| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/BLCA/2710926/0.GDAC_clinicalDataMerger.Finished/BLCA.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_blca.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | BLCA |
| Execution Times: | |
| Submitted: | 12:05:43 12-03-13 |
| Completed: | |
| Elapsed: | 00 hrs 58 mins 56 secs |
step 1. GDAC_clinicalDataPicker [id: 340300] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/BLCA/2710926/0.GDAC_clinicalDataMerger.Finished/BLCA.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_blca.tsv |
| nodeColumn | 1 |
| outPrefix | BLCA |
| Output Files: | |
| .lsf.out | |
| BLCA.clin.merged.picked.txt | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 12:07:33 12-03-13 |
| Completed: | 12:29:29 12-03-13 |
| Elapsed: | 00 hrs 21 mins 55 secs |
step 2. GDAC_clinicalDataPickerReport [id: 340301] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | BLCA.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 12:07:33 12-03-13 |
| Completed: | 13:04:37 12-03-13 |
| Elapsed: | 00 hrs 57 mins 04 secs |