELI,HMMPfam_CRAL_TRIO_N,superfamily_Sec14p_like_N,superfamily_SSF101576	-	no_errors
SEC24C	0	genome.wustl.edu	37	10	75510956	75510956	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	75510956	75510956	A	G	SNP	SEC24C	NM_004922.2	human	genbank	58_37c	+1	reviewed	missense	c.263	p.Q88R	1.000	NULL	HMMPfam_zf-Sec23_Sec24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_Sec23_trunk,HMMPfam_Sec23_helical,superfamily_Helical domain of Sec23/24,HMMPfam_Gelsolin,HMMPfam_Sec23_BS,PatternScan_GLYCOSYL_HYDROL_F1_1,superfamily_vWA-like,superfamily_beta-sandwich domain of Sec23/24,superfamily_C-terminal gelsolin-like domain of Sec23/24	-	no_errors
SETBP1	0	genome.wustl.edu	37	18	42532994	42532994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	42532994	42532994	C	T	SNP	SETBP1	NM_015559.2	human	genbank	58_37c	+1	validated	missense	c.3689	p.T1230I	1.000	NULL	HMMPfam_AT_hook,HMMSmart_SM00384	-	no_errors
SETDB2	0	genome.wustl.edu	37	13	50050946	50050946	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	50050946	50050946	A	G	SNP	SETDB2	NM_031915.2	human	genbank	58_37c	+1	validated	missense	c.676	p.T226A	1.000	HMMPfam_MBD,HMMSmart_SM00391,superfamily_DNA-binding domain	HMMPfam_SET,HMMSmart_SM00317,HMMPfam_MBD,HMMSmart_SM00391,HMMSmart_SM00468,HMMPfam_Pre-SET,superfamily_DNA-binding domain,superfamily_SET domain	-	no_errors
SFN	0	genome.wustl.edu	37	1	27189737	27189737	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	27189737	27189737	C	T	SNP	SFN	NM_006142.3	human	genbank	58_37c	+1	validated	silent	c.34	p.L12	0.985	HMMPfam_14-3-3,HMMSmart_SM00101,superfamily_14-3-3 protein	HMMPfam_14-3-3,HMMSmart_SM00101,PatternScan_1433_1,PatternScan_1433_2,superfamily_14-3-3 protein	-	no_errors
SFRS2IP	0	genome.wustl.edu	37	12	46320516	46320517	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	46320516	46320517	-	T	INS	SFRS2IP	NM_004719.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2968_2967	p.E989fs	0.998:0.794	NULL	HMMSmart_SM00184,PatternScan_ZF_RING_1,superfamily_RING/U-box	-	no_errors
SFXN3	0	genome.wustl.edu	37	10	102795363	102795363	+	Missense_Mutation	SNP	C	C	T	rs138356625	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	102795363	102795363	C	T	SNP	SFXN3	NM_030971.3	human	genbank	58_37c	+1	validated	missense	c.283	p.R95C	1.000	HMMPfam_Mtc	HMMPfam_Mtc	-	no_errors
SHISA3	0	genome.wustl.edu	37	4	42403144	42403144	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	42403144	42403144	G	A	SNP	SHISA3	NM_001080505.1	human	genbank	58_37c	+1	provisional	silent	c.393	p.Q131	1.000	NULL	NULL	-	no_errors
SIK3	0	genome.wustl.edu	37	11	116734457	116734457	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	116734457	116734457	G	A	SNP	SIK3	NM_025164.3	human	genbank	58_37c	-1	validated	missense	c.1712	p.A571V	1.000	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
SIRT3	0	genome.wustl.edu	37	11	233199	233199	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	233199	233199	G	T	SNP	SIRT3	NM_012239.5	human	genbank	58_37c	-1	validated	missense	c.490	p.L164M	0.936	HMMPfam_SIR2,superfamily_SSF52467	HMMPfam_SIR2,superfamily_SSF52467	-	no_errors
SKIV2L2	0	genome.wustl.edu	37	5	54624574	54624574	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	54624574	54624574	T	C	SNP	SKIV2L2	ENST00000506750	human	ensembl	58_37c	+1	known	missense	c.245	p.V82A	1.000	NULL	NULL	-	no_errors
SLC25A18	0	genome.wustl.edu	37	22	18070764	18070764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	18070764	18070764	G	A	SNP	SLC25A18	NM_031481.1	human	genbank	58_37c	+1	provisional	missense	c.649	p.G217S	0.742	superfamily_Mitoch_carrier	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC9A2	0	genome.wustl.edu	37	2	103321037	103321037	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	103321037	103321037	A	G	SNP	SLC9A2	NM_003048.3	human	genbank	58_37c	+1	validated	missense	c.1880	p.D627G	1.000	NULL	HMMPfam_Na_H_Exchanger	-	no_errors
SMAD3	0	genome.wustl.edu	37	15	67358560	67358560	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	15	67358560	67358560	A	G	SNP	SMAD3	NM_005902.3	human	genbank	58_37c	+1	reviewed	missense	c.68	p.Q23R	1.000	superfamily_SMAD MH1 domain	HMMPfam_MH2,HMMSmart_SM00524,HMMPfam_MH1,HMMSmart_SM00523,superfamily_SMAD/FHA domain,superfamily_SMAD MH1 domain	-	no_errors
SMARCC2	0	genome.wustl.edu	37	12	56572801	56572801	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	56572801	56572801	C	T	SNP	SMARCC2	NM_003075.3	human	genbank	58_37c	-1	reviewed	missense	c.1121	p.G374D	1.000	NULL	HMMSmart_SM00298,HMMSmart_SM00717,superfamily_BRCT domain,HMMPfam_SWIRM,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
SNTG2	0	genome.wustl.edu	37	2	1312322	1312322	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	1312322	1312322	C	T	SNP	SNTG2	NM_018968.3	human	genbank	58_37c	+1	reviewed	silent	c.1341	p.F447	0.993	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
SNX7	0	genome.wustl.edu	37	1	99157130	99157130	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	99157130	99157130	C	T	SNP	SNX7	NM_015976.3	human	genbank	58_37c	+1	reviewed	missense	c.514	p.R172C	1.000	HMMPfam_PX,HMMSmart_PX,superfamily_PX	HMMPfam_PX,HMMSmart_PX,superfamily_PX	-	no_errors
SP1	0	genome.wustl.edu	37	12	53775933	53775933	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	53775933	53775933	T	C	SNP	SP1	NM_138473.2	human	genbank	58_37c	+1	validated	missense	c.202	p.C68R	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
SPAG6	0	genome.wustl.edu	37	10	22680768	22680768	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	22680768	22680768	G	T	SNP	SPAG6	NM_012443.2	human	genbank	58_37c	+1	reviewed	silent	c.1116	p.R372	0.568	superfamily_ARM repeat	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
SPSB2	0	genome.wustl.edu	37	12	6981614	6981615	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	6981614	6981615	-	G	INS	SPSB2	NM_032641.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.452_451	p.Q151fs	0.000:0.001	HMMPfam_SPRY,HMMSmart_SPRY	HMMPfam_SOCS_box,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors
SSH3	0	genome.wustl.edu	37	11	67079319	67079319	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	67079319	67079319	G	A	SNP	SSH3	NM_017857.3	human	genbank	58_37c	+1	validated	silent	c.1941	p.Q647	1.000	NULL	HMMPfam_DSPc,HMMPfam_DEK_C,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SSR2	0	genome.wustl.edu	37	1	155984778	155984778	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	155984778	155984778	G	T	SNP	SSR2	NM_003145.3	human	genbank	58_37c	-1	reviewed	missense	c.337	p.L113M	1.000	HMMPfam_TRAP_beta	HMMPfam_TRAP_beta	-	no_errors
ST3GAL1	0	genome.wustl.edu	37	8	134477024	134477024	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	134477024	134477024	G	A	SNP	ST3GAL1	NM_003033.3	human	genbank	58_37c	-1	reviewed	missense	c.680	p.S227F	1.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
STAB2	0	genome.wustl.edu	37	12	104129268	104129268	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	104129268	104129268	G	T	SNP	STAB2	NM_017564.9	human	genbank	58_37c	+1	reviewed	splice_site	c.5461-1	e52-1	0.997	-	-	-	no_errors
STK38L	0	genome.wustl.edu	37	12	27475300	27475300	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	27475300	27475300	G	T	SNP	STK38L	NM_015000.3	human	genbank	58_37c	+1	validated	missense	c.1307	p.W436L	1.000	HMMSmart_S_TK_X,HMMPfam_Pkinase_C	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
SUCLA2	0	genome.wustl.edu	37	13	48563103	48563103	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	48563103	48563103	G	A	SNP	SUCLA2	NM_003850.2	human	genbank	58_37c	-1	reviewed	silent	c.285	p.V95	1.000	HMMPfam_ATP-grasp_2,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_Ligase_CoA,HMMPfam_ATP-grasp_2,superfamily_Succinyl-CoA synthetase domains,PatternScan_SUCCINYL_COA_LIG_3,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
SUSD2	0	genome.wustl.edu	37	22	24584283	24584283	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	24584283	24584283	G	T	SNP	SUSD2	NM_019601.3	human	genbank	58_37c	+1	validated	missense	c.2432	p.R811M	0.398	NULL	HMMPfam_Sushi,HMMSmart_CCP,HMMPfam_Somatomedin_B,HMMSmart_SO,PatternScan_SMB_1,HMMPfam_VWD,HMMSmart_VWD,HMMPfam_AMOP,HMMSmart_AMOP,superfamily_Complement_control_module,superfamily_SSF90188	-	no_errors
SYCP2L	0	genome.wustl.edu	37	6	10911066	10911066	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	10911066	10911066	A	G	SNP	SYCP2L	NM_001040274.2	human	genbank	58_37c	+1	validated	silent	c.882	p.S294	0.997	NULL	NULL	-	no_errors
SYPL1	0	genome.wustl.edu	37	7	105733467	105733467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	105733467	105733467	C	T	SNP	SYPL1	ENST00000464029	human	ensembl	58_37c	-1	known	missense	c.290	p.R97H	0.001	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TACC2	0	genome.wustl.edu	37	10	123848088	123848088	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	123848088	123848088	G	A	SNP	TACC2	NM_206862.2	human	genbank	58_37c	+1	reviewed	missense	c.5555	p.G1852D	0.000	NULL	HMMPfam_TACC	-	no_errors
TANC2	0	genome.wustl.edu	37	17	61176555	61176555	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	61176555	61176555	C	T	SNP	TANC2	NM_025185.3	human	genbank	58_37c	+1	validated	silent	c.159	p.S53	0.999	NULL	HMMPfam_TPR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TANC2	0	genome.wustl.edu	37	17	61498332	61498332	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	61498332	61498332	A	G	SNP	TANC2	NM_025185.3	human	genbank	58_37c	+1	validated	silent	c.4989	p.S1663	0.996	NULL	HMMPfam_TPR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TCERG1	0	genome.wustl.edu	37	5	145883505	145883506	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	5	145883505	145883506	GA	-	DEL	TCERG1	NM_006706.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.2666_2667	p.E892fs	1.000:0.891	superfamily_FF domain	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_FF,HMMSmart_SM00441,superfamily_FF domain	-	no_errors
TGFBR2	0	genome.wustl.edu	37	3	30713659	30713659	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	30713659	30713659	C	T	SNP	TGFBR2	NM_001024847.2	human	genbank	58_37c	+1	reviewed	silent	c.1059	p.H353	0.166	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_ecTbetaR2,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Snake toxin-like	-	no_errors
THSD7A	0	genome.wustl.edu	37	7	11464340	11464340	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	11464340	11464340	C	T	SNP	THSD7A	NM_015204.2	human	genbank	58_37c	-1	validated	silent	c.3366	p.V1122	0.991	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_errors
TIMELESS	0	genome.wustl.edu	37	12	56814908	56814908	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	56814908	56814908	G	A	SNP	TIMELESS	NM_003920.3	human	genbank	58_37c	-1	validated	missense	c.2879	p.A960V	0.004	HMMPfam_TIMELESS_C	HMMPfam_TIMELESS,HMMPfam_TIMELESS_C	-	no_errors
TIPRL	0	genome.wustl.edu	37	1	168168159	168168159	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	168168159	168168159	T	C	SNP	TIPRL	NM_152902.3	human	genbank	58_37c	+1	validated	silent	c.615	p.A205	0.921	HMMPfam_TIP41	HMMPfam_TIP41	-	no_errors
TM7SF4	0	genome.wustl.edu	37	8	105367367	105367367	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	105367367	105367367	A	G	SNP	TM7SF4	NM_030788.2	human	genbank	58_37c	+1	reviewed	missense	c.1292	p.Q431R	0.056	NULL	HMMPfam_DC_STAMP	-	no_errors
TMC1	0	genome.wustl.edu	37	9	75445589	75445589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	75445589	75445589	G	A	SNP	TMC1	NM_138691.2	human	genbank	58_37c	+1	reviewed	missense	c.2251	p.A751T	0.499	NULL	HMMPfam_TMC	-	no_errors
TMEM185A	0	genome.wustl.edu	37	X	148690503	148690503	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	148690503	148690503	A	G	SNP	TMEM185A	NM_032508.2	human	genbank	58_37c	-1	reviewed	silent	c.228	p.C76	1.000	HMMPfam_Tmemb_185A	HMMPfam_Tmemb_185A	-	no_errors
TNRC6B	0	genome.wustl.edu	37	22	40717093	40717093	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	40717093	40717093	G	T	SNP	TNRC6B	NM_015088.2	human	genbank	58_37c	+1	validated	splice_site	c.4645-1	e20-1	1.000	-	-	-	no_errors
TOP1MT	0	genome.wustl.edu	37	8	144406751	144406751	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	144406751	144406751	C	T	SNP	TOP1MT	NM_052963.1	human	genbank	58_37c	-1	reviewed	silent	c.720	p.V240	0.122	HMMPfam_Topoisom_I_N,superfamily_TopoI_DNA_bd_euk,HMMSmart_TOPEUc	HMMPfam_Topoisom_I_N,superfamily_TopoI_DNA_bd_euk,superfamily_Topismrse_insert,superfamily_DNA_brk_join_enz,HMMSmart_TOPEUc,HMMPfam_Topoisom_I,PatternScan_TOPOISOMERASE_I_EUK	-	no_errors
TPO	0	genome.wustl.edu	37	2	1520723	1520723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	2	1520723	1520723	G	A	SNP	TPO	NM_000547.5	human	genbank	58_37c	+1	reviewed	missense	c.2587	p.A863T	0.033	NULL	PatternScan_ASX_HYDROXYL,HMMPfam_Sushi,HMMSmart_SM00032,HMMSmart_SM00179,HMMPfam_An_peroxidase,HMMSmart_SM00181,superfamily_Heme-dependent peroxidases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_Complement control module/SCR domain,PatternScan_EGF_CA,PatternScan_PEROXIDASE_1,superfamily_EGF/Laminin	-	no_errors
TRANK1	0	genome.wustl.edu	37	3	36896783	36896783	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	36896783	36896783	C	T	SNP	TRANK1	NM_014831.2	human	genbank	58_37c	-1	provisional	missense	c.2648	p.R883H	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TRERF1	0	genome.wustl.edu	37	6	42204015	42204015	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	42204015	42204015	C	T	SNP	TRERF1	NM_033502.2	human	genbank	58_37c	-1	reviewed	silent	c.2994	p.T998	0.003	NULL	HMMPfam_ELM2,HMMSmart_SM00717,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
TRRAP	0	genome.wustl.edu	37	7	98574180	98574180	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	98574180	98574180	G	A	SNP	TRRAP	ENST00000456197	human	ensembl	58_37c	+1	known	missense	c.7178	p.R2393H	0.000	superfamily_ARM repeat	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_COPPER_BLUE,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TTC16	0	genome.wustl.edu	37	9	130485513	130485513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	9	130485513	130485513	C	T	SNP	TTC16	NM_144965.1	human	genbank	58_37c	+1	provisional	missense	c.773	p.A258V	0.272	superfamily_SSF48452	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
TTLL8	0	genome.wustl.edu	37	22	50471764	50471764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	22	50471764	50471764	G	A	SNP	TTLL8	NM_001080447.1	human	genbank	58_37c	-1	provisional	missense	c.1150	p.L384F	1.000	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
TYR	0	genome.wustl.edu	37	11	88911273	88911273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	11	88911273	88911273	G	A	SNP	TYR	NM_000372.4	human	genbank	58_37c	+1	reviewed	missense	c.152	p.G51D	1.000	NULL	PatternScan_EGF_LAM_1,HMMPfam_Tyrosinase,PatternScan_TYROSINASE_1,PatternScan_TYROSINASE_2,superfamily_Di-copper centre-containing domain,PatternScan_EGF_1	-	no_errors
TYW1B	0	genome.wustl.edu	37	7	72081768	72081768	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	7	72081768	72081768	G	T	SNP	TYW1B	NM_001145440.1	human	genbank	58_37c	-1	reviewed	silent	c.1674	p.P558	0.998	HMMPfam_Wyosine_form	HMMPfam_Radical_SAM,HMMPfam_Flavodoxin_1,HMMPfam_Wyosine_form,superfamily_Flavoproteins	-	pseudogene
UBA6	0	genome.wustl.edu	37	4	68528872	68528872	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	68528872	68528872	C	T	SNP	UBA6	NM_018227.5	human	genbank	58_37c	-1	validated	missense	c.1022	p.R341H	1.000	superfamily_Activating enzymes of the ubiquitin-like proteins	HMMPfam_UBACT,HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_UBA_e1_C,HMMPfam_UBA_e1_thiolCys	-	no_errors
USP15	0	genome.wustl.edu	37	12	62786055	62786056	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	62786055	62786056	TT	-	DEL	USP15	NM_006313.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.2221_2222	p.F741fs	1.000:1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,HMMSmart_DUSP,HMMPfam_DUF1055,superfamily_RNA3apos_cycl/enolpyr_transf_A/B,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
VPRBP	0	genome.wustl.edu	37	3	51452257	51452257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	3	51452257	51452257	C	T	SNP	VPRBP	NM_014703.2	human	genbank	58_37c	-1	validated	missense	c.3499	p.A1167T	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00667,superfamily_WD40 repeat-like,HMMPfam_LisH,superfamily_ARM repeat	-	no_errors
VPS16	0	genome.wustl.edu	37	20	2840965	2840965	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	20	2840965	2840965	G	T	SNP	VPS16	NM_022575.2	human	genbank	58_37c	+1	reviewed	silent	c.321	p.L107	0.990	HMMPfam_Vps16_N	HMMPfam_Vps16_C,HMMPfam_Vps16_N	-	no_errors
WBP11	0	genome.wustl.edu	37	12	14948019	14948019	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	14948019	14948019	A	G	SNP	WBP11	NM_016312.2	human	genbank	58_37c	-1	reviewed	missense	c.407	p.V136A	1.000	NULL	HMMPfam_Wbp11	-	no_errors
WDFY3	0	genome.wustl.edu	37	4	85654705	85654705	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	4	85654705	85654705	G	A	SNP	WDFY3	NM_014991.4	human	genbank	58_37c	-1	reviewed	silent	c.7051	p.L2351	1.000	superfamily_Cyclin-like	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,superfamily_FYVE/PHD zinc finger,superfamily_Cyclin-like,superfamily_WD40 repeat-like,superfamily_ARM repeat,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
WDR11	0	genome.wustl.edu	37	10	122643389	122643389	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	122643389	122643389	A	G	SNP	WDR11	NM_018117.11	human	genbank	58_37c	+1	reviewed	missense	c.1837	p.I613V	0.165	superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WDR37	0	genome.wustl.edu	37	10	1151084	1151084	+	Missense_Mutation	SNP	C	C	T	rs139912371	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	10	1151084	1151084	C	T	SNP	WDR37	NM_014023.3	human	genbank	58_37c	+1	reviewed	missense	c.980	p.T327M	1.000	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WTIP	0	genome.wustl.edu	37	19	34991089	34991089	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	34991089	34991089	G	A	SNP	WTIP	NM_001080436.1	human	genbank	58_37c	+1	provisional	missense	c.1208	p.G403D	1.000	HMMPfam_LIM,HMMSmart_SM00132	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
WWP2	0	genome.wustl.edu	37	16	69965781	69965781	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	69965781	69965781	G	T	SNP	WWP2	NM_007014.3	human	genbank	58_37c	+1	reviewed	missense	c.1670	p.G557V	1.000	HMMSmart_HECTc,superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-	no_errors
XPO4	0	genome.wustl.edu	37	13	21362688	21362689	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	13	21362688	21362689	-	T	INS	XPO4	NM_022459.4	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2984_2983	p.I995fs	1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors
YARS2	0	genome.wustl.edu	37	12	32903765	32903765	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	12	32903765	32903765	G	A	SNP	YARS2	NM_001040436.1	human	genbank	58_37c	-1	validated	missense	c.991	p.H331Y	1.000	HMMPfam_tRNA-synt_1b,superfamily_SSF52374	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_tRNA-synt_1b,superfamily_SSF52374,superfamily_SSF55174	-	no_errors
ZBTB41	0	genome.wustl.edu	37	1	197169434	197169437	+	Frame_Shift_Del	DEL	GAGG	GAGG	-	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	GAGG	GAGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	1	197169434	197169437	GAGG	-	DEL	ZBTB41	NM_194314.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.170_167	p.P56fs	0.998:1.000:0.998:1.000	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZCCHC2	0	genome.wustl.edu	37	18	60207019	60207019	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	60207019	60207019	C	T	SNP	ZCCHC2	NM_017742.4	human	genbank	58_37c	+1	validated	nonsense	c.1045	p.R349*	1.000	superfamily_PX	superfamily_PX,HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC	-	no_errors
ZHX1	0	genome.wustl.edu	37	8	124267675	124267675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	8	124267675	124267675	A	G	SNP	ZHX1	NM_001017926.1	human	genbank	58_37c	-1	reviewed	missense	c.512	p.V171A	0.095	NULL	HMMPfam_Homeobox,HMMSmart_HOX,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors
ZMYND8	0	genome.wustl.edu	37	20	45855964	45855964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	20	45855964	45855964	C	T	SNP	ZMYND8	NM_183047.1	human	genbank	58_37c	-1	reviewed	missense	c.2860	p.E954K	1.000	NULL	HMMPfam_PWWP,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMSmart_PHD,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_FYVE_PHD_ZnF,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SSF63748	-	no_errors
ZNF132	0	genome.wustl.edu	37	19	58946279	58946279	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	58946279	58946279	C	T	SNP	ZNF132	NM_003433.3	human	genbank	58_37c	-1	validated	missense	c.532	p.A178T	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF157	0	genome.wustl.edu	37	X	47272048	47272048	+	Silent	SNP	C	C	T	rs140043132	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	X	47272048	47272048	C	T	SNP	ZNF157	NM_003446.3	human	genbank	58_37c	+1	reviewed	silent	c.576	p.C192	0.384	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF213	0	genome.wustl.edu	37	16	3188811	3188811	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	16	3188811	3188811	G	T	SNP	ZNF213	NM_001134655.1	human	genbank	58_37c	+1	validated	missense	c.589	p.G197W	0.168	superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF292	0	genome.wustl.edu	37	6	87966306	87966306	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	87966306	87966306	C	T	SNP	ZNF292	NM_015021.1	human	genbank	58_37c	+1	validated	nonsense	c.2959	p.Q987*	0.997	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF415	0	genome.wustl.edu	37	19	53612925	53612925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	53612925	53612925	G	A	SNP	ZNF415	NM_018355.2	human	genbank	58_37c	-1	validated	missense	c.373	p.R125C	0.001	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF516	0	genome.wustl.edu	37	18	74092170	74092170	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	18	74092170	74092170	C	T	SNP	ZNF516	ENST00000443185	human	ensembl	58_37c	-1	known	missense	c.1900	p.A634T	0.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF780B	0	genome.wustl.edu	37	19	40542427	40542427	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	19	40542427	40542427	G	A	SNP	ZNF780B	NM_001005851.2	human	genbank	58_37c	-1	validated	silent	c.339	p.L113	0.002	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZSCAN12	0	genome.wustl.edu	37	6	28359098	28359098	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	6	28359098	28359098	T	C	SNP	ZSCAN12	ENST00000361028	human	ensembl	58_37c	-1	known	missense	c.969	p.I323M	0.290	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZZEF1	0	genome.wustl.edu	37	17	3919737	3919737	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EW-A1IZ-01A-11D-A188-09	TCGA-EW-A1IZ-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18db4143-48cc-424c-8d23-46cf23056528	e528b9ef-53e6-49d4-a86c-648a752d1835	17	3919737	3919737	G	A	SNP	ZZEF1	NM_015113.3	human	genbank	58_37c	-1	validated	silent	c.8025	p.G2675	1.000	NULL	HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Spermadhesin CUB domain,HMMSmart_SM00054,HMMPfam_APC10,superfamily_Galactose-binding domain-like,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
