Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
NRAS	4893	broad.mit.edu	37	1	115256530	115256530	+	Missense_Mutation	SNP	G	T	T	rs121913254		TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr1:115256530G>T	uc009wgu.2	-	3	435	c.181C>A	c.(181-183)CAA>AAA	p.Q61K		NM_002524	NP_002515	P01111	RASN_HUMAN	neuroblastoma RAS viral (v-ras) oncogene homolog	61	GTP.		Q -> K (in neuroblastoma cell).		activation of MAPKK activity|axon guidance|blood coagulation|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|nerve growth factor receptor signaling pathway|Ras protein signal transduction	Golgi membrane|plasma membrane	GTP binding|GTPase activity	p.Q61R(757)|p.Q61K(537)|p.Q61L(147)|p.Q61H(95)|p.Q61P(21)|p.Q61E(9)|p.Q61?(4)|p.Q61Q(3)|p.Q61_E62>HK(1)		haematopoietic_and_lymphoid_tissue(1008)|skin(956)|thyroid(334)|large_intestine(62)|NS(60)|soft_tissue(32)|lung(31)|upper_aerodigestive_tract(25)|urinary_tract(12)|liver(10)|adrenal_gland(9)|autonomic_ganglia(8)|testis(8)|central_nervous_system(8)|prostate(8)|breast(7)|biliary_tract(6)|ovary(6)|stomach(5)|pancreas(5)|endometrium(2)|kidney(2)|cervix(2)|eye(1)	2607	all_epithelial(7;5.11e-05)|all_lung(7;0.000179)|Lung NSC(6;0.00195)|Lung SC(450;0.211)	all_cancers(81;4.64e-07)|all_epithelial(167;4.2e-07)|all_lung(203;9.97e-06)|Lung NSC(69;1.74e-05)		Lung(183;0.0234)|Colorectal(144;0.0686)|COAD - Colon adenocarcinoma(174;0.111)|all cancers(265;0.112)|Epithelial(280;0.124)|LUSC - Lung squamous cell carcinoma(189;0.133)		TACTCTTCTTGTCCAGCTGTA	0.458000	Q61K(HT1080_SOFT_TISSUE)|Q61K(OCILY19_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(SKNAS_AUTONOMIC_GANGLIA)|Q61K(HCC15_LUNG)|Q61K(TYKNU_OVARY)|Q61K(SKNSH_AUTONOMIC_GANGLIA)|Q61K(HUT78_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(NCIH2087_LUNG)|Q61K(CHP212_AUTONOMIC_GANGLIA)|Q61K(HS944T_SKIN)|Q61K(M07E_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(HS936T_SKIN)|Q61K(NCIH1299_LUNG)	50	Mis		melanoma|MM|AML|thyroid				Noonan_syndrome	TSP Lung(23;0.16)|Multiple Myeloma(1;<1E-6)			55	103	---	---	---	---	4.33383e-22	6.93413e-22	0.014410	1	0
ADAM12	8038	broad.mit.edu	37	10	127737869	127737869	+	Missense_Mutation	SNP	G	A	A			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr10:127737869G>A	uc001ljk.2	-	16	2292	c.1879C>T	c.(1879-1881)CCG>TCG	p.P627S	ADAM12_uc010qul.1_Missense_Mutation_p.P578S|ADAM12_uc001ljm.2_Missense_Mutation_p.P627S|ADAM12_uc001ljn.2_Missense_Mutation_p.P624S|ADAM12_uc001ljl.3_Missense_Mutation_p.P624S	NM_003474	NP_003465	O43184	ADA12_HUMAN	ADAM metallopeptidase domain 12 isoform 1	627	Extracellular (Potential).|Cys-rich.				cell adhesion|epidermal growth factor receptor signaling pathway|myoblast fusion|proteolysis	extracellular region|integral to membrane|plasma membrane	metalloendopeptidase activity|protein binding|SH3 domain binding|zinc ion binding			breast(4)|ovary(2)|central_nervous_system(2)|upper_aerodigestive_tract(1)	9		all_epithelial(44;7.06e-05)|all_lung(145;0.00563)|Lung NSC(174;0.00834)|Colorectal(57;0.102)|all_neural(114;0.107)|Breast(234;0.22)		COAD - Colon adenocarcinoma(40;0.141)|Colorectal(40;0.216)		CCTGGGTCCGGCATGTCATCG	0.527000													5	239	---	---	---	---	0	0	0.014758	0	0
MRGPRX1	259249	broad.mit.edu	37	11	18956323	18956323	+	Silent	SNP	T	A	A			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr11:18956323T>A	uc001mpg.2	-	1	227	c.9A>T	c.(7-9)CCA>CCT	p.P3P		NM_147199	NP_671732	Q96LB2	MRGX1_HUMAN	MAS-related GPR, member X1	3	Extracellular (Potential).				acute-phase response	integral to membrane|plasma membrane	G-protein coupled receptor activity			pancreas(2)|central_nervous_system(1)	3						TTGAGATGGTTGGATCCATGC	0.423000													60	114	---	---	---	---	0	0	0.014410	0	0
RBM7	10179	broad.mit.edu	37	11	114271421	114271421	+	Missense_Mutation	SNP	C	T	T			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr11:114271421C>T	uc001pov.2	+	1	38	c.28C>T	c.(28-30)CGC>TGC	p.R10C	C11orf71_uc001pot.1_5'Flank|C11orf71_uc001pou.3_5'Flank|RBM7_uc001pow.2_Missense_Mutation_p.R10C|RBM7_uc001pox.2_5'UTR	NM_016090	NP_057174	Q9Y580	RBM7_HUMAN	RNA binding motif protein 7	10	RRM.				meiosis		nucleotide binding|protein binding|RNA binding			ovary(2)	2		all_cancers(61;5.06e-12)|all_epithelial(67;5.3e-06)|all_hematologic(158;7.68e-05)|Acute lymphoblastic leukemia(157;0.000966)|Melanoma(852;0.00153)|Medulloblastoma(222;0.0523)|all_neural(223;0.0663)|Breast(348;0.0818)|Prostate(24;0.104)		BRCA - Breast invasive adenocarcinoma(274;2.56e-06)|Epithelial(105;4.17e-05)|all cancers(92;0.000348)		GGAAGCGGATCGCACTCTCTT	0.627000													23	51	---	---	---	---	0	0	0.021523	0	0
SPRYD4	283377	broad.mit.edu	37	12	56862411	56862411	+	Silent	SNP	C	T	T			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr12:56862411C>T	uc001sli.3	+	1	111	c.36C>T	c.(34-36)TGC>TGT	p.C12C	SPRYD4_uc010sqo.1_Silent_p.C12C	NM_207344	NP_997227	Q8WW59	SPRY4_HUMAN	SPRY domain containing 4	12	B30.2/SPRY.					nucleus					0						TGCGCTTGTGCCGCTGGGGAG	0.567000													4	112	---	---	---	---	0	0	0.014758	0	0
SIPA1L1	26037	broad.mit.edu	37	14	72202102	72202102	+	Missense_Mutation	SNP	A	G	G			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr14:72202102A>G	uc001xms.2	+	20	5528	c.5180A>G	c.(5179-5181)TAC>TGC	p.Y1727C	SIPA1L1_uc001xmt.2_Missense_Mutation_p.Y1706C|SIPA1L1_uc001xmu.2_Missense_Mutation_p.Y1706C|SIPA1L1_uc001xmv.2_Missense_Mutation_p.Y1727C|SIPA1L1_uc010ttm.1_Missense_Mutation_p.Y1181C|SIPA1L1_uc001xmw.2_Missense_Mutation_p.Y492C	NM_015556	NP_056371	O43166	SI1L1_HUMAN	signal-induced proliferation-associated 1 like	1727					actin cytoskeleton reorganization|activation of Rap GTPase activity|regulation of dendritic spine morphogenesis	cell junction|cytoplasm|dendritic spine|postsynaptic density|postsynaptic membrane|synaptosome	GTPase activator activity			ovary(3)|breast(1)	4				all cancers(60;0.00169)|BRCA - Breast invasive adenocarcinoma(234;0.00912)|OV - Ovarian serous cystadenocarcinoma(108;0.0109)		ATGAAGCCTTACAGCAGGTTG	0.542000													9	79	---	---	---	---	0	0	0.004482	0	0
C15orf51	196968	broad.mit.edu	37	15	100340438	100340438	+	RNA	SNP	C	T	T			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr15:100340438C>T	uc010urx.1	-	4		c.489G>A			C15orf51_uc010ury.1_RNA|uc002bvp.2_5'Flank|C15orf51_uc010urz.1_RNA|C15orf51_uc010bow.2_RNA|uc002bvt.1_RNA	NR_003260				Homo sapiens cDNA FLJ43799 fis, clone TESTI4000288.												0						GACAGCAGCTCCGAGAAGATG	0.622000													6	10	---	---	---	---	0	0	0.021553	0	0
ZNF480	147657	broad.mit.edu	37	19	52817523	52817523	+	Missense_Mutation	SNP	G	T	T			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr19:52817523G>T	uc010ydl.1	+	3	260	c.190G>T	c.(190-192)GTC>TTC	p.V64F	ZNF480_uc002pyv.2_Intron|ZNF480_uc010ydm.1_Missense_Mutation_p.V64F|ZNF480_uc010epn.2_Intron|uc002pyw.1_Intron	NM_144684	NP_653285	Q8WV37	ZN480_HUMAN	zinc finger protein 480	64	KRAB.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	nucleic acid binding|zinc ion binding			large_intestine(1)	1				GBM - Glioblastoma multiforme(134;0.00212)|OV - Ovarian serous cystadenocarcinoma(262;0.00369)		CAGGAACCTGGTCTCCCTGGG	0.542000													34	83	---	---	---	---	1.61788e-16	2.25096e-16	0.012213	1	0
POLR1B	84172	broad.mit.edu	37	2	113332950	113332950	+	Nonsense_Mutation	SNP	C	T	T			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr2:113332950C>T	uc002thw.2	+	15	3632	c.3052C>T	c.(3052-3054)CGA>TGA	p.R1018*	POLR1B_uc010fkn.2_Nonsense_Mutation_p.R962*|POLR1B_uc002thx.2_Nonsense_Mutation_p.R879*|POLR1B_uc010fko.2_Nonsense_Mutation_p.R835*|POLR1B_uc010fkp.2_Nonsense_Mutation_p.R457*|POLR1B_uc010yxn.1_Nonsense_Mutation_p.R1056*|POLR1B_uc002thy.2_Nonsense_Mutation_p.R879*|POLR1B_uc010yxo.1_Nonsense_Mutation_p.R795*	NM_019014	NP_061887	Q9H9Y6	RPA2_HUMAN	RNA polymerase I polypeptide B isoform 1	1018					termination of RNA polymerase I transcription|transcription elongation from RNA polymerase I promoter|transcription initiation from RNA polymerase I promoter	nucleoplasm	DNA binding|DNA-directed RNA polymerase activity|metal ion binding|protein binding|ribonucleoside binding			ovary(1)	1						AACTGGAGCCCGAGACAGAGT	0.488000													25	48	---	---	---	---	0	0	0.016522	0	0
CELSR3	1951	broad.mit.edu	37	3	48699285	48699285	+	Silent	SNP	T	G	G			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr3:48699285T>G	uc003cul.2	-	1	1064	c.783A>C	c.(781-783)GCA>GCC	p.A261A	CELSR3_uc003cuf.1_Silent_p.A331A	NM_001407	NP_001398	Q9NYQ7	CELR3_HUMAN	cadherin EGF LAG seven-pass G-type receptor 3	261	Extracellular (Potential).				homophilic cell adhesion|multicellular organismal development|neuropeptide signaling pathway	integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity|protein binding			ovary(5)|upper_aerodigestive_tract(2)|central_nervous_system(2)|skin(2)	11				BRCA - Breast invasive adenocarcinoma(193;0.000292)|KIRC - Kidney renal clear cell carcinoma(197;0.00549)|Kidney(197;0.00619)		ACTCGCGGGGTGCTGAACCTG	0.726000													7	52	---	---	---	---	0	0	0.013537	0	0
YEATS2	55689	broad.mit.edu	37	3	183472085	183472085	+	Missense_Mutation	SNP	A	G	G			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr3:183472085A>G	uc003fly.2	+	11	1517	c.1322A>G	c.(1321-1323)CAG>CGG	p.Q441R		NM_018023	NP_060493	Q9ULM3	YETS2_HUMAN	YEATS domain containing 2	441					histone H3 acetylation|negative regulation of transcription from RNA polymerase II promoter	Ada2/Gcn5/Ada3 transcription activator complex	TBP-class protein binding			ovary(3)|large_intestine(1)	4	all_cancers(143;6.55e-10)|Ovarian(172;0.0303)		all cancers(12;2.38e-42)|Epithelial(37;1.9e-36)|OV - Ovarian serous cystadenocarcinoma(80;6.48e-22)			CCACAAAGTCAGGTTCCTAAT	0.448000													3	61	---	---	---	---	0	0	0.009096	0	0
FRAS1	80144	broad.mit.edu	37	4	79360116	79360116	+	Silent	SNP	C	G	G			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr4:79360116C>G	uc003hlb.2	+	40	5867	c.5427C>G	c.(5425-5427)GTC>GTG	p.V1809V	FRAS1_uc003hkw.2_Silent_p.V1809V|FRAS1_uc010ijj.1_Silent_p.V229V	NM_025074	NP_079350	Q86XX4	FRAS1_HUMAN	Fraser syndrome 1	1808	CSPG 6.|Extracellular (Potential).				cell communication	integral to membrane|plasma membrane	metal ion binding			large_intestine(5)	5						ATTTCTCTGTCTCTGACATGG	0.378000													52	94	---	---	---	---	0	0	0.014410	0	0
PTBP2	58155	broad.mit.edu	37	1	97235421	97235422	+	Frame_Shift_Ins	INS	-	A	A			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr1:97235421_97235422insA	uc001drq.2	+	4	524_525	c.278_279insA	c.(277-279)GGAfs	p.G93fs	PTBP2_uc001drn.2_Frame_Shift_Ins_p.G93fs|PTBP2_uc001dro.2_Frame_Shift_Ins_p.G93fs|PTBP2_uc010otz.1_Frame_Shift_Ins_p.G104fs|PTBP2_uc001drp.2_RNA|PTBP2_uc009wdw.2_Frame_Shift_Ins_p.G41fs|PTBP2_uc001drr.2_Frame_Shift_Ins_p.G93fs|PTBP2_uc010oua.1_Frame_Shift_Ins_p.G101fs|PTBP2_uc001dru.2_RNA|PTBP2_uc001drm.2_Frame_Shift_Ins_p.G93fs	NM_021190	NP_067013	Q9UKA9	PTBP2_HUMAN	polypyrimidine tract binding protein 2	93	RRM 1.						nucleotide binding				0		all_epithelial(167;2.95e-05)|all_lung(203;0.000396)|Lung NSC(277;0.00171)		all cancers(265;0.0582)|Epithelial(280;0.0716)|Colorectal(170;0.0879)|KIRC - Kidney renal clear cell carcinoma(1967;0.202)		ATGCTGAAAGGAAAAAATCAGG	0.356													24	56	---	---	---	---					
Unknown	0	broad.mit.edu	37	11	3552650	3552651	+	IGR	INS	-	G	G	rs34642454		TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr11:3552650_3552651insG								LOC650368 (122272 upstream) : TRPC2 (85811 downstream)																							CAGCACCCCATGGGGGGGCCCT	0.376													4	8	---	---	---	---					
Unknown	0	broad.mit.edu	37	17	20416848	20416849	+	IGR	INS	-	A	A			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr17:20416848_20416849insA								LGALS9B (46000 upstream) : CCDC144NL (349861 downstream)																							CAGGCTGAAAGAAAAAAAAAAA	0.554													2	4	---	---	---	---					
GRIN3B	116444	broad.mit.edu	37	19	1009186	1009188	+	In_Frame_Del	DEL	AGC	-	-			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr19:1009186_1009188delAGC	uc002lqo.1	+	9	2717_2719	c.2717_2719delAGC	c.(2716-2721)GAGCAG>GAG	p.Q912del	uc002lqp.1_RNA	NM_138690	NP_619635	O60391	NMD3B_HUMAN	glutamate receptor, ionotropic,	912	Cytoplasmic (Potential).				ionotropic glutamate receptor signaling pathway|protein insertion into membrane|regulation of calcium ion transport	cell junction|N-methyl-D-aspartate selective glutamate receptor complex|neuronal cell body|outer membrane-bounded periplasmic space|postsynaptic membrane	extracellular-glutamate-gated ion channel activity|glycine binding|ionotropic glutamate receptor activity|neurotransmitter receptor activity				0		Acute lymphoblastic leukemia(61;4.36e-14)|all_hematologic(61;4.84e-09)|Lung NSC(49;0.000226)|all_lung(49;0.000353)|Breast(49;0.00066)		UCEC - Uterine corpus endometrioid carcinoma (162;6.64e-05)|OV - Ovarian serous cystadenocarcinoma(105;1.09e-113)|Epithelial(107;3.79e-112)|all cancers(105;1.67e-104)|BRCA - Breast invasive adenocarcinoma(158;0.00136)|STAD - Stomach adenocarcinoma(1328;0.18)	Glycine(DB00145)|L-Glutamic Acid(DB00142)|Orphenadrine(DB01173)	CCCGAGGTGGagcagcagcagca	0.680													4	7	---	---	---	---					
Unknown	0	broad.mit.edu	37	2	206813724	206813725	+	IGR	INS	-	A	A			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr2:206813724_206813725insA								NRP2 (150868 upstream) : INO80D (44721 downstream)																							gaccctatctcaaaaaaaaaaG	0.233													3	5	---	---	---	---					
Unknown	0	broad.mit.edu	37	20	40627647	40627649	+	IGR	DEL	CTG	-	-			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr20:40627647_40627649delCTG								CHD6 (380514 upstream) : PTPRT (73744 downstream)																							CGCGGCCCGCCTGCTGCTGCTGC	0.714													2	4	---	---	---	---					
RFPL3	10738	broad.mit.edu	37	22	32752978	32752979	+	5'Flank	INS	-	G	G			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr22:32752978_32752979insG	uc003amj.2	+						RFPL3_uc010gwn.2_Intron	NM_001098535	NP_001092005	O75679	RFPL3_HUMAN	ret finger protein-like 3 isoform 1								zinc ion binding			ovary(1)	1						GGCTGGCCTGTGGGTGGGCGAG	0.624													3	5	---	---	---	---					
PPIL6	285755	broad.mit.edu	37	6	109757309	109757309	+	Frame_Shift_Del	DEL	T	-	-			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr6:109757309delT	uc003ptg.3	-	2	283	c.229delA	c.(229-231)AGGfs	p.R77fs	PPIL6_uc010kdo.2_Intron|PPIL6_uc010kdp.2_Frame_Shift_Del_p.R77fs	NM_173672	NP_775943	Q8IXY8	PPIL6_HUMAN	peptidylprolyl isomerase-like 6 isoform 1	77					protein folding		peptidyl-prolyl cis-trans isomerase activity				0		all_cancers(87;1.1e-06)|Acute lymphoblastic leukemia(125;2.66e-08)|all_hematologic(75;1.13e-06)|all_epithelial(87;0.000144)|all_lung(197;0.0221)|Colorectal(196;0.0488)|Lung SC(18;0.0548)		Epithelial(106;0.00684)|BRCA - Breast invasive adenocarcinoma(108;0.00889)|all cancers(137;0.0106)|OV - Ovarian serous cystadenocarcinoma(136;0.0259)		TCCTTTACCCTTTTTTTCTCC	0.338													7	150	---	---	---	---					
Unknown	0	broad.mit.edu	37	9	69876385	69876386	+	IGR	INS	-	TCT	TCT			TCGA-EM-A22Q-01A-11D-A17V-08	TCGA-EM-A22Q-10A-01D-A17V-08									Somatic	Phase_I	Capture				Illumina GAIIx	1f3bd45f-1011-49b9-9358-e89134bd9870	f1e73e62-79f2-4bed-8894-cd2e720817c7	g.chr9:69876385_69876386insTCT								LOC100133920 (211436 upstream) : FOXD4L5 (299323 downstream)																							TTCTTCTCTTCTCTTCTTGTTT	0.277													5	2	---	---	---	---					
