| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/2587249/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_skcm.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | SKCM |
| Execution Times: | |
| Submitted: | 13:11:09 25-02-13 |
| Completed: | |
| Elapsed: | 02 hrs 14 mins 26 secs |
step 1. GDAC_clinicalDataPicker [id: 325725] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/2587249/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_skcm.tsv |
| nodeColumn | 1 |
| outPrefix | SKCM |
| Output Files: | |
| SKCM.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 14:02:08 25-02-13 |
| Completed: | 14:37:51 25-02-13 |
| Elapsed: | 00 hrs 35 mins 42 secs |
step 2. GDAC_clinicalDataPickerReport [id: 325728] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | SKCM.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 14:02:08 25-02-13 |
| Completed: | 15:25:29 25-02-13 |
| Elapsed: | 01 hrs 23 mins 21 secs |