GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/COAD/2711159/0.GDAC_clinicalDataMerger.Finished/COAD.clin.merged.txt |
GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_coad.tsv |
GDAC_clinicalDataPicker1 nodeColumn | 1 |
GDAC_clinicalDataPicker1 outPrefix | COAD |
Execution Times: | |
Submitted: | 13:46:05 12-03-13 |
Completed: | |
Elapsed: | 01 hrs 13 mins 44 secs |
step 1. GDAC_clinicalDataPicker [id: 344672] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/COAD/2711159/0.GDAC_clinicalDataMerger.Finished/COAD.clin.merged.txt |
selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_coad.tsv |
nodeColumn | 1 |
outPrefix | COAD |
Output Files: | |
COAD.clin.merged.picked.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 13:46:13 12-03-13 |
Completed: | 14:22:16 12-03-13 |
Elapsed: | 00 hrs 36 mins 02 secs |
step 2. GDAC_clinicalDataPickerReport [id: 344673] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
picked | COAD.clin.merged.picked.txt |
Execution Times: | |
Submitted: | 13:46:13 12-03-13 |
Completed: | 14:59:48 12-03-13 |
Elapsed: | 01 hrs 13 mins 34 secs |