Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
SKI	6497	broad.mit.edu	37	1	2234815	2234815	+	Missense_Mutation	SNP	A	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:2234815A>C	uc001aja.3	+	3	1259	c.1187A>C	c.(1186-1188)CAC>CCC	p.H396P		NM_003036	NP_003027	P12755	SKI_HUMAN	v-ski sarcoma viral oncogene homolog	396					anterior/posterior axis specification|BMP signaling pathway|bone morphogenesis|cell motility|cell proliferation|embryonic limb morphogenesis|face morphogenesis|lens morphogenesis in camera-type eye|myelination in peripheral nervous system|myotube differentiation|negative regulation of activin receptor signaling pathway|negative regulation of BMP signaling pathway|negative regulation of fibroblast proliferation|negative regulation of osteoblast differentiation|negative regulation of Schwann cell proliferation|negative regulation of transcription from RNA polymerase II promoter|negative regulation of transforming growth factor beta receptor signaling pathway|neural tube closure|nose morphogenesis|olfactory bulb development|palate development|positive regulation of DNA binding|positive regulation of transcription from RNA polymerase II promoter|positive regulation of Wnt receptor signaling pathway|protein homotrimerization|regulation of apoptosis|retina development in camera-type eye|skeletal muscle fiber development|SMAD protein signal transduction|somatic stem cell maintenance|transcription, DNA-dependent|transforming growth factor beta receptor signaling pathway	cytoplasm|PML body|transcription factor complex|transcriptional repressor complex	histone deacetylase inhibitor activity|nucleotide binding|protein domain specific binding|protein kinase binding|repressing transcription factor binding|SMAD binding|transcription corepressor activity|transcription repressor activity|ubiquitin protein ligase binding|zinc ion binding			lung(1)|central_nervous_system(1)	2	all_cancers(77;0.000139)|all_epithelial(69;4.45e-05)|all_lung(157;0.00963)|Lung NSC(156;0.0232)|Ovarian(185;0.0634)			Epithelial(90;2.14e-37)|OV - Ovarian serous cystadenocarcinoma(86;2.72e-29)|GBM - Glioblastoma multiforme(42;2.45e-08)|Colorectal(212;5.33e-05)|COAD - Colon adenocarcinoma(227;0.000228)|Kidney(185;0.00268)|BRCA - Breast invasive adenocarcinoma(365;0.00471)|STAD - Stomach adenocarcinoma(132;0.0147)|KIRC - Kidney renal clear cell carcinoma(229;0.0385)|Lung(427;0.207)		CTCTCCCCACACCTCCCGGCC	0.647000													4	56					0	0	0.003080	0	0
ZSWIM5	57643	broad.mit.edu	37	1	45484195	45484195	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:45484195G>A	uc001cnd.2	-	14	3717	c.3489C>T	c.(3487-3489)ATC>ATT	p.I1163I		NM_020883	NP_065934	Q9P217	ZSWM5_HUMAN	zinc finger, SWIM domain containing 5	1163							zinc ion binding				0	Acute lymphoblastic leukemia(166;0.155)					TGAGGTTGTCGATGAACTGGG	0.537000											OREG0013450	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	82	121					0	0	0.014410	0	0
CYP4A22	284541	broad.mit.edu	37	1	47606542	47606542	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:47606542C>T	uc001cqv.1	+	2	337	c.286C>T	c.(286-288)CGT>TGT	p.R96C	CYP4A22_uc009vyo.2_Missense_Mutation_p.R96C|CYP4A22_uc009vyp.2_Missense_Mutation_p.R96C	NM_001010969	NP_001010969	Q5TCH4	CP4AM_HUMAN	cytochrome P450, family 4, subfamily A,	96						endoplasmic reticulum membrane|microsome	alkane 1-monooxygenase activity|electron carrier activity|heme binding			skin(2)|ovary(1)|breast(1)	4						AGGCAAAGTTCGTGTCCAGCT	0.502000													46	80					0	0	0.014410	0	0
INADL	10207	broad.mit.edu	37	1	62594552	62594552	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:62594552G>A	uc001dab.2	+	41	5320	c.5206G>A	c.(5206-5208)GAT>AAT	p.D1736N	INADL_uc001dac.2_RNA|INADL_uc009wag.2_Missense_Mutation_p.D520N	NM_176877	NP_795352	Q8NI35	INADL_HUMAN	InaD-like	1736	PDZ 10.				intracellular signal transduction|tight junction assembly	apical plasma membrane|perinuclear region of cytoplasm|tight junction	protein binding			ovary(3)|skin(1)	4						GCAACCTTTGGATGGGCTGTC	0.453000													59	91					0	0	0.014410	0	0
PIGK	10026	broad.mit.edu	37	1	77672386	77672386	+	Nonsense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:77672386G>A	uc001dhk.2	-	3	223	c.178C>T	c.(178-180)CGA>TGA	p.R60*	PIGK_uc010orj.1_Intron|PIGK_uc009wbx.2_Intron|PIGK_uc001dhl.1_Nonsense_Mutation_p.R60*	NM_005482	NP_005473	Q92643	GPI8_HUMAN	phosphatidylinositol glycan anchor biosynthesis,	60	Lumenal (Potential).				attachment of GPI anchor to protein|C-terminal protein lipidation|protein thiol-disulfide exchange|proteolysis	GPI-anchor transamidase complex	cysteine-type endopeptidase activity|GPI-anchor transamidase activity|protein binding			ovary(2)|pancreas(1)	3						GCAACATGTCGATAATTAAAC	0.368000													44	78					0	0	0.014410	0	0
WDR63	126820	broad.mit.edu	37	1	85595757	85595757	+	Missense_Mutation	SNP	A	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:85595757A>C	uc001dkt.2	+	22	2685	c.2494A>C	c.(2494-2496)AAG>CAG	p.K832Q	WDR63_uc009wcl.2_Missense_Mutation_p.K793Q	NM_145172	NP_660155	Q8IWG1	WDR63_HUMAN	WD repeat domain 63	832	Potential.									upper_aerodigestive_tract(2)|ovary(2)|skin(1)	5				all cancers(265;0.00391)|Epithelial(280;0.00922)|Colorectal(170;0.166)		TGAGCAAGAAAAGAAAGAAAT	0.338000													69	90					0	0	0.014410	0	0
DPYD	1806	broad.mit.edu	37	1	98144692	98144692	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:98144692G>A	uc001drv.2	-	8	946	c.809C>T	c.(808-810)ACT>ATT	p.T270I		NM_000110	NP_000101	Q12882	DPYD_HUMAN	dihydropyrimidine dehydrogenase isoform 1	270					'de novo' pyrimidine base biosynthetic process|purine base catabolic process|thymidine catabolic process|thymine catabolic process|UMP biosynthetic process|uracil catabolic process	cytosol	4 iron, 4 sulfur cluster binding|dihydroorotate oxidase activity|dihydropyrimidine dehydrogenase (NADP+) activity|electron carrier activity|flavin adenine dinucleotide binding|metal ion binding|NADP binding|protein homodimerization activity			ovary(3)|skin(3)|breast(2)	8		all_epithelial(167;0.000185)|all_lung(203;0.00318)|Lung NSC(277;0.00994)		Colorectal(170;0.0165)|Epithelial(280;0.0526)|all cancers(265;0.104)|READ - Rectum adenocarcinoma(84;0.171)|Lung(183;0.216)	Capecitabine(DB01101)|Enfuvirtide(DB00109)	TTCTTTCAAAGTGCTAAGAGT	0.259000													3	7					0	0	0.014758	0	0
CDC14A	8556	broad.mit.edu	37	1	100949997	100949997	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:100949997G>A	uc001dtg.3	+	11	1615	c.1127G>A	c.(1126-1128)CGA>CAA	p.R376Q	CDC14A_uc009web.2_RNA|CDC14A_uc010oui.1_Missense_Mutation_p.R318Q|CDC14A_uc001dte.3_Missense_Mutation_p.R376Q|CDC14A_uc001dtf.2_Missense_Mutation_p.R376Q|CDC14A_uc009wed.1_Missense_Mutation_p.R83Q|CDC14A_uc009wee.2_Missense_Mutation_p.R376Q	NM_003672	NP_003663	Q9UNH5	CC14A_HUMAN	CDC14 homolog A isoform 1	376					cell cycle|cell division|cell proliferation	centrosome|nucleus|spindle	protein binding|protein tyrosine phosphatase activity|protein tyrosine/serine/threonine phosphatase activity			large_intestine(1)	1		all_epithelial(167;3.71e-06)|all_lung(203;0.00097)|Lung NSC(277;0.001)		Epithelial(280;0.0676)|all cancers(265;0.127)|COAD - Colon adenocarcinoma(174;0.201)|Lung(183;0.227)|Colorectal(144;0.241)		AACATGGAACGATTTGGAGAG	0.343000													18	31					0	0	0.007413	0	0
NRAS	4893	broad.mit.edu	37	1	115256530	115256530	+	Missense_Mutation	SNP	G	T	T	rs121913254		TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:115256530G>T	uc009wgu.2	-	3	435	c.181C>A	c.(181-183)CAA>AAA	p.Q61K		NM_002524	NP_002515	P01111	RASN_HUMAN	neuroblastoma RAS viral (v-ras) oncogene homolog	61	GTP.		Q -> K (in neuroblastoma cell).		activation of MAPKK activity|axon guidance|blood coagulation|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|nerve growth factor receptor signaling pathway|Ras protein signal transduction	Golgi membrane|plasma membrane	GTP binding|GTPase activity	p.Q61R(757)|p.Q61K(537)|p.Q61L(147)|p.Q61H(95)|p.Q61P(21)|p.Q61E(9)|p.Q61?(4)|p.Q61Q(3)|p.Q61_E62>HK(1)		haematopoietic_and_lymphoid_tissue(1008)|skin(956)|thyroid(334)|large_intestine(62)|NS(60)|soft_tissue(32)|lung(31)|upper_aerodigestive_tract(25)|urinary_tract(12)|liver(10)|adrenal_gland(9)|autonomic_ganglia(8)|testis(8)|central_nervous_system(8)|prostate(8)|breast(7)|biliary_tract(6)|ovary(6)|stomach(5)|pancreas(5)|endometrium(2)|kidney(2)|cervix(2)|eye(1)	2607	all_epithelial(7;5.11e-05)|all_lung(7;0.000179)|Lung NSC(6;0.00195)|Lung SC(450;0.211)	all_cancers(81;4.64e-07)|all_epithelial(167;4.2e-07)|all_lung(203;9.97e-06)|Lung NSC(69;1.74e-05)		Lung(183;0.0234)|Colorectal(144;0.0686)|COAD - Colon adenocarcinoma(174;0.111)|all cancers(265;0.112)|Epithelial(280;0.124)|LUSC - Lung squamous cell carcinoma(189;0.133)		TACTCTTCTTGTCCAGCTGTA	0.458000	Q61K(HT1080_SOFT_TISSUE)|Q61K(OCILY19_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(SKNAS_AUTONOMIC_GANGLIA)|Q61K(HCC15_LUNG)|Q61K(TYKNU_OVARY)|Q61K(SKNSH_AUTONOMIC_GANGLIA)|Q61K(HUT78_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(NCIH2087_LUNG)|Q61K(CHP212_AUTONOMIC_GANGLIA)|Q61K(HS944T_SKIN)|Q61K(M07E_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|Q61K(HS936T_SKIN)|Q61K(NCIH1299_LUNG)	50	Mis		melanoma|MM|AML|thyroid				Noonan_syndrome	TSP Lung(23;0.16)|Multiple Myeloma(1;<1E-6)			72	90					9.35569e-46	1.27964e-45	0.014410	1	0
KCNN3	3782	broad.mit.edu	37	1	154685944	154685944	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:154685944G>A	uc001ffp.2	-	7	2209	c.1895C>T	c.(1894-1896)TCC>TTC	p.S632F	KCNN3_uc001ffo.2_Missense_Mutation_p.S327F	NM_002249	NP_002240	Q9UGI6	KCNN3_HUMAN	small conductance calcium-activated potassium	637	Calmodulin-binding (By similarity).					integral to membrane	calmodulin binding			lung(1)	1	all_lung(78;2.29e-27)|all_hematologic(923;0.088)|Hepatocellular(266;0.108)|all_neural(408;0.245)		BRCA - Breast invasive adenocarcinoma(34;0.00819)			ACTCACCTTGGAAAGGTCCAC	0.552000													28	59					0	0	0.010818	0	0
THBS3	7059	broad.mit.edu	37	1	155175012	155175012	+	Nonsense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:155175012G>A	uc001fix.2	-	3	405	c.382C>T	c.(382-384)CGA>TGA	p.R128*	RAG1AP1_uc010pey.1_Intron|THBS3_uc009wqi.2_Nonsense_Mutation_p.R128*|THBS3_uc001fiz.2_Nonsense_Mutation_p.R128*|THBS3_uc001fiy.2_5'UTR|THBS3_uc010pfu.1_Intron|THBS3_uc010pfv.1_Intron|THBS3_uc001fja.2_RNA|THBS3_uc009wqj.1_Nonsense_Mutation_p.R90*	NM_007112	NP_009043	P49746	TSP3_HUMAN	thrombospondin 3 precursor	128	TSP N-terminal.				cell-matrix adhesion	extracellular region|perinuclear region of cytoplasm	calcium ion binding|heparin binding|structural molecule activity			breast(3)|ovary(2)	5	all_epithelial(22;5.72e-28)|all_lung(78;2.07e-24)|all_hematologic(923;0.0359)|Hepatocellular(266;0.0877)		Epithelial(20;3.72e-10)|all cancers(21;1.19e-09)|BRCA - Breast invasive adenocarcinoma(34;0.000752)|LUSC - Lung squamous cell carcinoma(543;0.193)			CCTCGGAGTCGCAGGAGAACT	0.622000													19	85					0	0	0.010504	0	0
ARHGEF11	9826	broad.mit.edu	37	1	156909492	156909492	+	Missense_Mutation	SNP	G	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:156909492G>C	uc001fqo.2	-	36	4864	c.3824C>G	c.(3823-3825)CCA>CGA	p.P1275R	ARHGEF11_uc010phu.1_Missense_Mutation_p.P691R|ARHGEF11_uc001fqn.2_Missense_Mutation_p.P1315R	NM_014784	NP_055599	O15085	ARHGB_HUMAN	Rho guanine nucleotide exchange factor (GEF) 11	1275					actin cytoskeleton organization|apoptosis|axon guidance|cellular component movement|cytokinesis|establishment of cell polarity|G-protein coupled receptor protein signaling pathway|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|positive regulation of transcription, DNA-dependent|regulation of cell growth|regulation of Rho protein signal transduction|Rho protein signal transduction|striated muscle contraction	cytosol|Golgi apparatus|plasma membrane	G-protein-coupled receptor binding|GTPase activator activity|Rho guanyl-nucleotide exchange factor activity|signal transducer activity			ovary(3)|skin(2)|pleura(1)|lung(1)|kidney(1)|pancreas(1)	9	all_hematologic(923;0.0839)|Hepatocellular(266;0.158)					TTCCTGCTCTGGCCGTTCCCC	0.612000													25	15					0	0	0.021523	0	0
OR10T2	128360	broad.mit.edu	37	1	158368849	158368849	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:158368849G>A	uc010pih.1	-	1	408	c.408C>T	c.(406-408)ATC>ATT	p.I136I		NM_001004475	NP_001004475	Q8NGX3	O10T2_HUMAN	olfactory receptor, family 10, subfamily T,	136	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)|central_nervous_system(1)	3	all_hematologic(112;0.0378)					TTTTGTTTATGATGAGTGTGT	0.453000													41	62					0	0	0.014410	0	0
SPTA1	6708	broad.mit.edu	37	1	158596698	158596698	+	Silent	SNP	A	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:158596698A>G	uc001fst.1	-	41	5963	c.5764T>C	c.(5764-5766)TTG>CTG	p.L1922L		NM_003126	NP_003117	P02549	SPTA1_HUMAN	spectrin, alpha, erythrocytic 1	1922	Spectrin 18.				actin filament capping|actin filament organization|axon guidance|regulation of cell shape	cytosol|intrinsic to internal side of plasma membrane|spectrin|spectrin-associated cytoskeleton	actin filament binding|calcium ion binding|structural constituent of cytoskeleton			ovary(4)|skin(2)|upper_aerodigestive_tract(1)|breast(1)	8	all_hematologic(112;0.0378)					TCCAATTGCAACTTCCAAGCA	0.468000													70	119					0	0	0.014410	0	0
DDR2	4921	broad.mit.edu	37	1	162731078	162731078	+	Missense_Mutation	SNP	T	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:162731078T>G	uc001gcf.2	+	10	1398	c.933T>G	c.(931-933)AGT>AGG	p.S311R	DDR2_uc001gcg.2_Missense_Mutation_p.S311R	NM_001014796	NP_001014796	Q16832	DDR2_HUMAN	discoidin domain receptor family, member 2	311	Extracellular (Potential).				cell adhesion	integral to plasma membrane	ATP binding|transmembrane receptor protein tyrosine kinase activity			lung(2)|central_nervous_system(2)|ovary(1)|kidney(1)	6	all_hematologic(112;0.115)		BRCA - Breast invasive adenocarcinoma(70;0.113)			CTGAAGCCAGTGAGTGGGAAC	0.522000													14	30					0	0	0.020292	0	0
C1orf129	80133	broad.mit.edu	37	1	170967503	170967503	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:170967503C>T	uc001ghg.2	+	15	1814	c.1684C>T	c.(1684-1686)CCT>TCT	p.P562S	C1orf129_uc009wvy.2_Missense_Mutation_p.P369S|C1orf129_uc010plz.1_Intron	NM_025063	NP_079339	Q5TGP6	CA129_HUMAN	hypothetical protein LOC80133 isoform 2	562							binding			pancreas(1)	1	all_hematologic(923;0.0922)|Acute lymphoblastic leukemia(37;0.181)					CGTATCTCTCCCTCTGAATGT	0.398000													28	30					0	0	0.027356	0	0
SLC9A11	284525	broad.mit.edu	37	1	173552686	173552686	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:173552686C>T	uc001giz.2	-	6	1022	c.599G>A	c.(598-600)GGA>GAA	p.G200E	SLC9A11_uc010pmq.1_RNA	NM_178527	NP_848622	Q5TAH2	S9A11_HUMAN	solute carrier family 9, member 11	200					sodium ion transport	integral to membrane	ion channel activity|solute:hydrogen antiporter activity			ovary(2)	2						CCGAAAATTTCCAAAAAAAAT	0.279000													27	33					0	0	0.021523	0	0
CACNA1E	777	broad.mit.edu	37	1	181765865	181765865	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:181765865G>A	uc001gow.2	+	46	6306	c.6141G>A	c.(6139-6141)AAG>AAA	p.K2047K	CACNA1E_uc009wxs.2_Silent_p.K1935K|CACNA1E_uc009wxt.2_Silent_p.K1316K	NM_000721	NP_000712	Q15878	CAC1E_HUMAN	calcium channel, voltage-dependent, R type,	2090	Cytoplasmic (Potential).				energy reserve metabolic process|membrane depolarization|synaptic transmission	voltage-gated calcium channel complex	voltage-gated calcium channel activity			ovary(3)|central_nervous_system(2)|pancreas(1)	6						AAGAGCGAAAGCATCTTCTCT	0.572000													16	16					0	0	0.004990	0	0
PTPRC	5788	broad.mit.edu	37	1	198682180	198682180	+	Missense_Mutation	SNP	C	T	T	rs142046206		TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:198682180C>T	uc001gur.1	+	12	1444	c.1264C>T	c.(1264-1266)CTC>TTC	p.L422F	PTPRC_uc001gus.1_Missense_Mutation_p.L374F|PTPRC_uc001gut.1_Missense_Mutation_p.L261F|PTPRC_uc009wzf.1_Missense_Mutation_p.L310F|PTPRC_uc010ppg.1_Missense_Mutation_p.L358F	NM_002838	NP_002829	P08575	PTPRC_HUMAN	protein tyrosine phosphatase, receptor type, C	422	Extracellular (Potential).|Fibronectin type-III 1.				axon guidance|B cell proliferation|B cell receptor signaling pathway|defense response to virus|immunoglobulin biosynthetic process|negative regulation of cytokine-mediated signaling pathway|negative regulation of protein kinase activity|negative regulation of T cell mediated cytotoxicity|positive regulation of antigen receptor-mediated signaling pathway|positive regulation of B cell proliferation|positive regulation of protein kinase activity|positive regulation of T cell proliferation|regulation of S phase|release of sequestered calcium ion into cytosol|T cell differentiation|T cell receptor signaling pathway	focal adhesion|integral to plasma membrane|membrane raft	protein kinase binding|transmembrane receptor protein tyrosine phosphatase activity			breast(4)|skin(3)|ovary(2)|lung(1)|kidney(1)|pancreas(1)	12						TAATTTTACCCTCTGTTATAT	0.333000													19	63					0	0	0.012319	0	0
PTPRC	5788	broad.mit.edu	37	1	198711436	198711436	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:198711436G>A	uc001gur.1	+	25	2811	c.2631G>A	c.(2629-2631)GTG>GTA	p.V877V	PTPRC_uc001gus.1_Silent_p.V829V|PTPRC_uc001gut.1_Silent_p.V716V	NM_002838	NP_002829	P08575	PTPRC_HUMAN	protein tyrosine phosphatase, receptor type, C	877	Cytoplasmic (Potential).|Tyrosine-protein phosphatase 1.				axon guidance|B cell proliferation|B cell receptor signaling pathway|defense response to virus|immunoglobulin biosynthetic process|negative regulation of cytokine-mediated signaling pathway|negative regulation of protein kinase activity|negative regulation of T cell mediated cytotoxicity|positive regulation of antigen receptor-mediated signaling pathway|positive regulation of B cell proliferation|positive regulation of protein kinase activity|positive regulation of T cell proliferation|regulation of S phase|release of sequestered calcium ion into cytosol|T cell differentiation|T cell receptor signaling pathway	focal adhesion|integral to plasma membrane|membrane raft	protein kinase binding|transmembrane receptor protein tyrosine phosphatase activity			breast(4)|skin(3)|ovary(2)|lung(1)|kidney(1)|pancreas(1)	12						AGAACAAAGTGGATGTTTATG	0.438000													55	74					0	0	0.014410	0	0
CR2	1380	broad.mit.edu	37	1	207640026	207640026	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:207640026G>A	uc001hfw.2	+	2	308	c.214G>A	c.(214-216)GAT>AAT	p.D72N	CR2_uc001hfv.2_Missense_Mutation_p.D72N|CR2_uc009xch.2_Missense_Mutation_p.D72N	NM_001877	NP_001868	P20023	CR2_HUMAN	complement component (3d/Epstein Barr virus)	72	Sushi 1.|Extracellular (Potential).				complement activation, classical pathway|innate immune response	integral to membrane|plasma membrane	complement receptor activity|protein homodimerization activity			upper_aerodigestive_tract(3)|skin(3)|urinary_tract(1)|ovary(1)	8						AGACAAAGTGGATGGAACCTG	0.413000													23	49					0	0	0.018920	0	0
EPHX1	2052	broad.mit.edu	37	1	226019497	226019497	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:226019497C>T	uc001hpk.2	+	3	281	c.201C>T	c.(199-201)ATC>ATT	p.I67I	EPHX1_uc001hpl.2_Silent_p.I67I	NM_001136018	NP_001129490	P07099	HYEP_HUMAN	epoxide hydrolase 1	67					aromatic compound catabolic process|response to toxin	endoplasmic reticulum membrane|integral to membrane|microsome	cis-stilbene-oxide hydrolase activity|epoxide hydrolase activity			ovary(3)|lung(1)	4	Breast(184;0.197)					ACCAGAGGATCGATAAGTTCC	0.488000													27	42					0	0	0.006320	0	0
TRIM67	440730	broad.mit.edu	37	1	231339639	231339639	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:231339639G>A	uc009xfn.1	+	6	1603	c.1561G>A	c.(1561-1563)GAG>AAG	p.E521K		NM_001004342	NP_001004342	Q6ZTA4	TRI67_HUMAN	tripartite motif-containing 67	521	Fibronectin type-III.					cytoplasm|cytoskeleton	zinc ion binding			ovary(2)|breast(1)|kidney(1)	4	Breast(184;0.0871)	all_cancers(173;0.189)|Prostate(94;0.167)				ACTGCAGCTGGAGAAATGCTG	0.672000													10	16					0	0	0.013537	0	0
TUBB8	347688	broad.mit.edu	37	10	93359	93359	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr10:93359C>T	uc001ifi.2	-	4	973	c.973G>A	c.(973-975)GAG>AAG	p.E325K	TUBB8_uc009xhe.2_Missense_Mutation_p.E288K|TUBB8_uc010pzs.1_Missense_Mutation_p.E253K	NM_177987	NP_817124	Q3ZCM7	TBB8_HUMAN	tubulin, beta 8 isoform 1	325					microtubule-based movement|protein polymerization	cytoplasm|microtubule	GTP binding|GTPase activity|structural molecule activity			ovary(1)	1		all_cancers(4;0.00131)|all_lung(4;0.000777)|Lung NSC(4;0.0043)|all_epithelial(10;0.0154)|Colorectal(49;0.235)		Epithelial(11;0.00341)|all cancers(11;0.00922)|OV - Ovarian serous cystadenocarcinoma(14;0.0508)|Lung(33;0.132)		TCATCCACCTCCCTCATGGGC	0.522000													48	86					0	0	0.013114	0	0
ZNF239	8187	broad.mit.edu	37	10	44052772	44052772	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr10:44052772G>A	uc001jaw.3	-	2	1409	c.756C>T	c.(754-756)ATC>ATT	p.I252I	ZNF239_uc001jax.3_Silent_p.I252I|ZNF239_uc009xmj.2_Silent_p.I252I|ZNF239_uc009xmk.2_Silent_p.I252I	NM_005674	NP_005665	Q16600	ZN239_HUMAN	zinc finger protein 239	252	C2H2-type 2.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|RNA binding|zinc ion binding				0						CTGCCTGATGGATAAGCAGAC	0.493000													48	89					0	0	0.014410	0	0
C10orf71	118461	broad.mit.edu	37	10	50532573	50532573	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr10:50532573G>A	uc010qgp.1	+	3	2322	c.1983G>A	c.(1981-1983)GAG>GAA	p.E661E		NM_199459	NP_955629	Q711Q0	CJ071_HUMAN	hypothetical protein LOC118461 isoform 2	661											0						GGGCTACAGAGAAAATGAAGA	0.552000													7	16					0	0	0.001984	0	0
CYP2C9	1559	broad.mit.edu	37	10	96707648	96707648	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr10:96707648G>A	uc001kka.3	+	4	619	c.594G>A	c.(592-594)ATG>ATA	p.M198I	CYP2C9_uc009xut.2_Missense_Mutation_p.M198I	NM_000771	NP_000762	P11712	CP2C9_HUMAN	cytochrome P450, family 2, subfamily C,	198					exogenous drug catabolic process|monocarboxylic acid metabolic process|monoterpenoid metabolic process|oxidative demethylation|steroid metabolic process|urea metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	(S)-limonene 6-monooxygenase activity|(S)-limonene 7-monooxygenase activity|4-hydroxyacetophenone monooxygenase activity|caffeine oxidase activity|drug binding|electron carrier activity|heme binding|oxygen binding|steroid hydroxylase activity			skin(4)|ovary(2)	6		Colorectal(252;0.0902)		all cancers(201;6.93e-05)	Acenocoumarol(DB01418)|Alosetron(DB00969)|Amiodarone(DB01118)|Antihemophilic Factor(DB00025)|Aprepitant(DB00673)|Bosentan(DB00559)|Carprofen(DB00821)|Carvedilol(DB01136)|Celecoxib(DB00482)|Clomipramine(DB01242)|Dapsone(DB00250)|Delavirdine(DB00705)|Desloratadine(DB00967)|Desogestrel(DB00304)|Diclofenac(DB00586)|Esomeprazole(DB00736)|Etodolac(DB00749)|Fluconazole(DB00196)|Fluoxetine(DB00472)|Flurbiprofen(DB00712)|Fluvastatin(DB01095)|Fluvoxamine(DB00176)|Formoterol(DB00983)|Gemfibrozil(DB01241)|Ginkgo biloba(DB01381)|Glibenclamide(DB01016)|Glimepiride(DB00222)|Glipizide(DB01067)|Guanfacine(DB01018)|Hydromorphone(DB00327)|Ibuprofen(DB01050)|Imipramine(DB00458)|Irbesartan(DB01029)|Ketoconazole(DB01026)|Lansoprazole(DB00448)|Losartan(DB00678)|Lumiracoxib(DB01283)|Marinol(DB00470)|Mefenamic acid(DB00784)|Meloxicam(DB00814)|Mephenytoin(DB00532)|Metronidazole(DB00916)|Miconazole(DB01110)|Midazolam(DB00683)|Montelukast(DB00471)|Nateglinide(DB00731)|Nelfinavir(DB00220)|Nicardipine(DB00622)|Oxymorphone(DB01192)|Pantoprazole(DB00213)|Paramethadione(DB00617)|Phenprocoumon(DB00946)|Phenytoin(DB00252)|Pravastatin(DB00175)|Quinidine(DB00908)|Ritonavir(DB00503)|Rosiglitazone(DB00412)|Sertraline(DB01104)|Sildenafil(DB00203)|Sulfamethoxazole(DB01015)|Suprofen(DB00870)|Tamoxifen(DB00675)|Tenoxicam(DB00469)|Terfenadine(DB00342)|Tolbutamide(DB01124)|Torasemide(DB00214)|Troleandomycin(DB01361)|Valdecoxib(DB00580)|Valsartan(DB00177)|Voriconazole(DB00582)|Warfarin(DB00682)|Zafirlukast(DB00549)|Zileuton(DB00744)	TTAACTTAATGGAAAAGTTGA	0.378000													36	38					0	0	0.015359	0	0
MUC5B	727897	broad.mit.edu	37	11	1267510	1267510	+	Missense_Mutation	SNP	A	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:1267510A>T	uc009ycr.1	+	49	11275	c.11149A>T	c.(11149-11151)ATC>TTC	p.I3717F	MUC5B_uc001ltb.2_Missense_Mutation_p.I3137F	NM_017511	NP_059981	Q9HC84	MUC5B_HUMAN	SubName: Full=Mucin 5AC, oligomeric mucus/gel-forming;	3134	7 X Cys-rich subdomain repeats.|Thr-rich.|17 X approximate tandem repeats, Ser/Thr- rich.			Missing (in Ref. 6; AAB61398).	cell adhesion	extracellular region	extracellular matrix structural constituent|protein binding				0		all_cancers(49;6.97e-08)|all_epithelial(84;3.45e-05)|Breast(177;0.000307)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.229)		BRCA - Breast invasive adenocarcinoma(625;0.00141)|Lung(200;0.0853)|LUSC - Lung squamous cell carcinoma(625;0.1)		GACGACCTGGATCCTCACAGA	0.657000													30	71					0	0	0.008361	0	0
OR51E2	81285	broad.mit.edu	37	11	4703075	4703075	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:4703075G>A	uc001lzk.2	-	2	1111	c.867C>T	c.(865-867)ATC>ATT	p.I289I		NM_030774	NP_110401	Q9H255	O51E2_HUMAN	olfactory receptor, family 51, subfamily E,	289	Helical; Name=7; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			lung(3)|ovary(2)	5		Medulloblastoma(188;0.0075)|Breast(177;0.0461)|all_neural(188;0.0577)		Epithelial(150;3e-12)|BRCA - Breast invasive adenocarcinoma(625;0.00476)|LUSC - Lung squamous cell carcinoma(625;0.2)		CACCATAGATGATGGGATTGA	0.522000													30	36					0	0	0.007291	0	0
OR51B2	79345	broad.mit.edu	37	11	5345040	5345040	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:5345040G>A	uc001mao.1	-	1	543	c.488C>T	c.(487-489)TCA>TTA	p.S163L	HBG2_uc001mak.1_Intron|HBE1_uc001mam.1_Intron	NM_033180	NP_149420	Q9Y5P1	O51B2_HUMAN	olfactory receptor, family 51, subfamily B,	163	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)|skin(1)	3		Medulloblastoma(188;0.00225)|Breast(177;0.0155)|all_neural(188;0.0212)		Epithelial(150;2.9e-09)|BRCA - Breast invasive adenocarcinoma(625;0.135)		ATATGAAAATGAAAAAAGACG	0.398000													27	27					0	0	0.027356	0	0
OR52B2	255725	broad.mit.edu	37	11	6190887	6190887	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:6190887G>A	uc010qzy.1	-	1	670	c.670C>T	c.(670-672)CTC>TTC	p.L224F		NM_001004052	NP_001004052	Q96RD2	O52B2_HUMAN	olfactory receptor, family 52, subfamily B,	224	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0		Medulloblastoma(188;0.00776)|all_neural(188;0.0652)|Breast(177;0.114)		Epithelial(150;3.69e-08)|BRCA - Breast invasive adenocarcinoma(625;0.135)		ACTGCTCGGAGGATCAGTGAG	0.498000													23	38					0	0	0.014323	0	0
TRIM3	10612	broad.mit.edu	37	11	6477849	6477849	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:6477849C>T	uc001mdh.2	-	7	1494	c.1107G>A	c.(1105-1107)CCG>CCA	p.P369P	TRIM3_uc001mdi.2_Silent_p.P369P|TRIM3_uc010raj.1_Silent_p.P250P|TRIM3_uc009yfd.2_Silent_p.P369P|TRIM3_uc010rak.1_Silent_p.P369P|TRIM3_uc001mdj.2_Silent_p.P250P	NM_006458	NP_006449	O75382	TRIM3_HUMAN	tripartite motif-containing 3	369	Filamin.				nervous system development|protein transport	early endosome	protein C-terminus binding|zinc ion binding			central_nervous_system(2)|large_intestine(1)|ovary(1)|skin(1)	5		all_lung(207;9.97e-06)|Lung NSC(207;1.74e-05)|Medulloblastoma(188;0.00225)|Breast(177;0.0204)|all_neural(188;0.0212)		Epithelial(150;9.34e-10)|Lung(200;0.0234)|LUSC - Lung squamous cell carcinoma(625;0.133)|BRCA - Breast invasive adenocarcinoma(625;0.135)		GCGTGCCGTCCGGGCCGGTGA	0.642000													33	27					0	0	0.017118	0	0
SYT9	143425	broad.mit.edu	37	11	7334696	7334696	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:7334696G>A	uc001mfe.2	+	3	805	c.568G>A	c.(568-570)GAA>AAA	p.E190K	SYT9_uc001mfd.2_RNA|SYT9_uc009yfi.2_Intron	NM_175733	NP_783860	Q86SS6	SYT9_HUMAN	synaptotagmin IX	190	Cytoplasmic (Potential).					cell junction|integral to membrane|synaptic vesicle membrane	metal ion binding|transporter activity			ovary(2)|large_intestine(1)	3				Epithelial(150;1.34e-07)|LUSC - Lung squamous cell carcinoma(625;0.0949)		TCAAAAACAGGAACAGTTGAC	0.413000													13	26					0	0	0.013537	0	0
CTR9	9646	broad.mit.edu	37	11	10794192	10794192	+	Missense_Mutation	SNP	T	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:10794192T>C	uc001mja.2	+	20	2719	c.2570T>C	c.(2569-2571)CTT>CCT	p.L857P		NM_014633	NP_055448	Q6PD62	CTR9_HUMAN	SH2 domain binding protein 1	857	Lys-rich.				histone H2B ubiquitination|histone monoubiquitination	Cdc73/Paf1 complex|nuclear speck				ovary(2)	2				all cancers(16;1.64e-07)|Epithelial(150;2.47e-07)|BRCA - Breast invasive adenocarcinoma(625;0.111)		CAGAAACTTCTTAAAGAACAG	0.413000													15	20					0	0	0.028581	0	0
LRRC4C	57689	broad.mit.edu	37	11	40137497	40137497	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:40137497C>T	uc001mxa.1	-	2	2310	c.346G>A	c.(346-348)GAA>AAA	p.E116K	LRRC4C_uc001mxc.1_Missense_Mutation_p.E112K|LRRC4C_uc001mxd.1_Missense_Mutation_p.E112K|LRRC4C_uc001mxb.1_Missense_Mutation_p.E112K	NM_020929	NP_065980	Q9HCJ2	LRC4C_HUMAN	netrin-G1 ligand precursor	116	LRR 2.				regulation of axonogenesis	integral to membrane	protein binding			ovary(4)|skin(3)|central_nervous_system(1)	8		all_lung(304;0.0575)|Lung NSC(402;0.138)				GCCCCAATTTCAATGGTTCTG	0.428000													23	33					0	0	0.012319	0	0
OR9G4	283189	broad.mit.edu	37	11	56511057	56511057	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:56511057G>A	uc010rjo.1	-	1	231	c.231C>T	c.(229-231)TTC>TTT	p.F77F		NM_001005284	NP_001005284	Q8NGQ1	OR9G4_HUMAN	olfactory receptor, family 9, subfamily G,	77	Helical; Name=2; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(2)|skin(1)	3						GATTGCCAATGAAAAAGTACA	0.413000													34	41					0	0	0.021022	0	0
OR5B21	219968	broad.mit.edu	37	11	58275040	58275040	+	Missense_Mutation	SNP	G	A	A	rs140880239	by1000genomes	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:58275040G>A	uc010rki.1	-	1	539	c.539C>T	c.(538-540)CCC>CTC	p.P180L		NM_001005218	NP_001005218	A6NL26	OR5BL_HUMAN	olfactory receptor, family 5, subfamily B,	180	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(3)	3	Esophageal squamous(5;0.0027)	Breast(21;0.0778)				CAGGAGTGGGGGAATGTCACA	0.483000													16	25					0	0	0.024245	0	0
PDE2A	5138	broad.mit.edu	37	11	72297156	72297156	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:72297156G>A	uc010rrc.1	-	14	1383	c.1140C>T	c.(1138-1140)ACC>ACT	p.T380T	PDE2A_uc001oso.2_Silent_p.T359T|PDE2A_uc010rra.1_Silent_p.T373T|PDE2A_uc001osn.2_Silent_p.T124T|PDE2A_uc010rrb.1_Silent_p.T371T|PDE2A_uc010rrd.1_Silent_p.T265T	NM_002599	NP_002590	O00408	PDE2A_HUMAN	phosphodiesterase 2A isoform 1	380					platelet activation|signal transduction	cytosol	3',5'-cyclic-AMP phosphodiesterase activity|3',5'-cyclic-GMP phosphodiesterase activity|cGMP binding|cGMP-stimulated cyclic-nucleotide phosphodiesterase activity|metal ion binding			ovary(2)|breast(1)|skin(1)	4			BRCA - Breast invasive adenocarcinoma(5;3.55e-05)		Sildenafil(DB00203)|Sulindac(DB00605)	GGAAGGCCAGGGTGCTGGTGA	0.607000											OREG0021196	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	46	181					0	0	0.014410	0	0
LAYN	143903	broad.mit.edu	37	11	111426015	111426015	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:111426015G>A	uc001plr.1	+	6	1018	c.682G>A	c.(682-684)GAA>AAA	p.E228K	LAYN_uc001plp.1_Missense_Mutation_p.E220K|LAYN_uc001plq.1_Missense_Mutation_p.E228K|LAYN_uc001pls.1_Missense_Mutation_p.E220K|LAYN_uc010rwg.1_Missense_Mutation_p.E75K|LAYN_uc010rwh.1_Missense_Mutation_p.E76K	NM_178834	NP_849156	Q6UX15	LAYN_HUMAN	layilin	228	Extracellular (Potential).					cell surface|integral to membrane|ruffle	hyaluronic acid binding|sugar binding				0		all_cancers(61;9.06e-10)|all_epithelial(67;1.34e-05)|Melanoma(852;1.74e-05)|all_hematologic(158;0.000885)|Acute lymphoblastic leukemia(157;0.000966)|Medulloblastoma(222;0.0523)|all_neural(223;0.0663)|Breast(348;0.086)		Epithelial(105;1.5e-06)|BRCA - Breast invasive adenocarcinoma(274;1.63e-06)|all cancers(92;2.45e-05)|OV - Ovarian serous cystadenocarcinoma(223;0.0476)		AGAAAGTAGAGGTATCTACAA	0.413000													8	19					0	0	0.004482	0	0
MLL	4297	broad.mit.edu	37	11	118376065	118376065	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr11:118376065G>A	uc001pta.2	+	27	9472	c.9449G>A	c.(9448-9450)AGC>AAC	p.S3150N	MLL_uc001ptb.2_Missense_Mutation_p.S3153N	NM_005933	NP_005924	Q03164	MLL1_HUMAN	myeloid/lymphoid or mixed-lineage leukemia	3150					apoptosis|embryonic hemopoiesis|histone H4-K16 acetylation|positive regulation of transcription, DNA-dependent|protein complex assembly|transcription from RNA polymerase II promoter	MLL1 complex	AT DNA binding|histone acetyl-lysine binding|histone methyltransferase activity (H3-K4 specific)|protein homodimerization activity|sequence-specific DNA binding transcription factor activity|transcription regulatory region DNA binding|unmethylated CpG binding|zinc ion binding			lung(7)|ovary(5)|kidney(5)|central_nervous_system(3)|pancreas(2)|urinary_tract(1)|breast(1)|skin(1)	25	all_hematologic(175;0.046)	all_hematologic(192;1.13e-50)|all_neural(223;3.18e-06)|Breast(348;1.07e-05)|Medulloblastoma(222;0.0425)|Hepatocellular(160;0.244)		OV - Ovarian serous cystadenocarcinoma(223;2.77e-44)|BRCA - Breast invasive adenocarcinoma(274;1.2e-11)|Lung(307;3.48e-06)|LUSC - Lung squamous cell carcinoma(976;7.92e-05)|Colorectal(284;0.144)		CCTTCTGCTAGCAAAGGATTG	0.473000			T|O	MLL|MLLT1|MLLT2|MLLT3|MLLT4|MLLT7|MLLT10|MLLT6|ELL|EPS15|AF1Q|CREBBP|SH3GL1|FNBP1|PNUTL1|MSF|GPHN|GMPS|SSH3BP1|ARHGEF12|GAS7|FOXO3A|LAF4|LCX|SEPT6|LPP|CBFA2T1|GRAF|EP300|PICALM|HEAB	AML|ALL								168	17					0	0	0.014410	0	0
PDZRN4	29951	broad.mit.edu	37	12	41949548	41949548	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:41949548G>A	uc010skn.1	+	7	822	c.754G>A	c.(754-756)GAT>AAT	p.D252N	PDZRN4_uc001rmq.3_Missense_Mutation_p.D193N|PDZRN4_uc009zjz.2_Missense_Mutation_p.D191N|PDZRN4_uc001rmr.2_Missense_Mutation_p.D78N	NM_013377	NP_037509	Q6ZMN7	PZRN4_HUMAN	PDZ domain containing RING finger 4 isoform 2	451	PDZ 2.						ubiquitin-protein ligase activity|zinc ion binding			lung(3)|skin(3)|ovary(2)|large_intestine(1)|kidney(1)|pancreas(1)	11	all_cancers(12;0.000673)	Lung NSC(34;0.0205)|all_lung(34;0.0264)				TCGAGAAGGGGATCGGATTTT	0.408000													34	47					0	0	0.025465	0	0
OR6C74	254783	broad.mit.edu	37	12	55641256	55641256	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:55641256G>A	uc010spg.1	+	1	185	c.185G>A	c.(184-186)CGA>CAA	p.R62Q		NM_001005490	NP_001005490	A6NCV1	O6C74_HUMAN	olfactory receptor, family 6, subfamily C,	62	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity	p.R62Q(1)		central_nervous_system(1)	1						TTCTTCCTCCGAAATTTCTCA	0.383000													59	73					0	0	0.014410	0	0
OR6C1	390321	broad.mit.edu	37	12	55714500	55714500	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:55714500G>A	uc010spi.1	+	1	117	c.117G>A	c.(115-117)GGG>GGA	p.G39G		NM_001005182	NP_001005182	Q96RD1	OR6C1_HUMAN	olfactory receptor, family 6, subfamily C,	39	Helical; Name=1; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(1)|ovary(1)	2						GCATCACTGGGAACCTGACCC	0.408000													30	32					0	0	0.008361	0	0
RDH16	8608	broad.mit.edu	37	12	57348854	57348854	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:57348854C>T	uc001smi.3	-	2	580	c.408G>A	c.(406-408)GTG>GTA	p.V136V	RDH16_uc009zpa.2_Intron	NM_003708	NP_003699	O75452	RDH16_HUMAN	retinol dehydrogenase 16	136	Cytoplasmic (Potential).				lipid metabolic process	endoplasmic reticulum membrane|integral to membrane|microsome	binding|electron carrier activity|retinol dehydrogenase activity				0						CCAACAAGTTCACGTCCAGTA	0.587000													33	35					0	0	0.013726	0	0
WIF1	11197	broad.mit.edu	37	12	65461507	65461507	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:65461507G>A	uc001ssk.2	-	5	747	c.602C>T	c.(601-603)CCT>CTT	p.P201L		NM_007191	NP_009122	Q9Y5W5	WIF1_HUMAN	WNT inhibitory factor 1 precursor	201	EGF-like 1.				multicellular organismal development|Wnt receptor signaling pathway	extracellular region	protein tyrosine kinase activity			ovary(2)|lung(1)|skin(1)	4			LUAD - Lung adenocarcinoma(6;0.0234)|LUSC - Lung squamous cell carcinoma(43;0.0975)	GBM - Glioblastoma multiforme(28;0.0231)		GAACCCATCAGGACACTCGCA	0.522000			T	HMGA2	pleomorphic salivary gland adenoma								11	28					0	0	0.016723	0	0
PTPRR	5801	broad.mit.edu	37	12	71139839	71139839	+	Nonsense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:71139839G>A	uc001swi.1	-	6	1182	c.766C>T	c.(766-768)CAG>TAG	p.Q256*	PTPRR_uc001swh.1_Nonsense_Mutation_p.Q11*|PTPRR_uc009zrs.2_Nonsense_Mutation_p.Q105*|PTPRR_uc010stq.1_Nonsense_Mutation_p.Q144*|PTPRR_uc010str.1_Nonsense_Mutation_p.Q105*	NM_002849	NP_002840	Q15256	PTPRR_HUMAN	protein tyrosine phosphatase, receptor type, R	256	Cytoplasmic (Potential).				in utero embryonic development	cell surface|Golgi apparatus|integral to membrane|nucleus|perinuclear region of cytoplasm|plasma membrane	protein kinase binding|transmembrane receptor protein tyrosine phosphatase activity			skin(2)|ovary(1)	3			GBM - Glioblastoma multiforme(2;5.67e-07)|Lung(24;0.00283)|OV - Ovarian serous cystadenocarcinoma(12;0.00578)|LUSC - Lung squamous cell carcinoma(43;0.132)	COAD - Colon adenocarcinoma(1;0.136)		AAGGAAAGCTGAAATCTTTCT	0.408000													10	15					0	0	0.006214	0	0
ATP2A2	488	broad.mit.edu	37	12	110781221	110781221	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:110781221C>T	uc001tqk.3	+	16	3066	c.2503C>T	c.(2503-2505)CGT>TGT	p.R835C	ATP2A2_uc001tql.3_Missense_Mutation_p.R835C|ATP2A2_uc010sxy.1_Missense_Mutation_p.R808C|ATP2A2_uc001tqn.3_5'Flank|ATP2A2_uc009zvn.2_5'Flank	NM_170665	NP_733765	P16615	AT2A2_HUMAN	ATPase, Ca++ transporting, slow twitch 2 isoform	835	Helical; Name=7; (By similarity).				ATP biosynthetic process|cell adhesion|epidermis development|platelet activation|sarcoplasmic reticulum calcium ion transport	integral to plasma membrane|microsome|platelet dense tubular network membrane|sarcoplasmic reticulum membrane	ATP binding|calcium-transporting ATPase activity|protein C-terminus binding|S100 alpha binding			ovary(3)|skin(1)	4						GCTCTTTTTCCGTTACTTGGC	0.418000													39	59					0	0	0.009718	0	0
CUX2	23316	broad.mit.edu	37	12	111785344	111785344	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:111785344G>A	uc001tsa.1	+	22	3829	c.3676G>A	c.(3676-3678)GAG>AAG	p.E1226K		NM_015267	NP_056082	O14529	CUX2_HUMAN	cut-like 2	1226	Homeobox.					nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity			ovary(3)|skin(2)|breast(1)	6						GATGCGCCGGGAGATGTTGGT	0.652000													57	75					0	0	0.014410	0	0
KSR2	283455	broad.mit.edu	37	12	118199251	118199251	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:118199251G>A	uc001two.2	-	4	519	c.464C>T	c.(463-465)CCC>CTC	p.P155L		NM_173598	NP_775869	Q6VAB6	KSR2_HUMAN	kinase suppressor of ras 2	184	Pro-rich.				intracellular signal transduction	cytoplasm|membrane	ATP binding|metal ion binding|protein serine/threonine kinase activity			lung(10)|central_nervous_system(2)|stomach(1)|large_intestine(1)|breast(1)	15	all_neural(191;0.0804)|Medulloblastoma(191;0.0922)					GGGCTCCGGGGGGCACACGGG	0.627000													34	49					0	0	0.015359	0	0
RIMBP2	23504	broad.mit.edu	37	12	130926629	130926629	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr12:130926629G>A	uc001uil.2	-	8	1381	c.1217C>T	c.(1216-1218)TCC>TTC	p.S406F	RIMBP2_uc001uim.2_Missense_Mutation_p.S314F|RIMBP2_uc001uin.1_Missense_Mutation_p.S65F	NM_015347	NP_056162	O15034	RIMB2_HUMAN	RIM-binding protein 2	406	Fibronectin type-III 2.					cell junction|synapse				upper_aerodigestive_tract(3)|ovary(3)|large_intestine(2)|central_nervous_system(2)|pancreas(1)	11	all_neural(191;0.101)|Medulloblastoma(191;0.163)	all_epithelial(31;0.213)		OV - Ovarian serous cystadenocarcinoma(86;4.29e-06)|all cancers(50;4.56e-05)|Epithelial(86;5.41e-05)		GAGCTGGGCGGAGATCTGCGT	0.622000													21	24					0	0	0.010504	0	0
LOC284232	284232	broad.mit.edu	37	13	19415742	19415742	+	RNA	SNP	T	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:19415742T>C	uc010tcj.1	-	1		c.30368A>G				NR_027995				Homo sapiens ankyrin repeat domain 20 family, member A2 pseudogene (LOC284232), non-coding RNA.												0						GCTGTTTTCCTAATCTTTCTT	0.313000													3	51					0	0	0.014758	0	0
RNF17	56163	broad.mit.edu	37	13	25435510	25435510	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:25435510C>T	uc001upr.2	+	27	3920	c.3879C>T	c.(3877-3879)CTC>CTT	p.L1293L	RNF17_uc010tdd.1_Silent_p.L1152L|RNF17_uc010aab.2_RNA|RNF17_uc010tde.1_Silent_p.L1289L|RNF17_uc001ups.2_Silent_p.L1232L|RNF17_uc010aac.2_Silent_p.L491L|RNF17_uc010aad.2_Silent_p.L345L	NM_031277	NP_112567	Q9BXT8	RNF17_HUMAN	ring finger protein 17	1293					multicellular organismal development	cytoplasm|nucleus	hydrolase activity, acting on ester bonds|nucleic acid binding|zinc ion binding			ovary(1)|skin(1)	2		Lung SC(185;0.0225)|Breast(139;0.077)		all cancers(112;0.0114)|OV - Ovarian serous cystadenocarcinoma(117;0.0311)|Epithelial(112;0.0524)		CTTGTCAGCTCCATAATACCA	0.274000													79	136					0	0	0.014410	0	0
NBEA	26960	broad.mit.edu	37	13	35747690	35747690	+	Nonsense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:35747690C>T	uc001uvb.2	+	27	4719	c.4513C>T	c.(4513-4515)CAG>TAG	p.Q1505*	NBEA_uc010abi.2_Nonsense_Mutation_p.Q193*	NM_015678	NP_056493	Q8NFP9	NBEA_HUMAN	neurobeachin	1505						cytosol|endomembrane system|plasma membrane|trans-Golgi network	protein binding			ovary(9)|large_intestine(2)	11		Breast(139;0.0141)|Lung SC(185;0.0548)|Prostate(109;0.207)		all cancers(112;1.93e-08)|Epithelial(112;1.62e-07)|BRCA - Breast invasive adenocarcinoma(63;0.00033)|OV - Ovarian serous cystadenocarcinoma(117;0.00109)|KIRC - Kidney renal clear cell carcinoma(186;0.00575)|Kidney(163;0.00656)|GBM - Glioblastoma multiforme(144;0.191)|Lung(94;0.199)		CAGTAAACCTCAGGAAGTTCC	0.358000													8	42					0	0	0.010729	0	0
FREM2	341640	broad.mit.edu	37	13	39343808	39343808	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:39343808C>T	uc001uwv.2	+	4	5813	c.5504C>T	c.(5503-5505)GCC>GTC	p.A1835V	FREM2_uc001uww.2_5'UTR	NM_207361	NP_997244	Q5SZK8	FREM2_HUMAN	FRAS1-related extracellular matrix protein 2	1835	Calx-beta 1.|Extracellular (Potential).				cell communication|homophilic cell adhesion|multicellular organismal development	integral to membrane|plasma membrane	calcium ion binding			ovary(7)|pancreas(1)|haematopoietic_and_lymphoid_tissue(1)|central_nervous_system(1)|skin(1)	11		Lung NSC(96;1.04e-07)|Prostate(109;0.00384)|Breast(139;0.00396)|Lung SC(185;0.0565)|Hepatocellular(188;0.114)		all cancers(112;3.32e-07)|Epithelial(112;1.66e-05)|OV - Ovarian serous cystadenocarcinoma(117;0.00154)|BRCA - Breast invasive adenocarcinoma(63;0.00631)|GBM - Glioblastoma multiforme(144;0.0312)		CAGACCAGGGCCACATGGCGA	0.532000													13	49					0	0	0.016723	0	0
Unknown	0	broad.mit.edu	37	13	52035102	52035102	+	RNA	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:52035102C>T	uc001vfo.1	+	1		c.2007C>T								Homo sapiens cDNA FLJ34612 fis, clone KIDNE2014170, highly similar to 40S RIBOSOMAL PROTEIN S4, X ISOFORM.																		GTCGCACCATCCGCTACACTG	0.438000													5	19					0	0	0.014758	0	0
C13orf34	79866	broad.mit.edu	37	13	73305505	73305505	+	Silent	SNP	T	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr13:73305505T>A	uc001viv.1	+	3	359	c.240T>A	c.(238-240)GCT>GCA	p.A80A	C13orf34_uc010thq.1_5'UTR|C13orf34_uc010aen.1_Silent_p.A155A|C13orf34_uc010thr.1_Intron|C13orf34_uc001viw.1_Intron	NM_024808	NP_079084	Q6PGQ7	BORA_HUMAN	aurora borealis	80					cell division|mitosis|regulation of mitosis|regulation of mitotic spindle organization|regulation of protein localization		protein kinase binding				0		Breast(118;0.0735)		GBM - Glioblastoma multiforme(99;0.000227)		ATCGTCAAGCTTTATACTTAA	0.338000													40	25					0	0	0.027894	0	0
PSMB5	5693	broad.mit.edu	37	14	23502818	23502818	+	Missense_Mutation	SNP	C	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:23502818C>A	uc001wii.2	-	2	528	c.264G>T	c.(262-264)CAG>CAT	p.Q88H	PSMB5_uc001wij.2_Missense_Mutation_p.Q88H|PSMB5_uc010tni.1_5'UTR	NM_002797	NP_002788	P28074	PSB5_HUMAN	proteasome beta 5 subunit isoform 1	88					anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process|apoptosis|DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest|G1/S transition of mitotic cell cycle|interspecies interaction between organisms|M/G1 transition of mitotic cell cycle|mRNA metabolic process|negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|regulation of apoptosis|regulation of cellular amino acid metabolic process|S phase of mitotic cell cycle|viral reproduction	cytoplasm|nucleus	protein binding|threonine-type endopeptidase activity			ovary(1)	1	all_cancers(95;3.3e-05)			GBM - Glioblastoma multiforme(265;0.0121)	Bortezomib(DB00188)	TCTTCACCGTCTGGGAGGCAA	0.552000													23	21					3.01185e-09	4.01985e-09	0.021523	1	0
Unknown	0	broad.mit.edu	37	14	31290983	31290983	+	RNA	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:31290983G>A	uc001wqo.2	+	1		c.351G>A								full-length cDNA clone CS0DC024YB05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human).																		AAGAAGCCAAGATCAAGTTTG	0.413000													3	8					0	0	0.004672	0	0
NIN	51199	broad.mit.edu	37	14	51223836	51223836	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:51223836G>A	uc001wym.2	-	18	4103	c.3912C>T	c.(3910-3912)TTC>TTT	p.F1304F	NIN_uc001wyi.2_Silent_p.F1304F|NIN_uc001wyj.2_Intron|NIN_uc001wyk.2_Intron|NIN_uc010tqp.1_Silent_p.F1310F|NIN_uc001wyo.2_Silent_p.F1304F	NM_182946	NP_891991	Q8N4C6	NIN_HUMAN	ninein isoform 5	1304	Potential.				centrosome localization	centrosome|microtubule	calcium ion binding|GTP binding|protein binding			skin(3)|ovary(1)|kidney(1)|central_nervous_system(1)	6	all_epithelial(31;0.00244)|Breast(41;0.127)					CCAGGCTGAGGAATGTTTCAG	0.428000			T	PDGFRB	MPD								50	62					0	0	0.014410	0	0
GPR137C	283554	broad.mit.edu	37	14	53066835	53066835	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:53066835C>T	uc001wzu.3	+	3	493	c.493C>T	c.(493-495)CTA>TTA	p.L165L	GPR137C_uc001wzt.3_Silent_p.L165L	NM_001099652	NP_001093122	Q8N3F9	G137C_HUMAN	G protein-coupled receptor 137C	165	Cytoplasmic (Potential).					integral to membrane					0	Breast(41;0.0716)					TTTCAGAATTCTACTGCATTT	0.333000													44	45					0	0	0.011902	0	0
PLEKHH1	57475	broad.mit.edu	37	14	68028700	68028700	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:68028700C>T	uc001xjl.1	+	6	595	c.453C>T	c.(451-453)AGC>AGT	p.S151S		NM_020715	NP_065766	Q9ULM0	PKHH1_HUMAN	pleckstrin homology domain containing, family H	151	Potential.					cytoskeleton	binding				0				all cancers(60;0.000771)|OV - Ovarian serous cystadenocarcinoma(108;0.00502)|BRCA - Breast invasive adenocarcinoma(234;0.011)		ATCTGAAAAGCCATAATCAGC	0.458000													26	26					0	0	0.027356	0	0
NUMB	8650	broad.mit.edu	37	14	73783131	73783131	+	Splice_Site	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:73783131C>T	uc001xny.1	-	6	522	c.202_splice	c.e6-1	p.E68_splice	NUMB_uc010aro.1_Splice_Site_p.E68_splice|NUMB_uc010arp.1_Intron|NUMB_uc010arq.1_Splice_Site_p.E68_splice|NUMB_uc010arr.1_Intron|NUMB_uc001xoa.1_Splice_Site_p.E68_splice|NUMB_uc001xnz.1_Intron|NUMB_uc001xob.1_Intron|NUMB_uc001xod.1_Splice_Site_p.E68_splice|NUMB_uc001xoc.1_Splice_Site_p.E68_splice|NUMB_uc010ars.1_Intron|NUMB_uc001xof.1_Intron|NUMB_uc001xog.2_Intron|NUMB_uc001xoh.1_Intron	NM_001005743	NP_001005743	P49757	NUMB_HUMAN	numb homolog isoform 1						axon guidance|lateral ventricle development|neuroblast division in subventricular zone|positive regulation of neurogenesis	integral to plasma membrane				ovary(2)|central_nervous_system(1)|skin(1)	4				BRCA - Breast invasive adenocarcinoma(234;0.00471)|OV - Ovarian serous cystadenocarcinoma(108;0.161)		ACTTCCTTTCCTGGAGGAACA	0.413000													25	39					0	0	0.027356	0	0
COQ6	51004	broad.mit.edu	37	14	74422197	74422197	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:74422197C>T	uc001xph.2	+	3	422	c.342C>T	c.(340-342)GCC>GCT	p.A114A	COQ6_uc001xpe.2_Intron|COQ6_uc001xpf.2_Intron|COQ6_uc010tuk.1_Silent_p.A89A|COQ6_uc010tul.1_Intron|COQ6_uc010tum.1_Silent_p.A114A|COQ6_uc010tun.1_Intron|COQ6_uc001xpg.2_Silent_p.A114A	NM_182476	NP_872282	Q9Y2Z9	COQ6_HUMAN	coenzyme Q6 homolog isoform a	114					ubiquinone biosynthetic process	mitochondrion	flavin adenine dinucleotide binding|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen				0				BRCA - Breast invasive adenocarcinoma(234;0.00337)		GATACAGAGCCTTTCGGCGAA	0.458000													48	57					0	0	0.014410	0	0
AK7	122481	broad.mit.edu	37	14	96949519	96949519	+	Missense_Mutation	SNP	T	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr14:96949519T>A	uc001yfn.2	+	16	1981	c.1937T>A	c.(1936-1938)GTG>GAG	p.V646E		NM_152327	NP_689540	Q96M32	KAD7_HUMAN	adenylate kinase 7	646	Potential.|Glu-rich.				cell projection organization	cytosol	adenylate kinase activity|ATP binding|cytidylate kinase activity			ovary(1)	1		all_cancers(154;0.0482)|all_epithelial(191;0.128)|Melanoma(154;0.155)		Epithelial(152;0.134)|COAD - Colon adenocarcinoma(157;0.228)		CAGGAGGCCGTGGAGATGGCA	0.592000													6	14					0	0	0.021553	0	0
Unknown	0	broad.mit.edu	37	15	20495408	20495408	+	RNA	SNP	G	A	A	rs2954587	by1000genomes	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:20495408G>A	uc001ytf.1	+	5		c.611G>A								full-length cDNA clone CS0DI026YN18 of Placenta Cot 25-normalized of Homo sapiens (human).																		TCTGTGTGAGGAAAATGAATC	0.388000													20	98					0	0	0.007413	0	0
MKRN3	7681	broad.mit.edu	37	15	23811097	23811097	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:23811097C>T	uc001ywh.3	+	1	644	c.168C>T	c.(166-168)GCC>GCT	p.A56A	MKRN3_uc001ywi.2_Silent_p.A56A|MKRN3_uc010ayi.1_Silent_p.A56A	NM_005664	NP_005655	Q13064	MKRN3_HUMAN	makorin ring finger protein 3	56						ribonucleoprotein complex	ligase activity|nucleic acid binding|zinc ion binding			lung(6)|large_intestine(2)|ovary(2)	10		all_cancers(20;8.44e-25)|all_epithelial(15;3.69e-22)|Lung NSC(15;2.96e-18)|all_lung(15;2.8e-17)|Breast(32;0.000353)|Colorectal(260;0.14)		all cancers(64;3.02e-06)|Epithelial(43;1.94e-05)|BRCA - Breast invasive adenocarcinoma(123;0.0012)		GGGGCTGGGCCCCCTTCCCTG	0.687000													12	28					0	0	0.010729	0	0
OTUD7A	161725	broad.mit.edu	37	15	31776565	31776565	+	Missense_Mutation	SNP	G	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:31776565G>C	uc001zfq.2	-	11	1806	c.1713C>G	c.(1711-1713)AGC>AGG	p.S571R	OTUD7A_uc001zfr.2_Missense_Mutation_p.S578R	NM_130901	NP_570971	Q8TE49	OTU7A_HUMAN	OTU domain containing 7A	571						cytoplasm|nucleus	cysteine-type peptidase activity|DNA binding|zinc ion binding			pancreas(1)|skin(1)	2		all_lung(180;1.6e-09)		all cancers(64;2.44e-19)|Epithelial(43;6.82e-14)|GBM - Glioblastoma multiforme(186;1.49e-05)|BRCA - Breast invasive adenocarcinoma(123;0.00189)|Lung(196;0.208)		ACTCCTCCTTGCTGCCCTTGC	0.692000													11	17					0	0	0.016723	0	0
ARHGAP11A	9824	broad.mit.edu	37	15	32929996	32929996	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:32929996C>T	uc001zgy.1	+	12	3744	c.3022C>T	c.(3022-3024)CCT>TCT	p.P1008S	ARHGAP11A_uc010ubw.1_Missense_Mutation_p.P819S|ARHGAP11A_uc010ubx.1_Missense_Mutation_p.P819S	NM_014783	NP_055598	Q6P4F7	RHGBA_HUMAN	Rho GTPase activating protein 11A isoform 1	1008					regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol	GTPase activator activity			skin(3)|breast(2)|urinary_tract(1)	6		all_lung(180;1.3e-11)		all cancers(64;3.34e-21)|Epithelial(43;2.64e-15)|GBM - Glioblastoma multiforme(186;5.17e-06)|BRCA - Breast invasive adenocarcinoma(123;0.00112)|Lung(196;0.227)		TCCAAAACATCCTATCGGAAA	0.353000													11	15					0	0	0.008291	0	0
CASC5	57082	broad.mit.edu	37	15	40901081	40901081	+	Nonsense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:40901081C>T	uc010bbs.1	+	5	333	c.172C>T	c.(172-174)CGA>TGA	p.R58*	CASC5_uc010ucq.1_5'UTR|CASC5_uc001zme.2_Nonsense_Mutation_p.R58*|CASC5_uc010bbt.1_Nonsense_Mutation_p.R58*	NM_170589	NP_733468	Q8NG31	CASC5_HUMAN	cancer susceptibility candidate 5 isoform 1	58	Interaction with BUB1 and BUB1B.				acrosome assembly|attachment of spindle microtubules to kinetochore|cell division|CenH3-containing nucleosome assembly at centromere|mitotic prometaphase|spindle assembly checkpoint	acrosomal vesicle|condensed chromosome kinetochore|cytosol|nucleoplasm	protein binding			breast(3)|central_nervous_system(1)|skin(1)	5		all_cancers(109;2.03e-18)|all_epithelial(112;4.26e-15)|Lung NSC(122;1.12e-10)|all_lung(180;2.59e-09)|Melanoma(134;0.0574)|Ovarian(310;0.0822)|Colorectal(260;0.0946)		GBM - Glioblastoma multiforme(113;4.99e-05)|BRCA - Breast invasive adenocarcinoma(123;0.0861)|COAD - Colon adenocarcinoma(120;0.211)		AAACTCTCGTCGAGTCAGCTT	0.313000													24	29					0	0	0.024334	0	0
SLC28A2	9153	broad.mit.edu	37	15	45561731	45561731	+	Missense_Mutation	SNP	T	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:45561731T>A	uc001zva.2	+	14	1629	c.1564T>A	c.(1564-1566)TCT>ACT	p.S522T		NM_004212	NP_004203	O43868	S28A2_HUMAN	solute carrier family 28 (sodium-coupled	522					nucleobase, nucleoside and nucleotide metabolic process	integral to plasma membrane|membrane fraction	nucleoside binding|nucleoside:sodium symporter activity|purine nucleoside transmembrane transporter activity			ovary(4)	4		all_cancers(109;8.53e-07)|all_epithelial(112;1.39e-05)|Lung NSC(122;8.3e-05)|all_lung(180;0.000547)|Melanoma(134;0.0417)		all cancers(107;3.77e-16)|GBM - Glioblastoma multiforme(94;2.71e-06)		ACAGTGGATTTCTGTAAGTGA	0.438000													17	17					0	0	0.028581	0	0
ZSCAN2	54993	broad.mit.edu	37	15	85165085	85165085	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:85165085G>A	uc002bkr.2	+	3	1885	c.1659G>A	c.(1657-1659)TTG>TTA	p.L553L	ZSCAN2_uc010bmz.1_Silent_p.L551L|ZSCAN2_uc010bna.2_Silent_p.L403L|ZSCAN2_uc010uox.1_Intron|ZSCAN2_uc010uoy.1_Intron|ZSCAN2_uc010uoz.1_Intron	NM_181877	NP_870992	Q7Z7L9	ZSCA2_HUMAN	zinc finger protein 29 isoform 1	553					cell differentiation|multicellular organismal development|spermatogenesis|viral reproduction	nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(1)|central_nervous_system(1)	2				UCEC - Uterine corpus endometrioid carcinoma (272;0.168)|all cancers(203;5.43e-22)		GAGCCCATTTGGGAGACAAGC	0.567000													56	77					0	0	0.014410	0	0
MCTP2	55784	broad.mit.edu	37	15	95019952	95019952	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:95019952G>A	uc002btj.2	+	21	2563	c.2498G>A	c.(2497-2499)CGA>CAA	p.R833Q	MCTP2_uc010boj.2_Missense_Mutation_p.R562Q|MCTP2_uc010bok.2_Missense_Mutation_p.R778Q|MCTP2_uc002btl.2_Missense_Mutation_p.R421Q	NM_018349	NP_060819	Q6DN12	MCTP2_HUMAN	multiple C2 domains, transmembrane 2 isoform 1	833					calcium-mediated signaling	integral to membrane|membrane fraction	calcium ion binding			ovary(1)|pancreas(1)|skin(1)	3	Lung NSC(78;0.0821)|all_lung(78;0.148)		BRCA - Breast invasive adenocarcinoma(143;0.0323)|OV - Ovarian serous cystadenocarcinoma(32;0.0593)			AAGAAGCTTCGAAATCCCTAT	0.284000													29	47					0	0	0.012213	0	0
OR4F6	390648	broad.mit.edu	37	15	102346044	102346044	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr15:102346044G>A	uc010utr.1	+	1	122	c.122G>A	c.(121-123)GGA>GAA	p.G41E		NM_001005326	NP_001005326	Q8NGB9	OR4F6_HUMAN	olfactory receptor, family 4, subfamily F,	41	Helical; Name=1; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)	1	Lung NSC(78;0.000991)|all_lung(78;0.00128)|Melanoma(26;0.00505)		OV - Ovarian serous cystadenocarcinoma(32;0.00039)|Lung(145;0.17)|LUSC - Lung squamous cell carcinoma(107;0.187)			AGCCTGATGGGAAATCTCCTC	0.483000													109	150					0	0	0.014410	0	0
ARMC5	79798	broad.mit.edu	37	16	31476161	31476161	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:31476161C>T	uc002ecc.2	+	4	2346	c.1817C>T	c.(1816-1818)CCG>CTG	p.P606L	ARMC5_uc010vfn.1_Missense_Mutation_p.P701L|ARMC5_uc010vfo.1_Missense_Mutation_p.P638L|ARMC5_uc002eca.3_Missense_Mutation_p.P606L|ARMC5_uc010vfp.1_Missense_Mutation_p.P414L|ARMC5_uc002ecb.2_Missense_Mutation_p.P606L	NM_001105247	NP_001098717	Q96C12	ARMC5_HUMAN	armadillo repeat containing 5 isoform a	606							binding			pancreas(1)	1						GACGATTGGCCGGCACCACGT	0.701000													11	11					0	0	0.016723	0	0
C16orf78	123970	broad.mit.edu	37	16	49430546	49430546	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:49430546G>A	uc002efr.2	+	4	650	c.607G>A	c.(607-609)GAA>AAA	p.E203K		NM_144602	NP_653203	Q8WTQ4	CP078_HUMAN	hypothetical protein LOC123970	203										central_nervous_system(1)	1						ACCTAAGATGGAAACCATGAG	0.552000													16	24					0	0	0.004990	0	0
CDH8	1006	broad.mit.edu	37	16	61935342	61935342	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:61935342G>A	uc002eog.1	-	3	540	c.288C>T	c.(286-288)ATC>ATT	p.I96I		NM_001796	NP_001787	P55286	CADH8_HUMAN	cadherin 8, type 2 preproprotein	96	Extracellular (Potential).|Cadherin 1.				adherens junction organization|cell junction assembly|homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(6)|skin(2)|breast(1)	9		Ovarian(137;0.0799)|Melanoma(118;0.16)		UCEC - Uterine corpus endometrioid carcinoma (183;0.196)|Epithelial(162;0.0155)|all cancers(182;0.0305)|OV - Ovarian serous cystadenocarcinoma(108;0.0499)|BRCA - Breast invasive adenocarcinoma(181;0.249)		GGATATACTTGATTTTTTTGC	0.378000													17	39					0	0	0.004990	0	0
HYDIN	54768	broad.mit.edu	37	16	70891771	70891771	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:70891771G>A	uc002ezr.2	-	72	12257	c.12129C>T	c.(12127-12129)ATC>ATT	p.I4043I	HYDIN_uc010cfy.2_RNA	NM_032821	NP_116210	Q4G0P3	HYDIN_HUMAN	hydrocephalus inducing isoform a	4044										ovary(1)|skin(1)	2		Ovarian(137;0.0654)				ACTGGAACACGATCTAACAAG	0.478000													12	23					0	0	0.010729	0	0
RFWD3	55159	broad.mit.edu	37	16	74685906	74685906	+	Silent	SNP	A	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:74685906A>G	uc002fda.2	-	3	731	c.633T>C	c.(631-633)TCT>TCC	p.S211S	RFWD3_uc010cgq.2_Silent_p.S211S	NM_018124	NP_060594	Q6PCD5	RFWD3_HUMAN	ring finger and WD repeat domain 3	211					DNA repair|mitotic cell cycle G1/S transition DNA damage checkpoint|response to ionizing radiation	nucleus	MDM2 binding|p53 binding|ubiquitin-protein ligase activity|zinc ion binding			lung(2)|breast(1)	3						CAGAACTACTAGACACCTGCA	0.468000													44	67					0	0	0.008740	0	0
DEF8	54849	broad.mit.edu	37	16	90025426	90025426	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr16:90025426C>T	uc002fpn.1	+	6	649	c.560C>T	c.(559-561)CCC>CTC	p.P187L	DEF8_uc002fpl.2_Missense_Mutation_p.P126L|DEF8_uc002fpm.2_Missense_Mutation_p.P126L|DEF8_uc002fpo.1_Missense_Mutation_p.P126L|DEF8_uc002fpp.1_Missense_Mutation_p.P116L|DEF8_uc010vpq.1_Missense_Mutation_p.P66L|DEF8_uc010vpr.1_Missense_Mutation_p.P126L	NM_207514	NP_997397	Q6ZN54	DEFI8_HUMAN	differentially expressed in FDCP 8 isoform 1	187					intracellular signal transduction		zinc ion binding			central_nervous_system(1)	1		all_cancers(9;7.59e-13)|Lung NSC(15;1.56e-06)|all_lung(18;2.18e-06)|all_neural(9;0.0019)|all_hematologic(23;0.0194)		BRCA - Breast invasive adenocarcinoma(80;0.0274)		CTGCAGGACCCCAATGAGGAT	0.542000													28	89					0	0	0.008361	0	0
SLC13A5	284111	broad.mit.edu	37	17	6599122	6599122	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:6599122C>T	uc002gdj.2	-	7	1066	c.978G>A	c.(976-978)CTG>CTA	p.L326L	SLC13A5_uc010vtf.1_Silent_p.L326L|SLC13A5_uc010clq.2_Silent_p.L283L|SLC13A5_uc002gdk.2_Silent_p.L309L|SLC13A5_uc002gdl.1_Silent_p.L308L	NM_177550	NP_808218	Q86YT5	S13A5_HUMAN	solute carrier family 13, member 5 isoform a	326	Helical; (Potential).					integral to membrane	citrate transmembrane transporter activity				0						ACAGGATGACCAGCAGGAAGA	0.567000													83	19					0	0	0.014410	0	0
PER1	5187	broad.mit.edu	37	17	8053945	8053945	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:8053945G>A	uc002gkd.2	-	2	318	c.80C>T	c.(79-81)TCC>TTC	p.S27F	PER1_uc010vuq.1_RNA|PER1_uc010vur.1_Intron|PER1_uc010vus.1_Missense_Mutation_p.S27F	NM_002616	NP_002607	O15534	PER1_HUMAN	period 1	27					circadian rhythm|entrainment of circadian clock|negative regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleus	signal transducer activity			lung(2)|breast(2)|skin(2)|large_intestine(1)|ovary(1)|kidney(1)	9						GGGCCCAGGGGATGGGACGCC	0.647000			T	ETV6	AML|CMML			Other_conserved_DNA_damage_response_genes					46	44					0	0	0.011902	0	0
SSH2	85464	broad.mit.edu	37	17	27959023	27959023	+	Missense_Mutation	SNP	G	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:27959023G>C	uc002heo.1	-	15	3108	c.3108C>G	c.(3106-3108)AGC>AGG	p.S1036R	SSH2_uc010wbh.1_Missense_Mutation_p.S1063R	NM_033389	NP_203747	Q76I76	SSH2_HUMAN	slingshot 2	1036					actin cytoskeleton organization|regulation of actin polymerization or depolymerization|regulation of axonogenesis|regulation of lamellipodium assembly	cytoplasm|cytoskeleton	actin binding|protein tyrosine phosphatase activity|protein tyrosine/serine/threonine phosphatase activity			skin(2)	2						CTTGCTCTCCGCTCTTCTCAC	0.478000													48	65					0	0	0.014410	0	0
HNF1B	6928	broad.mit.edu	37	17	36064997	36064997	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:36064997G>A	uc002hok.3	-	6	1487	c.1266C>T	c.(1264-1266)CTC>CTT	p.L422L	HNF1B_uc010wdi.1_Silent_p.L396L	NM_000458	NP_000449	P35680	HNF1B_HUMAN	hepatocyte nuclear factor 1-beta isoform 1	422					endocrine pancreas development|genitalia development|kidney development|positive regulation of transcription initiation from RNA polymerase II promoter|positive regulation of transcription, DNA-dependent|pronephric nephron tubule development|regulation of pronephros size	nucleus	DNA binding|protein homodimerization activity|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity			ovary(3)	3		Breast(25;0.00765)|Ovarian(249;0.15)	STAD - Stomach adenocarcinoma(1;0.0142)			TATGGTGGGAGAGGCTGTGGA	0.468000									Hereditary_Prostate_Cancer				169	254					0	0	0.014410	0	0
HEXIM2	124790	broad.mit.edu	37	17	43246477	43246478	+	Missense_Mutation	DNP	GG	AA	AA			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:43246477_43246478GG>AA	uc002iih.1	+	4	401_402	c.162_163GG>AA	c.(160-165)GAGGAT>GAAAAT	p.D55N	HEXIM2_uc010daf.1_Missense_Mutation_p.D77N|HEXIM2_uc002iii.1_Missense_Mutation_p.D55N|HEXIM2_uc002iij.1_Missense_Mutation_p.D55N|uc002iik.1_RNA	NM_144608	NP_653209	Q96MH2	HEXI2_HUMAN	hexamthylene bis-acetamide inducible 2	55					negative regulation of cyclin-dependent protein kinase activity|negative regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent	cytoplasm|nucleus	cyclin-dependent protein kinase inhibitor activity|protein binding|snRNA binding				0						GCCACTCAGAGGATGAAGATCT	0.663000													65	104					0	0	0.004672	0	0
LPO	4025	broad.mit.edu	37	17	56342209	56342209	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:56342209C>T	uc002ivt.2	+	10	1709	c.1393C>T	c.(1393-1395)CGC>TGC	p.R465C	LPO_uc010wns.1_Missense_Mutation_p.R406C|LPO_uc010dcp.2_Missense_Mutation_p.R382C|LPO_uc010dcq.2_Missense_Mutation_p.R136C|LPO_uc010dcr.2_Missense_Mutation_p.R28C	NM_006151	NP_006142	P22079	PERL_HUMAN	lactoperoxidase isoform 1 preproprotein	465					hydrogen peroxide catabolic process	extracellular space	heme binding|peroxidase activity			ovary(1)|breast(1)	2						CTTCGCCTTCCGCTTTGGCCA	0.517000													22	56					0	0	0.010504	0	0
MPO	4353	broad.mit.edu	37	17	56350985	56350985	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:56350985C>T	uc002ivu.1	-	9	1588	c.1411G>A	c.(1411-1413)GCC>ACC	p.A471T		NM_000250	NP_000241	P05164	PERM_HUMAN	myeloperoxidase	471					anti-apoptosis|hydrogen peroxide catabolic process|low-density lipoprotein particle remodeling	extracellular space|lysosome|nucleus|stored secretory granule	chromatin binding|heme binding|heparin binding|peroxidase activity			ovary(2)|large_intestine(1)|pancreas(1)	4					Cefdinir(DB00535)	TTCCTCATGGCCGTTGGCCCC	0.572000													76	79					0	0	0.014410	0	0
ACE	1636	broad.mit.edu	37	17	61562671	61562671	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:61562671G>A	uc002jau.1	+	13	2018	c.1996G>A	c.(1996-1998)GAG>AAG	p.E666K	ACE_uc010ddu.1_Missense_Mutation_p.E483K|ACE_uc002jav.1_Missense_Mutation_p.E92K|ACE_uc010ddv.1_5'UTR|ACE_uc010wpj.1_Missense_Mutation_p.E92K|ACE_uc002jaw.1_RNA|ACE_uc010wpk.1_5'UTR	NM_000789	NP_000780	P12821	ACE_HUMAN	angiotensin I converting enzyme 1 isoform 1	666	Extracellular (Potential).|Peptidase M2 2.				arachidonic acid secretion|hormone catabolic process|kidney development|peptide catabolic process|regulation of smooth muscle cell migration	endosome|external side of plasma membrane|extracellular space|integral to membrane|membrane fraction|plasma membrane	actin binding|bradykinin receptor binding|carboxypeptidase activity|chloride ion binding|drug binding|metallopeptidase activity|peptidyl-dipeptidase activity|zinc ion binding			ovary(2)|upper_aerodigestive_tract(1)|pancreas(1)	4					Benazepril(DB00542)|Captopril(DB01197)|Deserpidine(DB01089)|Enalapril(DB00584)|Fosinopril(DB00492)|Lisinopril(DB00722)|Moexipril(DB00691)|Perindopril(DB00790)|Quinapril(DB00881)|Ramipril(DB00178)|Rescinnamine(DB01180)|Spirapril(DB01348)|Trandolapril(DB00519)	GGTGTGGAACGAGTATGCCGA	0.562000													17	41					0	0	0.028581	0	0
SDK2	54549	broad.mit.edu	37	17	71348646	71348646	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:71348646G>A	uc010dfm.2	-	41	5724	c.5724C>T	c.(5722-5724)TTC>TTT	p.F1908F	SDK2_uc002jjt.3_Silent_p.F1048F	NM_001144952	NP_001138424	Q58EX2	SDK2_HUMAN	sidekick 2	1908	Fibronectin type-III 13.|Extracellular (Potential).				cell adhesion	integral to membrane				ovary(2)	2						TGGGGGTGCCGAAACCATAGT	0.647000													24	14					0	0	0.027356	0	0
CSNK1D	1453	broad.mit.edu	37	17	80213335	80213335	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr17:80213335G>A	uc002kej.2	-	3	622	c.306C>T	c.(304-306)CTC>CTT	p.L102L	SLC16A3_uc002kee.2_Intron|CSNK1D_uc002kef.2_Silent_p.L102L|CSNK1D_uc002kei.2_Silent_p.L102L|CSNK1D_uc010wvj.1_5'UTR|CSNK1D_uc002keh.2_5'Flank|CSNK1D_uc010dim.1_5'Flank	NM_001893	NP_001884	P48730	KC1D_HUMAN	casein kinase 1, delta isoform 1	102	Protein kinase.				circadian regulation of gene expression|DNA repair|G2/M transition of mitotic cell cycle|positive regulation of canonical Wnt receptor signaling pathway|positive regulation of proteasomal ubiquitin-dependent protein catabolic process|positive regulation of protein phosphorylation|regulation of circadian rhythm|Wnt receptor signaling pathway	centrosome|cytosol|nucleus	ATP binding|protein binding|protein serine/threonine kinase activity			breast(2)	2	Breast(20;0.00136)|all_neural(118;0.0804)|Lung NSC(278;0.128)|all_lung(278;0.145)|Ovarian(332;0.227)		OV - Ovarian serous cystadenocarcinoma(97;0.00463)|BRCA - Breast invasive adenocarcinoma(99;0.0155)			GGACGGTTTTGAGGCTGAATT	0.542000													36	78					0	0	0.023175	0	0
ANKRD12	23253	broad.mit.edu	37	18	9281083	9281083	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr18:9281083C>T	uc002knv.2	+	13	6405	c.6148C>T	c.(6148-6150)CTT>TTT	p.L2050F	ANKRD12_uc002knw.2_Missense_Mutation_p.L2027F|ANKRD12_uc002knx.2_Missense_Mutation_p.L2027F	NM_015208	NP_056023	Q6UB98	ANR12_HUMAN	ankyrin repeat domain 12 isoform 1	2050						nucleus				ovary(2)|central_nervous_system(1)	3						TTATGTTCCCCTTGTTGATGT	0.418000													35	93					0	0	0.023175	0	0
TXNDC2	84203	broad.mit.edu	37	18	9887014	9887014	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr18:9887014C>T	uc002koi.3	+	2	987	c.538C>T	c.(538-540)CCC>TCC	p.P180S	TXNDC2_uc010wzq.1_Intron|TXNDC2_uc002koh.3_Missense_Mutation_p.P113S	NM_001098529	NP_001091999	Q86VQ3	TXND2_HUMAN	thioredoxin domain-containing 2 isoform 2	180	22 X 15 AA approximate tandem repeat of Q-P-K-X-G-D-I-P-K-S-[PS]-E-[KE]-X-I.|5.				cell differentiation|cell redox homeostasis|glycerol ether metabolic process|multicellular organismal development|spermatogenesis	cytoplasm	electron carrier activity|nutrient reservoir activity|protein disulfide oxidoreductase activity|thioredoxin-disulfide reductase activity			ovary(1)|pancreas(1)	2						GGGTGACATCCCCAAGGCCCC	0.567000													46	82					0	0	0.010771	0	0
LAMA3	3909	broad.mit.edu	37	18	21489122	21489122	+	Missense_Mutation	SNP	A	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr18:21489122A>G	uc002kuq.2	+	55	7107	c.7021A>G	c.(7021-7023)AAG>GAG	p.K2341E	LAMA3_uc002kur.2_Missense_Mutation_p.K2285E|LAMA3_uc002kus.3_Missense_Mutation_p.K732E|LAMA3_uc002kut.3_Missense_Mutation_p.K676E	NM_198129	NP_937762	Q16787	LAMA3_HUMAN	laminin alpha 3 subunit isoform 1	2341	Domain II and I.|Potential.				cell adhesion|epidermis development|hemidesmosome assembly|regulation of cell adhesion|regulation of cell migration|regulation of embryonic development	laminin-1 complex	receptor binding|structural molecule activity			ovary(8)|skin(2)|central_nervous_system(1)	11	all_cancers(21;7.81e-05)|all_epithelial(16;4.45e-07)|Lung NSC(20;0.00156)|all_lung(20;0.00508)|Colorectal(14;0.0202)|Ovarian(20;0.17)				Alteplase(DB00009)|Anistreplase(DB00029)|Reteplase(DB00015)|Tenecteplase(DB00031)	AACAGTGAATAAGTTAACCAA	0.373000													22	36					0	0	0.012319	0	0
OR2Z1	284383	broad.mit.edu	37	19	8842008	8842008	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:8842008C>T	uc010xkg.1	+	1	618	c.618C>T	c.(616-618)ATC>ATT	p.I206I		NM_001004699	NP_001004699	Q8NG97	OR2Z1_HUMAN	olfactory receptor, family 2, subfamily Z,	206	Helical; Name=5; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			central_nervous_system(1)|skin(1)	2						GGGTGCTGATCCTAATGCTCC	0.572000													38	52					0	0	0.021022	0	0
MUC16	94025	broad.mit.edu	37	19	8993398	8993398	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:8993398C>T	uc002mkp.2	-	66	41895	c.41691G>A	c.(41689-41691)CTG>CTA	p.L13897L	MUC16_uc010dwi.2_RNA|MUC16_uc010dwj.2_Silent_p.L714L|MUC16_uc010xki.1_RNA	NM_024690	NP_078966	Q8WXI7	MUC16_HUMAN	mucin 16	13900	Extracellular (Potential).|SEA 12.			Missing (in Ref. 3; AAK74120).	cell adhesion	extracellular space|extrinsic to membrane|integral to membrane|plasma membrane	protein binding			lung(30)|ovary(15)|breast(8)|large_intestine(1)|skin(1)|prostate(1)|pancreas(1)	57						TGTCCCTGTCCAGTGTGTAGG	0.567000													33	70					0	0	0.023175	0	0
ECSIT	51295	broad.mit.edu	37	19	11623974	11623974	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:11623974G>A	uc002msb.2	-	4	769	c.635C>T	c.(634-636)CCC>CTC	p.P212L	ECSIT_uc002msa.1_RNA|ECSIT_uc010dyc.1_Missense_Mutation_p.P212L|ECSIT_uc010dyd.2_Missense_Mutation_p.P212L|ECSIT_uc010xma.1_Intron	NM_016581	NP_057665	Q9BQ95	ECSIT_HUMAN	evolutionarily conserved signaling intermediate	212					innate immune response|regulation of oxidoreductase activity	mitochondrion	oxidoreductase activity, acting on NADH or NADPH|protein binding			ovary(1)	1						CACTGGGAAGGGGTTGACGTT	0.587000													25	42					0	0	0.016522	0	0
CASP14	23581	broad.mit.edu	37	19	15164549	15164549	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:15164549C>T	uc010dzv.1	+	4	491	c.183C>T	c.(181-183)TTC>TTT	p.F61F	CASP14_uc002naf.2_Silent_p.F61F	NM_012114	NP_036246	P31944	CASPE_HUMAN	caspase 14 precursor	61					apoptosis|cell differentiation|epidermis development|proteolysis	cytoplasm|nucleus	cysteine-type endopeptidase activity			skin(2)|ovary(1)|lung(1)	4						TCCAGCAATTCCAGGAAGAGC	0.562000													27	38					0	0	0.024334	0	0
NOTCH3	4854	broad.mit.edu	37	19	15276755	15276755	+	Missense_Mutation	SNP	C	T	T	rs138265894	by1000genomes	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:15276755C>T	uc002nan.2	-	30	5586	c.5510G>A	c.(5509-5511)CGT>CAT	p.R1837H		NM_000435	NP_000426	Q9UM47	NOTC3_HUMAN	Notch homolog 3 precursor	1837	Cytoplasmic (Potential).				Notch receptor processing|Notch signaling pathway|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytosol|endoplasmic reticulum lumen|extracellular region|Golgi lumen|integral to membrane|nucleoplasm|plasma membrane	calcium ion binding|protein binding|receptor activity			lung(8)|ovary(5)|skin(4)|prostate(2)|central_nervous_system(1)|breast(1)	21			OV - Ovarian serous cystadenocarcinoma(3;2.6e-20)|Epithelial(3;1.34e-16)|all cancers(3;5.13e-15)			CTCGCCAGTACGGTCAGTCCG	0.607000													11	28					0	0	0.010729	0	0
CIB3	117286	broad.mit.edu	37	19	16275623	16275623	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:16275623C>T	uc002nds.2	-	5	448	c.448G>A	c.(448-450)GAG>AAG	p.E150K	CIB3_uc010eae.2_Missense_Mutation_p.E89K|CIB3_uc010eaf.2_RNA|CIB3_uc010eag.2_Missense_Mutation_p.E101K	NM_054113	NP_473454	Q96Q77	CIB3_HUMAN	DNA-dependent protein kinase catalytic	150	EF-hand 3.						calcium ion binding			ovary(1)	1						AGCACCTTCTCACATACCAGG	0.572000													32	36					0	0	0.009535	0	0
B3GNT3	10331	broad.mit.edu	37	19	17922801	17922801	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:17922801C>T	uc002nhk.1	+	3	1074	c.989C>T	c.(988-990)TCC>TTC	p.S330F	B3GNT3_uc002nhl.1_Missense_Mutation_p.S330F|B3GNT3_uc010ebd.1_Missense_Mutation_p.S330F|B3GNT3_uc010ebe.1_Missense_Mutation_p.S330F	NM_014256	NP_055071	Q9Y2A9	B3GN3_HUMAN	UDP-GlcNAc:betaGal	330	Lumenal (Potential).				protein glycosylation	Golgi membrane|integral to plasma membrane	galactosyltransferase activity			upper_aerodigestive_tract(1)	1						CAACGCCTGTCCTCCTTTGAC	0.607000													57	113					0	0	0.014410	0	0
UPF1	5976	broad.mit.edu	37	19	18968188	18968188	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:18968188C>T	uc002nkg.2	+	15	2336	c.2061C>T	c.(2059-2061)GCC>GCT	p.A687A	UPF1_uc002nkf.2_Silent_p.A676A|UPF1_uc002nkh.2_5'Flank	NM_002911	NP_002902	Q92900	RENT1_HUMAN	regulator of nonsense transcripts 1	687					cell cycle|DNA repair|DNA replication|histone mRNA catabolic process|mRNA export from nucleus|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay|regulation of translational termination	chromatin|cytoplasmic mRNA processing body|exon-exon junction complex	ATP binding|ATP-dependent RNA helicase activity|chromatin binding|DNA binding|protein binding|protein binding|RNA binding|zinc ion binding			ovary(1)|central_nervous_system(1)	2						AGAAGGCGGCCAAGGCCGGGC	0.647000													28	44					0	0	0.010818	0	0
Unknown	0	broad.mit.edu	37	19	23159477	23159477	+	RNA	SNP	A	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:23159477A>T	uc002nqy.1	-	3		c.673T>A			uc002nqz.1_Missense_Mutation_p.I157N					Homo sapiens zinc finger protein 117, mRNA (cDNA clone IMAGE:40112371).																		TCCAGTATGAATTCTCTTATA	0.363000													14	13					0	0	0.020292	0	0
RPSAP58	388524	broad.mit.edu	37	19	24010294	24010294	+	Missense_Mutation	SNP	C	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:24010294C>G	uc002nrn.2	+	4	754	c.331C>G	c.(331-333)CAG>GAG	p.Q111E		NM_002295	NP_002286			ribosomal protein SA												0						CTTCACTAACCAGATCCAGGC	0.567000													3	47					0	0	0.004672	0	0
LRP3	4037	broad.mit.edu	37	19	33695571	33695571	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:33695571C>T	uc010edh.2	+	4	381	c.288C>T	c.(286-288)TCC>TCT	p.S96S	LRP3_uc010xrp.1_5'UTR|LRP3_uc002nuk.3_5'UTR	NM_002333	NP_002324	O75074	LRP3_HUMAN	low density lipoprotein receptor-related protein	96	Extracellular (Potential).|CUB 1.				receptor-mediated endocytosis	coated pit|integral to membrane	receptor activity			pancreas(2)|ovary(1)	3	Esophageal squamous(110;0.137)					TGGAGGAGTCCCACCAGTGCT	0.672000													48	68					0	0	0.014410	0	0
ZFP30	22835	broad.mit.edu	37	19	38126524	38126524	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:38126524G>A	uc002ogv.1	-	6	1434	c.918C>T	c.(916-918)GCC>GCT	p.A306A	ZFP30_uc002ogw.1_Silent_p.A306A|ZFP30_uc002ogx.1_Silent_p.A306A|ZFP30_uc010xtt.1_Silent_p.A305A	NM_014898	NP_055713	Q9Y2G7	ZFP30_HUMAN	zinc finger protein 30 homolog	306	C2H2-type 6.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0			COAD - Colon adenocarcinoma(19;0.114)|Colorectal(19;0.177)			TACACAGAAAGGCCTGACCAC	0.463000													51	61					0	0	0.014410	0	0
PLEKHG2	64857	broad.mit.edu	37	19	39914442	39914442	+	Missense_Mutation	SNP	C	T	T	rs34762911	byFrequency	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:39914442C>T	uc010xuz.1	+	19	2994	c.2669C>T	c.(2668-2670)TCT>TTT	p.S890F	PLEKHG2_uc010xuy.1_Missense_Mutation_p.S831F|PLEKHG2_uc002olj.2_Intron|PLEKHG2_uc010xva.1_Missense_Mutation_p.S668F	NM_022835	NP_073746	Q9H7P9	PKHG2_HUMAN	common-site lymphoma/leukemia guanine nucleotide	890					apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol	Rho guanyl-nucleotide exchange factor activity			skin(2)|pancreas(1)|breast(1)	4	all_cancers(60;3.08e-07)|all_lung(34;2.66e-08)|Lung NSC(34;3e-08)|all_epithelial(25;6.57e-07)|Ovarian(47;0.0569)		Epithelial(26;2.92e-26)|all cancers(26;2.01e-23)|Lung(45;0.000499)|LUSC - Lung squamous cell carcinoma(53;0.000657)			GCCCAGGAGTCTGTCCCCCTG	0.577000													34	41					0	0	0.012213	0	0
DMRTC2	63946	broad.mit.edu	37	19	42351543	42351543	+	Missense_Mutation	SNP	C	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:42351543C>A	uc002ors.2	+	2	130	c.47C>A	c.(46-48)TCT>TAT	p.S16Y	DMRTC2_uc002orr.1_Translation_Start_Site|DMRTC2_uc010xwe.1_Missense_Mutation_p.S16Y	NM_001040283	NP_001035373	Q8IXT2	DMRTD_HUMAN	DMRT-like family C2	16					cell differentiation|sex differentiation	nucleus	DNA binding|metal ion binding|sequence-specific DNA binding transcription factor activity				0						CCCTTAGACTCTGCCCCCTGG	0.627000													44	58					1.61004e-24	2.17519e-24	0.014410	1	0
MEGF8	1954	broad.mit.edu	37	19	42880268	42880268	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:42880268G>A	uc002otl.3	+	41	8313	c.7678G>A	c.(7678-7680)GCC>ACC	p.A2560T	MEGF8_uc002otm.3_Missense_Mutation_p.A2168T|MEGF8_uc002otn.3_Missense_Mutation_p.A221T	NM_001410	NP_001401	Q7Z7M0	MEGF8_HUMAN	multiple EGF-like-domains 8	2627	Extracellular (Potential).					integral to membrane	calcium ion binding|structural molecule activity			ovary(1)	1		Prostate(69;0.00682)				TGGGCCCGGCGCCAACGGCTC	0.552000													11	21					0	0	0.008291	0	0
IRGQ	126298	broad.mit.edu	37	19	44096256	44096256	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:44096256G>A	uc002oww.2	-	2	1912	c.1794C>T	c.(1792-1794)CAC>CAT	p.H598H	IRGQ_uc010eiv.2_Silent_p.H598H	NM_001007561	NP_001007562	Q8WZA9	IRGQ_HUMAN	immunity-related GTPase family, Q	598	Ala-rich.						protein binding			ovary(1)|pancreas(1)	2		Prostate(69;0.0199)				GCAGGACGCCGTGAGCCGCTC	0.706000													7	59					0	0	0.003080	0	0
ZNF227	7770	broad.mit.edu	37	19	44739804	44739804	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:44739804C>T	uc002oyu.2	+	6	1426	c.1221C>T	c.(1219-1221)CCC>CCT	p.P407P	ZNF227_uc010xwu.1_Silent_p.P356P|ZNF227_uc002oyv.2_Silent_p.P407P|ZNF227_uc010xwv.1_Silent_p.P356P|ZNF227_uc010xww.1_Silent_p.P328P|ZNF227_uc002oyw.2_Silent_p.P379P|ZNF227_uc010ejh.2_Silent_p.P400P|ZNF235_uc002oyx.1_Intron	NM_182490	NP_872296	Q86WZ6	ZN227_HUMAN	zinc finger protein 227	407					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			ovary(1)	1		Prostate(69;0.0435)				GTGAGAAGCCCTATAAATGTG	0.478000													28	29					0	0	0.027356	0	0
GPR4	2828	broad.mit.edu	37	19	46094942	46094942	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:46094942G>A	uc002pcm.2	-	2	1128	c.183C>T	c.(181-183)ATC>ATT	p.I61I	OPA3_uc010xxk.1_Intron	NM_005282	NP_005273	P46093	GPR4_HUMAN	G protein-coupled receptor 4	61	Helical; Name=2; (Potential).					integral to plasma membrane	G-protein coupled receptor activity			ovary(2)	2				OV - Ovarian serous cystadenocarcinoma(262;0.0071)|GBM - Glioblastoma multiforme(486;0.128)|Epithelial(262;0.223)		GCAGGTCGGCGATGCTGAGGT	0.647000													30	47					0	0	0.009535	0	0
LIM2	3982	broad.mit.edu	37	19	51883515	51883515	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:51883515C>T	uc002pwm.2	-	5	506	c.462G>A	c.(460-462)GGG>GGA	p.G154G	LIM2_uc002pwl.2_Silent_p.G196G	NM_001161748	NP_001155220	P55344	LMIP_HUMAN	lens intrinsic membrane protein 2, 19kDa isoform	154	Helical; (Potential).				cell-cell junction assembly	cell junction|integral to membrane	structural constituent of eye lens				0		all_neural(266;0.0529)		GBM - Glioblastoma multiforme(134;0.000214)|OV - Ovarian serous cystadenocarcinoma(262;0.00985)		TGTAGAAAATCCCTGCATGAG	0.537000													10	13					0	0	0.008291	0	0
FPR1	2357	broad.mit.edu	37	19	52250217	52250217	+	Missense_Mutation	SNP	T	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:52250217T>G	uc002pxq.2	-	2	126	c.31A>C	c.(31-33)ATC>CTC	p.I11L		NM_002029	NP_002020	P21462	FPR1_HUMAN	formyl peptide receptor 1	11	Extracellular (Potential).				activation of MAPK activity|cellular component movement|chemotaxis|G-protein signaling, coupled to cAMP nucleotide second messenger|nitric oxide mediated signal transduction	endosome|integral to membrane|plasma membrane	N-formyl peptide receptor activity			ovary(1)|lung(1)|skin(1)	3		all_neural(266;0.0189)|Medulloblastoma(540;0.146)		GBM - Glioblastoma multiforme(134;0.00106)|OV - Ovarian serous cystadenocarcinoma(262;0.018)	Nedocromil(DB00716)	CCTCCAGAGATGTTCGTGGGG	0.502000													13	10					0	0	0.013537	0	0
ZNF880	400713	broad.mit.edu	37	19	52887585	52887585	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:52887585G>A	uc002pzc.2	+	4	801	c.752G>A	c.(751-753)CGA>CAA	p.R251Q		NM_001145434	NP_001138906	Q6PDB4	ZN880_HUMAN	zinc finger protein LOC400713	251	C2H2-type 3.				regulation of transcription, DNA-dependent	intracellular	nucleic acid binding|zinc ion binding				0						CTCTTCAATCGAATTTCACTC	0.403000													14	11					0	0	0.024245	0	0
ZNF28	7576	broad.mit.edu	37	19	53303978	53303978	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:53303978G>A	uc002qad.2	-	4	1240	c.1120C>T	c.(1120-1122)CGT>TGT	p.R374C	ZNF28_uc002qac.2_Missense_Mutation_p.R321C|ZNF28_uc010eqe.2_Missense_Mutation_p.R320C	NM_006969	NP_008900	P17035	ZNF28_HUMAN	zinc finger protein 28	374	C2H2-type 6.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			skin(1)	1				GBM - Glioblastoma multiforme(134;0.0386)|Lung(386;0.145)		TGAAGCCTACGATGGCGTGCA	0.383000													38	40					0	0	0.017118	0	0
ZNF415	55786	broad.mit.edu	37	19	53611856	53611856	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:53611856G>A	uc002qax.2	-	7	1935	c.1586C>T	c.(1585-1587)TCA>TTA	p.S529L	ZNF415_uc002qat.2_Missense_Mutation_p.S493L|ZNF415_uc002qaw.2_Missense_Mutation_p.S481L|ZNF415_uc010yds.1_Missense_Mutation_p.S481L|ZNF415_uc010ydt.1_Missense_Mutation_p.S481L|ZNF415_uc002qau.2_Missense_Mutation_p.S468L|ZNF415_uc002qav.2_Missense_Mutation_p.S493L|ZNF415_uc002qba.2_Missense_Mutation_p.S251L|ZNF415_uc002qay.2_Missense_Mutation_p.S468L|ZNF415_uc002qaz.2_Missense_Mutation_p.S529L	NR_028343		Q09FC8	ZN415_HUMAN	RecName: Full=Zinc finger protein 415;	529	C2H2-type 10.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|microtubule cytoskeleton|nucleolus	DNA binding|zinc ion binding			ovary(1)	1				GBM - Glioblastoma multiforme(134;0.0191)		AGTTAGGCTTGAATGCACACT	0.433000													53	69					0	0	0.014410	0	0
C2orf89	129293	broad.mit.edu	37	2	85051283	85051283	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:85051283G>A	uc010ysl.1	-	6	1217	c.1128C>T	c.(1126-1128)ATC>ATT	p.I376I	C2orf89_uc002sou.3_Silent_p.I327I	NM_001080824	NP_001074293	Q86V40	CB089_HUMAN	hypothetical protein LOC129293 precursor	376	Extracellular (Potential).					integral to membrane				ovary(1)	1						TTGGAGCAAAGATGGTGGACA	0.582000													19	4					0	0	0.008871	0	0
Unknown	0	broad.mit.edu	37	2	89327187	89327187	+	RNA	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:89327187C>T	uc010ytr.1	-	67		c.6159G>A			uc002stl.2_Intron					Parts of antibodies, mostly variable regions.																		TCCATGGTTCCCTCTGGGTCC	0.557000													26	12					0	0	0.021523	0	0
LRP1B	53353	broad.mit.edu	37	2	140995774	140995774	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:140995774C>T	uc002tvj.1	-	89	14479	c.13507G>A	c.(13507-13509)GAT>AAT	p.D4503N		NM_018557	NP_061027	Q9NZR2	LRP1B_HUMAN	low density lipoprotein-related protein 1B	4503	Cytoplasmic (Potential).				protein transport|receptor-mediated endocytosis	integral to membrane	calcium ion binding			lung(17)|skin(12)|ovary(12)|pancreas(3)|upper_aerodigestive_tract(2)|central_nervous_system(2)|liver(1)|kidney(1)	50		all_cancers(3;1.1e-60)|all_epithelial(3;1.94e-59)|all_lung(3;1.09e-24)|Lung NSC(3;5.65e-24)|Esophageal squamous(3;5.41e-13)|Renal(3;0.000147)|Breast(3;0.000527)|Hepatocellular(3;0.011)|all_neural(3;0.014)|Colorectal(150;0.101)		UCEC - Uterine corpus endometrioid carcinoma (2;0.00139)|Epithelial(1;1.25e-24)|all cancers(1;8.86e-24)|OV - Ovarian serous cystadenocarcinoma(1;2.45e-12)|LUSC - Lung squamous cell carcinoma(1;2.97e-10)|Lung(1;6.05e-09)|BRCA - Breast invasive adenocarcinoma(221;0.0103)		TCGTTGTGATCATGATCTACC	0.353000										TSP Lung(27;0.18)			26	11					0	0	0.007291	0	0
EVX2	344191	broad.mit.edu	37	2	176947070	176947070	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:176947070C>T	uc010zeu.1	-	2	721	c.535G>A	c.(535-537)GGT>AGT	p.G179S		NM_001080458	NP_001073927	Q03828	EVX2_HUMAN	even-skipped homeobox 2	179						nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity			ovary(2)	2			OV - Ovarian serous cystadenocarcinoma(117;0.0207)|Epithelial(96;0.18)	READ - Rectum adenocarcinoma(9;0.0678)|Colorectal(32;0.115)		CCGGAGCCACCCAGCGCCGCG	0.711000													4	3					0	0	0.014758	0	0
TTN	7273	broad.mit.edu	37	2	179431635	179431635	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:179431635G>A	uc010zfg.1	-	275	71744	c.71520C>T	c.(71518-71520)AAC>AAT	p.N23840N	uc002umo.2_Intron|uc002ump.1_Intron|TTN_uc010zfh.1_Silent_p.N17535N|TTN_uc010zfi.1_Silent_p.N17468N|TTN_uc010zfj.1_Silent_p.N17343N	NM_133378	NP_596869	Q8WZ42	TITIN_HUMAN	titin isoform N2-A	24767							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			ovary(58)|stomach(19)|large_intestine(17)|lung(16)|skin(16)|breast(10)|pancreas(7)|kidney(4)|central_nervous_system(3)|urinary_tract(2)|upper_aerodigestive_tract(1)	153			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			TATCTGGACGGTTCCAACAGA	0.413000													45	17					0	0	0.011902	0	0
SGOL2	151246	broad.mit.edu	37	2	201438005	201438005	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:201438005C>T	uc002uvw.2	+	7	3049	c.2936C>T	c.(2935-2937)TCC>TTC	p.S979F	SGOL2_uc010zhd.1_Missense_Mutation_p.S979F|SGOL2_uc010zhe.1_Missense_Mutation_p.S979F	NM_152524	NP_689737	Q562F6	SGOL2_HUMAN	shugoshin-like 2 isoform 1	979					cell division|mitotic prometaphase	condensed chromosome kinetochore|cytosol|mitotic cohesin complex	protein binding			ovary(2)|skin(2)	4						ATTTTAGATTCCTACAAAGTA	0.294000													26	8					0	0	0.018920	0	0
SPHKAP	80309	broad.mit.edu	37	2	228886527	228886527	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:228886527C>T	uc002vpq.2	-	6	644	c.597G>A	c.(595-597)CTG>CTA	p.L199L	SPHKAP_uc002vpp.2_Silent_p.L199L|SPHKAP_uc010zlx.1_Silent_p.L199L	NM_001142644	NP_001136116	Q2M3C7	SPKAP_HUMAN	sphingosine kinase type 1-interacting protein	199						cytoplasm	protein binding			skin(5)|ovary(4)|lung(1)	10		Renal(207;0.025)|all_hematologic(139;0.15)|all_lung(227;0.204)|Acute lymphoblastic leukemia(138;0.205)|Esophageal squamous(248;0.23)		Epithelial(121;8.17e-11)|all cancers(144;7.92e-08)|Lung(261;0.0168)|LUSC - Lung squamous cell carcinoma(224;0.0232)		TGTCATCCTCCAGTTTCAAGA	0.463000													21	17					0	0	0.012319	0	0
OR6B3	150681	broad.mit.edu	37	2	240984604	240984604	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr2:240984604C>T	uc010zoe.1	-	1	886	c.886G>A	c.(886-888)GAA>AAA	p.E296K	PRR21_uc010zod.1_5'Flank	NM_173351	NP_775486	Q8NGW1	OR6B3_HUMAN	olfactory receptor, family 6, subfamily B,	296	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0		all_epithelial(40;1.64e-11)|Breast(86;0.000327)|Renal(207;0.00571)|Ovarian(221;0.104)|all_hematologic(139;0.182)|all_lung(227;0.229)|Melanoma(123;0.238)		Epithelial(121;1.05e-29)|all cancers(36;3.52e-28)|OV - Ovarian serous cystadenocarcinoma(60;4.63e-14)|Kidney(56;2.99e-09)|KIRC - Kidney renal clear cell carcinoma(57;3.23e-08)|BRCA - Breast invasive adenocarcinoma(100;1.56e-05)|Lung(119;0.00344)|LUSC - Lung squamous cell carcinoma(224;0.0148)|Colorectal(34;0.019)|COAD - Colon adenocarcinoma(134;0.141)		TTCTTAAATTCCTTATTCCTC	0.478000													92	25					0	0	0.014410	0	0
BRD1	23774	broad.mit.edu	37	22	50167966	50167966	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr22:50167966G>A	uc003biv.2	-	12	3579	c.3092C>T	c.(3091-3093)GCC>GTC	p.A1031V	BRD1_uc011arf.1_Missense_Mutation_p.A757V|BRD1_uc011arg.1_Missense_Mutation_p.A1080V|BRD1_uc011arh.1_Missense_Mutation_p.A1031V|BRD1_uc003biu.3_Missense_Mutation_p.A1162V	NM_014577	NP_055392	O95696	BRD1_HUMAN	bromodomain containing protein 1	1031					histone H3 acetylation	MOZ/MORF histone acetyltransferase complex	zinc ion binding			pancreas(1)	1		all_cancers(38;6.11e-10)|all_epithelial(38;8.06e-09)|all_lung(38;6.64e-05)|Lung NSC(38;0.0011)|Breast(42;0.00235)|Ovarian(80;0.0139)|Lung SC(80;0.164)		UCEC - Uterine corpus endometrioid carcinoma (28;0.0369)|BRCA - Breast invasive adenocarcinoma(115;0.21)		GATCCGCACGGCCTTCCGGAT	0.572000													64	26					0	0	0.014410	0	0
SBF1	6305	broad.mit.edu	37	22	50903030	50903030	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr22:50903030C>T	uc003blh.2	-	14	1764	c.1569G>A	c.(1567-1569)AAG>AAA	p.K523K	SBF1_uc011arx.1_Silent_p.K187K|SBF1_uc003bli.2_Silent_p.K524K	NM_002972	NP_002963	O95248	MTMR5_HUMAN	SET binding factor 1	523					protein dephosphorylation	integral to membrane|nucleus	protein tyrosine/serine/threonine phosphatase activity				0		all_cancers(38;5.78e-13)|all_epithelial(38;1.71e-11)|all_lung(38;3.89e-05)|Breast(42;0.000523)|Lung NSC(38;0.000992)|Ovarian(80;0.0221)|Hepatocellular(38;0.0691)|Lung SC(80;0.113)		BRCA - Breast invasive adenocarcinoma(115;0.206)|LUAD - Lung adenocarcinoma(64;0.247)		CACCCTGCATCTTGGCTGCAG	0.692000													45	10					0	0	0.013114	0	0
SCN11A	11280	broad.mit.edu	37	3	38921496	38921496	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:38921496C>T	uc011ays.1	-	19	3537	c.3338G>A	c.(3337-3339)GGA>GAA	p.G1113E	SCN11A_uc010hhn.1_Missense_Mutation_p.G191E	NM_014139	NP_054858	Q9UI33	SCNBA_HUMAN	sodium channel, voltage-gated, type XI, alpha	1113	Helical; Name=S2 of repeat III; (By similarity).|III.				response to drug	voltage-gated sodium channel complex	voltage-gated sodium channel activity			skin(6)|ovary(1)|haematopoietic_and_lymphoid_tissue(1)|pancreas(1)	9				Kidney(284;0.00202)|KIRC - Kidney renal clear cell carcinoma(284;0.00226)	Cocaine(DB00907)	CTTTCCAAATCCGAAGGCTAC	0.398000													17	18					0	0	0.004990	0	0
ITIH1	3697	broad.mit.edu	37	3	52825798	52825798	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:52825798G>A	uc003dfs.2	+	22	2631	c.2607G>A	c.(2605-2607)AGG>AGA	p.R869R	ITIH1_uc010hmn.1_RNA|ITIH1_uc003dft.2_Missense_Mutation_p.G461R|ITIH1_uc010hmo.1_Silent_p.R423R|ITIH1_uc003dfu.2_Silent_p.R235R|ITIH3_uc003dfv.2_5'Flank|ITIH3_uc011bek.1_5'Flank	NM_002215	NP_002206	P19827	ITIH1_HUMAN	inter-alpha (globulin) inhibitor H1	869	Hyaluronan-binding.				hyaluronan metabolic process|leukocyte activation	extracellular region	calcium ion binding|serine-type endopeptidase inhibitor activity			ovary(3)	3				BRCA - Breast invasive adenocarcinoma(193;7.04e-05)|Kidney(197;0.000659)|KIRC - Kidney renal clear cell carcinoma(197;0.000795)|OV - Ovarian serous cystadenocarcinoma(275;0.0498)		CTCTGCACAGGGGTTTGCAAA	0.587000													9	21					0	0	0.004482	0	0
KALRN	8997	broad.mit.edu	37	3	124416470	124416470	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:124416470C>T	uc003ehg.2	+	55	7857	c.7730C>T	c.(7729-7731)GCC>GTC	p.A2577V	KALRN_uc003ehk.2_Missense_Mutation_p.A880V	NM_001024660	NP_001019831	O60229	KALRN_HUMAN	kalirin, RhoGEF kinase isoform 1	2576	Fibronectin type-III.				apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|nervous system development|regulation of Rho protein signal transduction|small GTPase mediated signal transduction|vesicle-mediated transport	actin cytoskeleton|cytosol	ATP binding|GTPase activator activity|metal ion binding|protein binding|protein serine/threonine kinase activity|Rho guanyl-nucleotide exchange factor activity			large_intestine(2)|ovary(2)|central_nervous_system(1)|skin(1)	6						CGCCCCATTGCCCAGGAGAGA	0.522000													8	11					0	0	0.004482	0	0
KALRN	8997	broad.mit.edu	37	3	124438176	124438176	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:124438176C>T	uc003ehg.2	+	60	8947	c.8820C>T	c.(8818-8820)CCC>CCT	p.P2940P	KALRN_uc003ehk.2_Silent_p.P1243P	NM_001024660	NP_001019831	O60229	KALRN_HUMAN	kalirin, RhoGEF kinase isoform 1	2939					apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|nervous system development|regulation of Rho protein signal transduction|small GTPase mediated signal transduction|vesicle-mediated transport	actin cytoskeleton|cytosol	ATP binding|GTPase activator activity|metal ion binding|protein binding|protein serine/threonine kinase activity|Rho guanyl-nucleotide exchange factor activity			large_intestine(2)|ovary(2)|central_nervous_system(1)|skin(1)	6						GGCTGCAGCCCCATAATGGCA	0.532000													21	48					0	0	0.010504	0	0
IGSF10	285313	broad.mit.edu	37	3	151165385	151165385	+	Missense_Mutation	SNP	T	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:151165385T>G	uc011bod.1	-	4	2384	c.2384A>C	c.(2383-2385)GAT>GCT	p.D795A		NM_178822	NP_849144	Q6WRI0	IGS10_HUMAN	immunoglobulin superfamily, member 10 precursor	795					cell differentiation|multicellular organismal development|ossification	extracellular region				skin(7)|ovary(5)|central_nervous_system(1)	13			LUSC - Lung squamous cell carcinoma(72;0.0394)|Lung(72;0.0517)			GCCTGAGGAATCGTCTTCTTC	0.488000													30	58					0	0	0.008361	0	0
PLCH1	23007	broad.mit.edu	37	3	155241775	155241775	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:155241775G>A	uc011bok.1	-	10	1622	c.1345C>T	c.(1345-1347)CAC>TAC	p.H449Y	PLCH1_uc011boj.1_Missense_Mutation_p.H449Y|PLCH1_uc011bol.1_Missense_Mutation_p.H431Y	NM_001130960	NP_001124432	Q4KWH8	PLCH1_HUMAN	phospholipase C eta 1 isoform a	449					lipid catabolic process|phosphatidylinositol-mediated signaling	membrane	calcium ion binding|calcium-dependent phospholipase C activity|phosphatidylinositol phospholipase C activity|signal transducer activity			skin(3)|ovary(1)	4			Lung(72;0.11)|LUSC - Lung squamous cell carcinoma(72;0.114)			TCCCCAAGGTGATAAGGCAAC	0.318000													75	94					0	0	0.014410	0	0
FAM131A	131408	broad.mit.edu	37	3	184059668	184059668	+	Missense_Mutation	SNP	T	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:184059668T>G	uc003fog.2	+	1	1411	c.47T>G	c.(46-48)TTT>TGT	p.F16C	FAM131A_uc003fob.1_Intron|FAM131A_uc003foc.2_Intron|FAM131A_uc003foe.2_Intron	NM_144635	NP_653236	Q6UXB0	F131A_HUMAN	hypothetical protein LOC131408 precursor	16						extracellular region				breast(1)	1	all_cancers(143;1.06e-10)|Ovarian(172;0.0339)		Epithelial(37;1.53e-33)|OV - Ovarian serous cystadenocarcinoma(80;2.72e-22)			GCACATCCCTTTGGAACTGTT	0.562000													75	106					0	0	0.014410	0	0
ATP13A5	344905	broad.mit.edu	37	3	192997207	192997207	+	Missense_Mutation	SNP	A	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:192997207A>G	uc011bsq.1	-	28	3263	c.3263T>C	c.(3262-3264)CTC>CCC	p.L1088P		NM_198505	NP_940907	Q4VNC0	AT135_HUMAN	ATPase type 13A5	1088	Helical; (Potential).				ATP biosynthetic process|cation transport	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism|metal ion binding			ovary(5)|skin(4)|large_intestine(2)	11	all_cancers(143;1.08e-08)|Ovarian(172;0.0386)		OV - Ovarian serous cystadenocarcinoma(49;5.56e-18)|LUSC - Lung squamous cell carcinoma(58;6.08e-06)|Lung(62;6.49e-06)	GBM - Glioblastoma multiforme(46;0.000307)		GAAAATTGTGAGGCCCAAGGC	0.363000													3	89					0	0	0.009096	0	0
ATP13A5	344905	broad.mit.edu	37	3	193002723	193002723	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:193002723C>T	uc011bsq.1	-	27	3206	c.3206G>A	c.(3205-3207)CGA>CAA	p.R1069Q		NM_198505	NP_940907	Q4VNC0	AT135_HUMAN	ATPase type 13A5	1069					ATP biosynthetic process|cation transport	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism|metal ion binding			ovary(5)|skin(4)|large_intestine(2)	11	all_cancers(143;1.08e-08)|Ovarian(172;0.0386)		OV - Ovarian serous cystadenocarcinoma(49;5.56e-18)|LUSC - Lung squamous cell carcinoma(58;6.08e-06)|Lung(62;6.49e-06)	GBM - Glioblastoma multiforme(46;0.000307)		GATGGGTTTTCGAAATGGCTT	0.378000													15	18					0	0	0.020292	0	0
WDR53	348793	broad.mit.edu	37	3	196281400	196281400	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr3:196281400G>A	uc003fwt.2	-	4	1230	c.759C>T	c.(757-759)TCC>TCT	p.S253S		NM_182627	NP_872433	Q7Z5U6	WDR53_HUMAN	WD repeat domain 53	253	WD 5.									breast(1)|skin(1)	2	all_cancers(143;8.88e-09)|Ovarian(172;0.0634)|Breast(254;0.135)		Epithelial(36;1.6e-23)|all cancers(36;1.54e-21)|OV - Ovarian serous cystadenocarcinoma(49;1.29e-18)|LUSC - Lung squamous cell carcinoma(58;1.51e-06)|Lung(62;1.95e-06)	GBM - Glioblastoma multiforme(46;0.00326)		GCAGCAAATAGGATTCTGGGA	0.473000													38	61					0	0	0.025465	0	0
PIGG	54872	broad.mit.edu	37	4	502700	502700	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:502700C>T	uc003gak.3	+	5	978	c.842C>T	c.(841-843)TCC>TTC	p.S281F	PIGG_uc003gaj.3_Missense_Mutation_p.S281F|PIGG_uc011bux.1_RNA|PIGG_uc010ibf.2_Missense_Mutation_p.S148F|PIGG_uc003gal.3_Missense_Mutation_p.S192F|PIGG_uc003gai.2_RNA|PIGG_uc011buw.1_Missense_Mutation_p.S159F|PIGG_uc003gam.2_Missense_Mutation_p.S192F|PIGG_uc003gan.2_Missense_Mutation_p.S192F	NM_001127178	NP_001120650	Q5H8A4	PIGG_HUMAN	phosphatidylinositol glycan anchor biosynthesis,	281	Lumenal (Potential).				C-terminal protein lipidation|preassembly of GPI anchor in ER membrane	endoplasmic reticulum membrane|integral to membrane	CP2 mannose-ethanolamine phosphotransferase activity			central_nervous_system(2)|ovary(1)|skin(1)	4						GGGGCCTCCTCCACCGAGGAG	0.443000													34	42					0	0	0.012213	0	0
CRMP1	1400	broad.mit.edu	37	4	5843034	5843034	+	Splice_Site	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:5843034C>T	uc003gip.2	-	9	912	c.811_splice	c.e9+1	p.G271_splice	CRMP1_uc003gin.1_Splice_Site_p.G183_splice|CRMP1_uc003giq.2_Splice_Site_p.G271_splice|CRMP1_uc003gir.2_Splice_Site_p.G266_splice|CRMP1_uc003gis.2_Splice_Site_p.G385_splice	NM_001313	NP_001304	Q14194	DPYL1_HUMAN	collapsin response mediator protein 1 isoform 2						axon guidance|pyrimidine base catabolic process	cytosol|microtubule organizing center|spindle	dihydropyrimidinase activity|protein binding			ovary(2)	2				Colorectal(103;0.0721)		CGGCTGCATACCTTTCTTCCT	0.627000													90	123					0	0	0.014410	0	0
SH3TC1	54436	broad.mit.edu	37	4	8217959	8217959	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:8217959C>T	uc003gkv.3	+	6	704	c.603C>T	c.(601-603)ACC>ACT	p.T201T	SH3TC1_uc003gkw.3_Silent_p.T125T|SH3TC1_uc003gkx.3_RNA	NM_018986	NP_061859	Q8TE82	S3TC1_HUMAN	SH3 domain and tetratricopeptide repeats 1	201							binding			large_intestine(2)|pancreas(1)	3						TAAGGCTGACCCACGAGAGCC	0.612000													18	20					0	0	0.004990	0	0
SLIT2	9353	broad.mit.edu	37	4	20599960	20599960	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:20599960C>T	uc003gpr.1	+	33	3838	c.3634C>T	c.(3634-3636)CGG>TGG	p.R1212W	SLIT2_uc003gps.1_Missense_Mutation_p.R1204W	NM_004787	NP_004778	O94813	SLIT2_HUMAN	slit homolog 2 precursor	1212	Laminin G-like.				apoptosis involved in luteolysis|axon extension involved in axon guidance|branching morphogenesis of a tube|cell migration involved in sprouting angiogenesis|cellular response to heparin|cellular response to hormone stimulus|chemorepulsion involved in postnatal olfactory bulb interneuron migration|corticospinal neuron axon guidance through spinal cord|induction of negative chemotaxis|motor axon guidance|negative regulation of actin filament polymerization|negative regulation of cell growth|negative regulation of cellular response to growth factor stimulus|negative regulation of chemokine-mediated signaling pathway|negative regulation of endothelial cell migration|negative regulation of lamellipodium assembly|negative regulation of mononuclear cell migration|negative regulation of neutrophil chemotaxis|negative regulation of protein phosphorylation|negative regulation of retinal ganglion cell axon guidance|negative regulation of small GTPase mediated signal transduction|negative regulation of smooth muscle cell chemotaxis|negative regulation of vascular permeability|positive regulation of apoptosis|positive regulation of axonogenesis|response to cortisol stimulus|retinal ganglion cell axon guidance|Roundabout signaling pathway|ureteric bud development	cell surface|cytoplasm|extracellular space|plasma membrane	calcium ion binding|GTPase inhibitor activity|heparin binding|laminin-1 binding|protein homodimerization activity|proteoglycan binding|Roundabout binding			central_nervous_system(4)|skin(4)|ovary(3)	11						AGAACTCTATCGGGGGCGTGT	0.473000													52	81					0	0	0.014410	0	0
TXK	7294	broad.mit.edu	37	4	48078475	48078475	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:48078475C>T	uc003gxx.3	-	12	1268	c.1182G>A	c.(1180-1182)AGG>AGA	p.R394R	TXK_uc010igj.2_RNA|TXK_uc011bzj.1_Silent_p.R81R	NM_003328	NP_003319	P42681	TXK_HUMAN	TXK tyrosine kinase	394	Protein kinase.					cytoplasm	ATP binding|non-membrane spanning protein tyrosine kinase activity				0						CCAAACAATTCCTTGCCGCCT	0.333000													32	37					0	0	0.019004	0	0
C4orf40	401137	broad.mit.edu	37	4	71024045	71024045	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:71024045G>A	uc003hfa.3	+	4	149	c.76G>A	c.(76-78)GAT>AAT	p.D26N	C4orf40_uc003hfb.3_Missense_Mutation_p.D26N	NM_214711	NP_999876	Q6MZM9	CD040_HUMAN	hypothetical protein LOC401137 precursor	26						extracellular region					0						TCTCCTTTAGGATGACAATGA	0.358000													38	82					0	0	0.021022	0	0
BMP2K	55589	broad.mit.edu	37	4	79768397	79768397	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:79768397C>T	uc003hlk.2	+	6	890	c.724C>T	c.(724-726)CCC>TCC	p.P242S	BMP2K_uc010ijl.1_RNA|BMP2K_uc003hlj.2_Missense_Mutation_p.P242S	NM_198892	NP_942595	Q9NSY1	BMP2K_HUMAN	BMP-2 inducible kinase isoform a	242	Protein kinase.					nucleus	ATP binding|protein serine/threonine kinase activity			lung(1)	1						TGGAGGGAAACCCATCACCAC	0.378000													21	12					0	0	0.018920	0	0
ADH1C	126	broad.mit.edu	37	4	100260777	100260777	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:100260777C>T	uc003huu.2	-	10	1145	c.1060G>A	c.(1060-1062)GAA>AAA	p.E354K		NM_000669	NP_000660	P00326	ADH1G_HUMAN	class I alcohol dehydrogenase, gamma subunit	354					ethanol oxidation|xenobiotic metabolic process	cytosol	alcohol dehydrogenase (NAD) activity|zinc ion binding				0				OV - Ovarian serous cystadenocarcinoma(123;1.08e-07)	Fomepizole(DB01213)|NADH(DB00157)	TTTATTTTTTCAAAAGGTAAA	0.308000									Naso-/Oropharyngeal/Laryngeal_Cancer_Familial_Clustering_of				22	38					0	0	0.012319	0	0
PDE5A	8654	broad.mit.edu	37	4	120427082	120427082	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:120427082C>T	uc003idh.2	-	17	2350	c.2195G>A	c.(2194-2196)CGA>CAA	p.R732Q	uc003ide.3_Intron|PDE5A_uc003idf.2_Missense_Mutation_p.R690Q|PDE5A_uc003idg.2_Missense_Mutation_p.R680Q	NM_001083	NP_001074	O76074	PDE5A_HUMAN	phosphodiesterase 5A isoform 1	732	Catalytic (By similarity).				platelet activation|signal transduction	cytosol	3',5'-cyclic-GMP phosphodiesterase activity|cGMP binding|zinc ion binding				0					Dipyridamole(DB00975)|Pentoxifylline(DB00806)|Sildenafil(DB00203)|Tadalafil(DB00820)|Theophylline(DB00277)|Vardenafil(DB00862)	AAATTCTCCTCGCCTCCTACA	0.318000													11	23					0	0	0.010729	0	0
GLRB	2743	broad.mit.edu	37	4	158057765	158057765	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:158057765G>A	uc003ipj.2	+	5	644	c.442G>A	c.(442-444)GAA>AAA	p.E148K		NM_000824	NP_000815	P48167	GLRB_HUMAN	glycine receptor, beta isoform A precursor	148	Extracellular (Probable).				nervous system development|neuropeptide signaling pathway|startle response	cell junction|chloride channel complex|integral to plasma membrane|postsynaptic membrane	extracellular-glycine-gated chloride channel activity|protein binding|receptor activity			skin(2)	2	all_hematologic(180;0.24)	Renal(120;0.0458)		KIRC - Kidney renal clear cell carcinoma(143;0.0564)|COAD - Colon adenocarcinoma(41;0.0642)|Kidney(143;0.0707)	Glycine(DB00145)	TTTTGCAAATGAAAAAAGTGC	0.393000													48	75					0	0	0.014410	0	0
CLCN3	1182	broad.mit.edu	37	4	170601278	170601278	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:170601278C>T	uc003isi.2	+	3	747	c.238C>T	c.(238-240)CCA>TCA	p.P80S	CLCN3_uc003ish.2_Missense_Mutation_p.P80S|CLCN3_uc011cjz.1_Missense_Mutation_p.P63S|CLCN3_uc011cka.1_Missense_Mutation_p.P80S|CLCN3_uc003isj.1_Missense_Mutation_p.P53S	NM_001829	NP_001820	P51790	CLCN3_HUMAN	chloride channel 3 isoform b	80	Cytoplasmic (By similarity).				endosomal lumen acidification	cell surface|early endosome membrane|Golgi membrane|integral to membrane|late endosome membrane|transport vesicle membrane	antiporter activity|ATP binding|PDZ domain binding|protein heterodimerization activity|protein homodimerization activity|voltage-gated chloride channel activity			breast(2)|ovary(1)	3		Prostate(90;0.00601)|Renal(120;0.0183)		GBM - Glioblastoma multiforme(119;0.0233)|LUSC - Lung squamous cell carcinoma(193;0.131)		TGAACCAATTCCAGGTGTTGG	0.358000													23	22					0	0	0.021523	0	0
PLEKHG4B	153478	broad.mit.edu	37	5	163580	163580	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:163580C>T	uc003jak.2	+	11	2375	c.2325C>T	c.(2323-2325)AGC>AGT	p.S775S		NM_052909	NP_443141	Q96PX9	PKH4B_HUMAN	pleckstrin homology domain containing, family G	775					regulation of Rho protein signal transduction	intracellular	Rho guanyl-nucleotide exchange factor activity			skin(2)	2			all cancers(22;0.0253)|Lung(60;0.113)	Kidney(1;0.119)		ATGCCAGGAGCCCCCCGGTCA	0.652000													17	26					0	0	0.028581	0	0
SEMA5A	9037	broad.mit.edu	37	5	9052067	9052067	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:9052067G>A	uc003jek.2	-	20	3475	c.2763C>T	c.(2761-2763)ATC>ATT	p.I921I		NM_003966	NP_003957	Q13591	SEM5A_HUMAN	semaphorin 5A precursor	921	Extracellular (Potential).|TSP type-1 7.				cell adhesion|cell-cell signaling	integral to membrane|plasma membrane				ovary(1)|central_nervous_system(1)	2						GGAACAGGAGGATGCACTGGC	0.592000													13	31					0	0	0.016723	0	0
DNAH5	1767	broad.mit.edu	37	5	13885323	13885323	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:13885323C>T	uc003jfd.2	-	19	2800	c.2758G>A	c.(2758-2760)GGA>AGA	p.G920R		NM_001369	NP_001360	Q8TE73	DYH5_HUMAN	dynein, axonemal, heavy chain 5	920	Stem (By similarity).				microtubule-based movement	cilium axoneme|cytoplasm|microtubule	ATP binding|ATPase activity|microtubule motor activity			ovary(14)|skin(13)|upper_aerodigestive_tract(1)|central_nervous_system(1)|breast(1)|pancreas(1)	31	Lung NSC(4;0.00476)					TCAAAATTTCCTTCTTCTCTT	0.299000									Kartagener_syndrome				11	30					0	0	0.010729	0	0
MARCH11	441061	broad.mit.edu	37	5	16067654	16067654	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:16067654G>A	uc003jfo.2	-	4	1348	c.1135C>T	c.(1135-1137)CGG>TGG	p.R379W	MARCH11_uc010itw.1_Missense_Mutation_p.R135W	NM_001102562	NP_001096032	A6NNE9	MARHB_HUMAN	membrane-associated ring finger (C3HC4) 11	379						cytoplasmic vesicle membrane|integral to membrane	ligase activity|zinc ion binding				0						GGCCTCATCCGATTGAACAGG	0.478000													74	97					0	0	0.014410	0	0
BASP1	10409	broad.mit.edu	37	5	17275459	17275459	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:17275459C>T	uc003jfx.2	+	2	313	c.134C>T	c.(133-135)GCC>GTC	p.A45V		NM_006317	NP_006308	P80723	BASP1_HUMAN	brain abundant, membrane attached signal protein	45				A -> P (in Ref. 1; AAC67374).	glomerular visceral epithelial cell differentiation|negative regulation of transcription, DNA-dependent	cytoplasm|cytoskeleton|growth cone|nuclear speck|plasma membrane	protein domain specific binding|transcription corepressor activity|transcription regulatory region DNA binding				0						CCCCAGGCGGCCGCAGAGCCC	0.677000													4	6					0	0	0.009096	0	0
LOC100133050	100133050	broad.mit.edu	37	5	99715528	99715528	+	RNA	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:99715528C>T	uc011cuw.1	-	4		c.382G>A				NR_027503				Homo sapiens glucuronidase, beta pseudogene (LOC100133050), non-coding RNA.												0						AGCGGACAGTCGAAGCCCTTC	0.607000													4	5					0	0	0.009096	0	0
PCDHA1	56147	broad.mit.edu	37	5	140166149	140166149	+	Missense_Mutation	SNP	C	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140166149C>A	uc003lhb.2	+	1	274	c.274C>A	c.(274-276)CGC>AGC	p.R92S	PCDHA1_uc003lha.2_Missense_Mutation_p.R92S|PCDHA1_uc003lgz.2_Missense_Mutation_p.R92S	NM_018900	NP_061723	Q9Y5I3	PCDA1_HUMAN	protocadherin alpha 1 isoform 1 precursor	92	Cadherin 1.|Extracellular (Potential).				homophilic cell adhesion|nervous system development	extracellular region|integral to plasma membrane	calcium ion binding|protein binding			skin(1)	1			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TCGGATCGATCGCGAGGAGCT	0.567000													57	63					3.76628e-20	5.06764e-20	0.014410	1	0
PCDHA6	56142	broad.mit.edu	37	5	140209955	140209955	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140209955C>T	uc003lho.2	+	1	2306	c.2279C>T	c.(2278-2280)TCC>TTC	p.S760F	PCDHA1_uc003lha.2_Intron|PCDHA1_uc003lhb.2_Intron|PCDHA2_uc003lhd.2_Intron|PCDHA3_uc003lhf.2_Intron|PCDHA4_uc003lhi.2_Intron|PCDHA4_uc003lhh.1_Intron|PCDHA5_uc003lhk.1_Intron|PCDHA5_uc003lhl.2_Intron|PCDHA6_uc003lhn.2_Intron|PCDHA6_uc011dab.1_Missense_Mutation_p.S760F	NM_018909	NP_061732	Q9UN73	PCDA6_HUMAN	protocadherin alpha 6 isoform 1 precursor	760	Cytoplasmic (Potential).				homophilic cell adhesion|nervous system development	extracellular region|integral to plasma membrane	calcium ion binding|protein binding			haematopoietic_and_lymphoid_tissue(1)|skin(1)	2			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			AGGGTGTGCTCCGGGGAGGGC	0.612000													23	33					0	0	0.016522	0	0
PCDHB2	56133	broad.mit.edu	37	5	140475273	140475273	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140475273C>T	uc003lil.2	+	1	1037	c.899C>T	c.(898-900)TCG>TTG	p.S300L	PCDHB2_uc003lim.1_5'UTR	NM_018936	NP_061759	Q9Y5E7	PCDB2_HUMAN	protocadherin beta 2 precursor	300	Extracellular (Potential).|Cadherin 3.				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to plasma membrane	calcium ion binding			ovary(3)|upper_aerodigestive_tract(2)|pancreas(1)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			AGTGCAAAATCGGGAGAACTG	0.413000													28	55					0	0	0.006320	0	0
PCDHB3	56132	broad.mit.edu	37	5	140481738	140481738	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140481738C>T	uc003lio.2	+	1	1505	c.1505C>T	c.(1504-1506)TCC>TTC	p.S502F	uc003lin.2_RNA	NM_018937	NP_061760	Q9Y5E6	PCDB3_HUMAN	protocadherin beta 3 precursor	502	Extracellular (Potential).|Cadherin 5.				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to plasma membrane	calcium ion binding			ovary(1)|pancreas(1)	2			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			CCCCTCTCTTCCCTGGTCTCC	0.657000													55	71					0	0	0.014410	0	0
PCDHB9	56127	broad.mit.edu	37	5	140567380	140567380	+	Missense_Mutation	SNP	G	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140567380G>T	uc003liw.1	+	1	488	c.488G>T	c.(487-489)GGT>GTT	p.G163V		NM_019119	NP_061992	Q9Y5E1	PCDB9_HUMAN	protocadherin beta 9 precursor	163	Extracellular (Potential).|Cadherin 2.				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to membrane|plasma membrane	calcium ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			CCAGATGAAGGTCATAACAGT	0.398000													73	110					6.30617e-38	8.58988e-38	0.014410	1	0
PCDHB11	56125	broad.mit.edu	37	5	140579467	140579467	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140579467G>A	uc003liy.2	+	1	120	c.120G>A	c.(118-120)CAG>CAA	p.Q40Q	PCDHB11_uc011daj.1_Intron	NM_018931	NP_061754	Q9Y5F2	PCDBB_HUMAN	protocadherin beta 11 precursor	40	Extracellular (Potential).|Cadherin 1.				calcium-dependent cell-cell adhesion|homophilic cell adhesion|synapse assembly|synaptic transmission	integral to plasma membrane	calcium ion binding			skin(3)|ovary(2)|upper_aerodigestive_tract(1)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00339)			AAGAAATGCAGAGCGGGAGTT	0.527000													35	64					0	0	0.015359	0	0
PCDHGA6	56109	broad.mit.edu	37	5	140754042	140754042	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:140754042C>T	uc003ljy.1	+	1	392	c.392C>T	c.(391-393)CCC>CTC	p.P131L	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc011dau.1_Missense_Mutation_p.P131L	NM_018919	NP_061742	Q9Y5G7	PCDG6_HUMAN	protocadherin gamma subfamily A, 6 isoform 1	131	Cadherin 1.|Extracellular (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			breast(1)	1			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GACAATACACCCCGATTCTTA	0.443000													38	49					0	0	0.025465	0	0
SPINK5	11005	broad.mit.edu	37	5	147486618	147486618	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:147486618C>T	uc003lox.2	+	17	1571	c.1498C>T	c.(1498-1500)CGG>TGG	p.R500W	SPINK5_uc010jgs.1_Missense_Mutation_p.R472W|SPINK5_uc010jgr.2_Missense_Mutation_p.R481W|SPINK5_uc003low.2_Missense_Mutation_p.R500W|SPINK5_uc003loy.2_Missense_Mutation_p.R500W	NM_006846	NP_006837	Q9NQ38	ISK5_HUMAN	serine peptidase inhibitor, Kazal type 5 isoform	500	Kazal-like 8.				anagen|epithelial cell differentiation|extracellular matrix organization|hair cell differentiation|negative regulation of angiogenesis|negative regulation of immune response|regulation of T cell differentiation	cell cortex|cytosol|endoplasmic reticulum membrane|extracellular region|lamellar body|perinuclear region of cytoplasm	serine-type endopeptidase inhibitor activity			skin(2)|ovary(1)|breast(1)	4			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			CAGTGAATTTCGGGACCAAGT	0.423000													39	51					0	0	0.008740	0	0
ABLIM3	22885	broad.mit.edu	37	5	148619383	148619383	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:148619383C>T	uc003lpy.2	+	13	1387	c.1136C>T	c.(1135-1137)TCC>TTC	p.S379F	ABLIM3_uc003lpz.1_Missense_Mutation_p.S379F|ABLIM3_uc003lqa.1_Missense_Mutation_p.S325F|ABLIM3_uc003lqb.2_Missense_Mutation_p.S317F|ABLIM3_uc003lqc.1_Missense_Mutation_p.S379F|ABLIM3_uc003lqd.1_Missense_Mutation_p.S317F|ABLIM3_uc003lqf.2_Missense_Mutation_p.S317F|ABLIM3_uc003lqe.1_Missense_Mutation_p.S317F	NM_014945	NP_055760	O94929	ABLM3_HUMAN	actin binding LIM protein family, member 3	379					axon guidance|cytoskeleton organization	cytoplasm	actin binding|zinc ion binding			ovary(2)|skin(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TACATAGACTCCCCCACCTAC	0.627000													36	56					0	0	0.021022	0	0
CPEB4	80315	broad.mit.edu	37	5	173317642	173317643	+	Missense_Mutation	DNP	CG	GT	GT			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr5:173317642_173317643CG>GT	uc003mcs.3	+	1	2312_2313	c.906_907CG>GT	c.(904-909)GGCGGT>GGGTGT	p.G303C	CPEB4_uc010jju.1_Missense_Mutation_p.G303C|CPEB4_uc010jjv.2_Missense_Mutation_p.G303C|CPEB4_uc011dfg.1_Missense_Mutation_p.G303C|CPEB4_uc003mct.3_5'Flank|CPEB4_uc003mcu.3_5'Flank	NM_030627	NP_085130	Q17RY0	CPEB4_HUMAN	cytoplasmic polyadenylation element binding	303	Poly-Gly.						nucleotide binding|RNA binding				0	Renal(175;0.000159)|Lung NSC(126;0.0128)|all_lung(126;0.0202)	Medulloblastoma(196;0.0399)|all_neural(177;0.0966)	Kidney(164;3.85e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000183)			GGAGCCCGGGCGGTGGTGGATA	0.579000													54	109					0	0	0.004672	0	0
HIST1H2AA	221613	broad.mit.edu	37	6	25726674	25726674	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:25726674C>T	uc003nfc.2	-	1	117	c.82G>A	c.(82-84)GTA>ATA	p.V28I	HIST1H2BA_uc003nfd.2_5'Flank	NM_170745	NP_734466	Q96QV6	H2A1A_HUMAN	histone cluster 1, H2aa	28					nucleosome assembly	nucleosome|nucleus	DNA binding				0						ATCCGGCCTACGGGAAACTGC	0.547000													37	42					0	0	0.021022	0	0
TCF19	6941	broad.mit.edu	37	6	31127306	31127306	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:31127306C>T	uc003nss.2	+	2	584	c.60C>T	c.(58-60)ACC>ACT	p.T20T	CCHCR1_uc011dne.1_5'Flank|CCHCR1_uc003nsq.3_5'Flank|CCHCR1_uc003nsp.3_5'Flank|CCHCR1_uc003nsr.3_5'Flank|CCHCR1_uc010jsk.1_5'Flank|TCF19_uc003nst.2_Silent_p.T20T	NM_001077511	NP_001070979	Q9Y242	TCF19_HUMAN	transcription factor 19	20					cell proliferation|regulation of transcription from RNA polymerase II promoter	nucleus	sequence-specific DNA binding transcription factor activity|zinc ion binding				0						ATCTCTACACCTTCCACCCCC	0.682000													9	8					0	0	0.008291	0	0
BAT4	7918	broad.mit.edu	37	6	31631878	31631878	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:31631878C>T	uc003nvn.2	-	2	1023	c.378G>A	c.(376-378)CCG>CCA	p.P126P	BAT4_uc003nvo.3_Silent_p.P126P|BAT4_uc003nvp.3_Silent_p.P126P|BAT4_uc003nvq.2_Silent_p.P126P|CSNK2B_uc010jsz.1_5'Flank|CSNK2B_uc010jta.1_5'Flank|CSNK2B_uc003nvr.1_5'Flank|CSNK2B_uc003nvs.1_5'Flank	NM_033177	NP_149417	O95872	GPAN1_HUMAN	HLA-B associated transcript 4	126	ANK 1.					intracellular	nucleic acid binding				0						CTGCCTCATGCGGTTCCAGCA	0.617000													8	542					0	0	0.004482	0	0
VARS	7407	broad.mit.edu	37	6	31749631	31749631	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:31749631G>A	uc003nxe.2	-	19	2763	c.2340C>T	c.(2338-2340)CTC>CTT	p.L780L	VARS_uc003nxf.1_5'Flank|VARS_uc011doi.1_RNA	NM_006295	NP_006286	P26640	SYVC_HUMAN	valyl-tRNA synthetase	780					translational elongation|valyl-tRNA aminoacylation	cytosol	ATP binding|protein binding|valine-tRNA ligase activity			upper_aerodigestive_tract(1)|ovary(1)|skin(1)	3					L-Valine(DB00161)	TGCCTTGCTGGAGACTGATCT	0.617000													146	200					0	0	0.014410	0	0
TRERF1	55809	broad.mit.edu	37	6	42235936	42235936	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:42235936C>T	uc003osd.2	-	5	1956	c.1393G>A	c.(1393-1395)GGG>AGG	p.G465R	TRERF1_uc011duq.1_Missense_Mutation_p.G465R|TRERF1_uc003osb.2_Missense_Mutation_p.G304R|TRERF1_uc003osc.2_Missense_Mutation_p.G304R|TRERF1_uc003ose.2_Missense_Mutation_p.G465R	NM_033502	NP_277037	Q96PN7	TREF1_HUMAN	transcriptional regulating factor 1	465	Interacts with CREBBP.				cholesterol catabolic process|homeostatic process|multicellular organismal development|positive regulation of transcription, DNA-dependent|regulation of hormone biosynthetic process|steroid biosynthetic process	nucleus	DNA bending activity|ligand-dependent nuclear receptor transcription coactivator activity|RNA polymerase II transcription cofactor activity|sequence-specific DNA binding transcription factor activity|transcription factor binding|zinc ion binding			ovary(3)|pancreas(1)|skin(1)	5	Colorectal(47;0.196)		Colorectal(64;0.00062)|COAD - Colon adenocarcinoma(64;0.00152)			TGCTGAGGCCCCATGTTGTTG	0.602000													28	82					0	0	0.009535	0	0
C6orf142	90523	broad.mit.edu	37	6	54025545	54025545	+	Missense_Mutation	SNP	C	T	T	rs141526731	byFrequency	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:54025545C>T	uc003pcg.3	+	7	955	c.842C>T	c.(841-843)TCT>TTT	p.S281F	C6orf142_uc003pcf.2_Missense_Mutation_p.S805F|C6orf142_uc003pch.3_Intron|C6orf142_uc011dxa.1_Missense_Mutation_p.S816F	NM_138569	NP_612636	Q5VWP3	MLIP_HUMAN	hypothetical protein LOC90523	281						nuclear envelope|PML body	protein binding				0	Lung NSC(77;0.0317)					cAGCATTCTTCTGATTCTCCT	0.269000													12	22					0	0	0.016723	0	0
MDN1	23195	broad.mit.edu	37	6	90368015	90368015	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:90368015G>A	uc003pnn.1	-	90	15212	c.15096C>T	c.(15094-15096)TCC>TCT	p.S5032S		NM_014611	NP_055426	Q9NU22	MDN1_HUMAN	MDN1, midasin homolog	5032					protein complex assembly|regulation of protein complex assembly	nucleus	ATP binding|ATPase activity|unfolded protein binding			ovary(8)|skin(2)	10		all_cancers(76;1.47e-06)|Acute lymphoblastic leukemia(125;2.23e-10)|Prostate(29;5.55e-10)|all_hematologic(105;2.42e-06)|all_epithelial(107;0.00246)		BRCA - Breast invasive adenocarcinoma(108;0.0193)		TCTGCCCACAGGAGGCATGCT	0.567000													54	129					0	0	0.014410	0	0
FUT9	10690	broad.mit.edu	37	6	96651941	96651941	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:96651941G>A	uc003pop.3	+	3	1251	c.910G>A	c.(910-912)GAA>AAA	p.E304K		NM_006581	NP_006572	Q9Y231	FUT9_HUMAN	fucosyltransferase 9 (alpha (1,3)	304	Lumenal (Potential).				L-fucose catabolic process|protein glycosylation	Golgi cisterna membrane|integral to membrane	alpha(1,3)-fucosyltransferase activity			skin(4)|ovary(1)	5		all_cancers(76;4.77e-07)|Acute lymphoblastic leukemia(125;4.01e-09)|all_hematologic(75;1.25e-06)|all_epithelial(107;0.00279)|Colorectal(196;0.0356)		BRCA - Breast invasive adenocarcinoma(108;0.08)		GTATCTGAAGGAAGTCGACAA	0.378000													19	62					0	0	0.006122	0	0
STL	7955	broad.mit.edu	37	6	125233728	125233728	+	RNA	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:125233728C>T	uc003pzq.2	-	7		c.1006G>A				NR_026876				Homo sapiens mRNA; cDNA DKFZp451I132 (from clone DKFZp451I132).												0						tcacgatattcccccaggtct	0.229000			T	ETV6	B-ALL								2	0					0	0	0.004672	0	0
SAMD3	154075	broad.mit.edu	37	6	130530752	130530752	+	Missense_Mutation	SNP	A	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:130530752A>C	uc003qbv.2	-	6	597	c.271T>G	c.(271-273)TAC>GAC	p.Y91D	SAMD3_uc003qbx.2_Missense_Mutation_p.Y91D|SAMD3_uc003qbw.2_Missense_Mutation_p.Y91D|SAMD3_uc010kfg.1_Missense_Mutation_p.Y91D|SAMD3_uc003qby.2_Missense_Mutation_p.Y91D|SAMD3_uc003qbz.1_Missense_Mutation_p.Y50D	NM_001017373	NP_001017373	Q8N6K7	SAMD3_HUMAN	sterile alpha motif domain containing 3 isoform	91										ovary(1)	1				GBM - Glioblastoma multiforme(226;0.00594)|OV - Ovarian serous cystadenocarcinoma(155;0.128)		TCATCCCTGTAACTAAGAAAG	0.468000													23	11					0	0	0.018920	0	0
TAAR5	9038	broad.mit.edu	37	6	132910108	132910109	+	Silent	DNP	GG	AA	AA			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr6:132910108_132910109GG>AA	uc003qdk.2	-	1	769_770	c.717_718CC>TT	c.(715-720)AGCCTG>AGTTTG	p.239_240SL>SL		NM_003967	NP_003958	O14804	TAAR5_HUMAN	trace amine associated receptor 5	239_240	Cytoplasmic (Potential).				synaptic transmission	integral to plasma membrane	G-protein coupled receptor activity			skin(1)	1	Breast(56;0.112)			OV - Ovarian serous cystadenocarcinoma(155;0.00604)|GBM - Glioblastoma multiforme(226;0.015)		GCCCCAGCCAGGCTTTTGCTCA	0.505000													26	12					0	0	0.004672	0	0
HDAC9	9734	broad.mit.edu	37	7	18629971	18629971	+	Missense_Mutation	SNP	C	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:18629971C>A	uc003suh.2	+	3	309	c.268C>A	c.(268-270)CTT>ATT	p.L90I	HDAC9_uc003sue.2_Missense_Mutation_p.L90I|HDAC9_uc011jyd.1_Missense_Mutation_p.L90I|HDAC9_uc003sui.2_Missense_Mutation_p.L93I|HDAC9_uc003suj.2_Missense_Mutation_p.L93I|HDAC9_uc011jya.1_Missense_Mutation_p.L131I|HDAC9_uc003sua.1_Missense_Mutation_p.L112I|HDAC9_uc011jyb.1_Missense_Mutation_p.L90I|HDAC9_uc003sud.1_Missense_Mutation_p.L90I|HDAC9_uc011jyc.1_Missense_Mutation_p.L93I|HDAC9_uc003suf.1_Missense_Mutation_p.L121I|HDAC9_uc010kud.1_Missense_Mutation_p.L93I|HDAC9_uc011jye.1_Missense_Mutation_p.L62I|HDAC9_uc011jyf.1_Missense_Mutation_p.L59I|HDAC9_uc010kue.1_5'UTR	NM_058176	NP_478056	Q9UKV0	HDAC9_HUMAN	histone deacetylase 9 isoform 1	90					B cell differentiation|cellular response to insulin stimulus|heart development|histone H3 deacetylation|histone H4 deacetylation|inflammatory response|negative regulation of transcription from RNA polymerase II promoter|negative regulation of transcription, DNA-dependent|peptidyl-lysine deacetylation|positive regulation of cell migration involved in sprouting angiogenesis|regulation of skeletal muscle fiber development|transcription, DNA-dependent	cytoplasm|histone deacetylase complex|histone methyltransferase complex|transcription factor complex	histone deacetylase activity (H3-K16 specific)|histone deacetylase binding|histone deacetylase binding|NAD-dependent histone deacetylase activity (H3-K14 specific)|NAD-dependent histone deacetylase activity (H3-K9 specific)|NAD-dependent histone deacetylase activity (H4-K16 specific)|protein binding|protein kinase C binding|repressing transcription factor binding|transcription corepressor activity			lung(2)|central_nervous_system(2)|kidney(1)	5	all_lung(11;0.187)				Valproic Acid(DB00313)	GCAACAGGAACTTCTAGCCAT	0.433000													18	19					9.7654e-05	0.000129813	0.007413	1	0
FAM188B	84182	broad.mit.edu	37	7	30821777	30821777	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:30821777C>T	uc003tbt.2	+	3	445	c.368C>T	c.(367-369)TCA>TTA	p.S123L	FAM188B_uc010kwe.2_Missense_Mutation_p.S94L	NM_032222	NP_115598	Q4G0A6	F188B_HUMAN	hypothetical protein LOC84182	123											0						TATGACCTTTCAGATGAAGAT	0.338000													6	20					0	0	0.021553	0	0
POM121L12	285877	broad.mit.edu	37	7	53103886	53103886	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:53103886C>T	uc003tpz.2	+	1	538	c.522C>T	c.(520-522)ACC>ACT	p.T174T		NM_182595	NP_872401	Q8N7R1	P1L12_HUMAN	POM121 membrane glycoprotein-like 12	174											0						ACCCCTGCACCCGGGAGACTC	0.582000													14	26					0	0	0.024245	0	0
Unknown	0	broad.mit.edu	37	7	64529093	64529093	+	RNA	SNP	G	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:64529093G>C	uc003ttt.1	+	6		c.789G>C			uc010kzt.1_RNA|uc003ttu.1_5'Flank					Homo sapiens cDNA clone IMAGE:4215179, partial cds.																		ATAGGGAATTGACCCCTTTTC	0.333000													3	3					0	0	0.014758	0	0
WBSCR17	64409	broad.mit.edu	37	7	71175806	71175806	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:71175806C>T	uc003tvy.2	+	10	1561	c.1561C>T	c.(1561-1563)CTC>TTC	p.L521F	WBSCR17_uc003tvz.2_Missense_Mutation_p.L220F	NM_022479	NP_071924	Q6IS24	GLTL3_HUMAN	UDP-GalNAc:polypeptide	521	Ricin B-type lectin.|Lumenal (Potential).					Golgi membrane|integral to membrane	polypeptide N-acetylgalactosaminyltransferase activity|sugar binding			skin(3)|upper_aerodigestive_tract(1)|ovary(1)|pancreas(1)|central_nervous_system(1)	7		all_cancers(73;0.2)|Lung NSC(55;0.094)|all_lung(88;0.125)				CACCACACTCCTCCCTGACAC	0.617000													28	55					0	0	0.006320	0	0
ATP6V0A4	50617	broad.mit.edu	37	7	138432306	138432306	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:138432306G>A	uc003vuf.2	-	12	1422	c.1184C>T	c.(1183-1185)CCC>CTC	p.P395L	ATP6V0A4_uc003vug.2_Missense_Mutation_p.P395L|ATP6V0A4_uc003vuh.2_Missense_Mutation_p.P395L	NM_130841	NP_570856	Q9HBG4	VPP4_HUMAN	ATPase, H+ transporting, lysosomal V0 subunit	395	Cytoplasmic (Potential).				cellular iron ion homeostasis|excretion|insulin receptor signaling pathway|ossification|regulation of pH|sensory perception of sound|transferrin transport	apical plasma membrane|brush border membrane|endosome membrane|integral to membrane|proton-transporting two-sector ATPase complex, proton-transporting domain	ATPase binding|hydrogen ion transmembrane transporter activity			pancreas(1)	1						GATGGTGTAGGGGGCTGCGGA	0.577000													13	20					0	0	0.016723	0	0
ATP6V0A4	50617	broad.mit.edu	37	7	138437391	138437391	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:138437391C>T	uc003vuf.2	-	10	1246	c.1008G>A	c.(1006-1008)AAG>AAA	p.K336K	ATP6V0A4_uc003vug.2_Silent_p.K336K|ATP6V0A4_uc003vuh.2_Silent_p.K336K	NM_130841	NP_570856	Q9HBG4	VPP4_HUMAN	ATPase, H+ transporting, lysosomal V0 subunit	336	Cytoplasmic (Potential).				cellular iron ion homeostasis|excretion|insulin receptor signaling pathway|ossification|regulation of pH|sensory perception of sound|transferrin transport	apical plasma membrane|brush border membrane|endosome membrane|integral to membrane|proton-transporting two-sector ATPase complex, proton-transporting domain	ATPase binding|hydrogen ion transmembrane transporter activity			pancreas(1)	1						CCAGTGCCCTCTTGATACGTG	0.602000													12	25					0	0	0.016723	0	0
OR2A14	135941	broad.mit.edu	37	7	143826661	143826661	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr7:143826661C>T	uc011kua.1	+	1	456	c.456C>T	c.(454-456)TTC>TTT	p.F152F		NM_001001659	NP_001001659	Q96R47	O2A14_HUMAN	olfactory receptor, family 2, subfamily A,	152	Helical; Name=4; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	Melanoma(164;0.0783)					TGTTCAGCTTCCTCCTGGCTC	0.532000													115	132					0	0	0.014410	0	0
FGL1	2267	broad.mit.edu	37	8	17739657	17739657	+	Missense_Mutation	SNP	C	T	T	rs140117264		TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:17739657C>T	uc003wxx.2	-	4	419	c.95G>A	c.(94-96)CGG>CAG	p.R32Q	FGL1_uc003wxy.2_Missense_Mutation_p.R32Q|FGL1_uc003wxz.2_Missense_Mutation_p.R32Q|FGL1_uc003wya.2_Missense_Mutation_p.R32Q|FGL1_uc003wyb.2_Missense_Mutation_p.R32Q|FGL1_uc003wyc.2_Missense_Mutation_p.R32Q|FGL1_uc003wyd.2_RNA|FGL1_uc003wye.2_Missense_Mutation_p.R82Q|FGL1_uc003wyf.2_Missense_Mutation_p.R2Q	NM_201553	NP_963847	Q08830	FGL1_HUMAN	fibrinogen-like 1 precursor	32	Potential.				signal transduction	fibrinogen complex	receptor binding				0				Colorectal(111;0.0573)|COAD - Colon adenocarcinoma(73;0.215)		GGCTCTGAGCCGCATCTGCTC	0.493000													23	47					0	0	0.021523	0	0
WRN	7486	broad.mit.edu	37	8	31000192	31000192	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:31000192C>T	uc003xio.3	+	27	4072	c.3284C>T	c.(3283-3285)CCA>CTA	p.P1095L	WRN_uc010lvk.2_Missense_Mutation_p.P562L	NM_000553	NP_000544	Q14191	WRN_HUMAN	Werner syndrome protein	1095					base-excision repair|cellular response to starvation|DNA recombination|DNA synthesis involved in DNA repair|multicellular organismal aging|nucleolus to nucleoplasm transport|positive regulation of hydrolase activity|regulation of apoptosis|replication fork processing|response to oxidative stress|response to UV-C|telomere maintenance	centrosome|nucleolus|nucleoplasm	3'-5' exonuclease activity|ATP binding|ATP-dependent 3'-5' DNA helicase activity|bubble DNA binding|four-way junction helicase activity|G-quadruplex DNA binding|magnesium ion binding|manganese ion binding|protein complex binding|protein homodimerization activity|Y-form DNA binding			ovary(2)|kidney(2)|large_intestine(1)|lung(1)|skin(1)	7		Breast(100;0.195)		KIRC - Kidney renal clear cell carcinoma(542;0.147)|Kidney(114;0.176)|Colorectal(111;0.192)		AATCAAGTACCAGTTGAATTA	0.239000			Mis|N|F|S			osteosarcoma|meningioma|others		Genes_defective_in_diseases_associated_with_sensitivity_to_DNA_damaging_agents	Werner_syndrome				26	40					0	0	0.012213	0	0
WRN	7486	broad.mit.edu	37	8	31024688	31024688	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:31024688C>T	uc003xio.3	+	34	4921	c.4133C>T	c.(4132-4134)TCT>TTT	p.S1378F	WRN_uc010lvk.2_Missense_Mutation_p.S845F	NM_000553	NP_000544	Q14191	WRN_HUMAN	Werner syndrome protein	1378					base-excision repair|cellular response to starvation|DNA recombination|DNA synthesis involved in DNA repair|multicellular organismal aging|nucleolus to nucleoplasm transport|positive regulation of hydrolase activity|regulation of apoptosis|replication fork processing|response to oxidative stress|response to UV-C|telomere maintenance	centrosome|nucleolus|nucleoplasm	3'-5' exonuclease activity|ATP binding|ATP-dependent 3'-5' DNA helicase activity|bubble DNA binding|four-way junction helicase activity|G-quadruplex DNA binding|magnesium ion binding|manganese ion binding|protein complex binding|protein homodimerization activity|Y-form DNA binding			ovary(2)|kidney(2)|large_intestine(1)|lung(1)|skin(1)	7		Breast(100;0.195)		KIRC - Kidney renal clear cell carcinoma(542;0.147)|Kidney(114;0.176)|Colorectal(111;0.192)		TTTCCCGGTTCTGAAGAGATC	0.378000			Mis|N|F|S			osteosarcoma|meningioma|others		Genes_defective_in_diseases_associated_with_sensitivity_to_DNA_damaging_agents	Werner_syndrome				15	32					0	0	0.024245	0	0
XKR4	114786	broad.mit.edu	37	8	56270377	56270377	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:56270377C>T	uc003xsf.2	+	2	978	c.946C>T	c.(946-948)CCA>TCA	p.P316S		NM_052898	NP_443130	Q5GH76	XKR4_HUMAN	XK, Kell blood group complex subunit-related	316	Helical; (Potential).					integral to membrane				pancreas(2)	2			Epithelial(17;0.000117)|all cancers(17;0.000836)			GGAAAGTGCTCCACAGCTGGT	0.468000													15	28					0	0	0.024245	0	0
CYP7A1	1581	broad.mit.edu	37	8	59409271	59409271	+	Nonsense_Mutation	SNP	A	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:59409271A>T	uc003xtm.3	-	3	863	c.800T>A	c.(799-801)TTG>TAG	p.L267*		NM_000780	NP_000771	P22680	CP7A1_HUMAN	cytochrome P450, family 7, subfamily A,	267					bile acid biosynthetic process|cellular lipid metabolic process|cellular response to cholesterol|cellular response to glucose stimulus|cholesterol catabolic process|cholesterol homeostasis|regulation of bile acid biosynthetic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	cholesterol 7-alpha-monooxygenase activity|electron carrier activity|heme binding			ovary(1)	1		all_lung(136;0.0271)|Lung NSC(129;0.0351)|all_epithelial(80;0.0554)				AAAGGTGGACAAAGTGTCATT	0.507000									Neonatal_Giant_Cell_Hepatitis				166	116					0	0	0.014410	0	0
CLVS1	157807	broad.mit.edu	37	8	62212398	62212398	+	Silent	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:62212398C>T	uc003xuh.2	+	2	336	c.12C>T	c.(10-12)GTC>GTT	p.V4V	CLVS1_uc003xug.2_Silent_p.V4V|CLVS1_uc003xui.2_Intron|CLVS1_uc010lyp.2_Silent_p.V4V	NM_173519	NP_775790	Q8IUQ0	CLVS1_HUMAN	retinaldehyde binding protein 1-like 1	4					lysosome organization	clathrin-coated vesicle|early endosome membrane|trans-Golgi network	phosphatidylinositol-3,5-bisphosphate binding|transporter activity			skin(4)|ovary(1)	5						TGGGACCAGTCTCTCTTCTTC	0.463000													10	47					0	0	0.010729	0	0
RPL7	6129	broad.mit.edu	37	8	74203428	74203428	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:74203428G>A	uc003xzg.2	-	6	620	c.598C>T	c.(598-600)CGC>TGC	p.R200C	RPL7_uc003xzh.1_Missense_Mutation_p.R160C	NM_000971	NP_000962	P18124	RL7_HUMAN	ribosomal protein L7	200					endocrine pancreas development|ribosomal large subunit biogenesis|rRNA processing|translational elongation|translational termination|viral transcription	cytosolic large ribosomal subunit	DNA binding|mRNA binding|protein homodimerization activity|structural constituent of ribosome				0	Breast(64;0.0954)		Epithelial(68;0.0193)|all cancers(69;0.0766)|BRCA - Breast invasive adenocarcinoma(89;0.134)			TCTTTGAAGCGTTTTCCAACA	0.373000													11	22					0	0	0.010729	0	0
HNF4G	3174	broad.mit.edu	37	8	76468232	76468232	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:76468232G>A	uc003yaq.2	+	7	790	c.520G>A	c.(520-522)GCT>ACT	p.A174T	HNF4G_uc003yar.2_Missense_Mutation_p.A211T	NM_004133	NP_004124	Q14541	HNF4G_HUMAN	hepatocyte nuclear factor 4, gamma	174					endocrine pancreas development|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor	nucleoplasm	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|steroid hormone receptor activity|zinc ion binding			ovary(1)	1	Breast(64;0.0448)		BRCA - Breast invasive adenocarcinoma(89;0.161)			ACTGTTGAGAGCTCACGCAGG	0.308000													30	11					0	0	0.013726	0	0
NECAB1	64168	broad.mit.edu	37	8	91937824	91937824	+	Nonsense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:91937824C>T	uc011lgg.1	+	7	750	c.556C>T	c.(556-558)CGA>TGA	p.R186*		NM_022351	NP_071746	Q8N987	NECA1_HUMAN	N-terminal EF-hand calcium binding protein 1	186					antibiotic biosynthetic process	cytoplasm	calcium ion binding|oxidoreductase activity			central_nervous_system(1)	1			BRCA - Breast invasive adenocarcinoma(11;0.0499)			ATCAAGCCGCCGAGTCCAGAG	0.453000													24	15					0	0	0.021523	0	0
KCNK9	51305	broad.mit.edu	37	8	140630869	140630869	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:140630869C>T	uc003yvf.1	-	2	821	c.757G>A	c.(757-759)GAT>AAT	p.D253N	KCNK9_uc003yvg.1_Missense_Mutation_p.D253N|KCNK9_uc003yve.1_RNA	NM_016601	NP_057685	Q9NPC2	KCNK9_HUMAN	potassium channel, subfamily K, member 9	253	Cytoplasmic (Potential).					integral to membrane|membrane fraction	potassium channel activity|voltage-gated ion channel activity			ovary(2)|lung(1)	3	all_cancers(97;3.94e-14)|all_epithelial(106;4.81e-13)|Lung NSC(106;8.18e-05)|all_lung(105;0.00015)|Ovarian(258;0.00235)|Acute lymphoblastic leukemia(118;0.155)	Ovarian(118;0.134)	BRCA - Breast invasive adenocarcinoma(115;0.0855)			CGCCGCTCATCCTCACTGTTC	0.597000													82	30					0	0	0.014410	0	0
KCNK9	51305	broad.mit.edu	37	8	140631316	140631316	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:140631316C>T	uc003yvf.1	-	2	374	c.310G>A	c.(310-312)GAT>AAT	p.D104N	KCNK9_uc003yvg.1_Missense_Mutation_p.D104N|KCNK9_uc003yve.1_RNA	NM_016601	NP_057685	Q9NPC2	KCNK9_HUMAN	potassium channel, subfamily K, member 9	104	Extracellular (Potential).					integral to membrane|membrane fraction	potassium channel activity|voltage-gated ion channel activity			ovary(2)|lung(1)	3	all_cancers(97;3.94e-14)|all_epithelial(106;4.81e-13)|Lung NSC(106;8.18e-05)|all_lung(105;0.00015)|Ovarian(258;0.00235)|Acute lymphoblastic leukemia(118;0.155)	Ovarian(118;0.134)	BRCA - Breast invasive adenocarcinoma(115;0.0855)			TTGCCCGCATCGGTGCCAGGT	0.612000													7	26					0	0	0.003080	0	0
CDKN2A	1029	broad.mit.edu	37	9	21971096	21971096	+	Nonsense_Mutation	SNP	C	A	A	rs121913384		TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:21971096C>A	uc003zpk.2	-	2	474	c.262G>T	c.(262-264)GAG>TAG	p.E88*	MTAP_uc003zpi.1_Intron|CDKN2A_uc003zpj.2_3'UTR|CDKN2A_uc010miu.2_RNA|CDKN2A_uc003zpl.2_Missense_Mutation_p.G143V	NM_000077	NP_000068	P42771	CD2A1_HUMAN	cyclin-dependent kinase inhibitor 2A isoform 1	88	ANK 3.		E -> D (in a biliary tract tumor).		cell cycle arrest|cell cycle checkpoint|G1 phase of mitotic cell cycle|G1/S transition of mitotic cell cycle|induction of apoptosis|negative regulation of cell growth|negative regulation of cell proliferation|negative regulation of cell-matrix adhesion|negative regulation of cyclin-dependent protein kinase activity|negative regulation of NF-kappaB transcription factor activity|positive regulation of macrophage apoptosis|positive regulation of smooth muscle cell apoptosis|Ras protein signal transduction|replicative senescence	cytosol|nucleus	cyclin-dependent protein kinase inhibitor activity|NF-kappaB binding|protein binding|protein binding|protein kinase binding	p.0?(1112)|p.?(13)|p.E88*(13)|p.E88E(6)|p.E88K(3)|p.H83fs*2(2)|p.E88D(2)|p.E88A(1)|p.E88G(1)|p.D84_F90del(1)|p.V82_E88del(1)|p.V82_G89>G(1)|p.E61_L94del(1)|p.R137fs*48(1)|p.A68fs*3(1)|p.E88V(1)|p.E87K(1)		haematopoietic_and_lymphoid_tissue(647)|skin(419)|upper_aerodigestive_tract(414)|central_nervous_system(381)|lung(325)|pancreas(244)|oesophagus(230)|urinary_tract(225)|pleura(94)|liver(91)|soft_tissue(79)|bone(77)|ovary(76)|biliary_tract(71)|stomach(46)|breast(46)|kidney(39)|NS(28)|thyroid(24)|cervix(23)|meninges(18)|genital_tract(15)|endometrium(13)|prostate(11)|autonomic_ganglia(10)|salivary_gland(10)|large_intestine(9)|adrenal_gland(6)|eye(4)|vulva(2)|small_intestine(1)	3678		all_cancers(5;0)|Acute lymphoblastic leukemia(3;0)|all_hematologic(3;0)|all_epithelial(2;2.37e-290)|Lung NSC(2;1.26e-139)|all_lung(2;4.48e-131)|Glioma(2;3.26e-60)|all_neural(2;2.1e-52)|Renal(3;1.07e-46)|Esophageal squamous(3;3.83e-46)|Melanoma(2;2.74e-34)|Breast(3;1.14e-11)|Ovarian(3;0.000128)|Hepatocellular(5;0.00162)|Colorectal(97;0.172)		all cancers(2;0)|GBM - Glioblastoma multiforme(3;0)|Lung(2;4.07e-74)|Epithelial(2;1.08e-61)|LUSC - Lung squamous cell carcinoma(2;3.82e-48)|LUAD - Lung adenocarcinoma(2;4.56e-26)|OV - Ovarian serous cystadenocarcinoma(39;7.64e-10)|BRCA - Breast invasive adenocarcinoma(2;5.01e-09)|STAD - Stomach adenocarcinoma(4;4.63e-07)|Kidney(2;5.79e-07)|KIRC - Kidney renal clear cell carcinoma(2;7.27e-07)|COAD - Colon adenocarcinoma(8;5.15e-05)		AGGAAGCCCTCCCGGGCAGCG	0.756000	E88*(CAL33_UPPER_AERODIGESTIVE_TRACT)	17							Uveal_Melanoma_Familial|Familial_Malignant_Melanoma_and_Tumors_of_the_Nervous_System|Hereditary_Melanoma	HNSCC(2;<9.43e_08)|TSP Lung(5;3.83e-07)			92	34					5.0909e-33	6.90609e-33	0.014410	1	0
FRMPD1	22844	broad.mit.edu	37	9	37708479	37708479	+	Nonsense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:37708479C>T	uc004aag.1	+	4	387	c.343C>T	c.(343-345)CGA>TGA	p.R115*	FRMPD1_uc004aah.1_Nonsense_Mutation_p.R115*	NM_014907	NP_055722	Q5SYB0	FRPD1_HUMAN	FERM and PDZ domain containing 1	115	PDZ.					cytoskeleton|cytosol|plasma membrane				ovary(4)|central_nervous_system(2)|skin(2)|breast(1)	9				GBM - Glioblastoma multiforme(29;0.00655)		TTCCTGGGAACGAGCAGTCGA	0.448000													12	110					0	0	0.010729	0	0
Unknown	0	broad.mit.edu	37	9	69634764	69634764	+	RNA	SNP	T	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:69634764T>C	uc004afu.3	-	3		c.307A>G								Homo sapiens aquaporin 7 pseudogene 2, mRNA (cDNA clone IMAGE:30406582).																		AGTGCGTGTGTTCCTGGCAGT	0.592000													7	27					0	0	0.010729	0	0
PCSK5	5125	broad.mit.edu	37	9	78638727	78638727	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:78638727G>A	uc004ajz.2	+	4	1023	c.485G>A	c.(484-486)GGA>GAA	p.G162E	PCSK5_uc004ajy.2_Missense_Mutation_p.G162E|PCSK5_uc004aka.2_RNA	NM_006200	NP_006191	Q92824	PCSK5_HUMAN	proprotein convertase subtilisin/kexin type 5	162	Catalytic.				anterior/posterior pattern formation|cell-cell signaling|cytokine biosynthetic process|embryo implantation|embryonic digestive tract development|embryonic skeletal system development|heart development|kidney development|limb morphogenesis|nerve growth factor processing|nerve growth factor receptor signaling pathway|peptide biosynthetic process|renin secretion into blood stream|respiratory tube development|signal peptide processing|viral assembly, maturation, egress, and release	extracellular space|Golgi lumen|stored secretory granule	peptide binding|serine-type endopeptidase activity			ovary(2)|skin(1)	3						GGCTACACGGGAAAGAACATT	0.468000													42	15					0	0	0.007835	0	0
LPPR1	54886	broad.mit.edu	37	9	104071546	104071546	+	Missense_Mutation	SNP	G	C	C			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:104071546G>C	uc004bbb.2	+	5	838	c.439G>C	c.(439-441)GTG>CTG	p.V147L	LPPR1_uc011lvi.1_Missense_Mutation_p.V123L|LPPR1_uc004bbc.2_Missense_Mutation_p.V147L|LPPR1_uc010mtc.2_Missense_Mutation_p.V131L	NM_207299	NP_997182	Q8TBJ4	LPPR1_HUMAN	plasticity related gene 3	147	Helical; (Potential).					integral to membrane	catalytic activity				0						CGCCGGACAAGTGGTCACTGG	0.428000													34	14					0	0	0.015359	0	0
COL5A1	1289	broad.mit.edu	37	9	137622145	137622145	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:137622145G>A	uc004cfe.2	+	7	1370	c.988G>A	c.(988-990)GAA>AAA	p.E330K		NM_000093	NP_000084	P20908	CO5A1_HUMAN	alpha 1 type V collagen preproprotein	330	Nonhelical region.				axon guidance|cell adhesion|collagen biosynthetic process|collagen fibril organization|eye morphogenesis|fibril organization|integrin biosynthetic process|skin development|wound healing, spreading of epidermal cells	collagen type V	heparin binding|integrin binding|platelet-derived growth factor binding|proteoglycan binding			skin(4)|ovary(3)|pancreas(2)|central_nervous_system(1)|kidney(1)	11		Myeloproliferative disorder(178;0.0341)		all cancers(34;2.28e-08)|OV - Ovarian serous cystadenocarcinoma(145;6.03e-08)|Epithelial(140;6.4e-08)|GBM - Glioblastoma multiforme(294;0.131)		GGCTGGGAAGGAAGAGGACGT	0.617000													39	18					0	0	0.023175	0	0
TUBBP5	643224	broad.mit.edu	37	9	141071110	141071110	+	Silent	SNP	A	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:141071110A>G	uc004com.2	+	4	774	c.513A>G	c.(511-513)CCA>CCG	p.P171P	TUBBP5_uc010ncq.2_3'UTR					RecName: Full=Putative tubulin beta-4q chain;												0						TGCGCTTCCCAGGCCAGCTGA	0.597000													3	30					0	0	0.014758	0	0
TUBBP5	643224	broad.mit.edu	37	9	141071340	141071340	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:141071340G>A	uc004com.2	+	4	1004	c.743G>A	c.(742-744)CGC>CAC	p.R248H	TUBBP5_uc010ncq.2_3'UTR					RecName: Full=Putative tubulin beta-4q chain;												0						TTCCAGGGTCGCATGCCCATG	0.542000													8	46					0	0	0.010729	0	0
MXRA5	25878	broad.mit.edu	37	X	3228149	3228149	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chrX:3228149G>A	uc004crg.3	-	7	8252	c.8095C>T	c.(8095-8097)CGT>TGT	p.R2699C		NM_015419	NP_056234	Q9NR99	MXRA5_HUMAN	adlican precursor	2699	Ig-like C2-type 11.					extracellular region				ovary(5)|lung(1)|central_nervous_system(1)|skin(1)	8		all_lung(23;0.00031)|Lung NSC(23;0.000946)				GAGGCCTCACGAACCGTGAGG	0.597000													32	6					0	0	0.017118	0	0
HUWE1	10075	broad.mit.edu	37	X	53620471	53620471	+	Silent	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chrX:53620471G>A	uc004dsp.2	-	32	3996	c.3594C>T	c.(3592-3594)TTC>TTT	p.F1198F	HUWE1_uc004dsn.2_Silent_p.F23F	NM_031407	NP_113584	Q7Z6Z7	HUWE1_HUMAN	HECT, UBA and WWE domain containing 1	1198					base-excision repair|cell differentiation|histone ubiquitination|protein monoubiquitination|protein polyubiquitination|protein ubiquitination involved in ubiquitin-dependent protein catabolic process	cytoplasm|nucleus	DNA binding|protein binding|ubiquitin-protein ligase activity			ovary(8)|large_intestine(4)|breast(4)|kidney(1)	17						AGGCATCTAGGAATTCTCCTG	0.498000													24	1					0	0	0.021523	0	0
OGT	8473	broad.mit.edu	37	X	70784520	70784520	+	Missense_Mutation	SNP	G	A	A			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chrX:70784520G>A	uc004eaa.1	+	19	2723	c.2506G>A	c.(2506-2508)GGG>AGG	p.G836R	BCYRN1_uc011mpt.1_Intron|OGT_uc004eab.1_Missense_Mutation_p.G826R|OGT_uc004eac.2_Missense_Mutation_p.G697R|OGT_uc004ead.2_Missense_Mutation_p.G455R	NM_181672	NP_858058	O15294	OGT1_HUMAN	O-linked GlcNAc transferase isoform 1	836					cellular response to retinoic acid|positive regulation of granulocyte differentiation|positive regulation of histone H3-K4 methylation|positive regulation of proteolysis|protein O-linked glycosylation|signal transduction	cytosol|MLL5-L complex	enzyme activator activity|protein binding|protein N-acetylglucosaminyltransferase activity			ovary(3)|kidney(1)|pancreas(1)	5	Renal(35;0.156)					TTCTCAGTACGGGTTACCAGA	0.398000													26	3					0	0	0.021523	0	0
H2BFWT	158983	broad.mit.edu	37	X	103268042	103268042	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chrX:103268042C>T	uc004elr.2	-	1	215	c.191G>A	c.(190-192)CGA>CAA	p.R64Q		NM_001002916	NP_001002916	Q7Z2G1	H2BWT_HUMAN	H2B histone family, member W, testis-specific	64					nucleosome assembly	nuclear membrane|nucleosome	DNA binding			ovary(1)	1						ATGGCGCCCTCGCTTCCTCTG	0.637000													22	5					0	0	0.014323	0	0
MTMR1	8776	broad.mit.edu	37	X	149887149	149887149	+	Missense_Mutation	SNP	C	T	T			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chrX:149887149C>T	uc004fei.2	+	3	440	c.305C>T	c.(304-306)CCA>CTA	p.P102L	MTMR1_uc011mya.1_Missense_Mutation_p.P8L|MTMR1_uc004feg.1_Missense_Mutation_p.P102L|MTMR1_uc004feh.1_Missense_Mutation_p.P110L|MTMR1_uc004fej.2_RNA|MTMR1_uc010ntf.2_RNA	NM_003828	NP_003819	Q13613	MTMR1_HUMAN	myotubularin-related protein 1	102	GRAM.					plasma membrane	protein tyrosine phosphatase activity			ovary(1)	1	Acute lymphoblastic leukemia(192;6.56e-05)					CCACTTTTCCCAGGAGAATCA	0.358000													20	7					0	0	0.010504	0	0
CYP4A22	284541	broad.mit.edu	37	1	47611598	47611601	+	Frame_Shift_Del	DEL	TAGA	-	-	rs2405599	byFrequency	TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:47611598_47611601delTAGA	uc001cqv.1	+	10	1334_1337	c.1283_1286delTAGA	c.(1282-1287)CTAGAGfs	p.L428fs	CYP4A22_uc009vyo.2_Frame_Shift_Del_p.L428fs|CYP4A22_uc009vyp.2_Frame_Shift_Del_p.L330fs	NM_001010969	NP_001010969	Q5TCH4	CP4AM_HUMAN	cytochrome P450, family 4, subfamily A,	428_429						endoplasmic reticulum membrane|microsome	alkane 1-monooxygenase activity|electron carrier activity|heme binding			skin(2)|ovary(1)|breast(1)	4						TGGCCCAACCTAGAGGTATGTGGT	0.510													105	209	---	---	---	---					
KRTCAP2	200185	broad.mit.edu	37	1	155145290	155145291	+	Frame_Shift_Ins	INS	-	G	G			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr1:155145290_155145291insG	uc001fho.2	-	2	186_187	c.160_161insC	c.(160-162)CGTfs	p.R54fs	RAG1AP1_uc010pey.1_Intron|KRTCAP2_uc001fhp.1_Frame_Shift_Ins_p.R54fs|TRIM46_uc009wpe.1_5'Flank|TRIM46_uc010pez.1_5'Flank|TRIM46_uc001fhq.2_5'Flank|TRIM46_uc001fhr.2_5'Flank|TRIM46_uc001fhs.1_5'Flank|TRIM46_uc001fht.1_5'Flank|TRIM46_uc010pfa.1_5'Flank|TRIM46_uc001fhu.1_5'Flank|TRIM46_uc009wpg.1_5'Flank|TRIM46_uc009wpf.2_5'Flank|TRIM46_uc001fhv.3_5'Flank|TRIM46_uc001fhw.1_5'Flank	NM_173852	NP_776251	Q8N6L1	KTAP2_HUMAN	keratinocyte associated protein 2	54						integral to membrane					0	all_epithelial(22;5.72e-28)|all_lung(78;2.07e-24)|all_hematologic(923;0.0359)|Hepatocellular(266;0.0877)		Epithelial(20;3.18e-10)|all cancers(21;8.39e-10)|BRCA - Breast invasive adenocarcinoma(34;0.000752)|LUSC - Lung squamous cell carcinoma(543;0.193)			GGCCAGCTGACGGCTGTACATC	0.639													32	28	---	---	---	---					
RSPH6A	81492	broad.mit.edu	37	19	46299147	46299149	+	In_Frame_Del	DEL	CCT	-	-			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr19:46299147_46299149delCCT	uc002pdm.2	-	6	2275_2277	c.2132_2134delAGG	c.(2131-2136)GAGGGC>GGC	p.E711del	RSPH6A_uc002pdl.2_In_Frame_Del_p.E447del	NM_030785	NP_110412	Q9H0K4	RSH6A_HUMAN	radial spokehead-like 1	711	Glu-rich.					intracellular				ovary(1)|central_nervous_system(1)	2						GTctcctcgccctcctcctcctc	0.409													9	151	---	---	---	---					
SFRP2	6423	broad.mit.edu	37	4	154709955	154709956	+	In_Frame_Ins	INS	-	AGC	AGC			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr4:154709955_154709956insAGC	uc003inv.1	-	1	273_274	c.32_33insGCT	c.(31-33)CTC>CTGCTC	p.11_11L>LL		NM_003013	NP_003004	Q96HF1	SFRP2_HUMAN	secreted frizzled-related protein 2 precursor	11					brain development|cardiac left ventricle morphogenesis|cell-cell signaling|dermatome development|hemopoietic stem cell proliferation|negative regulation of canonical Wnt receptor signaling pathway|negative regulation of cell growth|negative regulation of cell migration|negative regulation of epithelial cell proliferation|negative regulation of epithelial to mesenchymal transition|negative regulation of peptidyl-tyrosine phosphorylation|negative regulation of transcription, DNA-dependent|outflow tract morphogenesis|patterning of blood vessels|positive regulation of angiogenesis|positive regulation of anti-apoptosis|positive regulation of apoptosis|positive regulation of canonical Wnt receptor signaling pathway|positive regulation of cell adhesion mediated by integrin|positive regulation of cell growth|positive regulation of cell proliferation|positive regulation of fat cell differentiation|positive regulation of peptidyl-serine phosphorylation|positive regulation of transcription from RNA polymerase II promoter|regulation of stem cell division|sclerotome development	cytoplasm|extracellular matrix|extracellular space|plasma membrane	fibronectin binding|integrin binding|PDZ domain binding|receptor agonist activity|Wnt receptor activity|Wnt-protein binding			ovary(1)|central_nervous_system(1)	2	all_hematologic(180;0.093)	Renal(120;0.117)				AGGCGAGGAAGAGCAGCAGCAG	0.708													8	20	---	---	---	---					
PSCA	8000	broad.mit.edu	37	8	143762824	143762824	+	Frame_Shift_Del	DEL	G	-	-			TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr8:143762824delG	uc003ywu.2	+	2	187	c.132delG	c.(130-132)CTGfs	p.L44fs	uc003ywt.1_Intron	NM_005672	NP_005663	O43653	PSCA_HUMAN	prostate stem cell antigen preproprotein	35											0	all_cancers(97;3.96e-12)|all_epithelial(106;1.19e-08)|Lung NSC(106;0.000413)|all_lung(105;0.00106)|Medulloblastoma(13;0.00276)|all_neural(13;0.00559)|Ovarian(258;0.0254)|Acute lymphoblastic leukemia(118;0.155)					GCACCCAGCTGGGGGAGCAGT	0.632													13	8	---	---	---	---					
HRCT1	646962	broad.mit.edu	37	9	35906595	35906596	+	In_Frame_Ins	INS	-	CCC	CCC	rs58509439		TCGA-FS-A1YW-06A-11D-A197-08	TCGA-FS-A1YW-10A-01D-A199-08									Somatic	Phase_I	Capture				Illumina GAIIx	5ede8a2a-405e-4689-967b-627bff0f1496	781d7787-9f92-4774-ac27-6c679bbd3387	g.chr9:35906595_35906596insCCC	uc003zyr.1	+	1	407_408	c.311_312insCCC	c.(310-312)CAC>CACCCC	p.104_105insP	LOC158376_uc003zys.1_5'Flank	NM_001039792	NP_001034881	Q6UXD1	HRCT1_HUMAN	histidine rich carboxyl terminus 1	104_105	His-rich.					integral to membrane					0						caccaccaccaccacccccacc	0.386													9	23	---	---	---	---					
