| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/2712904/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_stad.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | STAD |
| Execution Times: | |
| Submitted: | 14:15:40 12-03-13 |
| Completed: | |
| Elapsed: | 01 hrs 03 mins 04 secs |
step 1. GDAC_clinicalDataPicker [id: 345147] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/2712904/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_02_21/stage3_params_clin_stad.tsv |
| nodeColumn | 1 |
| outPrefix | STAD |
| Output Files: | |
| STAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 14:15:41 12-03-13 |
| Completed: | 14:52:09 12-03-13 |
| Elapsed: | 00 hrs 36 mins 28 secs |
step 2. GDAC_clinicalDataPickerReport [id: 345148] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | STAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 14:15:41 12-03-13 |
| Completed: | 15:18:43 12-03-13 |
| Elapsed: | 01 hrs 03 mins 02 secs |