Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-AA-3866-01A-01R-1022-07	TCGA-AA-3866-01A-01R-1022-07	UNCID_287819.TCGA-AA-3866-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.1.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3941-01A-01R-1022-07	TCGA-AA-3941-01A-01R-1022-07	UNCID_287751.TCGA-AA-3941-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.3.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3980-01A-02R-1022-07	TCGA-AA-3980-01A-02R-1022-07	UNCID_287695.TCGA-AA-3980-01A-02R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.8.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3970-01A-01R-1022-07	TCGA-AA-3970-01A-01R-1022-07	UNCID_287694.TCGA-AA-3970-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.5.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3870-01A-01R-1022-07	TCGA-AA-3870-01A-01R-1022-07	UNCID_273981.TCGA-AA-3870-01A-01R-1022-07.101015_UNC6-RDR300211_00037_FC_707YUAAXX.7.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3977-01A-01R-1022-07	TCGA-AA-3977-01A-01R-1022-07	UNCID_287646.TCGA-AA-3977-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.6.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3841-01A-01R-0905-07	TCGA-AA-3841-01A-01R-0905-07	UNCID_283221.TCGA-AA-3841-01A-01R-0905-07.100810_UNC6-RDR300211_00022_FC_629L9AAXX.7.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3968-01A-01R-1022-07	TCGA-AA-3968-01A-01R-1022-07	UNCID_287760.TCGA-AA-3968-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.4.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3939-01A-01R-1022-07	TCGA-AA-3939-01A-01R-1022-07	UNCID_287741.TCGA-AA-3939-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.2.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
TCGA-AA-3979-01A-01R-1022-07	TCGA-AA-3979-01A-01R-1022-07	UNCID_287770.TCGA-AA-3979-01A-01R-1022-07.100709_UNC1-RDR301647_0011_6236JAAXX.7.trimmed.annotated.translated_to_genomic.spljxn.quantification.txt	unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0	Level_3	yes	broad.mit.edu:mirror_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data_2013030900	COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_COAD.Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data.Level_3.2013030900.0.0	yes
