Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
TCHH	7062	broad.mit.edu	37	1	152080269	152080269	+	Silent	SNP	T	C	C			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr1:152080269T>C	uc001ezp.2	-	2	5424	c.5424A>G	c.(5422-5424)GAA>GAG	p.E1808E	TCHH_uc009wne.1_Silent_p.E1808E	NM_007113	NP_009044	Q07283	TRHY_HUMAN	trichohyalin	1808	23 X 26 AA approximate tandem repeats.				keratinization	cytoskeleton	calcium ion binding			ovary(3)|kidney(1)|central_nervous_system(1)	5	Hepatocellular(266;0.0877)|Melanoma(130;0.116)|all_hematologic(923;0.127)		LUSC - Lung squamous cell carcinoma(543;0.206)			GCTGCTGTTCTTCCCTCTCCT	0.597000													3	102					0	0	1	0	0
TCHH	7062	broad.mit.edu	37	1	152080284	152080284	+	Silent	SNP	T	G	G			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr1:152080284T>G	uc001ezp.2	-	2	5409	c.5409A>C	c.(5407-5409)CTA>CTC	p.L1803L	TCHH_uc009wne.1_Silent_p.L1803L	NM_007113	NP_009044	Q07283	TRHY_HUMAN	trichohyalin	1803	23 X 26 AA approximate tandem repeats.				keratinization	cytoskeleton	calcium ion binding			ovary(3)|kidney(1)|central_nervous_system(1)	5	Hepatocellular(266;0.0877)|Melanoma(130;0.116)|all_hematologic(923;0.127)		LUSC - Lung squamous cell carcinoma(543;0.206)			TCTCCTGGCGTAGCTGTTCCT	0.577000													3	116					0	0	1	0	0
LOC284232	284232	broad.mit.edu	37	13	19415650	19415650	+	RNA	SNP	C	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr13:19415650C>A	uc010tcj.1	-	1		c.30460G>T				NR_027995				Homo sapiens ankyrin repeat domain 20 family, member A2 pseudogene (LOC284232), non-coding RNA.												0						aaaacccaaacaaaacaaaaC	0.179000													4	27					1.06961e-07	1.12904e-07	1	1	0
LOC284232	284232	broad.mit.edu	37	13	19415655	19415655	+	RNA	SNP	C	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr13:19415655C>A	uc010tcj.1	-	1		c.30455G>T				NR_027995				Homo sapiens ankyrin repeat domain 20 family, member A2 pseudogene (LOC284232), non-coding RNA.												0						ccaaacaaaacaaaaCAAAAC	0.184000													6	39					6.40141e-05	6.40141e-05	1	1	0
NLRP9	338321	broad.mit.edu	37	19	56244558	56244558	+	Silent	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr19:56244558G>A	uc002qly.2	-	2	667	c.639C>T	c.(637-639)ATC>ATT	p.I213I		NM_176820	NP_789790	Q7RTR0	NALP9_HUMAN	NLR family, pyrin domain containing 9	213	NACHT.					cytoplasm	ATP binding			skin(4)|ovary(2)|breast(1)	7		Colorectal(82;0.000133)|Ovarian(87;0.133)		GBM - Glioblastoma multiforme(193;0.123)		AAATGTCTTCGATCTTCTCTG	0.443000													4	27					0	0	1	0	0
ZNF835	90485	broad.mit.edu	37	19	57175063	57175063	+	Missense_Mutation	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr19:57175063G>A	uc010ygo.1	-	2	1570	c.1570C>T	c.(1570-1572)CGC>TGC	p.R524C	ZNF835_uc010ygn.1_Missense_Mutation_p.R502C	NM_001005850	NP_001005850			zinc finger protein 835											pancreas(3)|skin(1)	4						GGGCAAAGGCGTCCCGAACTG	0.647000													5	190					0	0	1	0	0
DNAH5	1767	broad.mit.edu	37	5	13708384	13708384	+	Missense_Mutation	SNP	C	T	T			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr5:13708384C>T	uc003jfd.2	-	76	13228	c.13186G>A	c.(13186-13188)GAA>AAA	p.E4396K	DNAH5_uc003jfc.2_Missense_Mutation_p.E564K	NM_001369	NP_001360	Q8TE73	DYH5_HUMAN	dynein, axonemal, heavy chain 5	4396	Potential.				microtubule-based movement	cilium axoneme|cytoplasm|microtubule	ATP binding|ATPase activity|microtubule motor activity			ovary(14)|skin(13)|upper_aerodigestive_tract(1)|central_nervous_system(1)|breast(1)|pancreas(1)	31	Lung NSC(4;0.00476)					CTGTCTATTTCCTGCCTGAGG	0.473000									Kartagener_syndrome				4	141					0	0	1	0	0
BRAF	673	broad.mit.edu	37	7	140453136	140453136	+	Missense_Mutation	SNP	A	T	T			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr7:140453136A>T	uc003vwc.3	-	15	1860	c.1799T>A	c.(1798-1800)GTG>GAG	p.V600E		NM_004333	NP_004324	P15056	BRAF_HUMAN	B-Raf	600	Protein kinase.		V -> D (in a melanoma cell line; requires 2 nucleotide substitutions).|V -> E (in sarcoma, colorectal adenocarcinoma, metastatic melanoma, ovarian serous carcinoma, pilocytic astrocytoma; somatic mutation; most common mutation; constitutive and elevated kinase activity; efficiently induces cell transformation; suppression of mutation in melanoma causes growth arrest and promotes apoptosis).		activation of MAPKK activity|anti-apoptosis|nerve growth factor receptor signaling pathway|organ morphogenesis|positive regulation of peptidyl-serine phosphorylation|small GTPase mediated signal transduction|synaptic transmission	cytosol|nucleus|plasma membrane	ATP binding|metal ion binding	p.V600E(16892)|p.V600?(325)|p.V600K(176)|p.V600R(36)|p.V600M(25)|p.V600A(23)|p.V600D(21)|p.V600G(11)|p.V600_K601>E(8)|p.T599_V600insTT(3)|p.T599_R603>I(2)|p.T599_V600>IAL(2)|p.V600L(2)|p.T599_V600insT(2)|p.V600_W604del(1)|p.V600_S605>DV(1)|p.V600_S605>D(1)|p.T599_V600insV(1)|p.T599_V600insDFGLAT(1)	KIAA1549/BRAF(229)|AKAP9_ENST00000356239/BRAF(10)|AGTRAP/BRAF(2)|FCHSD1/BRAF(2)|SLC45A3/BRAF(2)	thyroid(8166)|large_intestine(5052)|skin(3798)|NS(368)|central_nervous_system(284)|ovary(236)|lung(78)|eye(53)|prostate(44)|endometrium(30)|biliary_tract(28)|soft_tissue(27)|haematopoietic_and_lymphoid_tissue(22)|breast(18)|upper_aerodigestive_tract(13)|stomach(13)|pancreas(10)|small_intestine(10)|testis(7)|bone(6)|cervix(5)|genital_tract(4)|oesophagus(3)|urinary_tract(3)|adrenal_gland(3)|gastrointestinal_tract_(site_indeterminate)(2)|liver(2)|meninges(1)|kidney(1)|autonomic_ganglia(1)|pituitary(1)|salivary_gland(1)	18290	Melanoma(164;0.00956)				Sorafenib(DB00398)	TCGAGATTTCACTGTAGCTAG	0.368000	V600E(UACC257_SKIN)|V600D(K029AX_SKIN)|V600E(HS695T_SKIN)|V600E(COLO679_SKIN)|V600E(BT474_BREAST)|V600E(IGR39_SKIN)|V600E(A101D_SKIN)|V600E(COLO783_SKIN)|V600E(IGR37_SKIN)|V600E(A375_SKIN)|V600E(WM793_SKIN)|V600E(COLO818_SKIN)|V600E(HS294T_SKIN)|V600E(SKMEL28_SKIN)|V600E(DU4475_BREAST)|V600E(SIGM5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|V600E(IGR1_SKIN)|V600E(SKHEP1_LIVER)|V600E(WM983B_SKIN)|V600E(GCT_SOFT_TISSUE)|V600E(RVH421_SKIN)|V600D(WM2664_SKIN)|V600E(CL34_LARGE_INTESTINE)|V600E(SKMEL24_SKIN)|V600D(WM115_SKIN)|V600E(MALME3M_SKIN)|V600E(A673_BONE)|V600E(C32_SKIN)|V600E(DBTRG05MG_CENTRAL_NERVOUS_SYSTEM)|V600E(COLO800_SKIN)|V600E(COLO741_SKIN)|V600E(HS939T_SKIN)|V600E(COLO205_LARGE_INTESTINE)|V600E(K029AX_SKIN)|V600E(AM38_CENTRAL_NERVOUS_SYSTEM)|V600E(SH4_SKIN)|V600E(WM88_SKIN)|V600E(KG1C_CENTRAL_NERVOUS_SYSTEM)|V600E(COLO849_SKIN)|V600E(MELHO_SKIN)|V600E(BHT101_THYROID)|V600E(G361_SKIN)|V600E(UACC62_SKIN)|V600E(BCPAP_THYROID)|V600E(8505C_THYROID)|V600E(SW1417_LARGE_INTESTINE)|V600E(COLO829_SKIN)|V600E(RKO_LARGE_INTESTINE)|V600E(A2058_SKIN)|V600E(RPMI7951_SKIN)|V600E(OUMS23_LARGE_INTESTINE)|V600E(SKMEL5_SKIN)|V600E(ES2_OVARY)|V600E(LOXIMVI_SKIN)	61	Mis|T|O	AKAP9|KIAA1549	melanoma|colorectal|papillary thyroid|borderline ov|Non small-cell lung cancer (NSCLC)|cholangiocarcinoma|pilocytic astrocytoma		Cardio-facio-cutaneous syndrome		Cardiofaciocutaneous_syndrome				29	53					0	0	1	0	0
Unknown	0	broad.mit.edu	37	MT	3244	3244	+	5'Flank	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrM:3244G>A	uc004coq.3	-						uc004cos.3_RNA|uc011mfh.1_5'Flank					Homo sapiens cDNA: FLJ22857 fis, clone KAT01615.																		aagatggcagagcccggtaat	0.289000													48	220					0	0	1	0	0
Unknown	0	broad.mit.edu	37	MT	11184	11184	+	RNA	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrM:11184G>A	uc004cov.3	+	1		c.607G>A			uc004cow.1_5'Flank|uc004cox.3_5'Flank					Homo sapiens potential LAG1 interactor mRNA, partial cds.																		CCAGCCAGAACGCCTGAACGC	0.463000													8	319					0	0	1	0	0
RLIM	51132	broad.mit.edu	37	X	73811995	73811995	+	Silent	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrX:73811995G>A	uc004ebu.2	-	5	1445	c.1155C>T	c.(1153-1155)CCC>CCT	p.P385P	RLIM_uc004ebw.2_Silent_p.P385P	NM_183353	NP_899196	Q9NVW2	RNF12_HUMAN	ring finger protein, LIM domain interacting	385					random inactivation of X chromosome|transcription, DNA-dependent|ubiquitin-dependent protein catabolic process	cytoplasm|transcriptional repressor complex	transcription corepressor activity|ubiquitin-protein ligase activity|zinc ion binding			ovary(2)	2						TTCTACGAATGGGAATTCTGA	0.413000													4	98					0	0	1	0	0
FLNA	2316	broad.mit.edu	37	X	153590835	153590835	+	Missense_Mutation	SNP	G	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrX:153590835G>A	uc004fkk.2	-	17	2765	c.2516C>T	c.(2515-2517)ACG>ATG	p.T839M	FLNA_uc010nuu.1_Missense_Mutation_p.T839M	NM_001110556	NP_001104026	P21333	FLNA_HUMAN	filamin A, alpha isoform 2	839	Filamin 6.				actin crosslink formation|actin cytoskeleton reorganization|cell junction assembly|cytoplasmic sequestering of protein|establishment of protein localization|inhibition of adenylate cyclase activity by dopamine receptor signaling pathway|negative regulation of protein catabolic process|negative regulation of sequence-specific DNA binding transcription factor activity|platelet activation|platelet degranulation|positive regulation of I-kappaB kinase/NF-kappaB cascade|positive regulation of transcription factor import into nucleus|protein localization at cell surface|protein stabilization|receptor clustering	cell cortex|cytosol|extracellular region|nucleus|plasma membrane	actin filament binding|Fc-gamma receptor I complex binding|glycoprotein binding|GTP-Ral binding|protein homodimerization activity|Rac GTPase binding|signal transducer activity|transcription factor binding			breast(6)	6	all_cancers(53;3.7e-16)|all_epithelial(53;2.97e-10)|all_lung(58;1.84e-07)|Lung NSC(58;5.84e-07)|all_hematologic(71;2.45e-06)|Acute lymphoblastic leukemia(192;6.56e-05)|Breast(217;0.176)					CCCCCGGGGCGTGTACTTGAC	0.592000													19	149					0	0	1	0	0
Unknown	0	broad.mit.edu	37	10	35956329	35956330	+	IGR	INS	-	CAT	CAT			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:35956329_35956330insCAT								FZD8 (25967 upstream) : None (None downstream)																							ccatcccccaccatcaccacca	0.000													4	6	---	---	---	---					
Unknown	0	broad.mit.edu	37	10	38817018	38817022	+	IGR	DEL	AATGG	-	-	rs112507336		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:38817018_38817022delAATGG								LOC399744 (75938 upstream) : None (None downstream)																							aaaggactcaaatggaatggaatgg	0.000													4	8	---	---	---	---					
Unknown	0	broad.mit.edu	37	10	42357918	42357918	+	IGR	DEL	T	-	-	rs79279953		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:42357918delT								None (None upstream) : LOC441666 (469397 downstream)																							tgtccattcgtgttgattcct	0.000													4	7	---	---	---	---					
Unknown	0	broad.mit.edu	37	10	42387928	42387928	+	IGR	DEL	T	-	-	rs77755875		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:42387928delT								None (None upstream) : LOC441666 (439387 downstream)																							tcaaacggaatcaaacggaat	0.000													8	1427	---	---	---	---					
Unknown	0	broad.mit.edu	37	10	42530677	42530678	+	IGR	INS	-	T	T			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:42530677_42530678insT								None (None upstream) : LOC441666 (296637 downstream)																							tctaaagaacgttcaactctgt	0.000													14	36	---	---	---	---					
Unknown	0	broad.mit.edu	37	10	134953756	134953757	+	IGR	INS	-	T	T			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr10:134953756_134953757insT								GPR123 (8578 upstream) : KNDC1 (20214 downstream)																							ttcactgccccgcccctgcccc	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	12	116095687	116095691	+	IGR	DEL	TTCTT	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr12:116095687_116095691delTTCTT								TBX3 (973718 upstream) : MED13L (300692 downstream)																							cctcctcctcttcttctccttcttc	0.059													3	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	12	131962092	131962093	+	IGR	INS	-	ATA	ATA			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr12:131962092_131962093insATA								LOC116437 (264617 upstream) : SFRS8 (233542 downstream)																							tggtaatggtggtggtgatggt	0.079													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	15	20464940	20464940	+	IGR	DEL	C	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr15:20464940delC								None (None upstream) : GOLGA6L6 (272154 downstream)																							gcagcctcaacctcctgggct	0.025													3	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	15	20869307	20869308	+	IGR	DEL	CA	-	-	rs113986689		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr15:20869307_20869308delCA								GOLGA8C (88281 upstream) : BCL8 (748 downstream)																							CACTAAGATGCACAGAGTACTC	0.282													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	15	102521241	102521242	+	5'Flank	INS	-	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr15:102521241_102521242insA	uc010utv.1	-						uc002cds.2_5'Flank|uc010utw.1_5'Flank					SubName: Full=DEAD/H box polypeptide 11 like 9;																		gggttagggttggggttagggt	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	16	8613643	8613644	+	IGR	INS	-	TGAG	TGAG	rs147952983	by1000genomes	TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr16:8613643_8613644insTGAG								A2BP1 (850303 upstream) : TMEM114 (5859 downstream)																							gaatgagtaaatgagtgagtga	0.000													3	3	---	---	---	---					
Unknown	0	broad.mit.edu	37	16	32845625	32845625	+	IGR	DEL	T	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr16:32845625delT								TP53TG3B (156747 upstream) : SLC6A10P (43172 downstream)																							TGACTGGTAATTTCTTCTGAA	0.403													4	6	---	---	---	---					
Unknown	0	broad.mit.edu	37	16	33865621	33865621	+	IGR	DEL	T	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr16:33865621delT								SLC6A10P (969158 upstream) : MIR1826 (99887 downstream)																							aatggTGAAATGAAATgtgag	0.010													5	9	---	---	---	---					
TMC8	147138	broad.mit.edu	37	17	76134248	76134248	+	Frame_Shift_Del	DEL	C	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr17:76134248delC	uc002jup.2	+	12	1894	c.1512delC	c.(1510-1512)TTCfs	p.F504fs	TMC8_uc002juq.2_Frame_Shift_Del_p.F281fs|TMC8_uc010wtr.1_3'UTR|TMC8_uc002jur.1_5'UTR	NM_152468	NP_689681	Q8IU68	TMC8_HUMAN	transmembrane channel-like 8	504	Helical; (Potential).					endoplasmic reticulum membrane|integral to membrane					0			BRCA - Breast invasive adenocarcinoma(99;0.00269)|Lung(188;0.0973)|OV - Ovarian serous cystadenocarcinoma(97;0.192)			TCTTCCTCTTCCTCACCTTCT	0.617									Epidermodysplasia_Verruciformis_Familial_Clustering_of				12	119	---	---	---	---					
Unknown	0	broad.mit.edu	37	18	108148	108148	+	5'Flank	DEL	C	-	-	rs149468414		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr18:108148delC	uc002kke.2	+											Homo sapiens Rho-associated, coiled-coil containing protein kinase 1, mRNA (cDNA clone IMAGE:5269982), complete cds.																		tatctctgcactgttaaccga	0.000													7	162	---	---	---	---					
Unknown	0	broad.mit.edu	37	18	76803491	76803492	+	IGR	INS	-	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr18:76803491_76803492insA								SALL3 (45300 upstream) : ATP9B (25905 downstream)																							ccgcatcctccaccccaacccc	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	18	77393773	77393774	+	IGR	INS	-	TGG	TGG	rs143811471		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr18:77393773_77393774insTGG								NFATC1 (104451 upstream) : CTDP1 (46027 downstream)																							ggtgctgatgatggtgctgatg	0.000													4	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	19	27732576	27732577	+	IGR	INS	-	CAGAATGATTCT	CAGAATGATTCT			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr19:27732576_27732577insCAGAATGATTCT								None (None upstream) : LOC148189 (548825 downstream)																							taaaaacaagacagaaactcct	0.000													9	33	---	---	---	---					
Unknown	0	broad.mit.edu	37	2	123421531	123421533	+	IGR	DEL	TGT	-	-	rs59110900		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr2:123421531_123421533delTGT								TSN (896105 upstream) : None (None downstream)																							ctgctgctgctgttgctgctgct	0.345													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	20	29607523	29607523	+	IGR	DEL	T	-	-	rs111896705		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr20:29607523delT								None (None upstream) : FRG1B (4356 downstream)																							acatcccccctggctcacttg	0.000													3	3	---	---	---	---					
Unknown	0	broad.mit.edu	37	21	10720584	10720585	+	IGR	INS	-	A	A	rs146809111		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr21:10720584_10720585insA								None (None upstream) : TPTE (186158 downstream)																							ttcgcagaaatttcctttgcag	0.000													5	10	---	---	---	---					
Unknown	0	broad.mit.edu	37	22	17039475	17039475	+	IGR	DEL	G	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr22:17039475delG								OR11H1 (589671 upstream) : CCT8L2 (32173 downstream)																							agccagccaagccagccaagc	0.000													3	3	---	---	---	---					
Unknown	0	broad.mit.edu	37	22	20151656	20151657	+	IGR	INS	-	ACC	ACC	rs141600104		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr22:20151656_20151657insACC								ZDHHC8 (16127 upstream) : LOC150197 (42198 downstream)																							ccaccatcactaccaccaccac	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	22	49401379	49401382	+	IGR	DEL	TGTG	-	-	rs72001735		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr22:49401379_49401382delTGTG								FAM19A5 (253637 upstream) : C22orf34 (406794 downstream)																							tgtatgttcatgtgtgtgtgtgtg	0.137													4	3	---	---	---	---					
SLC6A1	6529	broad.mit.edu	37	3	11034116	11034117	+	5'Flank	DEL	GG	-	-	rs35296635		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr3:11034116_11034117delGG	uc010hdq.2	+							NM_003042	NP_003033	P30531	SC6A1_HUMAN	solute carrier family 6 (neurotransmitter						neurotransmitter secretion	integral to plasma membrane	gamma-aminobutyric acid:sodium symporter activity|neurotransmitter:sodium symporter activity			ovary(1)|skin(1)	2		Ovarian(110;0.0392)		OV - Ovarian serous cystadenocarcinoma(96;0.00099)	Cocaine(DB00907)|Tiagabine(DB00906)	gaggaagagaggggagaaagag	0.178													4	2	---	---	---	---					
Unknown	0	broad.mit.edu	37	3	194284078	194284079	+	IGR	INS	-	T	T			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr3:194284078_194284079insT								ATP13A3 (95110 upstream) : TMEM44 (24324 downstream)																							GCCCCCCTCCCttttttttttg	0.267													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	3	197186538	197186539	+	IGR	INS	-	G	G	rs140055679		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr3:197186538_197186539insG								DLG1 (160395 upstream) : BDH1 (50116 downstream)																							TGTGGTCGGGAGGGATGCAGTT	0.322													3	6	---	---	---	---					
Unknown	0	broad.mit.edu	37	4	6005875	6005875	+	IGR	DEL	G	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr4:6005875delG								C4orf50 (15709 upstream) : JAKMIP1 (22051 downstream)																							tggtgatgatggtgatggtga	0.000													4	9	---	---	---	---					
Unknown	0	broad.mit.edu	37	4	190201125	190201126	+	IGR	INS	-	CT	CT	rs142468040		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr4:190201125_190201126insCT								None (None upstream) : FRG1 (660848 downstream)																							agtgtctggaactctgcagggg	0.000													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	5	73816044	73816046	+	IGR	DEL	AGG	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr5:73816044_73816046delAGG								RGNEF (578631 upstream) : ENC1 (107189 downstream)																							GGTGGGGGGCaggaggaggagga	0.281													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	6	167846533	167846534	+	IGR	INS	-	A	A			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr6:167846533_167846534insA								TCP10 (48535 upstream) : C6orf123 (338687 downstream)																							gtggtggcagtgtgtggatggt	0.020													5	11	---	---	---	---					
Unknown	0	broad.mit.edu	37	7	56699457	56699457	+	IGR	DEL	A	-	-	rs78077053		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr7:56699457delA								DKFZp434L192 (134480 upstream) : ZNF479 (487871 downstream)																							TTCATAGTCCAAAAAAAAAAT	0.294													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	7	57992549	57992550	+	IGR	INS	-	T	T	rs145704334		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr7:57992549_57992550insT								ZNF716 (459284 upstream) : None (None downstream)																							cttctgtgtagtttttatgtga	0.000													3	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	7	61821381	61821381	+	IGR	DEL	C	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr7:61821381delC								None (None upstream) : LOC643955 (930291 downstream)																							gccaccgcagctttttgtcgc	0.109													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	7	151645273	151645274	+	IGR	DEL	TG	-	-	rs10588774		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr7:151645273_151645274delTG								PRKAG2 (70957 upstream) : GALNTL5 (8237 downstream)																							tgtgtatgtatgtgtgtgtgaa	0.000													4	3	---	---	---	---					
Unknown	0	broad.mit.edu	37	8	20097213	20097214	+	IGR	DEL	TG	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr8:20097213_20097214delTG								ATP6V1B2 (18008 upstream) : LZTS1 (6463 downstream)																							ctcgtgtgcatgtgtgtgtgtg	0.426													3	5	---	---	---	---					
TRAM1	23471	broad.mit.edu	37	8	71520608	71520609	+	5'Flank	INS	-	A	A	rs112550133		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr8:71520608_71520609insA	uc003xyo.1	-						TRAM1_uc011lfc.1_5'UTR	NM_014294	NP_055109	Q15629	TRAM1_HUMAN	translocation associated membrane protein 1						cotranslational protein targeting to membrane|transmembrane transport	endoplasmic reticulum membrane|integral to membrane	protein binding|receptor activity			ovary(1)	1			Epithelial(68;0.00679)|all cancers(69;0.0324)|OV - Ovarian serous cystadenocarcinoma(28;0.0509)			CCGCCCGGGGGAAAAAAAAAAA	0.723													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	9	66485832	66485832	+	IGR	DEL	G	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr9:66485832delG								FAM74A4 (991446 upstream) : LOC442421 (10638 downstream)																							gtctcaaaaagtaaaaaggag	0.000													3	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	9	68416273	68416273	+	IGR	DEL	G	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr9:68416273delG								FAM27B (622084 upstream) : MIR1299 (585966 downstream)																							CTAGGtttttggttgttcttt	0.030													4	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	9	68424476	68424476	+	IGR	DEL	A	-	-	rs141661264		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chr9:68424476delA								FAM27B (630287 upstream) : MIR1299 (577763 downstream)																							TCATCACGGGAATCTTGTACA	0.338													12	20	---	---	---	---					
Unknown	0	broad.mit.edu	37	M	12418	12418	+	RNA	DEL	A	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrM:12418delA	uc004cox.3	+	1		c.82delA			uc004coy.2_5'Flank					Homo sapiens NADH dehydrogenase subunit 5 (MTND5) mRNA, RNA 5, complete cds; mitochondrial gene for mitochondrial product.																		TTAACCCTAACAAAAAAAACT	0.413													8	320	---	---	---	---					
Unknown	0	broad.mit.edu	37	X	21699800	21699801	+	IGR	DEL	GT	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrX:21699800_21699801delGT								KLHL34 (23352 upstream) : SMPX (24291 downstream)																							aaaacaaaacgtgtgtgtgtgt	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	X	53852846	53852846	+	IGR	DEL	A	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrX:53852846delA								HUWE1 (139173 upstream) : PHF8 (110268 downstream)																							ATTTTACAGTAAAAAAAaaaa	0.159													7	9	---	---	---	---					
Unknown	0	broad.mit.edu	37	X	152655185	152655186	+	IGR	INS	-	CA	CA			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrX:152655185_152655186insCA								ZNF275 (36802 upstream) : ZFP92 (28595 downstream)																							accatgcacaccacacacacac	0.000													2	4	---	---	---	---					
Unknown	0	broad.mit.edu	37	Y	13451548	13451549	+	IGR	INS	-	CACTG	CACTG	rs74645724		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrY:13451548_13451549insCACTG								None (None upstream) : None (None downstream)																							ccactccactccactcgatggc	0.000													6	8	---	---	---	---					
Unknown	0	broad.mit.edu	37	Y	58974072	58974081	+	IGR	DEL	ATTCCATTCT	-	-			TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrY:58974072_58974081delATTCCATTCT								None (None upstream) : None (None downstream)																							aatccattccattccattctattccattcc	0.000													3	3	---	---	---	---					
Unknown	0	broad.mit.edu	37	Y	59016409	59016409	+	IGR	DEL	T	-	-	rs146809444		TCGA-DJ-A3UM-01A-11D-A22D-08	TCGA-DJ-A3UM-10A-01D-A22D-08									Somatic	Phase_I	Capture				Illumina GAIIx	920558c4-24b2-41c0-8b2f-02d174d20e39	6ed58898-d4aa-4a0e-be59-25b1e8fbcca9	g.chrY:59016409delT								None (None upstream) : None (None downstream)																							ttttggaaactttttttgtag	0.000													2	4	---	---	---	---					
