Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
KLHL17	339451	genome.wustl.edu	37	1	898231	898231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198317.1	+1	provisional	p.V326I	1.000	24	0%	11	54.5%	11	45.4%	benign(0.011)	tolerated(0.2)	neutral(0.050)	superfamily_Gal_oxid_central
TAS1R3	83756	genome.wustl.edu	37	1	1269651	1269651	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152228.1	+1	provisional	p.L789H	0.004	20	0%	14	28.6%	3	66.6%	possibly_damaging(0.845)	tolerated(0.39)	neutral(0.340)	HMMPfam_7tm_3
DVL1	1855	genome.wustl.edu	37	1	1277148	1277148	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004421.2	-1	reviewed	p.R168	0.999	25	0%	13	53.8%	32	31.2%	-	-	-	HMMPfam_Dishevelled
MMEL1	79258	genome.wustl.edu	37	1	2537012	2537012	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033467.3	-1	reviewed	p.G258	0.000	82	0%	32	31.2%	0	-	-	-	-	"HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain"
PRDM16	63976	genome.wustl.edu	37	1	3322095	3322095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022114.3	+1	reviewed	p.R357C	1.000	28	0%	18	72.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ARHGEF16	27237	genome.wustl.edu	37	1	3379773	3379773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014448.3	+1	reviewed	p.P42L	0.056	32	0%	13	30.8%	5	20%	benign(0)	tolerated(1)	-	NULL
LRRC47	57470	genome.wustl.edu	37	1	3703574	3703574	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020710.2	-1	validated	p.R306W	0.123	81	0%	63	49.2%	33	45.4%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	NULL
AJAP1	55966	genome.wustl.edu	37	1	4772564	4772564	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001042478.1	+1	validated	p.R212W	0.996	66	0%	29	37.9%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
NPHP4	261734	genome.wustl.edu	37	1	5967251	5967251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015102.2	-1	reviewed	p.R512Q	0.000	44	0%	29	48.3%	3	66.6%	benign(0)	tolerated(0.48)	neutral(0.011)	NULL
KCNAB2	8514	genome.wustl.edu	37	1	6155645	6155645	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003636.2	+1	reviewed	p.Y255	0.923	100	0%	65	50.8%	2	0%	-	-	-	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase
CHD5	26038	genome.wustl.edu	37	1	6202296	6202296	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015557.1	-1	provisional	p.Y776	0.937	102	0%	64	40.6%	0	-	-	-	-	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540
RNF207	388591	genome.wustl.edu	37	1	6270962	6270962	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207396.2	+1	validated	p.T325	0.835	38	0%	16	62.5%	4	75%	-	-	-	NULL
GPR153	387509	genome.wustl.edu	37	1	6314184	6314184	+	Missense_Mutation	SNP	G	G	A	rs148779940	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207370.2	-1	validated	p.A127V	1.000	77	0%	35	31.4%	2	50%	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	HMMPfam_7tm_1,superfamily_SSF81321
TAS1R1	80835	genome.wustl.edu	37	1	6639530	6639530	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138697.3	+1	reviewed	p.F804	0.998	144	0.7%	61	49.2%	1	0%	-	-	-	HMMPfam_7tm_3
KLHL21	9903	genome.wustl.edu	37	1	6653515	6653515	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014851.2	-1	provisional	p.S568	0.000	36	0%	20	20%	3	33.3%	-	-	-	NULL
CA6	765	genome.wustl.edu	37	1	9030987	9030987	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001215.2	+1	reviewed	p.R264H	0.992	132	0%	105	37.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
KIF1B	23095	genome.wustl.edu	37	1	10435430	10435430	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000355249	+1	known	p.R1803*	1.000	131	0%	118	39%	4	50%	-	-	-	NULL
CLCN6	1185	genome.wustl.edu	37	1	11896106	11896106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001286.2	+1	reviewed	p.R626C	1.000	115	0%	82	43.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CBS,HMMSmart_SM00116,superfamily_CBS-domain
TNFRSF1B	7133	genome.wustl.edu	37	1	12252977	12252977	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001066.2	+1	reviewed	p.T203	0.010	124	0%	81	46.9%	15	26.6%	-	-	-	NULL
PRAMEF2	65122	genome.wustl.edu	37	1	12919751	12919751	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_023014.1	+1	provisional	p.L164P	0.000	149	0%	193	15%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	superfamily_SSF52047
PRDM2	7799	genome.wustl.edu	37	1	14105517	14105517	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012231.4	+1	reviewed	p.E409	1.000	59	0%	48	39.6%	4	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CELA2B	51032	genome.wustl.edu	37	1	15809871	15809871	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015849.2	+1	reviewed	p.V157I	0.992	206	0%	132	47%	0	-	benign(0.126)	tolerated(1)	neutral(0.011)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
DDI2	84301	genome.wustl.edu	37	1	15953248	15953248	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032341.3	+1	provisional	p.R75*	1.000	163	0%	126	50%	2	50%	-	-	-	HMMPfam_ubiquitin,superfamily_Ubiquitin-like
ZBTB17	7709	genome.wustl.edu	37	1	16273450	16273450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003443.2	-1	validated	p.A125V	0.000	77	0%	20	35%	12	25%	benign(0.006)	tolerated(0.41)	neutral(0.015)	NULL
TMCO4	255104	genome.wustl.edu	37	1	20107148	20107148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181719.4	-1	validated	p.T35I	0.054	50	0%	26	19.2%	9	0%	benign(0.04)	deleterious(0.02)	neutral(0.386)	NULL
UBXN10	127733	genome.wustl.edu	37	1	20517120	20517120	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152376.3	+1	provisional	p.V22	0.016	26	0%	31	38.7%	17	29.4%	-	-	-	NULL
MUL1	79594	genome.wustl.edu	37	1	20827484	20827484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024544.2	-1	validated	p.A253V	1.000	62	0%	30	36.7%	16	56.2%	benign(0.04)	tolerated(1)	neutral(0.003)	NULL
EIF4G3	8672	genome.wustl.edu	37	1	21180089	21180089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003760.3	-1	validated	p.T1116M	0.880	245	0%	188	29.3%	17	23.5%	possibly_damaging(0.765)	tolerated(0.22)	neutral(0.326)	NULL
ECE1	1889	genome.wustl.edu	37	1	21551880	21551880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001397.2	-1	reviewed	p.V635M	0.993	142	0%	60	40%	82	42.6%	possibly_damaging(0.95)	deleterious(0)	deleterious(0.838)	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
ECE1	1889	genome.wustl.edu	37	1	21554507	21554507	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000436918	-1	known	p.R26C	0.980	132	0%	82	28%	80	25%	-	-	-	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
HSPG2	3339	genome.wustl.edu	37	1	22183650	22183650	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005529.5	-1	reviewed	p.R1791W	0.996	170	0%	74	36.5%	17	29.4%	-	-	-	NULL
HSPG2	3339	genome.wustl.edu	37	1	22186165	22186165	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005529.5	-1	reviewed	p.R1709*	0.031	90	0%	37	35.1%	11	36.3%	-	-	-	NULL
EPHB2	2048	genome.wustl.edu	37	1	23111494	23111494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004442.6	+1	reviewed	p.E246K	1.000	36	0%	16	56.2%	8	62.5%	probably_damaging(0.987)	deleterious(0.05)	deleterious(0.782)	PatternScan_RECEPTOR_TYR_KIN_V_2
LUZP1	7798	genome.wustl.edu	37	1	23418352	23418352	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142546.1	-1	reviewed	p.S801	0.003	187	0%	145	29%	2	0%	-	-	-	NULL
HMGCL	3155	genome.wustl.edu	37	1	24130962	24130962	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000235958	-1	known	p.T125M	1.000	59	0%	23	30.4%	64	39%	-	-	-	PatternScan_HMG_COA_LYASE,HMMPfam_HMGL-like,superfamily_Aldolase
GRHL3	57822	genome.wustl.edu	37	1	24657930	24657930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021180.2	+1	reviewed	p.R16Q	0.996	124	0%	94	40.4%	3	66.6%	possibly_damaging(0.864)	deleterious(0.03)	deleterious(0.699)	NULL
MAN1C1	57134	genome.wustl.edu	37	1	26109095	26109095	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020379.2	+1	validated	p.R557Q	1.000	182	0%	107	29%	34	44.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47
ARID1A	8289	genome.wustl.edu	37	1	27105870	27105870	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006015.4	+1	reviewed	p.C1827	1.000	60	0%	46	50%	57	50.8%	-	-	-	NULL
C1orf172	126695	genome.wustl.edu	37	1	27278168	27278168	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000374109	-1	known	p.R196*	0.991	38	0%	16	50%	33	45.4%	-	-	-	NULL
SLC9A1	6548	genome.wustl.edu	37	1	27426972	27426972	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003047.3	-1	validated	p.D758	0.122	165	0%	68	36.8%	87	44.8%	-	-	-	NULL
GPR3	2827	genome.wustl.edu	37	1	27720955	27720955	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005281.2	+1	provisional	p.R218H	1.000	183	0%	105	13.3%	0	-	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	HMMPfam_7tm_1,superfamily_SSF81321
RNU11	26824	genome.wustl.edu	37	1	28975245	28975280	+	RNA	DEL	TTCTTTACTGTTATATGTTAGGCGAAATATTACGCG	TTCTTTACTGTTATATGTTAGGCGAAATATTACGCG	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	TTCTTTACTGTTATATGTTAGGCGAAATATTACGCG	TTCTTTACTGTTATATGTTAGGCGAAATATTACGCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NR_004407.1	+1	provisional	NULL	0.000:0.001	-	-	-	-	-	-	-	-	-	-
OPRD1	4985	genome.wustl.edu	37	1	29189552	29189552	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000911.3	+1	validated	p.R292	1.000	35	0%	17	58.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
EPB41	2035	genome.wustl.edu	37	1	29385119	29385119	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203342.2	+1	reviewed	p.E413K	1.000	145	0%	235	38.7%	8	50%	possibly_damaging(0.69)	tolerated(0.12)	deleterious(0.508)	NULL
SPOCD1	90853	genome.wustl.edu	37	1	32279675	32279675	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144569.4	-1	provisional	p.K420	0.001	68	0%	61	29.5%	0	-	-	-	-	NULL
TXLNA	200081	genome.wustl.edu	37	1	32647120	32647120	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175852.3	+1	validated	p.D149	0.676	47	0%	39	46.2%	15	26.6%	-	-	-	NULL
ADC	113451	genome.wustl.edu	37	1	33562394	33562394	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052998.2	+1	validated	p.Y280	0.431	181	0%	130	39.2%	3	33.3%	-	-	-	HMMPfam_Orn_Arg_deC_N,superfamily_Alanine racemase C-terminal domain-like,superfamily_PLP-binding barrel
C1orf94	84970	genome.wustl.edu	37	1	34666479	34666479	+	Silent	SNP	C	C	T	rs149791275	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001134734.1	+1	validated	p.D372	0.972	79	0%	41	26.8%	0	-	-	-	-	NULL
MAP7D1	55700	genome.wustl.edu	37	1	36643787	36643787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018067.3	+1	provisional	p.A565T	0.000	8	0.000	9	0.444	32	28.1%	probably_damaging(0.965)	tolerated(0.84)	neutral(0.407)	NULL
THRAP3	9967	genome.wustl.edu	37	1	36748232	36748232	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005119.3	+1	validated	p.R23H	1.000	139	0%	145	29%	23	30.4%	unknown(0)	deleterious(0)	-	NULL
GRIK3	2899	genome.wustl.edu	37	1	37325450	37325450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000831.3	-1	reviewed	p.M319V	1.000	97	1%	63	31.7%	1	0%	possibly_damaging(0.588)	tolerated(0.65)	neutral(0.206)	HMMPfam_ANF_receptor,superfamily_SSF53822
GRIK3	2899	genome.wustl.edu	37	1	37325576	37325576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000831.3	-1	reviewed	p.V277M	0.999	110	0%	79	39.2%	2	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_ANF_receptor,superfamily_SSF53822
MTF1	4520	genome.wustl.edu	37	1	38289411	38289411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005955.2	-1	reviewed	p.T381M	0.020	195	0%	218	45%	2	100%	possibly_damaging(0.83)	deleterious(0.01)	deleterious(0.721)	NULL
HPCAL4	51440	genome.wustl.edu	37	1	40148355	40148355	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016257.2	-1	reviewed	p.D143	0.988	95	1.1%	67	44.8%	0	-	-	-	-	superfamily_EF-hand
PPIE	10450	genome.wustl.edu	37	1	40214583	40214583	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006112.2	+1	reviewed	p.R173C	1.000	65	0%	50	20%	19	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
PPCS	79717	genome.wustl.edu	37	1	42925433	42925433	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024664.2	+1	validated	p.N258D	1.000	120	0%	158	13.9%	71	4.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DFP,superfamily_DNA/pantothenate-metab_flavo_C
YBX1	4904	genome.wustl.edu	37	1	43166469	43166469	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004559.3	+1	validated	p.R253T	1.000	61	0%	36	38.9%	933	41.2%	possibly_damaging(0.864)	deleterious(0.01)	deleterious(0.740)	NULL
SZT2	23334	genome.wustl.edu	37	1	43905375	43905375	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015284.2	+1	predicted	p.R1427Q	0.952	116	0%	88	45.5%	3	66.6%	benign(0)	tolerated(0.38)	neutral(0.018)	NULL
ATP6V0B	533	genome.wustl.edu	37	1	44442793	44442793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004047.3	+1	reviewed	p.D166N	1.000	92	0%	67	50.7%	504	44%	probably_damaging(1)	tolerated(0.24)	deleterious(0.537)	HMMPfam_ATP-synt_C,superfamily_F1F0 ATP synthase subunit C
KLF17	128209	genome.wustl.edu	37	1	44595230	44595230	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173484.3	+1	validated	p.R96H	0.000	73	0%	34	47.1%	0	-	benign(0.004)	tolerated(1)	-	NULL
HECTD3	79654	genome.wustl.edu	37	1	45471685	45471685	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024602.5	-1	validated	p.R610Q	1.000	71	0%	37	32.4%	18	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
TOE1	114034	genome.wustl.edu	37	1	45808875	45808875	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025077.3	+1	validated	p.R345Q	0.834	65	0%	42	28.6%	11	36.3%	probably_damaging(0.988)	tolerated(0.08)	deleterious(0.738)	HMMPfam_CAF1
TESK2	10420	genome.wustl.edu	37	1	45810774	45810774	+	Missense_Mutation	SNP	C	C	T	rs186592461	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007170.2	-1	reviewed	p.R485H	0.990	146	0%	77	41.6%	7	28.5%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
RAD54L	8438	genome.wustl.edu	37	1	46740259	46740259	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142548.1	+1	reviewed	p.L580P	1.000	131	0%	88	40.9%	16	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
ATPAF1-AS1	374973	genome.wustl.edu	37	1	47138872	47138872	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145474.1	+1	predicted	p.A122V	0.001	99	0%	63	30.2%	1	0%	-	-	-	NULL
BEND5	79656	genome.wustl.edu	37	1	49208350	49208350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024603.2	-1	validated	p.S280F	1.000	133	0%	107	24.3%	14	28.5%	benign(0.28)	deleterious(0.01)	deleterious(0.492)	NULL
PODN	127435	genome.wustl.edu	37	1	53544326	53544326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153703.3	+1	validated	p.V430M	1.000	40	0%	13	53.8%	0	-	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	superfamily_SSF52047
SLC1A7	6512	genome.wustl.edu	37	1	53569136	53569136	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006671.4	-1	validated	p.S193	0.010	91	0%	34	20.6%	0	-	-	-	-	HMMPfam_SDF
SSBP3	23648	genome.wustl.edu	37	1	54723815	54723815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145716.2	-1	validated	p.P125L	1.000	68	0%	26	30.8%	5	0%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_SSDP
PCSK9	255738	genome.wustl.edu	37	1	55509595	55509595	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_174936.2	+1	reviewed	p.R96H	0.943	55	0%	37	27%	0	-	benign(0.016)	tolerated(0.15)	neutral(0.241)	superfamily_Protease propeptides/inhibitors,HMMPfam_Inhibitor_I9
USP24	23358	genome.wustl.edu	37	1	55625357	55625357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015306.2	-1	validated	p.P220H	1.000	132	0%	214	40.2%	4	25%	probably_damaging(0.992)	tolerated(0.09)	deleterious(0.744)	NULL
WDR78	79819	genome.wustl.edu	37	1	67293571	67293571	+	Missense_Mutation	SNP	C	C	A	rs78356162		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024763.4	-1	validated	p.G679V	1.000	110	0%	225	42.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_WD40 repeat-like
SLC35D1	23169	genome.wustl.edu	37	1	67507947	67507947	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015139.2	-1	reviewed	p.I234T	1.000	231	0%	332	38%	1	100%	benign(0.005)	tolerated(0.17)	neutral(0.059)	NULL
FUBP1	8880	genome.wustl.edu	37	1	78425870	78425870	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003902.3	-1	reviewed	p.P525	1.000	55	0%	67	34.3%	54	16.6%	-	-	-	NULL
GTF2B	2959	genome.wustl.edu	37	1	89318985	89318985	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001514.5	-1	reviewed	p.S288P	1.000	200	0%	237	34.2%	51	45%	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMSmart_SM00385,superfamily_Cyclin-like
GBP4	115361	genome.wustl.edu	37	1	89658703	89658703	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052941.4	-1	validated	p.A185V	0.968	169	0%	218	41.3%	0	-	benign(0)	tolerated(1)	-	HMMPfam_GBP,superfamily_SSF52540
BARHL2	343472	genome.wustl.edu	37	1	91182656	91182656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020063.1	-1	validated	p.R33C	1.000	95	0%	76	44.7%	0	-	unknown(0)	deleterious(0)	-	NULL
RWDD3	25950	genome.wustl.edu	37	1	95710013	95710013	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015485.4	+1	validated	p.L111R	0.996	164	0%	164	36%	12	50%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_RWD,HMMSmart_SM00591,superfamily_UBC-like
PTBP2	58155	genome.wustl.edu	37	1	97272008	97272008	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021190.2	+1	reviewed	p.G360S	1.000	375	0%	686	37.9%	3	66.6%	probably_damaging(0.974)	tolerated(0.07)	deleterious(0.735)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
LPPR4	9890	genome.wustl.edu	37	1	99771647	99771647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014839.4	+1	reviewed	p.R458Q	0.997	49	0%	21	52.4%	0	-	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	NULL
HIAT1	64645	genome.wustl.edu	37	1	100535201	100535201	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033055.2	+1	validated	p.A284V	1.000	246	0.4%	471	44.2%	11	63.6%	benign(0.001)	tolerated(1)	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
HENMT1	113802	genome.wustl.edu	37	1	109191481	109191481	+	Missense_Mutation	SNP	G	G	A	rs140991391	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001102592.1	-1	validated	p.R297W	0.000	119	1.7%	112	40.2%	19	52.6%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
PRPF38B	55119	genome.wustl.edu	37	1	109242529	109242529	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018061.2	+1	validated	p.R510*	1.000	38	0%	65	44.6%	53	58.4%	-	-	-	NULL
AKNAD1	254268	genome.wustl.edu	37	1	109394366	109394366	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152763.3	-1	validated	p.P307	0.015	367	0%	564	40.6%	0	-	-	-	-	NULL
FAM40A	85369	genome.wustl.edu	37	1	110596531	110596531	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033088.2	+1	validated	p.Q837H	1.000	73	1.4%	54	29.6%	30	60%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
ADORA3	140	genome.wustl.edu	37	1	112043018	112043018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000677.3	-1	reviewed	p.V171I	0.998	92	0%	81	37%	1	0%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CTTNBP2NL	55917	genome.wustl.edu	37	1	112999002	112999002	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018704.2	+1	validated	p.V296	0.003	72	0%	87	37.9%	7	28.5%	-	-	-	HMMPfam_CortBP2
RSBN1	54665	genome.wustl.edu	37	1	114340623	114340623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018364.3	-1	validated	p.D247N	1.000	100	0%	153	17.6%	6	33.3%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	NULL
SYCP1	6847	genome.wustl.edu	37	1	115469149	115469149	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003176.2	+1	validated	p.A631T	1.000	112	0%	313	35.5%	0	-	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	HMMPfam_SCP-1
TSPAN2	10100	genome.wustl.edu	37	1	115596000	115596000	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005725.4	-1	reviewed	p.T200	1.000	134	0%	214	40.7%	1	0%	-	-	-	HMMPfam_Tetraspannin
CD2	914	genome.wustl.edu	37	1	117307211	117307212	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001767.3	+1	validated	p.R241fs	0.080:0.107	-	-	-	-	-	-	-	-	-	NULL
PTGFRN	5738	genome.wustl.edu	37	1	117484366	117484366	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020440.2	+1	provisional	p.P27T	0.965	26	0%	17	47.1%	19	26.3%	probably_damaging(0.978)	tolerated(0.17)	deleterious(0.479)	HMMPfam_V-set,superfamily_Immunoglobulin
CD101	9398	genome.wustl.edu	37	1	117560898	117560898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004258.3	+1	validated	p.T578M	0.003	123	0%	104	16.3%	1	0%	benign(0.142)	deleterious(0.02)	neutral(0.395)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
TRIM45	80263	genome.wustl.edu	37	1	117661072	117661072	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025188.3	-1	reviewed	p.R269Q	0.433	90	0%	59	33.9%	10	30%	benign(0.008)	tolerated(0.18)	neutral(0.056)	HMMSmart_SM00502
BCL9	607	genome.wustl.edu	37	1	147086382	147086382	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004326.2	+1	reviewed	p.V176A	1.000	183	0%	200	10.5%	8	37.5%	possibly_damaging(0.792)	deleterious(0.04)	deleterious(0.646)	NULL
LOC729086	729086	genome.wustl.edu	37	1	148193828	148193828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001129280.3	+1	model	p.P164L	0.994	100	0%	55	27.3%	12	0%	-	-	-	NULL
VPS45	11311	genome.wustl.edu	37	1	150054802	150054802	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007259.3	+1	reviewed	p.A313	0.984	236	0%	273	44.7%	25	44%	-	-	-	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
ARNT	405	genome.wustl.edu	37	1	150802422	150802422	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001668.2	-1	reviewed	p.G330	1.000	90	0%	77	39%	6	50%	-	-	-	NULL
TNFAIP8L2	79626	genome.wustl.edu	37	1	151131654	151131654	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024575.3	+1	validated	p.P162fs	0.939	-	-	-	-	-	-	-	-	-	HMMPfam_DUF758
OAZ3	51686	genome.wustl.edu	37	1	151739334	151739334	+	Missense_Mutation	SNP	G	G	A	rs141059076	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016178.2	+1	reviewed	p.R46Q	1.000	143	0%	154	41.6%	1	100%	possibly_damaging(0.867)	deleterious(0)	deleterious(0.781)	NULL
RORC	6097	genome.wustl.edu	37	1	151787154	151787154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005060.3	-1	reviewed	p.V277I	0.994	55	0%	34	44.1%	2	0%	benign(0.004)	tolerated(1)	-	superfamily_Nuclear receptor ligand-binding domain
FLG2	388698	genome.wustl.edu	37	1	152329231	152329231	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001014342.2	-1	provisional	p.N344S	0.010	185	0.5%	197	32%	0	-	unknown(0)	tolerated(0.84)	-	NULL
PGLYRP3	114771	genome.wustl.edu	37	1	153276340	153276340	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052891.1	-1	provisional	p.P174	0.262	187	0%	145	26.9%	0	-	-	-	-	NULL
ATP8B2	57198	genome.wustl.edu	37	1	154300597	154300597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020452.3	+1	reviewed	p.A27T	1.000	156	0%	132	30.3%	0	-	unknown(0)	-	-	NULL
GBA	2629	genome.wustl.edu	37	1	155204997	155204997	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000157.3	-1	reviewed	p.V498	0.997	143	0%	83	42.2%	38	26.3%	-	-	-	HMMPfam_Glyco_hydro_30,superfamily_Glycosyl hydrolase domain
ASH1L	55870	genome.wustl.edu	37	1	155313213	155313213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018489.2	-1	reviewed	p.R2729C	1.000	223	0%	251	45%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BAH,HMMSmart_SM00439
ASH1L	55870	genome.wustl.edu	37	1	155448204	155448204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018489.2	-1	reviewed	p.R1486H	1.000	222	0.5%	206	44.2%	1	100%	probably_damaging(0.989)	tolerated(0.72)	neutral(0.441)	NULL
ARHGEF2	9181	genome.wustl.edu	37	1	155932911	155932911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004723.3	-1	validated	p.T235M	0.997	97	0%	47	10.6%	24	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
UBQLN4	56893	genome.wustl.edu	37	1	156011374	156011374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020131.3	-1	provisional	p.A519T	0.778	140	0%	75	41.3%	4	50%	benign(0.007)	tolerated(0.93)	-	NULL
UBQLN4	56893	genome.wustl.edu	37	1	156020972	156020972	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020131.3	-1	provisional	p.R136Q	1.000	69	0%	25	24%	7	42.8%	unknown(0)	tolerated(0.36)	-	NULL
C1orf85	112770	genome.wustl.edu	37	1	156262860	156262860	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144580.1	-1	provisional	p.Y399C	0.268	54	0%	33	12.1%	34	5.8%	benign(0.001)	tolerated(0.18)	neutral(0.056)	NULL
ISG20L2	81875	genome.wustl.edu	37	1	156697248	156697248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030980.1	-1	provisional	p.T66M	0.000	58	0%	47	40.4%	16	37.5%	benign(0.004)	tolerated(0.1)	neutral(0.286)	NULL
INSRR	3645	genome.wustl.edu	37	1	156814409	156814409	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014215.1	-1	validated	p.T861I	1.000	77	0%	30	43.3%	0	-	benign(0.124)	tolerated(0.19)	neutral(0.060)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CD5L	922	genome.wustl.edu	37	1	157804401	157804401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005894.2	-1	validated	p.A172T	0.968	98	0%	53	32.1%	0	-	possibly_damaging(0.907)	deleterious(0)	deleterious(0.805)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
OR6P1	128366	genome.wustl.edu	37	1	158533230	158533230	+	Silent	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000334632	-1	known	p.L55	0.988	54	0%	44	31.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
FCER1A	2205	genome.wustl.edu	37	1	159272661	159272661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002001.2	+1	reviewed	p.A25T	0.039	424	0%	491	39.3%	1	0%	benign(0.017)	tolerated(0.23)	neutral(0.042)	superfamily_SSF48726
CRP	1401	genome.wustl.edu	37	1	159683707	159683707	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000567.2	-1	reviewed	p.V95M	0.436	190	0%	232	37.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases
ATP1A2	477	genome.wustl.edu	37	1	160099971	160099971	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000702.3	+1	reviewed	p.R514Q	1.000	42	0%	35	11.4%	12	0%	probably_damaging(0.979)	tolerated(0.05)	deleterious(0.767)	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665
ATP1A4	480	genome.wustl.edu	37	1	160145951	160145951	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144699.3	+1	reviewed	p.T794M	0.993	209	0%	150	36%	3	66.6%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	superfamily_Calcium ATPase transmembrane domain M
COPA	1314	genome.wustl.edu	37	1	160283780	160283780	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098398.1	-1	reviewed	p.R281Q	1.000	45	0%	62	50%	13	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like
ARHGAP30	257106	genome.wustl.edu	37	1	161018208	161018208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001025598.1	-1	validated	p.A868V	0.004	166	0%	108	35.2%	10	0%	benign(0)	deleterious(0)	neutral(0.445)	NULL
NDUFS2	4720	genome.wustl.edu	37	1	161180394	161180394	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004550.4	+1	reviewed	p.R294W	0.998	138	0%	101	40.6%	84	39.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Complex1_49kDa,superfamily_SSF56762
NR1I3	9970	genome.wustl.edu	37	1	161205693	161205693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001077482.1	-1	reviewed	p.R61H	1.000	146	0%	126	42.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_ZnF_C4,superfamily_SSF57716
OLFML2B	25903	genome.wustl.edu	37	1	161969985	161969985	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015441.1	-1	provisional	p.P289	0.072	46	0%	47	51.1%	2	0%	-	-	-	NULL
POU2F1	5451	genome.wustl.edu	37	1	167358897	167358897	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002697.2	+1	provisional	p.R273*	1.000	426	0%	348	12.6%	3	0%	-	-	-	NULL
CD247	919	genome.wustl.edu	37	1	167487689	167487689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198053.2	-1	reviewed	p.A5V	0.000	112	0%	55	41.8%	1	0%	benign(0)	tolerated(0.95)	-	NULL
F5	2153	genome.wustl.edu	37	1	169521963	169521963	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000130.4	-1	reviewed	p.R376	0.991	171	0%	313	39.9%	0	-	-	-	-	superfamily_Cupredoxins
PAPPA2	60676	genome.wustl.edu	37	1	176668317	176668317	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020318.2	+1	validated	p.T943M	1.000	78	0%	53	41.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Peptidase_M43
ABL2	27	genome.wustl.edu	37	1	179079565	179079565	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007314.3	-1	reviewed	p.A559	0.011	182	0%	176	33%	2	0%	-	-	-	superfamily_Protein kinase-like (PK-like)
TOR1AIP1	26092	genome.wustl.edu	37	1	179887078	179887078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015602.2	+1	validated	p.A486T	0.962	98	0%	91	39.6%	26	53.8%	-	-	-	HMMPfam_LAP1C
CEP350	9857	genome.wustl.edu	37	1	179965742	179965742	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014810.4	+1	reviewed	p.H150	0.000	86	0%	127	30.7%	0	-	-	-	-	NULL
RGSL1	353299	genome.wustl.edu	37	1	182491223	182491223	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001137669.1	+1	validated	p.R637M	0.288	99	0%	174	42.5%	0	-	-	-	-	superfamily_Regulator of G-protein signaling RGS
RNASEL	6041	genome.wustl.edu	37	1	182550480	182550480	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021133.2	-1	reviewed	p.T595	0.637	230	0%	376	46.8%	1	100%	-	-	-	HMMPfam_Ribonuc_2-5A
FAM5C	339479	genome.wustl.edu	37	1	190130013	190130013	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_199051.1	-1	provisional	p.F323L	1.000	104	0%	147	40.8%	0	-	possibly_damaging(0.94)	deleterious(0.02)	deleterious(0.768)	NULL
ASPM	259266	genome.wustl.edu	37	1	197073483	197073483	+	Missense_Mutation	SNP	C	C	T	rs181624297	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018136.4	-1	reviewed	p.R1633H	0.189	100	0%	126	42.1%	1	0%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZBTB41	360023	genome.wustl.edu	37	1	197168600	197168600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_194314.2	-1	validated	p.P335H	0.144	176	0%	256	38.3%	1	100%	benign(0.072)	tolerated(0.23)	neutral(0.046)	NULL
CAMSAP2	23271	genome.wustl.edu	37	1	200818158	200818158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203459.1	+1	validated	p.R754M	1.000	67	0%	90	31.1%	4	75%	possibly_damaging(0.846)	deleterious(0.05)	deleterious(0.670)	NULL
TNNI1	7135	genome.wustl.edu	37	1	201380578	201380578	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003281.3	-1	reviewed	p.D121	0.941	143	0%	87	50.6%	1	0%	-	-	-	HMMPfam_Troponin
NAV1	89796	genome.wustl.edu	37	1	201687682	201687682	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020443.4	+1	reviewed	p.T342M	0.938	25	0%	17	41.2%	0	-	possibly_damaging(0.945)	deleterious(0.02)	deleterious(0.772)	NULL
NAV1	89796	genome.wustl.edu	37	1	201778306	201778306	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020443.4	+1	reviewed	p.D1405Y	1.000	119	0%	83	44.6%	6	33.3%	possibly_damaging(0.951)	deleterious(0)	deleterious(0.839)	NULL
LMOD1	25802	genome.wustl.edu	37	1	201868736	201868736	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012134.2	-1	reviewed	p.R469C	1.000	154	0%	93	36.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tropomodulin,superfamily_SSF52047
KDM5B	10765	genome.wustl.edu	37	1	202718080	202718080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006618.3	-1	validated	p.R670H	0.584	62	0%	81	39.5%	18	66.6%	possibly_damaging(0.812)	deleterious(0.04)	deleterious(0.654)	NULL
DSTYK	25778	genome.wustl.edu	37	1	205119906	205119906	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015375.2	-1	reviewed	p.R790H	1.000	83	0%	51	25.5%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SRGAP2	23380	genome.wustl.edu	37	1	206566199	206566199	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000414359	+1	known	p.R137C	1.000	345	0%	321	14.3%	18	11.1%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
SRGAP2	23380	genome.wustl.edu	37	1	206631980	206631980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000367123	+1	known	p.R158H	1.000	61	0%	30	30%	3	0%	possibly_damaging(0.935)	deleterious(0.02)	deleterious(0.764)	NULL
PLXNA2	5362	genome.wustl.edu	37	1	208225778	208225778	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025179.3	-1	reviewed	p.R963*	1.000	93	0%	74	29.7%	4	0%	-	-	-	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
NEK2	4751	genome.wustl.edu	37	1	211836779	211836779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002497.2	-1	validated	p.G443C	1.000	69	0%	52	50%	15	73.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PTPN14	5784	genome.wustl.edu	37	1	214638115	214638115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005401.4	-1	reviewed	p.R11Q	1.000	80	0%	26	42.3%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
KCTD3	51133	genome.wustl.edu	37	1	215781387	215781387	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000452413	+1	known	p.V78M	0.338	110	0%	138	39.1%	19	42.1%	-	-	-	NULL
USH2A	7399	genome.wustl.edu	37	1	215822097	215822097	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_206933.2	-1	reviewed	p.G4785	0.420	91	0%	47	21.3%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216108126	216108126	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_206933.2	-1	reviewed	p.Y2378H	1.000	87	0%	136	11%	0	-	probably_damaging(0.992)	tolerated(0.23)	deleterious(0.489)	HMMSmart_SM00060,superfamily_Fibronectin type III
HHIPL2	79802	genome.wustl.edu	37	1	222696957	222696957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024746.3	-1	validated	p.A629T	0.835	194	0%	113	39.8%	0	-	benign(0.005)	tolerated(0.1)	neutral(0.286)	NULL
WDR26	80232	genome.wustl.edu	37	1	224581563	224581563	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025160.6	-1	reviewed	p.P496S	1.000	108	0%	93	38.7%	50	40%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
DNAH14	127602	genome.wustl.edu	37	1	225195127	225195127	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001373.1	+1	validated	p.R330*	0.997	85	0%	191	35.6%	0	-	-	-	-	NULL
ACBD3	64746	genome.wustl.edu	37	1	226349289	226349289	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022735.3	-1	reviewed	p.R224Q	0.998	363	0%	557	36.3%	17	52.9%	unknown(0)	tolerated(0.29)	-	NULL
OBSCN	84033	genome.wustl.edu	37	1	228460993	228460993	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000359599	+1	known	p.K514E	1.000	49	0%	25	28%	0	-	probably_damaging(0.959)	tolerated(0.51)	neutral(0.412)	HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228466411	228466411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098623.1	+1	reviewed	p.R2294H	1.000	57	0%	20	25%	1	0%	probably_damaging(0.999)	-	-	HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228504534	228504534	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098623.1	+1	reviewed	p.G4470	0.000	13	0.000	9	0.444	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
RAB4A	5867	genome.wustl.edu	37	1	229438687	229438687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004578.2	+1	provisional	p.R207H	0.984	65	0%	56	41.1%	140	40.7%	possibly_damaging(0.643)	tolerated(0.07)	deleterious(0.544)	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
NUP133	55746	genome.wustl.edu	37	1	229636604	229636604	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018230.2	-1	reviewed	p.V138I	0.969	50	0%	72	41.7%	6	50%	benign(0.002)	tolerated(0.7)	neutral(0.002)	HMMPfam_Nup133_N
TAF5L	27097	genome.wustl.edu	37	1	229730560	229730560	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014409.3	-1	reviewed	p.P418	0.003	64	0%	35	37.1%	12	50%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
URB2	9816	genome.wustl.edu	37	1	229783376	229783376	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014777.2	+1	provisional	p.H1342	0.784	89	0%	48	35.4%	9	44.4%	-	-	-	HMMPfam_Urb2
NTPCR	84284	genome.wustl.edu	37	1	233105748	233105748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032324.1	+1	provisional	p.R130C	0.999	121	0%	108	46.3%	76	32.8%	benign(0.18)	tolerated(0.05)	neutral(0.362)	HMMSmart_SM00382,HMMPfam_DUF265,superfamily_P-loop containing nucleoside triphosphate hydrolases
HEATR1	55127	genome.wustl.edu	37	1	236719517	236719517	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018072.4	-1	validated	p.A1799	0.993	189	0%	233	51.5%	5	40%	-	-	-	superfamily_ARM-type_fold
ZP4	57829	genome.wustl.edu	37	1	238053787	238053787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021186.2	-1	reviewed	p.T50M	0.000	42	0%	39	48.7%	0	-	probably_damaging(0.99)	tolerated(0.08)	deleterious(0.742)	NULL
KIF26B	55083	genome.wustl.edu	37	1	245775171	245775171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018012.3	+1	provisional	p.R664H	0.999	47	0%	35	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNF496	84838	genome.wustl.edu	37	1	247463934	247463934	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032752.1	-1	provisional	p.R551W	0.236	72	0%	31	67.7%	43	48.8%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_SSF57667
ZNF496	84838	genome.wustl.edu	37	1	247464265	247464265	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032752.1	-1	provisional	p.C440	1.000	61	0%	27	37%	18	44.4%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
OR2C3	81472	genome.wustl.edu	37	1	247695447	247695447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198074.4	-1	validated	p.R123C	1.000	129	0%	68	42.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR2M3	127062	genome.wustl.edu	37	1	248367069	248367069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004689.1	+1	provisional	p.R234C	0.001	299	0%	323	41.2%	0	-	benign(0.003)	deleterious(0.02)	neutral(0.383)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
SNTG2	54221	genome.wustl.edu	37	2	1093882	1093882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018968.3	+1	reviewed	p.R71C	1.000	240	0%	358	44.1%	0	-	possibly_damaging(0.847)	deleterious(0.01)	deleterious(0.731)	superfamily_PDZ domain-like
PXDN	7837	genome.wustl.edu	37	2	1665927	1665927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012293.1	-1	validated	p.D533N	1.000	92	0%	39	20.5%	0	-	probably_damaging(1)	tolerated(0.76)	deleterious(0.501)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
SOX11	6664	genome.wustl.edu	37	2	5834011	5834011	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003108.3	+1	reviewed	p.A386	0.998	14	0%	13	38.5%	0	-	-	-	-	NULL
ID2	3398	genome.wustl.edu	37	2	8822498	8822498	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002166.4	+1	reviewed	p.V68A	1.000	58	0%	36	38.9%	241	39.4%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
ADAM17	6868	genome.wustl.edu	37	2	9630422	9630424	+	In_Frame_Del	DEL	TGC	TGC	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	TGC	TGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003183.4	-1	reviewed	p.S786in_frame_del	0.996:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
PDIA6	10130	genome.wustl.edu	37	2	10927485	10927485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005742.2	-1	validated	p.A360V	1.000	153	0%	147	42.2%	786	47.2%	benign(0)	tolerated(1)	-	superfamily_Thioredoxin-like
ROCK2	9475	genome.wustl.edu	37	2	11337653	11337653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004850.3	-1	reviewed	p.A1093V	1.000	183	0%	342	21.3%	12	0%	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	NULL
GEN1	348654	genome.wustl.edu	37	2	17953927	17953927	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130009.1	+1	validated	p.G277*	1.000	97	0%	118	42.4%	7	42.8%	-	-	-	superfamily_5' to 3' exonuclease C-terminal subdomain
MSGN1	343930	genome.wustl.edu	37	2	17997998	17997998	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105569.1	+1	provisional	p.H71	0.001	48	0%	25	40%	0	-	-	-	-	NULL
LAPTM4A	9741	genome.wustl.edu	37	2	20234736	20234736	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014713.4	-1	reviewed	p.I174V	1.000	127	0%	153	35.9%	443	39.7%	benign(0.001)	tolerated(0.6)	neutral(0.004)	HMMPfam_Mtp
NCOA1	8648	genome.wustl.edu	37	2	24888781	24888781	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003743.4	+1	reviewed	p.Q85*	1.000	77	0%	140	41.4%	5	40%	-	-	-	HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
DTNB	1838	genome.wustl.edu	37	2	25851164	25851164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021907.3	-1	reviewed	p.R80C	1.000	155	0%	152	28.3%	44	34%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_efhand_1,superfamily_EF-hand
GPR113	165082	genome.wustl.edu	37	2	26532963	26532963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145168.1	-1	validated	p.A1030V	0.990	104	0%	55	41.8%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
EPT1	85465	genome.wustl.edu	37	2	26569133	26569133	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000407686	+1	known	p.Q11	1.000	99	0%	55	47.3%	4	75%	-	-	-	NULL
KHK	3795	genome.wustl.edu	37	2	27320508	27320508	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000221.2	+1	reviewed	p.Y185	0.295	60	0%	26	50%	0	-	-	-	-	superfamily_Ribokinase-like
CAD	790	genome.wustl.edu	37	2	27458472	27458472	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004341.3	+1	reviewed	p.L1346	1.000	71	0%	55	38.2%	7	28.5%	-	-	-	HMMPfam_MGS,superfamily_SSF52335
IFT172	26160	genome.wustl.edu	37	2	27706492	27706492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015662.1	-1	validated	p.S146Y	1.000	224	0%	345	40.3%	2	0%	benign(0.027)	tolerated(0.44)	neutral(0.014)	HMMSmart_SM00320,superfamily_WD40 repeat-like
CLIP4	79745	genome.wustl.edu	37	2	29404678	29404678	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024692.4	+1	validated	p.P679	0.001	90	0%	76	35.5%	0	-	-	-	-	HMMPfam_CAP_GLY,superfamily_Cap-Gly domain
SULT6B1	391365	genome.wustl.edu	37	2	37398608	37398608	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001032377.1	-1	provisional	p.H212	0.961	137	0%	160	40.6%	0	-	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
THADA	63892	genome.wustl.edu	37	2	43519311	43519311	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001083953.1	-1	validated	p.T1623	0.000	104	0%	95	47.4%	10	30%	-	-	-	NULL
ABCG8	64241	genome.wustl.edu	37	2	44104732	44104732	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022437.2	+1	reviewed	p.R597W	1.000	94	0%	79	36.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ABC2_membrane
PRKCE	5581	genome.wustl.edu	37	2	46237546	46237546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005400.2	+1	reviewed	p.V443I	1.000	116	0%	139	46.8%	11	36.3%	probably_damaging(0.992)	tolerated(0.11)	deleterious(0.719)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MSH6	2956	genome.wustl.edu	37	2	48026126	48026127	+	Frame_Shift_Del	DEL	AT	AT	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000179.2	+1	reviewed	p.T336fs	0.594:0.635	-	-	-	-	-	-	-	-	-	NULL
FOXN2	3344	genome.wustl.edu	37	2	48602499	48602499	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002158.3	+1	reviewed	p.L405F	1.000	78	0%	77	42.9%	4	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PSME4	23198	genome.wustl.edu	37	2	54154580	54154580	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014614.2	-1	validated	p.P515H	1.000	143	0%	294	14.3%	11	18.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SPTBN1	6711	genome.wustl.edu	37	2	54852045	54852045	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003128.2	+1	reviewed	p.R429	1.000	67	0%	64	29.7%	13	30.7%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN1	6711	genome.wustl.edu	37	2	54858560	54858560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003128.2	+1	reviewed	p.E1126K	1.000	113	0%	55	10.9%	20	0%	benign(0.029)	deleterious(0.02)	neutral(0.385)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
RPS27A	6233	genome.wustl.edu	37	2	55461327	55461327	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001135592.2	+1	reviewed	p.Y59C	1.000	130	0%	192	33.9%	864	39.4%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
USP34	9736	genome.wustl.edu	37	2	61492625	61492625	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014709.3	-1	validated	p.G1895	1.000	99	0%	123	30.9%	4	0%	-	-	-	HMMPfam_UCH,PatternScan_UCH_2_1,superfamily_Cysteine proteinases
XPO1	7514	genome.wustl.edu	37	2	61719259	61719259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003400.3	-1	reviewed	p.V600I	1.000	155	0%	223	40.8%	83	45.7%	benign(0.019)	deleterious(0.04)	neutral(0.350)	superfamily_ARM-type_fold
XPO1	7514	genome.wustl.edu	37	2	61719526	61719526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003400.3	-1	reviewed	p.R553C	0.998	111	0%	194	34%	78	39.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
WDPCP	51057	genome.wustl.edu	37	2	63712088	63712088	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015910.4	-1	validated	p.R96H	1.000	234	0%	393	37.7%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SPRED2	200734	genome.wustl.edu	37	2	65659119	65659119	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181784.2	-1	validated	p.M1I	1.000	134	0%	121	32.2%	1	100%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
CNRIP1	25927	genome.wustl.edu	37	2	68544362	68544362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015463.2	-1	reviewed	p.T86M	0.888	154	0%	145	42.8%	3	0%	probably_damaging(0.987)	deleterious(0.03)	deleterious(0.801)	NULL
ANXA4	307	genome.wustl.edu	37	2	70035084	70035084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001153.3	+1	reviewed	p.R118Q	0.561	50	0%	34	44.1%	160	47.5%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX
ANXA4	307	genome.wustl.edu	37	2	70046463	70046463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001153.3	+1	reviewed	p.S259L	1.000	241	0%	414	37.9%	139	48.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Annexin,HMMPfam_Annexin
EXOC6B	23233	genome.wustl.edu	37	2	72945427	72945427	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015189.1	-1	validated	p.P158	0.996	139	0.7%	110	43.6%	2	0%	-	-	-	NULL
PRADC1	84279	genome.wustl.edu	37	2	73455925	73455925	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032319.1	-1	provisional	p.D148	1.000	35	0%	19	42.1%	53	62.2%	-	-	-	HMMPfam_PA,superfamily_Transferrin receptor ectodomain apical domain
AUP1	550	genome.wustl.edu	37	2	74755981	74755981	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181575.3	-1	reviewed	p.S141P	1.000	57	0%	34	32.4%	134	44%	probably_damaging(0.977)	tolerated(0.14)	deleterious(0.668)	HMMSmart_PlsC
SEMA4F	10505	genome.wustl.edu	37	2	74902718	74902718	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004263.3	+1	provisional	p.L480S	0.995	172	0%	129	45%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
FAM176A	84141	genome.wustl.edu	37	2	75720644	75720644	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001135032.1	-1	validated	p.C59W	1.000	37	0%	25	52%	1	0%	benign(0.049)	deleterious(0.03)	neutral(0.367)	NULL
LRRTM1	347730	genome.wustl.edu	37	2	80530635	80530635	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178839.4	-1	validated	p.V104M	1.000	143	0%	84	27.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LRR_1,superfamily_SSF52058
KCMF1	56888	genome.wustl.edu	37	2	85255017	85255017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020122.4	+1	validated	p.S8G	1.000	118	0%	217	42.9%	18	38.8%	possibly_damaging(0.559)	deleterious(0.01)	deleterious(0.596)	HMMPfam_ZZ,HMMSmart_ZnF_ZZ
TEKT4	150483	genome.wustl.edu	37	2	95541339	95541339	+	Missense_Mutation	SNP	C	C	T	rs193072346	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144705.2	+1	provisional	p.R315W	1.000	300	0%	245	40.4%	1	0%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMPfam_Tektin
MRPS5	64969	genome.wustl.edu	37	2	95753290	95753290	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031902.3	-1	reviewed	p.H369fs	0.998	-	-	-	-	-	-	-	-	-	NULL
KCNIP3	30818	genome.wustl.edu	37	2	96040619	96040619	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013434.4	+1	reviewed	p.D110	0.938	61	0%	42	50%	0	-	-	-	-	superfamily_EF-hand
CIAO1	9391	genome.wustl.edu	37	2	96934237	96934237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004804.2	+1	validated	p.R178W	1.000	152	0%	114	31.6%	24	33.3%	probably_damaging(0.957)	tolerated(0.05)	deleterious(0.746)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
FER1L5	90342	genome.wustl.edu	37	2	97368124	97368124	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001113382.1	+1	provisional	p.D1783	1.000	57	0%	33	39.4%	0	-	-	-	-	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
TMEM131	23505	genome.wustl.edu	37	2	98435150	98435150	+	Missense_Mutation	SNP	G	G	A	rs187747732	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015348.1	-1	validated	p.T370M	1.000	282	0%	508	38.6%	5	40%	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	NULL
AFF3	3899	genome.wustl.edu	37	2	100170917	100170917	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001025108.1	-1	reviewed	p.A1164T	0.000	130	0%	62	48.4%	2	50%	benign(0)	tolerated(0.2)	neutral(0.049)	HMMPfam_AF-4
TBC1D8	11138	genome.wustl.edu	37	2	101624479	101624479	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001102426.1	-1	validated	p.A1076V	0.000	87	0%	92	41.3%	72	33.3%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
TMEM87B	84910	genome.wustl.edu	37	2	112856184	112856184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032824.2	+1	validated	p.R429C	1.000	523	0%	690	42.2%	14	57.1%	possibly_damaging(0.888)	deleterious(0)	deleterious(0.792)	HMMPfam_Lung_7-TM_R
RGPD8	727851	genome.wustl.edu	37	2	113127769	113127769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000302558	-1	known	p.R1762C	1.000	207	0%	375	13.3%	2	0%	unknown(0)	deleterious(0)	-	NULL
MARCO	8685	genome.wustl.edu	37	2	119752091	119752091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006770.3	+1	reviewed	p.V520I	0.006	116	0%	54	44.4%	2	0%	benign(0.05)	-	-	NULL
STEAP3	55240	genome.wustl.edu	37	2	120020847	120020847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182915.2	+1	validated	p.R477M	0.733	68	0%	23	47.8%	53	18.8%	benign(0.257)	deleterious(0.01)	neutral(0.432)	NULL
CNTNAP5	129684	genome.wustl.edu	37	2	124999868	124999868	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_130773.2	+1	reviewed	p.T93	0.441	94	0%	92	38%	0	-	-	-	-	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,superfamily_Gal_bind_like
CNTNAP5	129684	genome.wustl.edu	37	2	125521376	125521376	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_130773.2	+1	reviewed	p.R787*	1.000	123	0%	176	40.9%	0	-	-	-	-	superfamily_ConA_like_lec_gl
MYO7B	4648	genome.wustl.edu	37	2	128393413	128393413	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080527.1	+1	provisional	p.V1953	0.744	73	0%	35	22.9%	1	0%	-	-	-	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
ARHGEF4	50649	genome.wustl.edu	37	2	131797621	131797621	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015320.2	+1	reviewed	p.D260	0.020	25	0%	18	50%	0	-	-	-	-	superfamily_SH3-domain
POTEE	445582	genome.wustl.edu	37	2	132021143	132021143	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001083538.1	+1	validated	p.T705	1.000	177	0%	253	16.6%	0	-	-	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
LOC100127989	100127989	genome.wustl.edu	37	2	132294518	132294518	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001724172.1	-1	model	p.V45	1.000	90	1.1%	45	20%	0	-	-	-	-	NULL
NEB	4703	genome.wustl.edu	37	2	152384042	152384042	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004543.4	-1	reviewed	p.R5564	0.998	136	0%	115	53.9%	0	-	-	-	-	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152410411	152410411	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004543.4	-1	reviewed	p.H4818	0.991	157	0%	123	12.2%	1	0%	-	-	-	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152435934	152435934	+	Missense_Mutation	SNP	C	C	T	rs182029307	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000413693	-1	known	p.R271H	1.000	650	0%	489	26.6%	0	-	probably_damaging(0.995)	-	-	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152534188	152534188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004543.4	-1	reviewed	p.A1222V	1.000	253	0%	273	37%	0	-	possibly_damaging(0.696)	tolerated(0.35)	neutral(0.270)	HMMSmart_SM00227
LY75	4065	genome.wustl.edu	37	2	160731975	160731975	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002349.2	-1	validated	p.A652T	0.069	97	0%	140	12.9%	4	0%	benign(0)	tolerated(0.43)	neutral(0.013)	HMMSmart_SM00034,superfamily_C-type lectin-like
KLHL23	151230	genome.wustl.edu	37	2	170592350	170592350	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144711.4	+1	validated	p.Y276H	1.000	77	0%	76	42.1%	6	50%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
WIPF1	7456	genome.wustl.edu	37	2	175436684	175436684	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001077269.1	-1	reviewed	p.P283	0.000	77	0%	46	52.2%	10	40%	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179400726	179400726	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.A31013V	1.000	102	0%	118	44.1%	0	-	benign(0.1)	-	-	HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179401719	179401719	+	Missense_Mutation	SNP	C	C	T	rs55880786		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.G30803S	1.000	94	0%	104	13.5%	1	0%	probably_damaging(0.996)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179419345	179419345	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.S27007R	1.000	158	0%	114	49.1%	0	-	probably_damaging(0.997)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179419672	179419672	+	Missense_Mutation	SNP	C	C	T	rs143193258	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.R26935H	1.000	135	0%	124	43.5%	0	-	probably_damaging(0.999)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179436729	179436729	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.K22140N	1.000	112	0.9%	82	37.8%	0	-	possibly_damaging(0.845)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179453923	179453923	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_133378.4	-1	reviewed	p.*18275W	0.238	91	1.1%	92	31.5%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179473629	179473629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.P14802L	1.000	173	0%	259	25.5%	0	-	benign(0.049)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179597401	179597401	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356127	-1	known	p.P4219S	1.000	174	0%	160	40.6%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
SESTD1	91404	genome.wustl.edu	37	2	180008405	180008405	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178123.4	-1	validated	p.R255*	1.000	229	0%	307	36.8%	13	23%	-	-	-	NULL
NEUROD1	4760	genome.wustl.edu	37	2	182543214	182543214	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002500.2	-1	reviewed	p.R125H	1.000	138	0%	104	44.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
COL3A1	1281	genome.wustl.edu	37	2	189854839	189854839	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000090.3	+1	reviewed	p.P236	0.000	130	0%	174	42.5%	13	0%	-	-	-	HMMPfam_Collagen
ANKAR	150709	genome.wustl.edu	37	2	190584478	190584478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144708.3	+1	validated	p.R731H	1.000	180	0%	198	39.4%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
MSTN	2660	genome.wustl.edu	37	2	190927105	190927105	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005259.2	-1	reviewed	p.S73N	1.000	264	0%	360	29.2%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_TGFb_propeptide
MFSD6	54842	genome.wustl.edu	37	2	191301949	191301949	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017694.3	+1	validated	p.N398	0.000	113	0%	70	38.6%	21	42.8%	-	-	-	superfamily_MFS_gen_substrate_transporter
SLC39A10	57181	genome.wustl.edu	37	2	196548468	196548468	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001127257.1	+1	validated	p.N352D	0.999	137	0%	263	44.5%	3	0%	benign(0.002)	tolerated(0.9)	-	NULL
MARS2	92935	genome.wustl.edu	37	2	198571078	198571078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138395.2	+1	validated	p.A317T	1.000	90	0%	61	36.1%	2	100%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_tRNA-synt_1g,superfamily_SSF52374
PLCL1	5334	genome.wustl.edu	37	2	198950305	198950305	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006226.3	+1	validated	p.N590	0.848	35	0%	37	40.5%	0	-	-	-	-	HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_PLC-like_Pdiesterase_TIM-brl
SATB2	23314	genome.wustl.edu	37	2	200173524	200173524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015265.3	-1	reviewed	p.R567C	1.000	86	0%	39	38.5%	0	-	benign(0.274)	deleterious(0)	deleterious(0.474)	NULL
TRAK2	66008	genome.wustl.edu	37	2	202251189	202251189	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015049.2	-1	validated	p.H572R	0.997	108	0%	132	37.1%	8	37.5%	possibly_damaging(0.449)	deleterious(0.04)	deleterious(0.496)	NULL
MAP2	4133	genome.wustl.edu	37	2	210570332	210570332	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002374.3	+1	reviewed	p.R1538H	1.000	96	0%	117	33.3%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UNC80	285175	genome.wustl.edu	37	2	210683747	210683747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032504.1	+1	validated	p.A575V	1.000	121	0%	110	41.8%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
UNC80	285175	genome.wustl.edu	37	2	210761101	210761101	+	Silent	SNP	G	G	A	rs143838455	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032504.1	+1	validated	p.A1449	0.047	206	0%	162	13%	0	-	-	-	-	NULL
UNC80	285175	genome.wustl.edu	37	2	210791672	210791672	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032504.1	+1	validated	p.L1857P	0.998	186	0%	130	40.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ATIC	471	genome.wustl.edu	37	2	216191614	216191614	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004044.6	+1	reviewed	p.V201I	0.011	113	0%	91	35.2%	30	43.3%	benign(0)	tolerated(0.25)	neutral(0.037)	HMMPfam_AICARFT_IMPCHas,HMMSmart_AICARFT_IMPCHas,superfamily_AICARFT_IMPCHas_formly
FN1	2335	genome.wustl.edu	37	2	216230227	216230227	+	Splice_Site	SNP	C	C	T	rs112323657	byCluster	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_212482.1	-1	reviewed	e43+1	1.000	222	0%	254	43.7%	1	100%	-	-	-	-
FN1	2335	genome.wustl.edu	37	2	216256432	216256432	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_212482.1	-1	reviewed	p.R1392H	0.998	135	0%	142	12%	7	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
CXCR2	3579	genome.wustl.edu	37	2	219000146	219000146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001557.3	+1	reviewed	p.R208W	0.983	149	0.7%	89	27%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CRYBA2	1412	genome.wustl.edu	37	2	219857805	219857805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005209.1	-1	reviewed	p.D32N	1.000	26	0%	10	70%	0	-	possibly_damaging(0.494)	deleterious(0.02)	deleterious(0.547)	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
CCDC108	255101	genome.wustl.edu	37	2	219896006	219896006	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_194302.2	-1	provisional	p.T279	0.854	38	0%	17	41.2%	0	-	-	-	-	superfamily_PapD-like
SPEG	10290	genome.wustl.edu	37	2	220309647	220309647	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000451076	+1	known	p.G44S	1.000	29	0%	10	70%	0	-	-	-	-	NULL
STK11IP	114790	genome.wustl.edu	37	2	220471828	220471828	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000456909	+1	known	p.P396	0.892	101	0%	82	31.7%	15	40%	-	-	-	NULL
EPHA4	2043	genome.wustl.edu	37	2	222301253	222301253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004438.3	-1	reviewed	p.S738P	1.000	107	0%	72	41.7%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
EPHA4	2043	genome.wustl.edu	37	2	222428681	222428681	+	Missense_Mutation	SNP	C	C	T	rs184759178	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004438.3	-1	reviewed	p.R198H	1.000	466	0%	383	42.8%	4	0%	benign(0.2)	tolerated(0.08)	neutral(0.319)	HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1,superfamily_Gal_bind_like
CCL20	6364	genome.wustl.edu	37	2	228681053	228681053	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004591.2	+1	validated	p.C74	0.985	151	0%	233	37.8%	174	33.9%	-	-	-	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines
ENSG00000252333	0	genome.wustl.edu	37	2	230802537	230802537	+	RNA	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000516524	-1	novel	NULL	0.353	11	0%	41	41.5%	0	-	-	-	-	-
SP110	3431	genome.wustl.edu	37	2	231033860	231033860	+	Missense_Mutation	SNP	C	C	T	rs181058279	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080424.2	-1	reviewed	p.G708S	0.000	99	0%	150	16.7%	1	100%	benign(0)	tolerated(0.93)	-	NULL
SP100	6672	genome.wustl.edu	37	2	231333811	231333811	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000341950	+1	known	p.Q449*	0.705	124	0%	283	42.8%	77	57.1%	-	-	-	NULL
NCL	4691	genome.wustl.edu	37	2	232320272	232320272	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005381.2	-1	reviewed	p.D632	1.000	191	0.5%	179	36.3%	643	44.4%	-	-	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
SAG	6295	genome.wustl.edu	37	2	234250956	234250956	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000541.4	+1	reviewed	p.P362	0.563	316	0%	340	15.6%	0	-	-	-	-	HMMPfam_Arrestin_C,superfamily_Ig_E-set
UGT1A4	54657	genome.wustl.edu	37	2	234681014	234681014	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007120.2	+1	reviewed	p.A472T	1.000	103	0%	67	38.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UDPGT
TRPM8	79054	genome.wustl.edu	37	2	234891731	234891731	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024080.4	+1	validated	p.A875V	0.995	104	0%	66	42.4%	0	-	probably_damaging(0.981)	tolerated(0.52)	neutral(0.434)	HMMPfam_Ion_trans
COL6A3	1293	genome.wustl.edu	37	2	238277696	238277696	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004369.3	-1	reviewed	p.P1470	0.569	87	0%	75	38.7%	2	0%	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
ESPNL	339768	genome.wustl.edu	37	2	239039024	239039024	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_194312.2	+1	validated	p.R557W	0.974	20	0%	11	63.6%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
TRAF3IP1	26146	genome.wustl.edu	37	2	239237705	239237705	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015650.3	+1	validated	p.R213G	0.017	126	0%	148	29.1%	8	25%	benign(0.343)	tolerated(0.21)	neutral(0.152)	HMMPfam_MIP-T3
ANKMY1	51281	genome.wustl.edu	37	2	241468562	241468562	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016552.2	-1	validated	p.R193H	0.000	215	0%	242	11.6%	3	0%	benign(0.004)	tolerated(0.43)	neutral(0.013)	NULL
AQP12B	653437	genome.wustl.edu	37	2	241619821	241619821	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001102467.1	-1	validated	p.S224	0.897	306	0%	166	21.1%	0	-	-	-	-	superfamily_MIP
ATG4B	23192	genome.wustl.edu	37	2	242590686	242590686	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000344376	+1	known	p.T38M	0.486	231	0%	288	42.4%	28	39.2%	-	-	-	HMMPfam_Peptidase_C54
ATG4B	23192	genome.wustl.edu	37	2	242606118	242606118	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013325.4	+1	reviewed	p.S199	0.000	38	0%	32	43.8%	67	49.2%	-	-	-	HMMPfam_Peptidase_C54
CNTN4	152330	genome.wustl.edu	37	3	3097812	3097812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175607.1	+1	reviewed	p.A997T	1.000	173	0%	180	42.8%	0	-	benign(0.023)	deleterious(0.01)	neutral(0.407)	NULL
ITPR1	3708	genome.wustl.edu	37	3	4836840	4836840	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001099952.2	+1	reviewed	p.A2252	0.342	257	0%	256	38.7%	8	62.5%	-	-	-	NULL
ARL8B	55207	genome.wustl.edu	37	3	5220419	5220419	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000419534	+1	known	p.Q148R	0.062	166	0%	334	41%	44	43.1%	unknown(0)	deleterious(0)	-	HMMPfam_Arf
TATDN2	9797	genome.wustl.edu	37	3	10290981	10290981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014760.3	+1	validated	p.A33T	1.000	22	0%	12	41.7%	5	60%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	NULL
TAMM41	132001	genome.wustl.edu	37	3	11850997	11850997	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138807.2	-1	provisional	p.R290*	0.768	200	0%	256	39.5%	11	27.2%	-	-	-	HMMPfam_Mmp37
PPARG	5468	genome.wustl.edu	37	3	12475421	12475421	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015869.4	+1	reviewed	p.K432T	1.000	96	0%	64	14.1%	6	0%	possibly_damaging(0.865)	tolerated(0.06)	deleterious(0.657)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
FBLN2	2199	genome.wustl.edu	37	3	13659594	13659594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004019.1	+1	reviewed	p.A583V	0.000	60	0%	22	31.8%	1	100%	benign(0.122)	deleterious(0.04)	neutral(0.359)	NULL
FGD5	152273	genome.wustl.edu	37	3	14861998	14861998	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152536.3	+1	validated	p.D474N	1.000	49	0%	27	33.3%	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FGD5	152273	genome.wustl.edu	37	3	14964027	14964027	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152536.3	+1	validated	p.R1260Q	0.976	60	0%	18	38.9%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FYVE,HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1
KAT2B	8850	genome.wustl.edu	37	3	20193899	20193899	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003884.4	+1	reviewed	p.R794Q	1.000	145	0%	244	41.8%	9	55.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1
RBMS3	27303	genome.wustl.edu	37	3	29938905	29938905	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001003793.2	+1	reviewed	p.R276H	1.000	328	0%	344	42.2%	2	100%	probably_damaging(1)	tolerated(0.21)	deleterious(0.544)	NULL
TRIM71	131405	genome.wustl.edu	37	3	32932570	32932570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039111.1	+1	provisional	p.R625H	1.000	40	0%	17	35.3%	0	-	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	HMMPfam_NHL,superfamily_SSF101898
GORASP1	64689	genome.wustl.edu	37	3	39142260	39142260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031899.2	-1	reviewed	p.A182T	1.000	44	0%	39	46.2%	27	25.9%	benign(0.003)	tolerated(0.6)	neutral(0.004)	superfamily_PDZ domain-like,HMMPfam_GRASP55_65
CTNNB1	1499	genome.wustl.edu	37	3	41268792	41268792	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098209.1	+1	reviewed	p.L344	0.989	116	0%	156	12.8%	112	1.7%	-	-	-	HMMSmart_SM00185,superfamily_ARM repeat
NKTR	4820	genome.wustl.edu	37	3	42680746	42680746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005385.3	+1	reviewed	p.E1184K	0.265	129	0%	105	41.9%	41	51.2%	unknown(0)	tolerated(0.16)	-	NULL
ZBTB47	92999	genome.wustl.edu	37	3	42705822	42705822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145166.3	+1	validated	p.P283L	1.000	35	0%	19	36.8%	15	53.3%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	superfamily_SSF57667
KBTBD5	131377	genome.wustl.edu	37	3	42727748	42727748	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152393.2	+1	validated	p.R213H	1.000	25	0%	14	42.9%	0	-	possibly_damaging(0.843)	deleterious(0.04)	deleterious(0.672)	HMMPfam_BACK
CCDC13	152206	genome.wustl.edu	37	3	42754747	42754747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144719.3	-1	validated	p.R594C	0.095	85	0%	45	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C3orf39	84892	genome.wustl.edu	37	3	43121788	43121788	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032806.4	-1	provisional	p.T379M	0.999	102	0%	30	16.7%	27	3.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF445	353274	genome.wustl.edu	37	3	44491048	44491048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181489.5	-1	validated	p.M296I	0.001	133	0%	96	41.7%	7	42.8%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
TMEM42	131616	genome.wustl.edu	37	3	44906624	44906624	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144638.1	+1	provisional	p.H144	1.000	214	0%	132	37.9%	9	11.1%	-	-	-	NULL
LTF	4057	genome.wustl.edu	37	3	46501253	46501253	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002343.2	-1	reviewed	p.E34K	0.316	190	0%	121	33.1%	26	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850
ALS2CL	259173	genome.wustl.edu	37	3	46717820	46717820	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_147129.2	-1	validated	p.A701T	0.001	74	1.4%	45	46.7%	1	0%	benign(0.022)	tolerated(0.19)	neutral(0.051)	superfamily_VPS9 domain (Pfam 02204)
ALS2CL	259173	genome.wustl.edu	37	3	46718473	46718473	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_147129.2	-1	validated	p.W599*	1.000	49	0%	23	39.1%	1	100%	-	-	-	NULL
PRSS50	29122	genome.wustl.edu	37	3	46759022	46759022	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013270.4	-1	validated	p.R71H	0.000	177	0%	104	42.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SETD2	29072	genome.wustl.edu	37	3	47127764	47127764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014159.6	-1	reviewed	p.R1773H	1.000	151	0.7%	181	48.1%	12	41.6%	benign(0.169)	tolerated(0.05)	neutral(0.361)	NULL
SCAP	22937	genome.wustl.edu	37	3	47455809	47455809	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012235.2	-1	reviewed	p.R1152Q	1.000	92	0%	43	14%	101	22.7%	possibly_damaging(0.949)	tolerated(0.34)	neutral(0.416)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
PFKFB4	5210	genome.wustl.edu	37	3	48560975	48560975	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004567.2	-1	provisional	p.A427V	1.000	112	0%	72	44.4%	15	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF53254
COL7A1	1294	genome.wustl.edu	37	3	48602350	48602350	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000094.3	-1	reviewed	p.R2895Q	0.973	86	0%	45	42.2%	15	33.3%	unknown(0)	deleterious(0.01)	-	HMMPfam_Kunitz_BPTI,superfamily_BPTI-like
COL7A1	1294	genome.wustl.edu	37	3	48612947	48612947	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000094.3	-1	reviewed	p.R2002H	0.913	24	0%	17	29.4%	3	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Collagen
CELSR3	1951	genome.wustl.edu	37	3	48696363	48696363	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001407.2	-1	reviewed	p.D1235	1.000	80	0%	46	37%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
NCKIPSD	51517	genome.wustl.edu	37	3	48712084	48712084	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016453.2	-1	reviewed	p.R688*	1.000	224	0%	123	48.8%	33	57.5%	-	-	-	NULL
ARIH2	10425	genome.wustl.edu	37	3	49011156	49011156	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006321.2	+1	provisional	p.H265	1.000	118	0%	171	45.6%	37	32.4%	-	-	-	HMMPfam_IBR,HMMSmart_SM00647
DAG1	1605	genome.wustl.edu	37	3	49570345	49570345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004393.4	+1	reviewed	p.A801T	1.000	35	0%	26	19.2%	71	22.5%	possibly_damaging(0.792)	tolerated(0.1)	deleterious(0.583)	HMMPfam_DAG1
BSN	8927	genome.wustl.edu	37	3	49689307	49689307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003458.3	+1	reviewed	p.S773F	1.000	40	0%	32	46.9%	0	-	probably_damaging(0.999)	-	-	NULL
AMIGO3	386724	genome.wustl.edu	37	3	49756366	49756366	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198722.2	-1	validated	p.H178R	1.000	28	0%	15	46.7%	8	25%	benign(0.009)	tolerated(0.76)	neutral(0.002)	superfamily_SSF52058
TRAIP	10293	genome.wustl.edu	37	3	49879919	49879919	+	Missense_Mutation	SNP	C	C	T	rs143366962	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005879.2	-1	reviewed	p.R157H	0.992	276	0%	202	11.9%	7	0%	benign(0.007)	tolerated(0.09)	neutral(0.296)	superfamily_Prefoldin
MST1R	4486	genome.wustl.edu	37	3	49936519	49936519	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002447.2	-1	validated	p.R470C	1.000	135	0%	48	47.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
RBM6	10180	genome.wustl.edu	37	3	50091792	50091792	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005777.2	+1	validated	p.R553*	0.785	243	0%	265	45.7%	26	38.4%	-	-	-	NULL
CACNA2D2	9254	genome.wustl.edu	37	3	50405581	50405581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001005505.1	-1	reviewed	p.D711N	1.000	126	0%	121	38%	1	0%	benign(0.01)	tolerated(0.7)	neutral(0.003)	NULL
DOCK3	1795	genome.wustl.edu	37	3	51198039	51198039	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004947.3	+1	validated	p.R315*	1.000	93	0%	105	36.2%	0	-	-	-	-	NULL
VPRBP	9730	genome.wustl.edu	37	3	51464927	51464927	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014703.2	-1	validated	p.A528	0.001	64	0%	99	39.4%	1	100%	-	-	-	superfamily_ARM repeat
RAD54L2	23132	genome.wustl.edu	37	3	51671198	51671198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015106.2	+1	validated	p.R454H	1.000	65	0%	60	46.7%	2	50%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD54L2	23132	genome.wustl.edu	37	3	51673506	51673506	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000432863	+1	known	p.R473C	0.953	125	0%	101	38.6%	1	0%	-	-	-	NULL
GRM2	2912	genome.wustl.edu	37	3	51749289	51749289	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000839.3	+1	reviewed	p.C500	1.000	62	0%	28	46.4%	0	-	-	-	-	HMMPfam_NCD3G,superfamily_Periplasmic binding protein-like I
IQCF2	389123	genome.wustl.edu	37	3	51897096	51897096	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203424.1	+1	validated	p.R69G	0.158	90	0%	32	40.6%	0	-	benign(0.192)	tolerated(0.22)	neutral(0.060)	HMMSmart_IQ,superfamily_SSF52540
RRP9	9136	genome.wustl.edu	37	3	51969223	51969223	+	Missense_Mutation	SNP	C	C	T	rs144222078	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004704.3	-1	provisional	p.A342T	0.983	39	0%	42	45.2%	36	38.8%	benign(0.013)	tolerated(0.12)	neutral(0.261)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
NISCH	11188	genome.wustl.edu	37	3	52505888	52505888	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007184.3	+1	validated	p.A156	0.404	30	0%	28	53.6%	13	38.4%	-	-	-	NULL
NT5DC2	64943	genome.wustl.edu	37	3	52563227	52563227	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000498608	-1	known	p.Q63*	0.998	312	0%	166	23.5%	44	25%	benign(0.045)	tolerated(0.15)	neutral(0.243)	NULL
DNAH12	201625	genome.wustl.edu	37	3	57431106	57431106	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178504.4	-1	validated	p.A1384V	1.000	66	0%	98	16.3%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
FLNB	2317	genome.wustl.edu	37	3	58084617	58084617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001457.3	+1	reviewed	p.V443I	0.000	138	0%	95	42.1%	8	12.5%	benign(0)	tolerated(0.19)	neutral(0.050)	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
ABHD6	57406	genome.wustl.edu	37	3	58256757	58256757	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020676.5	+1	validated	p.S163	0.000	179	0%	127	33.1%	1	0%	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
PTPRG	5793	genome.wustl.edu	37	3	62248538	62248538	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002841.3	+1	reviewed	p.K875	1.000	195	0%	250	16.8%	8	25%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
ADAMTS9	56999	genome.wustl.edu	37	3	64527528	64527528	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182920.1	-1	reviewed	p.R1728L	0.894	322	0%	359	40.7%	15	53.3%	benign(0.161)	tolerated(0.3)	neutral(0.043)	HMMPfam_TSP_1,HMMSmart_SM00209
MAGI1	9223	genome.wustl.edu	37	3	65464317	65464317	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001033057.1	-1	reviewed	p.A236V	0.825	158	0%	158	46.8%	5	60%	benign(0.025)	deleterious(0.02)	neutral(0.384)	HMMSmart_SM00072
LRIG1	26018	genome.wustl.edu	37	3	66436501	66436501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015541.2	-1	validated	p.R565C	1.000	148	0%	80	42.5%	403	49.6%	probably_damaging(0.998)	tolerated(0.18)	deleterious(0.530)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
ROBO1	6091	genome.wustl.edu	37	3	78655919	78655919	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002941.3	-1	reviewed	p.R1570*	1.000	405	0%	398	36.2%	7	57.1%	-	-	-	NULL
ROBO1	6091	genome.wustl.edu	37	3	78795967	78795967	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002941.3	-1	reviewed	p.R195*	0.798	124	0%	117	42.7%	1	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
CLDND1	56650	genome.wustl.edu	37	3	98235916	98235916	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001040182.1	-1	validated	p.G197D	1.000	160	0.6%	176	10.2%	33	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PMP22_Claudin
GPR15	2838	genome.wustl.edu	37	3	98251268	98251268	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005290.1	+1	provisional	p.R131C	1.000	85	0%	59	28.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
DCBLD2	131566	genome.wustl.edu	37	3	98600507	98600507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080927.3	-1	validated	p.R104C	1.000	138	0%	185	49.2%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
LNP1	348801	genome.wustl.edu	37	3	100170795	100170795	+	Splice_Site	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001085451.1	+1	validated	e2+2	1.000	84	0%	120	20.8%	0	-	-	-	-	-
ABI3BP	25890	genome.wustl.edu	37	3	100566512	100566512	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015429.3	-1	validated	p.T486A	0.999	431	0%	816	12.6%	0	-	possibly_damaging(0.63)	deleterious(0)	deleterious(0.664)	NULL
PVRL3	25945	genome.wustl.edu	37	3	110830909	110830909	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015480.1	+1	provisional	p.H65Y	0.995	31	0%	32	31.2%	0	-	benign(0)	deleterious(0.04)	neutral(0.349)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
C3orf17	25871	genome.wustl.edu	37	3	112727168	112727168	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015412.3	-1	validated	p.R362Q	0.954	169	0%	257	11.3%	15	6.6%	probably_damaging(1)	tolerated(0.26)	deleterious(0.534)	NULL
WDR52	55779	genome.wustl.edu	37	3	113082086	113082086	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018338.3	-1	validated	p.R947Q	0.000	167	0%	372	40.3%	5	20%	benign(0.006)	tolerated(0.58)	neutral(0.005)	NULL
POGLUT1	56983	genome.wustl.edu	37	3	119205693	119205693	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152305.2	+1	validated	p.R218*	1.000	139	0%	160	39.4%	3	0%	-	-	-	HMMSmart_SM00672,HMMPfam_DUF821
NR1I2	8856	genome.wustl.edu	37	3	119530522	119530522	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022002.2	+1	reviewed	p.D195	0.004	142	0%	101	46.5%	0	-	-	-	-	superfamily_Str_ncl_receptor
SLC15A2	6565	genome.wustl.edu	37	3	121643217	121643217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021082.3	+1	validated	p.P341Q	1.000	299	0%	356	30.9%	36	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PTR2,superfamily_MFS_gen_substrate_transporter
KALRN	8997	genome.wustl.edu	37	3	124132413	124132413	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001024660.3	+1	reviewed	p.R813C	1.000	107	0%	37	18.9%	3	33.3%	possibly_damaging(0.911)	tolerated(0.17)	neutral(0.422)	NULL
PLXNA1	5361	genome.wustl.edu	37	3	126710338	126710338	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032242.3	+1	validated	p.A413T	0.998	20	0%	12	58.3%	2	0%	benign(0.406)	deleterious(0)	deleterious(0.575)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
PODXL2	50512	genome.wustl.edu	37	3	127379259	127379259	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015720.2	+1	validated	p.I130V	0.000	112	0%	123	38.2%	17	35.2%	unknown(0)	tolerated(0.56)	-	NULL
COPG1	22820	genome.wustl.edu	37	3	128984505	128984505	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016128.3	+1	validated	p.C446	0.367	105	0%	58	48.3%	161	47.2%	-	-	-	HMMPfam_Adaptin_N,superfamily_ARM repeat
NPHP3	27031	genome.wustl.edu	37	3	132407950	132407950	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153240.3	-1	reviewed	p.R951*	1.000	98	0%	90	32.2%	4	25%	-	-	-	HMMSmart_SM00028,superfamily_TPR-like
TOPBP1	11073	genome.wustl.edu	37	3	133363195	133363195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007027.3	-1	reviewed	p.T506M	0.000	43	0%	60	48.3%	5	40%	benign(0.004)	tolerated(0.23)	neutral(0.042)	NULL
RAB6B	51560	genome.wustl.edu	37	3	133560458	133560458	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016577.3	-1	validated	p.R60H	1.000	175	0%	130	34.6%	2	50%	possibly_damaging(0.875)	deleterious(0.01)	deleterious(0.746)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
PCCB	5096	genome.wustl.edu	37	3	135975424	135975424	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000532.4	+1	reviewed	p.R111*	1.000	248	0%	447	43.6%	17	5.8%	-	-	-	HMMPfam_Carboxyl_trans,superfamily_SSF52096
ZBTB38	253461	genome.wustl.edu	37	3	141161551	141161551	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080412.2	+1	validated	p.L107	0.087	73	0%	96	39.6%	8	50%	-	-	-	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
TFDP2	7029	genome.wustl.edu	37	3	141671839	141671839	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006286.4	-1	reviewed	p.S297	0.032	133	0%	160	31.2%	24	33.3%	-	-	-	HMMPfam_DP
GK5	256356	genome.wustl.edu	37	3	141889263	141889263	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039547.2	-1	validated	p.Q449E	1.000	108	0%	107	15%	5	20%	possibly_damaging(0.719)	tolerated(0.06)	deleterious(0.583)	HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain
ATR	545	genome.wustl.edu	37	3	142204114	142204114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001184.3	-1	reviewed	p.A2030V	0.001	180	0%	197	38.1%	7	57.1%	benign(0)	tolerated(0.27)	neutral(0.034)	HMMPfam_FAT,superfamily_ARM repeat
FAM194A	131831	genome.wustl.edu	37	3	150421333	150421333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152394.3	-1	validated	p.S118N	0.000	81	0%	48	29.2%	3	0%	possibly_damaging(0.767)	tolerated(0.32)	neutral(0.308)	NULL
AADAC	13	genome.wustl.edu	37	3	151535364	151535364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001086.2	+1	reviewed	p.V117M	0.000	254	0.4%	208	38%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	HMMPfam_Abhydrolase_3,superfamily_alpha/beta-Hydrolases
MBNL1	4154	genome.wustl.edu	37	3	152164521	152164521	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207293.1	+1	validated	p.R279Q	1.000	168	0.6%	174	48.3%	7	57.1%	possibly_damaging(0.928)	tolerated(0.53)	neutral(0.383)	NULL
PLCH1	23007	genome.wustl.edu	37	3	155203410	155203410	+	Silent	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130960.1	-1	validated	p.R911	0.748	181	0%	160	45.6%	3	66.6%	-	-	-	NULL
PLCH1	23007	genome.wustl.edu	37	3	155314063	155314063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130960.1	-1	validated	p.R50C	1.000	129	0%	145	51%	0	-	benign(0.007)	tolerated(0.44)	neutral(0.013)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
KCNAB1	7881	genome.wustl.edu	37	3	155861000	155861000	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003471.3	+1	reviewed	p.I11	1.000	104	0%	104	41.3%	0	-	-	-	-	NULL
IFT80	57560	genome.wustl.edu	37	3	160025521	160025521	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020800.1	-1	validated	p.R336G	0.998	134	0%	170	34.1%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Cyt_cd1_haem_C
SLITRK3	22865	genome.wustl.edu	37	3	164906984	164906984	+	Silent	SNP	A	A	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014926.2	-1	validated	p.A545	0.916	77	0%	54	40.7%	0	-	-	-	-	superfamily_SSF52058
SLITRK3	22865	genome.wustl.edu	37	3	164908117	164908117	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014926.2	-1	validated	p.A168T	1.000	75	0%	110	48.2%	0	-	possibly_damaging(0.86)	deleterious(0.03)	deleterious(0.697)	superfamily_SSF52058
MECOM	2122	genome.wustl.edu	37	3	168818709	168818709	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000494292	-1	known	p.R929Q	1.000	150	0%	209	11%	62	22.5%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
PHC3	80012	genome.wustl.edu	37	3	169820380	169820380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024947.3	-1	validated	p.R907Q	0.953	82	0%	67	31.3%	9	44.4%	probably_damaging(0.994)	tolerated(0.58)	neutral(0.457)	NULL
TBL1XR1	79718	genome.wustl.edu	37	3	176767841	176767841	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024665.4	-1	reviewed	p.R216*	1.000	208	0.5%	226	44.7%	6	0%	-	-	-	HMMSmart_WD40
PIK3CA	5290	genome.wustl.edu	37	3	178916876	178916876	+	Missense_Mutation	SNP	G	G	A	rs121913287		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006218.2	+1	reviewed	p.R88Q	1.000	83	0%	137	40.1%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B
PIK3CA	5290	genome.wustl.edu	37	3	178936083	178936083	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006218.2	+1	reviewed	p.E542V	1.000	103	0%	205	49.8%	5	20%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold
KCNMB3	27094	genome.wustl.edu	37	3	178984447	178984447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_171828.1	-1	reviewed	p.R18C	0.997	78	0%	38	21.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AP2M1	1173	genome.wustl.edu	37	3	183897998	183897998	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004068.3	+1	reviewed	p.A128T	0.999	82	0%	61	27.9%	313	49.5%	benign(0)	tolerated(0.6)	neutral(0.004)	superfamily_SNARE-like
CHRD	8646	genome.wustl.edu	37	3	184105204	184105204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003741.2	+1	reviewed	p.T797M	1.000	55	0%	23	39.1%	4	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_VWC,HMMSmart_SM00214
EPHB3	2049	genome.wustl.edu	37	3	184290765	184290765	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004443.3	+1	reviewed	p.F219	0.974	43	0%	31	35.5%	2	0%	-	-	-	NULL
EPHB3	2049	genome.wustl.edu	37	3	184295580	184295580	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004443.3	+1	reviewed	p.A538	0.136	80	0%	26	46.2%	2	100%	-	-	-	superfamily_FN_III-like
EPHB3	2049	genome.wustl.edu	37	3	184298262	184298262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004443.3	+1	reviewed	p.L749M	1.000	137	0%	75	40%	7	28.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
TRA2B	6434	genome.wustl.edu	37	3	185635510	185635510	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004593.2	-1	validated	p.R287H	1.000	135	0%	220	39.1%	160	46.2%	unknown(0)	deleterious(0)	-	NULL
AHSG	197	genome.wustl.edu	37	3	186338558	186338558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001622.2	+1	reviewed	p.D315N	0.945	61	0%	30	50%	0	-	possibly_damaging(0.939)	tolerated(0.34)	neutral(0.408)	NULL
TP63	8626	genome.wustl.edu	37	3	189526258	189526258	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003722.4	+1	reviewed	p.P174	0.701	203	0%	96	53.1%	3	0%	-	-	-	superfamily_p53-like transcription factors,HMMPfam_P53
CLDN1	9076	genome.wustl.edu	37	3	190026071	190026071	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021101.4	-1	validated	p.V211M	1.000	402	0.5%	532	39.7%	7	14.2%	unknown(0)	deleterious(0)	-	NULL
LOC647309	647309	genome.wustl.edu	37	3	190573184	190573184	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002342387.1	-1	model	p.H62R	1.000	114	0%	97	28.9%	2	50%	probably_damaging(0.978)	tolerated(0.12)	deleterious(0.681)	NULL
MUC4	4585	genome.wustl.edu	37	3	195508188	195508188	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018406.5	-1	reviewed	p.H3293	0.000	225	0%	166	25.3%	4	0%	-	-	-	NULL
TNK2	10188	genome.wustl.edu	37	3	195605956	195605956	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000438207	-1	known	p.T251M	0.976	75	0%	43	32.6%	15	20%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TM4SF19	116211	genome.wustl.edu	37	3	196053826	196053826	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138461.2	-1	validated	p.S93	0.000	66	0%	40	45%	0	-	-	-	-	HMMPfam_L6_membrane
KIAA0226	9711	genome.wustl.edu	37	3	197431563	197431563	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145642.2	-1	validated	p.V45M	0.988	67	0%	30	26.7%	4	25%	benign(0.03)	tolerated(0.2)	neutral(0.051)	NULL
PDE6B	5158	genome.wustl.edu	37	4	649789	649789	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000283.3	+1	reviewed	p.S351	1.000	116	0%	49	36.7%	0	-	-	-	-	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
MYL5	4636	genome.wustl.edu	37	4	672842	672842	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000513662	+1	known	p.T69	0.000	56	0%	43	44.2%	3	66.6%	-	-	-	NULL
GAK	2580	genome.wustl.edu	37	4	882752	882752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005255.2	-1	validated	p.A363V	0.447	44	0%	23	39.1%	14	28.5%	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
IDUA	3425	genome.wustl.edu	37	4	998057	998057	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000203.3	+1	reviewed	p.A613V	0.000	53	0%	36	11.1%	62	3.2%	benign(0)	tolerated(0.33)	neutral(0.024)	NULL
KIAA1530	57654	genome.wustl.edu	37	4	1360177	1360177	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020894.2	+1	validated	p.G416W	1.000	141	0%	76	44.7%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MFSD10	10227	genome.wustl.edu	37	4	2934097	2934097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001120.4	-1	reviewed	p.T225M	1.000	35	0%	10	70%	144	38.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
OTOP1	133060	genome.wustl.edu	37	4	4199619	4199619	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_177998.1	-1	provisional	p.G314	0.960	83	0%	40	32.5%	0	-	-	-	-	HMMPfam_DUF270
PPP2R2C	5522	genome.wustl.edu	37	4	6380162	6380162	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020416.3	-1	reviewed	p.N102	0.987	169	0%	82	30.5%	11	36.3%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_PP2A_B_N
TADA2B	93624	genome.wustl.edu	37	4	7055935	7055935	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152293.2	+1	validated	p.S139	0.992	30	0%	17	29.4%	13	46.1%	-	-	-	NULL
SH3TC1	54436	genome.wustl.edu	37	4	8233724	8233724	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018986.3	+1	validated	p.R991Q	0.000	47	0%	16	31.2%	8	12.5%	benign(0.272)	tolerated(0.47)	neutral(0.040)	NULL
FAM184B	27146	genome.wustl.edu	37	4	17710912	17710912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015688.1	-1	validated	p.T166M	0.000	31	0%	14	50%	0	-	possibly_damaging(0.861)	deleterious(0.02)	deleterious(0.716)	NULL
STIM2	57620	genome.wustl.edu	37	4	27019384	27019384	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020860.3	+1	reviewed	p.R601H	1.000	152	0%	90	36.7%	43	39.5%	probably_damaging(0.999)	tolerated(0.21)	deleterious(0.534)	NULL
KLF3	51274	genome.wustl.edu	37	4	38690342	38690342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016531.5	+1	validated	p.T65M	0.999	63	0%	39	48.7%	30	40%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
TLR10	81793	genome.wustl.edu	37	4	38776976	38776976	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001017388.1	-1	reviewed	p.L79P	0.827	106	0%	163	46%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_SSF52058
WDR19	57728	genome.wustl.edu	37	4	39187361	39187361	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025132.3	+1	reviewed	p.L8	0.005	139	0%	204	36.3%	3	33.3%	-	-	-	HMMSmart_SM00320
CHRNA9	55584	genome.wustl.edu	37	4	40356292	40356292	+	Missense_Mutation	SNP	C	C	T	rs55962300	byCluster;byFrequency	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017581.2	+1	reviewed	p.R399C	0.026	99	0%	84	40.5%	0	-	benign(0.003)	tolerated(0.19)	neutral(0.050)	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
UCHL1	7345	genome.wustl.edu	37	4	41263939	41263939	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004181.4	+1	reviewed	p.R153Q	1.000	142	0%	158	28.5%	5	60%	probably_damaging(0.998)	tolerated(0.27)	deleterious(0.508)	HMMPfam_Peptidase_C12,superfamily_SSF54001
LIMCH1	22998	genome.wustl.edu	37	4	41682098	41682098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014988.2	+1	validated	p.R815C	1.000	157	0%	184	38%	8	37.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SLAIN2	57606	genome.wustl.edu	37	4	48422195	48422195	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020846.1	+1	validated	p.R472W	1.000	198	0%	162	42%	29	34.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LPHN3	23284	genome.wustl.edu	37	4	62758502	62758502	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015236.4	+1	reviewed	p.T469A	1.000	141	0%	104	25%	7	0%	benign(0)	tolerated(0.22)	neutral(0.042)	NULL
TECRL	253017	genome.wustl.edu	37	4	65275041	65275041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001010874.4	-1	validated	p.S10L	0.999	136	0%	168	33.9%	0	-	benign(0.071)	deleterious(0)	neutral(0.450)	NULL
UGT2A1	10941	genome.wustl.edu	37	4	70505247	70505247	+	Splice_Site	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000457664	-1	known	e2-1	1.000	111	0%	111	34.2%	0	-	-	-	-	-
FRAS1	80144	genome.wustl.edu	37	4	79436967	79436967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025074.6	+1	reviewed	p.D3396N	1.000	224	0%	125	37.6%	5	40%	benign(0.001)	tolerated(0.37)	neutral(0.019)	NULL
BMP2K	55589	genome.wustl.edu	37	4	79832642	79832642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198892.1	+1	reviewed	p.R981C	1.000	56	0%	49	49%	3	66.6%	unknown(0)	deleterious(0)	-	NULL
FGF5	2250	genome.wustl.edu	37	4	81188108	81188108	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004464.3	+1	reviewed	p.S44P	0.088	39	0%	19	36.8%	0	-	unknown(0)	deleterious(0)	-	NULL
LIN54	132660	genome.wustl.edu	37	4	83859581	83859581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_194282.2	-1	validated	p.R506Q	1.000	151	0%	234	38%	8	37.5%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
WDFY3	23001	genome.wustl.edu	37	4	85605097	85605097	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014991.4	-1	reviewed	p.R3242Q	1.000	89	0%	88	48.9%	17	64.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDFY3	23001	genome.wustl.edu	37	4	85654761	85654761	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014991.4	-1	reviewed	p.R2332H	1.000	73	0%	54	38.9%	7	42.8%	benign(0.034)	tolerated(0.41)	neutral(0.017)	NULL
MAPK10	5602	genome.wustl.edu	37	4	86989090	86989090	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138982.2	-1	reviewed	p.K274R	1.000	198	0%	241	34.4%	1	0%	benign(0.374)	tolerated(0.36)	neutral(0.139)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
HSD17B13	345275	genome.wustl.edu	37	4	88235097	88235097	+	Silent	SNP	G	G	A	rs143404524	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178135.3	-1	validated	p.A191	1.000	212	0%	257	44.4%	0	-	-	-	-	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
GRID2	2895	genome.wustl.edu	37	4	94547529	94547529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001510.2	+1	validated	p.R768Q	1.000	250	0%	491	28.1%	0	-	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
UNC5C	8633	genome.wustl.edu	37	4	96124015	96124015	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003728.2	-1	reviewed	p.A668V	1.000	188	0.5%	91	25.3%	3	0%	benign(0.273)	tolerated(0.3)	neutral(0.058)	NULL
UNC5C	8633	genome.wustl.edu	37	4	96140196	96140196	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003728.2	-1	reviewed	p.A523	0.029	138	0%	117	35%	4	100%	-	-	-	NULL
RAP1GDS1	5910	genome.wustl.edu	37	4	99363197	99363197	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001100426.1	+1	validated	p.R586C	1.000	86	0%	115	49.6%	31	45.1%	probably_damaging(0.978)	tolerated(0.07)	deleterious(0.740)	superfamily_ARM repeat
MTTP	4547	genome.wustl.edu	37	4	100503173	100503173	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000253.2	+1	reviewed	p.R58H	0.925	117	0%	132	43.2%	0	-	possibly_damaging(0.944)	deleterious(0.02)	deleterious(0.772)	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_Lipid_transp_b-sht_shell
SLC9B2	133308	genome.wustl.edu	37	4	103947590	103947590	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000503103	-1	known	p.A415T	0.970	189	0%	204	44.6%	1	0%	unknown(0)	-	-	NULL
SLC9B2	133308	genome.wustl.edu	37	4	103966100	103966100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178833.4	-1	validated	p.A315T	0.973	209	0%	267	43.8%	0	-	benign(0.005)	tolerated(0.1)	neutral(0.286)	HMMPfam_Na_H_Exchanger
TET2	54790	genome.wustl.edu	37	4	106156729	106156729	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001127208.1	+1	validated	p.R544*	0.000	70	0%	74	43.2%	2	0%	-	-	-	NULL
NPNT	255743	genome.wustl.edu	37	4	106859498	106859498	+	Silent	SNP	T	T	C	rs79192003		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000514837	+1	known	p.*119R	0.999	111	0%	75	42.7%	19	42.1%	-	-	-	HMMSmart_SM00181,superfamily_Growth factor receptor domain
PITX2	5308	genome.wustl.edu	37	4	111539443	111539443	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000325.5	-1	reviewed	p.Y271	0.925	80	0%	49	20.4%	2	0%	-	-	-	NULL
ALPK1	80216	genome.wustl.edu	37	4	113353047	113353047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001102406.1	+1	validated	p.P782S	0.000	31	0%	21	57.1%	5	20%	benign(0)	tolerated(0.73)	neutral(0.002)	NULL
LARP7	51574	genome.wustl.edu	37	4	113568387	113568387	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015454.1	+1	validated	p.R227*	0.030	157	0%	239	33.1%	13	23%	-	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114277096	114277096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001148.4	+1	reviewed	p.P2441H	1.000	77	0%	86	33.7%	0	-	probably_damaging(1)	-	-	NULL
NDST3	9348	genome.wustl.edu	37	4	119064745	119064745	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004784.2	+1	reviewed	p.H482R	1.000	97	0%	184	35.3%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
EXOSC9	5393	genome.wustl.edu	37	4	122731151	122731151	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001034194.1	+1	validated	p.R212Q	1.000	155	0%	195	36.4%	48	45.8%	possibly_damaging(0.591)	tolerated(0.37)	neutral(0.223)	HMMPfam_RNase_PH_C,superfamily_3_ExoRNase
TRPC3	7222	genome.wustl.edu	37	4	122853893	122853893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130698.1	-1	validated	p.R174C	1.000	41	0%	17	58.8%	0	-	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	HMMSmart_ANK,superfamily_ANK
KIAA1109	84162	genome.wustl.edu	37	4	123192397	123192397	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015312.3	+1	reviewed	p.R2573H	1.000	109	0%	98	38.8%	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123236649	123236649	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015312.3	+1	reviewed	p.V3449I	1.000	153	0%	183	11.5%	8	0%	benign(0.095)	tolerated(0.21)	neutral(0.051)	NULL
SETD7	80854	genome.wustl.edu	37	4	140432959	140432959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030648.2	-1	validated	p.R320H	1.000	48	0%	34	47.1%	2	100%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
MAML3	55534	genome.wustl.edu	37	4	140811420	140811420	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018717.4	-1	validated	p.T390	0.583	172	0%	128	36.7%	1	0%	-	-	-	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561226	147561226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004575.2	+1	validated	p.A166T	0.998	138	0%	77	42.9%	0	-	benign(0.002)	tolerated(0.09)	neutral(0.296)	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561860	147561860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004575.2	+1	validated	p.A377V	1.000	45	0%	31	29%	0	-	possibly_damaging(0.804)	deleterious(0.02)	deleterious(0.685)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
ARHGAP10	79658	genome.wustl.edu	37	4	148867828	148867828	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024605.3	+1	validated	p.I455T	1.000	205	0%	267	18%	1	0%	benign(0.297)	deleterious(0)	deleterious(0.536)	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
FBXW7	55294	genome.wustl.edu	37	4	153332916	153332916	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033632.2	-1	reviewed	p.R14*	1.000	161	0.6%	124	46%	3	66.6%	-	-	-	NULL
GLRA3	8001	genome.wustl.edu	37	4	175598272	175598272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006529.2	-1	validated	p.T295M	1.000	130	0%	95	44.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
WWC2	80014	genome.wustl.edu	37	4	184190138	184190138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024949.5	+1	validated	p.A741V	0.996	204	0%	191	30.4%	5	80%	benign(0.024)	tolerated(0.24)	neutral(0.038)	HMMPfam_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
MTNR1A	4543	genome.wustl.edu	37	4	187455422	187455422	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005958.3	-1	reviewed	p.A158	0.000	130	0%	59	42.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FAT1	2195	genome.wustl.edu	37	4	187541997	187541997	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005245.3	-1	reviewed	p.I1915F	0.083	151	0%	161	41.6%	9	77.7%	benign(0)	tolerated(0.72)	neutral(0.002)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187630461	187630461	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005245.3	-1	reviewed	p.T174M	1.000	213	0%	215	38.6%	3	66.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
TRIML1	339976	genome.wustl.edu	37	4	189063617	189063617	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178556.3	+1	provisional	p.S239L	0.000	100	0%	84	35.7%	0	-	benign(0.001)	tolerated(0.28)	neutral(0.032)	NULL
CCDC127	133957	genome.wustl.edu	37	5	205859	205859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145265.2	-1	provisional	p.K112N	0.997	177	0%	215	38.1%	16	50%	possibly_damaging(0.844)	deleterious(0.02)	deleterious(0.707)	NULL
EXOC3	11336	genome.wustl.edu	37	5	446345	446345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007277.4	+1	reviewed	p.V9I	0.997	79	0%	61	39.3%	8	37.5%	possibly_damaging(0.882)	tolerated(0.08)	deleterious(0.644)	NULL
BRD9	65980	genome.wustl.edu	37	5	864601	864601	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_023924.4	-1	validated	p.A496	0.001	58	0%	67	40.3%	30	43.3%	-	-	-	NULL
SLC12A7	10723	genome.wustl.edu	37	5	1084051	1084051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006598.2	-1	validated	p.R313H	1.000	73	0%	17	47.1%	19	57.8%	probably_damaging(0.962)	tolerated(0.19)	neutral(0.455)	HMMPfam_AA_permease
C5orf38	153571	genome.wustl.edu	37	5	2752740	2752740	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178569.2	+1	provisional	p.V69M	0.002	39	0%	30	16.7%	1	0%	unknown(0)	-	-	NULL
IRX1	79192	genome.wustl.edu	37	5	3600266	3600266	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024337.3	+1	validated	p.H402Y	1.000	21	0%	14	28.6%	5	80%	benign(0.184)	tolerated(0.07)	neutral(0.336)	NULL
NSUN2	54888	genome.wustl.edu	37	5	6604732	6604732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017755.4	-1	validated	p.R602W	1.000	163	0%	188	39.4%	42	40.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PAPD7	11044	genome.wustl.edu	37	5	6750613	6750613	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006999.4	+1	reviewed	p.D369	1.000	80	0%	47	40.4%	22	45.4%	-	-	-	NULL
DNAH5	1767	genome.wustl.edu	37	5	13766225	13766225	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001369.2	-1	reviewed	p.R3321W	1.000	92	0%	88	37.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
DNAH5	1767	genome.wustl.edu	37	5	13829795	13829795	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001369.2	-1	reviewed	p.R2090W	0.885	109	0%	82	39%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_AAA,superfamily_SSF52540
CDH10	1008	genome.wustl.edu	37	5	24509706	24509706	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006727.2	-1	reviewed	p.R409G	0.972	184	0%	227	35.7%	0	-	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DROSHA	29102	genome.wustl.edu	37	5	31511260	31511260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000512076	-1	known	p.R143Q	0.990	155	0%	187	39.6%	13	61.5%	-	-	-	NULL
MIR579	693164	genome.wustl.edu	37	5	32394537	32394537	+	RNA	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000385221	-1	known	NULL	0.328	48	0%	61	34.4%	0	-	-	-	-	-
RXFP3	51289	genome.wustl.edu	37	5	33937425	33937425	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016568.3	+1	validated	p.R194*	1.000	66	0%	24	29.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
BRIX1	55299	genome.wustl.edu	37	5	34915850	34915850	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018321.3	+1	validated	p.A3T	0.960	74	0%	44	45.5%	18	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AGXT2	64902	genome.wustl.edu	37	5	35047909	35047909	+	Splice_Site	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031900.3	-1	reviewed	e1+1	0.982	89	0%	76	40.8%	0	-	-	-	-	-
NIPBL	25836	genome.wustl.edu	37	5	36976100	36976100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_133433.3	+1	reviewed	p.R364H	1.000	151	0%	206	44.7%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
NIPBL	25836	genome.wustl.edu	37	5	37052625	37052625	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_133433.3	+1	reviewed	p.R2407Q	1.000	142	0%	190	45.3%	26	53.8%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	superfamily_ARM repeat
NUP155	9631	genome.wustl.edu	37	5	37333695	37333695	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153485.1	-1	reviewed	p.A463V	1.000	125	0%	185	46.5%	2	0%	benign(0.29)	tolerated(0.08)	neutral(0.389)	HMMPfam_Nucleoporin
GDNF	2668	genome.wustl.edu	37	5	37815796	37815796	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000514.2	-1	reviewed	p.H198R	1.000	103	0%	85	29.4%	5	40%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_TGF_beta,HMMSmart_SM00204,superfamily_Cystine-knot cytokines
RICTOR	253260	genome.wustl.edu	37	5	39002712	39002712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152756.3	-1	validated	p.A106V	1.000	109	0%	172	36.6%	1	0%	benign(0.097)	tolerated(0.27)	neutral(0.041)	superfamily_ARM repeat
PTGER4	5734	genome.wustl.edu	37	5	40681327	40681327	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000958.2	+1	reviewed	p.A78T	1.000	42	0%	16	43.8%	4	25%	possibly_damaging(0.756)	tolerated(0.08)	deleterious(0.579)	HMMPfam_7tm_1,superfamily_SSF81321
GHR	2690	genome.wustl.edu	37	5	42719274	42719274	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000163.2	+1	reviewed	p.H555Q	0.000	152	0%	127	44.9%	0	-	benign(0.01)	tolerated(0.59)	neutral(0.005)	NULL
IL31RA	133396	genome.wustl.edu	37	5	55212787	55212787	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_139017.4	+1	validated	p.R712C	0.000	66	0%	88	30.7%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
ZSWIM6	57688	genome.wustl.edu	37	5	60821800	60821800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020928.1	+1	provisional	p.H563Y	1.000	111	0%	87	32.2%	8	25%	possibly_damaging(0.916)	tolerated(0.54)	neutral(0.374)	NULL
PPWD1	23398	genome.wustl.edu	37	5	64872779	64872779	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015342.2	+1	validated	p.R348H	1.000	182	0%	257	23.3%	19	26.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40_like
ENC1	8507	genome.wustl.edu	37	5	73931012	73931012	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003633.2	-1	validated	p.G433	0.035	32	0%	22	27.3%	12	41.6%	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
SV2C	22987	genome.wustl.edu	37	5	75505675	75505675	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014979.1	+1	provisional	p.Y292	0.993	98	0%	86	39.5%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
CRHBP	1393	genome.wustl.edu	37	5	76264611	76264611	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001882.3	+1	reviewed	p.H290	0.765	150	0%	177	36.2%	0	-	-	-	-	HMMPfam_CRF-BP
AGGF1	55109	genome.wustl.edu	37	5	76344787	76344787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018046.3	+1	validated	p.R447Q	0.997	108	0%	270	40%	16	37.5%	possibly_damaging(0.657)	tolerated(0.31)	neutral(0.259)	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain
CMYA5	202333	genome.wustl.edu	37	5	79058906	79058906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153610.3	+1	validated	p.R3810H	0.003	56	0%	33	57.6%	0	-	probably_damaging(0.998)	tolerated(0.8)	deleterious(0.475)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CMYA5	202333	genome.wustl.edu	37	5	79058953	79058953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153610.3	+1	validated	p.R3826W	1.000	59	0%	31	29%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
VCAN	1462	genome.wustl.edu	37	5	82836874	82836874	+	Silent	SNP	C	C	T	rs184452501	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004385.4	+1	reviewed	p.D2684	0.000	112	0%	116	34.5%	0	-	-	-	-	NULL
VCAN	1462	genome.wustl.edu	37	5	82876228	82876228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004385.4	+1	reviewed	p.R3389Q	1.000	124	0%	156	40.4%	8	0%	possibly_damaging(0.951)	deleterious(0.01)	deleterious(0.800)	NULL
GPR98	84059	genome.wustl.edu	37	5	90046431	90046431	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032119.3	+1	reviewed	p.R3680C	1.000	127	0%	234	35%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GPR98	84059	genome.wustl.edu	37	5	90073861	90073861	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032119.3	+1	reviewed	e62+1	1.000	86	0%	106	12.3%	0	-	-	-	-	-
ERAP1	51752	genome.wustl.edu	37	5	96139325	96139325	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016442.3	-1	validated	p.I102T	0.151	252	0%	208	34.1%	14	71.4%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	HMMPfam_Peptidase_M1,superfamily_SSF63737
PAM	5066	genome.wustl.edu	37	5	102237087	102237087	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000919.3	+1	reviewed	p.R80*	0.995	272	0%	372	40.3%	92	11.9%	-	-	-	HMMPfam_Cu2_monooxygen,superfamily_PHM_PNGase_F
DCP2	167227	genome.wustl.edu	37	5	112339653	112339653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152624.4	+1	validated	p.R274H	1.000	95	0%	132	37.9%	2	50%	benign(0.047)	deleterious(0.03)	neutral(0.367)	NULL
SNCAIP	9627	genome.wustl.edu	37	5	121786663	121786663	+	Silent	SNP	C	C	T	rs146249796	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005460.2	+1	reviewed	p.S707	0.013	59	0%	48	41.7%	9	55.5%	-	-	-	NULL
MEGF10	84466	genome.wustl.edu	37	5	126783312	126783312	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032446.2	+1	validated	p.H931R	1.000	106	0%	80	26.3%	0	-	benign(0.021)	deleterious(0.02)	neutral(0.384)	NULL
CTXN3	613212	genome.wustl.edu	37	5	126993361	126993361	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001048252.2	+1	validated	p.R50W	1.000	119	0%	116	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ISOC1	51015	genome.wustl.edu	37	5	128430716	128430716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016048.2	+1	validated	p.G86D	1.000	35	0%	18	38.9%	38	42.1%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ADAMTS19	171019	genome.wustl.edu	37	5	129037269	129037269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_133638.3	+1	reviewed	p.A1042V	0.996	51	0%	40	35%	0	-	probably_damaging(1)	tolerated(0.45)	deleterious(0.512)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
FNIP1	96459	genome.wustl.edu	37	5	131039917	131039917	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000513722	-1	known	p.A113V	0.959	59	0%	141	30.5%	1	0%	-	-	-	NULL
P4HA2	8974	genome.wustl.edu	37	5	131545991	131545991	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142599.1	-1	reviewed	p.R232H	1.000	99	0%	59	40.7%	79	54.4%	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	NULL
PDLIM4	8572	genome.wustl.edu	37	5	131607781	131607781	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001131027.1	+1	reviewed	p.A245V	1.000	74	0%	43	37.2%	7	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
CCNI2	645121	genome.wustl.edu	37	5	132086672	132086672	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039780.2	+1	provisional	p.L253	0.938	197	0%	196	15.3%	1	0%	-	-	-	NULL
PHF15	23338	genome.wustl.edu	37	5	133873756	133873756	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015288.4	+1	provisional	p.E46K	1.000	74	0%	55	36.4%	5	20%	possibly_damaging(0.598)	tolerated(0.29)	neutral(0.236)	HMMPfam_EPL1
TRPC7	57113	genome.wustl.edu	37	5	135651309	135651309	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000503275	-1	known	p.R313C	0.995	146	0%	146	34.9%	0	-	-	-	-	NULL
SPOCK1	6695	genome.wustl.edu	37	5	136324158	136324158	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004598.3	-1	reviewed	p.G294D	1.000	151	0%	120	11.7%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_SPARC_Ca_bdg,superfamily_SSF47473
CTNNA1	1495	genome.wustl.edu	37	5	138221974	138221974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001903.2	+1	validated	p.R379H	1.000	180	0%	261	44.1%	158	46.8%	probably_damaging(0.969)	deleterious(0)	deleterious(0.856)	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin
PCDHA7	56141	genome.wustl.edu	37	5	140215744	140215744	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018910.2	+1	reviewed	p.A592	0.556	112	0%	59	35.6%	3	66.6%	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHA9	9752	genome.wustl.edu	37	5	140230270	140230270	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031857.1	+1	reviewed	p.G730	0.586	38	0%	21	33.3%	0	-	-	-	-	NULL
PCDHB5	26167	genome.wustl.edu	37	5	140515306	140515306	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015669.2	+1	reviewed	p.G97E	0.738	50	0%	57	40.4%	0	-	possibly_damaging(0.671)	tolerated(0.13)	deleterious(0.490)	HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB16	57717	genome.wustl.edu	37	5	140563036	140563036	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020957.1	+1	reviewed	p.V301A	0.872	65	0%	54	11.1%	1	0%	benign(0.028)	deleterious(0)	neutral(0.446)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB10	56126	genome.wustl.edu	37	5	140572512	140572512	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018930.3	+1	reviewed	p.H129	0.774	167	0%	171	38.6%	1	0%	-	-	-	PatternScan_CADHERIN_1,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140590576	140590576	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018932.3	+1	reviewed	p.S699	0.667	58	0%	26	61.5%	0	-	-	-	-	NULL
PCDHB15	56121	genome.wustl.edu	37	5	140625619	140625619	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018935.2	+1	reviewed	p.R158Q	0.537	39	0%	54	11.1%	1	0%	benign(0.001)	tolerated(1)	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHGA1	56114	genome.wustl.edu	37	5	140712234	140712234	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018912.2	+1	reviewed	p.T661	0.000	91	0%	47	34%	1	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB2	56103	genome.wustl.edu	37	5	140739912	140739912	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018923.2	+1	reviewed	p.A70	0.009	75	0%	50	30%	0	-	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGB3	56102	genome.wustl.edu	37	5	140751311	140751311	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018924.2	+1	reviewed	p.P450	0.000	42	0%	31	32.3%	0	-	-	-	-	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGA8	9708	genome.wustl.edu	37	5	140774124	140774124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032088.1	+1	reviewed	p.A582T	0.975	68	0%	38	42.1%	0	-	possibly_damaging(0.757)	tolerated(0.09)	deleterious(0.576)	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGB6	56100	genome.wustl.edu	37	5	140789535	140789535	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018926.2	+1	reviewed	p.T589I	1.000	37	0%	11	45.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGA10	56106	genome.wustl.edu	37	5	140794537	140794537	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018913.2	+1	reviewed	p.D599Y	1.000	73	0%	37	35.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGC3	5098	genome.wustl.edu	37	5	140856667	140856667	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002588.2	+1	reviewed	p.G328	0.964	57	0%	24	29.2%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
ABLIM3	22885	genome.wustl.edu	37	5	148577927	148577927	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014945.2	+1	validated	p.R99	1.000	96	0%	47	44.7%	1	0%	-	-	-	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
ABLIM3	22885	genome.wustl.edu	37	5	148586680	148586680	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014945.2	+1	validated	p.T186	0.288	95	0%	34	35.3%	1	0%	-	-	-	HMMPfam_LIM,HMMSmart_SM00132,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
PCYOX1L	78991	genome.wustl.edu	37	5	148745526	148745526	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024028.3	+1	validated	p.H164	0.240	100	0%	69	42%	4	50%	-	-	-	HMMPfam_Prenylcys_lyase,superfamily_FAD/NAD(P)-binding domain
ARHGEF37	389337	genome.wustl.edu	37	5	148996252	148996252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001669.2	+1	validated	p.P194H	0.012	143	0%	92	13%	5	40%	benign(0.296)	tolerated(0.11)	neutral(0.363)	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
LOC100287940	100287940	genome.wustl.edu	37	5	149677926	149677926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002342566.1	+1	model	p.A259T	0.391	101	0%	39	28.2%	0	-	-	-	-	NULL
SYNPO	11346	genome.wustl.edu	37	5	150028955	150028955	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007286.5	+1	validated	p.R373H	1.000	20	0%	16	56.2%	6	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAT2	2196	genome.wustl.edu	37	5	150922048	150922048	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001447.2	-1	reviewed	p.H2880	0.997	153	0%	83	39.8%	19	89.4%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150923451	150923451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001447.2	-1	reviewed	p.R2413C	0.001	75	0%	55	36.4%	7	14.2%	probably_damaging(0.986)	deleterious(0.05)	deleterious(0.780)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150945591	150945591	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001447.2	-1	reviewed	p.A968T	0.020	56	0%	30	50%	4	100%	benign(0.065)	tolerated(0.75)	neutral(0.006)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
GALNT10	55568	genome.wustl.edu	37	5	153709262	153709262	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198321.3	+1	reviewed	p.A178T	1.000	125	0%	84	36.9%	11	36.3%	possibly_damaging(0.437)	tolerated(0.22)	neutral(0.184)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
THG1L	54974	genome.wustl.edu	37	5	157166390	157166390	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017872.3	+1	provisional	p.A266V	0.987	47	0%	75	26.7%	8	50%	benign(0)	tolerated(0.28)	neutral(0.032)	HMMPfam_Thg1
CLINT1	9685	genome.wustl.edu	37	5	157218790	157218790	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014666.2	-1	validated	p.M434T	1.000	109	0%	85	40%	37	40.5%	unknown(0)	deleterious(0.01)	-	NULL
ODZ2	57451	genome.wustl.edu	37	5	167655079	167655079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001122679.1	+1	inferred	p.R1813C	1.000	80	0%	51	13.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Concanavalin A-like lectins/glucanases
ODZ2	57451	genome.wustl.edu	37	5	167671562	167671562	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001122679.1	+1	inferred	p.S1877	0.988	65	0%	38	60.5%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
WWC1	23286	genome.wustl.edu	37	5	167851015	167851015	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015238.2	+1	reviewed	p.S584	0.004	50	0%	31	35.5%	15	46.6%	-	-	-	NULL
SLIT3	6586	genome.wustl.edu	37	5	168093539	168093539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003062.2	-1	validated	p.V1498I	1.000	65	0%	25	40%	4	0%	benign(0.122)	tolerated(0.24)	neutral(0.048)	HMMSmart_SM00041,PatternScan_CTCK_1
HRH2	3274	genome.wustl.edu	37	5	175110610	175110610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001131055.1	+1	reviewed	p.R125Q	1.000	147	0%	91	35.2%	0	-	possibly_damaging(0.76)	tolerated(0.08)	deleterious(0.581)	HMMPfam_7tm_1,superfamily_SSF81321
ARL10	285598	genome.wustl.edu	37	5	175795965	175795965	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173664.4	+1	validated	p.V181I	0.995	82	0%	62	38.7%	0	-	unknown(0)	-	-	HMMPfam_Arf,superfamily_SSF52540
FGFR4	2264	genome.wustl.edu	37	5	176518689	176518689	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002011.3	+1	reviewed	p.R203C	1.000	87	0%	29	44.8%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
FGFR4	2264	genome.wustl.edu	37	5	176523068	176523068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002011.3	+1	reviewed	p.R611Q	1.000	63	0%	46	41.3%	1	0%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like)
NSD1	64324	genome.wustl.edu	37	5	176662842	176662842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022455.4	+1	reviewed	p.R1273C	1.000	56	0%	107	34.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PRELID1	27166	genome.wustl.edu	37	5	176733521	176733521	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013237.2	+1	provisional	p.A204T	1.000	36	2.8%	20	45%	234	40.1%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
FAM193B	54540	genome.wustl.edu	37	5	176959445	176959445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019057.3	-1	validated	p.A312V	1.000	25	0%	13	30.8%	23	30.4%	benign(0.264)	tolerated(0.1)	neutral(0.314)	NULL
PROP1	5626	genome.wustl.edu	37	5	177419968	177419968	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006261.4	-1	reviewed	p.A141	0.431	213	0%	182	39%	0	-	-	-	-	NULL
MAPK9	5601	genome.wustl.edu	37	5	179674412	179674412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001135044.1	-1	reviewed	p.A239T	0.989	107	0%	100	14%	4	0%	unknown(0)	deleterious(0.04)	-	NULL
ZFP62	643836	genome.wustl.edu	37	5	180277551	180277551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152283.4	-1	validated	p.G255V	1.000	155	0%	196	40.3%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
BTNL3	10917	genome.wustl.edu	37	5	180431746	180431746	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_197975.1	+1	validated	p.D282	0.017	210	0%	142	34.5%	0	-	-	-	-	NULL
TUBB2B	347733	genome.wustl.edu	37	6	3225096	3225096	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178012.4	-1	reviewed	p.T409	1.000	82	0%	55	38.2%	259	6.9%	-	-	-	superfamily_Tubulin C-terminal domain-like
DSP	1832	genome.wustl.edu	37	6	7579588	7579588	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004415.2	+1	reviewed	p.N1055K	1.000	52	0%	66	36.4%	22	40.9%	benign(0.235)	tolerated(0.16)	neutral(0.083)	NULL
DSP	1832	genome.wustl.edu	37	6	7585418	7585418	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004415.2	+1	reviewed	p.I2641	0.145	43	0%	29	37.9%	100	48%	-	-	-	HMMSmart_SM00250,superfamily_Plakin repeat
GCNT2	2651	genome.wustl.edu	37	6	10586308	10586308	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145655.3	+1	reviewed	p.P29L	0.000	173	0%	229	39.3%	1	100%	benign(0)	tolerated(0.24)	neutral(0.037)	NULL
ERVFRD-1	405754	genome.wustl.edu	37	6	11104151	11104151	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207582.2	-1	validated	p.R465*	0.680	105	0%	72	41.7%	0	-	-	-	-	HMMPfam_TLV_coat
NEDD9	4739	genome.wustl.edu	37	6	11185649	11185649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142393.1	-1	validated	p.L751I	1.000	221	0%	133	13.5%	32	34.3%	probably_damaging(0.999)	tolerated(0.14)	deleterious(0.740)	NULL
HIVEP1	3096	genome.wustl.edu	37	6	12123354	12123354	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002114.2	+1	validated	p.S1109L	0.789	66	0%	54	48.1%	2	100%	benign(0.013)	deleterious(0.01)	neutral(0.406)	NULL
HIVEP1	3096	genome.wustl.edu	37	6	12164274	12164274	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002114.2	+1	validated	p.C2579	0.000	151	0%	117	57.3%	32	59.3%	-	-	-	NULL
KDM1B	221656	genome.wustl.edu	37	6	18222178	18222178	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000449850	+1	known	p.H626R	0.992	205	0%	307	39.1%	5	40%	-	-	-	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
HIST1H2BA	255626	genome.wustl.edu	37	6	25727310	25727310	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_170610.2	+1	reviewed	p.S58	0.341	479	0%	458	36.2%	0	-	-	-	-	HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold
BTN3A3	10384	genome.wustl.edu	37	6	26451963	26451963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006994.4	+1	validated	p.R360M	0.000	218	0%	162	38.3%	14	57.1%	probably_damaging(0.999)	tolerated(0.15)	deleterious(0.732)	HMMSmart_PRY
PRSS16	10279	genome.wustl.edu	37	6	27222907	27222907	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005865.3	+1	reviewed	p.R491	1.000	116	0%	67	19.4%	11	9%	-	-	-	HMMPfam_Peptidase_S28
ZSCAN12	9753	genome.wustl.edu	37	6	28366080	28366080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000361028	-1	known	p.R35C	0.002	251	0%	315	36.2%	0	-	possibly_damaging(0.451)	deleterious(0.01)	deleterious(0.553)	NULL
HLA-F	3134	genome.wustl.edu	37	6	29692903	29692903	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098479.1	+1	reviewed	p.L236	0.776	77	0%	45	44.4%	40	15%	-	-	-	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726
TRIM10	10107	genome.wustl.edu	37	6	30128271	30128271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006778.3	-1	validated	p.R122Q	0.810	86	0%	38	18.4%	0	-	probably_damaging(0.999)	tolerated(0.15)	deleterious(0.732)	HMMPfam_zf-B_box,HMMSmart_SM00336
MDC1	9656	genome.wustl.edu	37	6	30673800	30673800	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014641.2	-1	reviewed	p.N1054D	0.000	122	0%	86	39.5%	2	0%	possibly_damaging(0.642)	tolerated(0.65)	neutral(0.228)	NULL
IER3	8870	genome.wustl.edu	37	6	30711944	30711944	+	Splice_Site	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000376382	-1	novel	e3-1	0.400	26	0%	16	25%	43	0%	unknown(0)	tolerated(0.12)	-	-
SKIV2L	6499	genome.wustl.edu	37	6	31928234	31928234	+	Missense_Mutation	SNP	C	C	T	rs140350010	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006929.4	+1	reviewed	p.S127L	0.990	87	0%	58	41.4%	8	62.5%	probably_damaging(0.969)	deleterious(0.02)	deleterious(0.794)	NULL
BTNL2	56244	genome.wustl.edu	37	6	32362771	32362771	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019602.1	-1	provisional	p.E370D	0.005	143	0%	62	33.9%	0	-	possibly_damaging(0.68)	deleterious(0.02)	deleterious(0.625)	HMMPfam_C2-set_2,superfamily_Immunoglobulin
ITPR3	3710	genome.wustl.edu	37	6	33645385	33645385	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002224.2	+1	validated	p.L1209	1.000	54	1.9%	28	46.4%	24	33.3%	-	-	-	HMMPfam_RYDR_ITPR
PACSIN1	29993	genome.wustl.edu	37	6	34500262	34500262	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020804.2	+1	validated	p.S430	0.998	42	0%	23	43.5%	0	-	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
SCUBE3	222663	genome.wustl.edu	37	6	35195408	35195408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152753.2	+1	provisional	p.C46Y	1.000	126	0%	68	48.5%	4	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
ZNF76	7629	genome.wustl.edu	37	6	35254164	35254164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003427.3	+1	provisional	p.R74C	1.000	77	0%	67	43.3%	9	33.3%	possibly_damaging(0.795)	deleterious(0)	deleterious(0.743)	NULL
MDGA1	266727	genome.wustl.edu	37	6	37622627	37622627	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153487.3	-1	validated	p.V221M	1.000	134	0%	95	47.4%	4	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
KCNK5	8645	genome.wustl.edu	37	6	39162068	39162068	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003740.3	-1	reviewed	p.V171I	1.000	87	0%	73	39.7%	1	0%	possibly_damaging(0.637)	tolerated(0.09)	deleterious(0.519)	HMMPfam_Ion_trans_2,superfamily_SSF81324
TREM1	54210	genome.wustl.edu	37	6	41243962	41243962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000334475	-1	known	p.R138Q	0.000	121	0%	120	40.8%	7	0%	benign(0.032)	tolerated(0.47)	neutral(0.012)	NULL
TAF8	129685	genome.wustl.edu	37	6	42034111	42034111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138572.2	+1	reviewed	p.R184H	1.000	80	0%	48	35.4%	1	0%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_TAF8_C
KIAA0240	23506	genome.wustl.edu	37	6	42796577	42796577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015349.1	+1	validated	p.T169M	1.000	93	0%	62	40.3%	5	20%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
PPP2R5D	5528	genome.wustl.edu	37	6	42974956	42974956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006245.2	+1	reviewed	p.T182M	1.000	107	0%	64	43.8%	16	62.5%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_B56
MRPL2	51069	genome.wustl.edu	37	6	43024149	43024149	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015950.3	-1	reviewed	p.H100	1.000	109	0%	85	24.7%	35	34.2%	-	-	-	HMMPfam_Ribosomal_L2,superfamily_Nucleic_acid_OB
CUL9	23113	genome.wustl.edu	37	6	43192121	43192121	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015089.2	+1	validated	p.L2498M	1.000	166	0%	145	37.2%	37	45.9%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
GTPBP2	54676	genome.wustl.edu	37	6	43590428	43590428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019096.3	-1	validated	p.R470Q	1.000	50	0%	19	36.8%	24	25%	possibly_damaging(0.687)	deleterious(0.04)	deleterious(0.595)	HMMPfam_GTP_EFTU_D2,superfamily_Translation proteins
CAPN11	11131	genome.wustl.edu	37	6	44140064	44140064	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007058.3	+1	reviewed	p.I145	0.929	81	0%	55	40%	0	-	-	-	-	HMMPfam_Peptidase_C2,HMMSmart_CysPc,superfamily_SSF54001
EFHC1	114327	genome.wustl.edu	37	6	52303388	52303388	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018100.3	+1	reviewed	p.Q191R	1.000	57	0%	58	13.8%	0	-	benign(0.001)	tolerated(1)	-	HMMSmart_SM00676
FAM135A	57579	genome.wustl.edu	37	6	71248051	71248051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105531.2	+1	validated	p.R1196Q	1.000	104	0%	161	41%	10	30%	possibly_damaging(0.796)	deleterious(0.04)	deleterious(0.648)	HMMPfam_DUF676,superfamily_SSF53474
KCNQ5	56479	genome.wustl.edu	37	6	73904416	73904416	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019842.3	+1	reviewed	p.T693M	1.000	115	0.9%	73	37%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
COL12A1	1303	genome.wustl.edu	37	6	75866132	75866132	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004370.5	-1	reviewed	p.R1031C	0.770	407	0%	519	43.4%	3	0%	probably_damaging(0.989)	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
FILIP1	27145	genome.wustl.edu	37	6	76124490	76124490	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015687.2	-1	validated	p.R67*	0.005	152	0%	248	41.9%	0	-	-	-	-	HMMPfam_CortBP2
DOPEY1	23033	genome.wustl.edu	37	6	83863319	83863319	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015018.2	+1	validated	p.V2073	0.978	305	0%	700	41.6%	7	71.4%	-	-	-	NULL
RARS2	57038	genome.wustl.edu	37	6	88239365	88239365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020320.3	-1	reviewed	p.R258H	1.000	81	0%	165	38.2%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_tRNA-synt_1d,superfamily_Nucleotidylyl transferase
MDN1	23195	genome.wustl.edu	37	6	90388392	90388392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014611.1	-1	provisional	p.R4113Q	0.685	194	0%	243	35.4%	3	33.3%	possibly_damaging(0.898)	tolerated(0.06)	deleterious(0.677)	NULL
MDN1	23195	genome.wustl.edu	37	6	90403821	90403821	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014611.1	-1	provisional	p.V3285I	0.000	158	0%	151	41.7%	3	33.3%	benign(0)	tolerated(1)	-	NULL
MDN1	23195	genome.wustl.edu	37	6	90410463	90410463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014611.1	-1	provisional	p.R2847H	0.997	146	0%	112	10.7%	0	-	probably_damaging(0.995)	tolerated(0.11)	deleterious(0.729)	NULL
MAP3K7	6885	genome.wustl.edu	37	6	91263240	91263240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145331.1	-1	reviewed	p.R225C	1.000	107	0%	117	27.4%	21	52.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MAP3K7	6885	genome.wustl.edu	37	6	91278305	91278305	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145331.1	-1	reviewed	p.V90A	1.000	117	0%	218	42.7%	7	71.4%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MANEA	79694	genome.wustl.edu	37	6	96054060	96054060	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024641.2	+1	validated	p.L390V	0.631	77	0%	100	17%	2	0%	benign(0.078)	tolerated(0.16)	neutral(0.065)	NULL
FUT9	10690	genome.wustl.edu	37	6	96651546	96651546	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006581.3	+1	validated	p.T172M	0.033	76	0%	57	12.3%	0	-	benign(0)	tolerated(0.05)	neutral(0.345)	HMMPfam_Glyco_transf_10
PRDM1	639	genome.wustl.edu	37	6	106553111	106553111	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001198.3	+1	reviewed	p.T359M	0.853	39	0%	22	54.5%	2	0%	possibly_damaging(0.44)	deleterious(0)	deleterious(0.588)	NULL
HS3ST5	222537	genome.wustl.edu	37	6	114383949	114383949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153612.3	-1	validated	p.V21I	0.981	137	0%	119	25.2%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
DCBLD1	285761	genome.wustl.edu	37	6	117859847	117859847	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173674.1	+1	provisional	p.S275	0.991	125	0%	119	52.1%	9	22.2%	-	-	-	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,superfamily_Galactose-binding domain-like
CTAGE9	643854	genome.wustl.edu	37	6	132030107	132030107	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145659.1	-1	provisional	p.A684V	0.000	128	0%	160	5.6%	23	0%	benign(0.029)	tolerated(0.12)	neutral(0.262)	NULL
ALDH8A1	64577	genome.wustl.edu	37	6	135254073	135254073	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022568.2	-1	reviewed	p.T230	0.053	58	0%	28	39.3%	0	-	-	-	-	HMMPfam_Aldedh,superfamily_ALDH-like
PDE7B	27115	genome.wustl.edu	37	6	136512835	136512835	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018945.3	+1	reviewed	p.G404C	0.915	42	0%	29	48.3%	2	0%	possibly_damaging(0.504)	deleterious(0.02)	deleterious(0.551)	HMMPfam_PDEase_I,superfamily_HD-domain/PDEase-like
SLC35D3	340146	genome.wustl.edu	37	6	137245251	137245251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001008783.1	+1	provisional	p.P223L	0.999	55	0%	22	36.4%	0	-	probably_damaging(1)	tolerated(0.43)	deleterious(0.513)	HMMPfam_UAA
HIVEP2	3097	genome.wustl.edu	37	6	143095286	143095286	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006734.3	-1	provisional	p.A197V	1.000	201	0%	167	40.1%	2	50%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
PLAGL1	5325	genome.wustl.edu	37	6	144269215	144269215	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080951.1	-1	reviewed	p.T20M	1.000	79	0%	72	37.5%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
UTRN	7402	genome.wustl.edu	37	6	144759958	144759958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007124.2	+1	reviewed	p.R440H	1.000	91	0%	102	42.2%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
UTRN	7402	genome.wustl.edu	37	6	145069599	145069599	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007124.2	+1	reviewed	p.P2719	0.068	113	0%	97	48.5%	5	60%	-	-	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
ADGB	79747	genome.wustl.edu	37	6	147012388	147012388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024694.3	+1	provisional	p.R483H	0.997	151	0.7%	190	42.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00230
SASH1	23328	genome.wustl.edu	37	6	148840977	148840977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015278.3	+1	validated	p.R386H	1.000	37	0%	26	38.5%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SYNE1	23345	genome.wustl.edu	37	6	152640109	152640109	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182961.2	-1	reviewed	p.T5426	1.000	214	0%	340	43.5%	0	-	-	-	-	NULL
OPRM1	4988	genome.wustl.edu	37	6	154410980	154410980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145279.1	+1	reviewed	p.A197T	1.000	83	0%	63	20.6%	0	-	probably_damaging(0.965)	deleterious(0.04)	deleterious(0.756)	HMMPfam_7tm_1,superfamily_SSF81321
SLC22A1	6580	genome.wustl.edu	37	6	160543205	160543205	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003057.2	+1	reviewed	p.A80T	0.000	56	0%	30	36.7%	0	-	benign(0)	tolerated(0.51)	neutral(0.009)	NULL
MAP3K4	4216	genome.wustl.edu	37	6	161513118	161513118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005922.2	+1	reviewed	p.R1071Q	1.000	153	0%	253	15%	12	16.6%	benign(0.07)	tolerated(0.37)	neutral(0.024)	NULL
WDR27	253769	genome.wustl.edu	37	6	170064343	170064343	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182552.3	-1	validated	p.R275C	0.933	128	0%	101	40.6%	8	25%	benign(0.002)	tolerated(0.08)	neutral(0.300)	NULL
PDGFA	5154	genome.wustl.edu	37	7	552067	552067	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000400761	-1	known	p.P69S	0.563	34	0%	21	19%	20	55%	-	-	-	HMMPfam_PDGF_N
ELFN1	392617	genome.wustl.edu	37	7	1784464	1784464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128636.2	+1	validated	p.A78T	1.000	80	0%	42	33.3%	0	-	-	-	-	superfamily_L domain-like
SNX8	29886	genome.wustl.edu	37	7	2296539	2296539	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013321.1	-1	provisional	p.F418	1.000	116	0%	61	34.4%	65	38.4%	-	-	-	NULL
ACTB	60	genome.wustl.edu	37	7	5568086	5568086	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001101.3	-1	reviewed	p.R210C	1.000	68	0%	42	42.9%	4871	45.2%	probably_damaging(0.974)	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
EIF2AK1	27102	genome.wustl.edu	37	7	6077078	6077078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014413.3	-1	reviewed	p.G437R	1.000	288	0%	354	32.2%	57	54.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MIOS	54468	genome.wustl.edu	37	7	7613140	7613140	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019005.3	+1	validated	p.R345Q	1.000	69	0%	71	36.6%	5	0%	probably_damaging(0.98)	tolerated(0.36)	neutral(0.444)	superfamily_WD40 repeat-like
THSD7A	221981	genome.wustl.edu	37	7	11521471	11521471	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015204.2	-1	validated	p.T654M	1.000	178	0%	124	41.9%	5	20%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ETV1	2115	genome.wustl.edu	37	7	13971370	13971370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004956.4	-1	validated	p.R187C	1.000	158	0%	113	46.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ETS_PEA3_N
AHR	196	genome.wustl.edu	37	7	17367383	17367383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001621.4	+1	validated	p.A121T	1.000	212	0%	572	39.5%	9	22.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00091,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain)
STK31	56164	genome.wustl.edu	37	7	23776635	23776635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031414.3	+1	reviewed	p.A319T	0.922	94	0%	211	42.7%	0	-	benign(0.002)	deleterious(0.02)	neutral(0.383)	NULL
HOXA11	3207	genome.wustl.edu	37	7	27224700	27224700	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005523.5	-1	reviewed	p.V22I	1.000	89	0%	53	41.5%	4	25%	possibly_damaging(0.86)	deleterious(0.03)	deleterious(0.697)	NULL
SCRN1	9805	genome.wustl.edu	37	7	29966080	29966080	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145514.1	-1	reviewed	p.I378	0.992	124	0%	82	35.4%	20	30%	-	-	-	NULL
SCRN1	9805	genome.wustl.edu	37	7	29983652	29983652	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145514.1	-1	reviewed	p.R182H	0.998	188	0%	157	42%	17	47%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
NOD1	10392	genome.wustl.edu	37	7	30491063	30491063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006092.2	-1	reviewed	p.R657H	1.000	79	0%	43	16.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GARS	2617	genome.wustl.edu	37	7	30655597	30655597	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002047.2	+1	reviewed	p.L373I	0.625	123	0.8%	129	36.4%	30	26.6%	benign(0)	tolerated(0.15)	neutral(0.241)	HMMPfam_tRNA-synt_2b,superfamily_Class II aaRS and biotin synthetases
EEPD1	80820	genome.wustl.edu	37	7	36278593	36278593	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030636.2	+1	validated	e2-1	1.000	178	0%	254	24%	0	-	-	-	-	-
TRGV5	6978	genome.wustl.edu	37	7	38389074	38389074	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000390344	-1	known	p.S79L	0.003	138	0%	161	10.6%	0	-	probably_damaging(0.999)	tolerated(0.33)	deleterious(0.514)	HMMPfam_V-set,superfamily_Immunoglobulin
POU6F2	11281	genome.wustl.edu	37	7	39504001	39504001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007252.3	+1	reviewed	p.E598K	1.000	102	0%	53	17%	0	-	probably_damaging(0.992)	tolerated(0.06)	deleterious(0.770)	NULL
GLI3	2737	genome.wustl.edu	37	7	42005226	42005226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000168.5	-1	reviewed	p.P1149S	0.507	55	0%	32	34.4%	5	80%	benign(0.007)	tolerated(0.15)	neutral(0.241)	NULL
MRPL32	64983	genome.wustl.edu	37	7	42974676	42974676	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031903.2	+1	reviewed	p.R85C	1.000	121	0%	132	36.4%	80	48.7%	benign(0.019)	deleterious(0)	neutral(0.446)	NULL
NACAD	23148	genome.wustl.edu	37	7	45124308	45124308	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000258775	-1	known	p.A491T	0.011	80	0%	45	35.6%	0	-	possibly_damaging(0.888)	deleterious(0)	deleterious(0.792)	NULL
ZNF117	51351	genome.wustl.edu	37	7	64439613	64439613	+	Missense_Mutation	SNP	T	T	A	rs3807068	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015852.3	-1	validated	p.K112N	0.000	97	0%	253	42.3%	4	50%	benign(0.126)	tolerated(0.52)	neutral(0.019)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC442572	442572	genome.wustl.edu	37	7	66751332	66751332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_499314.5	+1	model	p.R353C	0.529	305	0%	273	31.9%	0	-	-	-	-	NULL
POM121	9883	genome.wustl.edu	37	7	72411054	72411054	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_172020.1	+1	reviewed	p.S290	0.001	215	0%	180	22.8%	5	0%	-	-	-	NULL
ELN	2006	genome.wustl.edu	37	7	73470731	73470731	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000501.2	+1	reviewed	p.P427	0.164	301	0%	212	39.2%	18	16.6%	-	-	-	PatternScan_ENDONUCLEASE_III_2
CLIP2	7461	genome.wustl.edu	37	7	73814755	73814755	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003388.4	+1	reviewed	p.S979L	0.097	55	0%	22	40.9%	3	33.3%	benign(0.059)	tolerated(0.17)	neutral(0.063)	NULL
GTF2IRD1	9569	genome.wustl.edu	37	7	74015406	74015406	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016328.1	+1	reviewed	p.R904W	0.994	137	0%	122	38.5%	42	47.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
STYXL1	51657	genome.wustl.edu	37	7	75625796	75625796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016086.2	-1	validated	p.P311L	0.553	228	0%	160	34.4%	63	36.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
LOC100288807	100288807	genome.wustl.edu	37	7	76689804	76689804	+	Missense_Mutation	SNP	C	C	T	rs184595508	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002342739.1	-1	model	p.R9H	0.008	99	0%	67	40.3%	3	100%	-	-	-	NULL
SEMA3D	223117	genome.wustl.edu	37	7	84628893	84628893	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152754.2	-1	validated	p.Q733*	1.000	291	0%	245	40%	13	61.5%	-	-	-	NULL
KIAA1324L	222223	genome.wustl.edu	37	7	86521131	86521131	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142749.2	-1	validated	p.C980F	1.000	160	0%	253	39.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ABCB4	5244	genome.wustl.edu	37	7	87069628	87069628	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018849.2	-1	reviewed	p.S483P	1.000	201	0%	237	23.2%	0	-	benign(0.162)	deleterious(0.01)	neutral(0.420)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCB1	5243	genome.wustl.edu	37	7	87179322	87179322	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000927.3	-1	reviewed	p.R467W	1.000	201	0%	167	47.3%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
AKAP9	10142	genome.wustl.edu	37	7	91729000	91729000	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005751.4	+1	reviewed	e44-1	0.996	114	0%	145	34.5%	0	-	-	-	-	-
TRRAP	8295	genome.wustl.edu	37	7	98547176	98547176	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003496.2	+1	validated	p.R1617H	1.000	59	0%	30	43.3%	3	66.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_ARM repeat
ARPC1A	10552	genome.wustl.edu	37	7	98951704	98951704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006409.2	+1	reviewed	p.D225N	1.000	125	0%	65	27.7%	228	45.6%	benign(0.316)	tolerated(0.13)	neutral(0.352)	HMMSmart_SM00320,superfamily_WD40 repeat-like
PTCD1	26024	genome.wustl.edu	37	7	99032633	99032633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015545.2	-1	validated	p.T78M	0.000	96	0%	54	16.7%	4	0%	benign(0.013)	tolerated(0.22)	neutral(0.043)	NULL
C7orf43	55262	genome.wustl.edu	37	7	99752784	99752784	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000456769	-1	known	p.G437R	0.003	55	0%	21	33.3%	19	47.3%	-	-	-	NULL
SPDYE3	441272	genome.wustl.edu	37	7	99909552	99909552	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000332397	+1	known	p.V242M	0.052	73	0%	75	41.3%	0	-	unknown(0)	deleterious(0)	-	NULL
ZAN	7455	genome.wustl.edu	37	7	100358107	100358107	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003386.1	+1	reviewed	p.G1264S	1.000	302	0%	188	44.1%	0	-	probably_damaging(0.999)	-	-	HMMPfam_VWD,HMMSmart_SM00216
SLC12A9	56996	genome.wustl.edu	37	7	100459099	100459099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020246.2	+1	validated	p.A477T	0.981	82	0%	27	40.7%	28	35.7%	benign(0.033)	tolerated(0.1)	neutral(0.288)	HMMPfam_AA_permease
SRRT	51593	genome.wustl.edu	37	7	100482557	100482557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015908.5	+1	validated	p.R352Q	1.000	130	0%	90	43.3%	93	46.2%	possibly_damaging(0.516)	tolerated(0.4)	neutral(0.190)	NULL
FIS1	51024	genome.wustl.edu	37	7	100883107	100883107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016068.2	-1	validated	p.V147M	0.994	29	0%	19	52.6%	153	32%	unknown(0)	-	-	NULL
MLL5	55904	genome.wustl.edu	37	7	104741995	104741995	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018682.3	+1	reviewed	p.C616R	1.000	89	0%	184	38%	5	40%	unknown(0)	deleterious(0.01)	-	NULL
DLD	1738	genome.wustl.edu	37	7	107545882	107545882	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000108.3	+1	reviewed	p.Q172R	1.000	115	0%	209	34.9%	35	37.1%	benign(0.001)	tolerated(0.17)	neutral(0.059)	HMMPfam_Pyr_redox_2,superfamily_SSF51905
LAMB4	22798	genome.wustl.edu	37	7	107669621	107669621	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007356.2	-1	validated	p.K1671N	0.052	264	0%	431	20.4%	0	-	benign(0.004)	tolerated(0.36)	neutral(0.020)	NULL
LAMB4	22798	genome.wustl.edu	37	7	107748134	107748134	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007356.2	-1	validated	p.V178A	0.995	154	0%	207	45.4%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_Laminin_N,HMMSmart_SM00136
DOCK4	9732	genome.wustl.edu	37	7	111449434	111449434	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000445943	-1	known	p.S1034L	0.927	167	0%	258	34.9%	0	-	-	-	-	NULL
TMEM168	64418	genome.wustl.edu	37	7	112407412	112407412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022484.4	-1	validated	p.R645H	0.993	106	0%	113	31.9%	16	18.7%	benign(0.083)	tolerated(0.06)	neutral(0.329)	NULL
MDFIC	29969	genome.wustl.edu	37	7	114655851	114655851	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000393486	+1	known	p.C201	1.000	242	0%	287	42.2%	28	10.7%	-	-	-	PatternScan_EGF_1
SLC13A1	6561	genome.wustl.edu	37	7	122809310	122809310	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022444.3	-1	validated	p.P149S	1.000	166	0%	133	39.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Na_sulph_symp
SND1	27044	genome.wustl.edu	37	7	127326727	127326727	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014390.2	+1	validated	p.R47W	1.000	100	0%	62	37.1%	46	60.8%	benign(0.145)	tolerated(0.12)	neutral(0.273)	HMMSmart_SNc,superfamily_Staphylococal_nuclease_OB-fold
SMO	6608	genome.wustl.edu	37	7	128845459	128845459	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005631.3	+1	provisional	p.F252	1.000	102	0%	58	32.8%	16	56.2%	-	-	-	HMMPfam_Frizzled
PLXNA4	91584	genome.wustl.edu	37	7	132192961	132192961	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020911.1	-1	validated	p.N164	0.911	103	0%	54	48.1%	1	0%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
NUP205	23165	genome.wustl.edu	37	7	135320364	135320364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015135.2	+1	validated	p.G1699W	1.000	83	0%	226	40.7%	20	55%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	NULL
ZC3HAV1	56829	genome.wustl.edu	37	7	138764688	138764688	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020119.3	-1	reviewed	p.N333	0.001	79	0%	55	36.4%	10	40%	-	-	-	NULL
TTC26	79989	genome.wustl.edu	37	7	138822665	138822665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024926.2	+1	validated	p.D72N	1.000	234	0%	534	40.4%	2	50%	benign(0.241)	tolerated(0.24)	neutral(0.062)	superfamily_SSF48452
TBXAS1	6916	genome.wustl.edu	37	7	139653238	139653238	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001061.4	+1	reviewed	p.D175	0.000	101	0%	126	27.8%	1	0%	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
PARP12	64761	genome.wustl.edu	37	7	139756694	139756694	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022750.2	-1	provisional	p.S241N	0.000	83	0%	75	53.3%	10	40%	probably_damaging(0.962)	tolerated(0.09)	deleterious(0.702)	NULL
SLC37A3	84255	genome.wustl.edu	37	7	140080091	140080091	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207113.1	-1	validated	p.L63	0.998	149	0%	167	40.1%	9	66.6%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
DENND2A	27147	genome.wustl.edu	37	7	140266989	140266989	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015689.3	-1	validated	p.Y559C	0.997	76	0%	42	42.9%	8	62.5%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
ADCK2	90956	genome.wustl.edu	37	7	140386857	140386857	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052853.3	+1	validated	p.G458A	0.000	131	0%	79	22.8%	77	33.7%	benign(0.002)	tolerated(0.53)	neutral(0.007)	NULL
TRPV5	56302	genome.wustl.edu	37	7	142605757	142605757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019841.4	-1	reviewed	p.R705C	0.996	137	0%	119	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KEL	3792	genome.wustl.edu	37	7	142658564	142658564	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000420.2	-1	reviewed	p.V36M	0.000	42	0%	36	30.6%	0	-	possibly_damaging(0.525)	deleterious(0.04)	deleterious(0.526)	NULL
GSTK1	373156	genome.wustl.edu	37	7	142962282	142962282	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001143679.1	+1	reviewed	p.G161W	0.000	171	0%	125	43.2%	24	29.1%	benign(0.038)	deleterious(0)	neutral(0.447)	HMMPfam_DSBA
NOBOX	135935	genome.wustl.edu	37	7	144098372	144098372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080413.2	-1	provisional	p.G204V	0.000	111	0%	86	40.7%	0	-	possibly_damaging(0.828)	deleterious(0)	deleterious(0.758)	NULL
CNTNAP2	26047	genome.wustl.edu	37	7	147336243	147336243	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014141.5	+1	reviewed	p.T648M	0.999	121	0%	122	45.1%	0	-	possibly_damaging(0.859)	tolerated(0.06)	deleterious(0.655)	superfamily_Concanavalin A-like lectins/glucanases
ZNF425	155054	genome.wustl.edu	37	7	148801228	148801228	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001661.2	-1	validated	p.E579K	0.422	62	0%	21	42.9%	3	66.6%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	superfamily_SSF57667
ZNF746	155061	genome.wustl.edu	37	7	149171567	149171567	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152557.4	-1	validated	p.A615T	0.923	82	0%	42	42.9%	17	41.1%	benign(0.036)	deleterious(0)	neutral(0.447)	NULL
KRBA1	84626	genome.wustl.edu	37	7	149416750	149416750	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000255992	+1	known	p.T7	0.277	80	0%	68	38.2%	4	50%	-	-	-	NULL
ZNF467	168544	genome.wustl.edu	37	7	149462099	149462099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207336.1	-1	provisional	p.R498C	1.000	24	0%	18	33.3%	7	71.4%	possibly_damaging(0.923)	deleterious(0.04)	deleterious(0.722)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
SSPO	23145	genome.wustl.edu	37	7	149485878	149485878	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000378016	+1	known	p.G1366V	0.074	174	0.6%	85	14.1%	0	-	-	-	-	NULL
SLC4A2	6522	genome.wustl.edu	37	7	150772569	150772569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003040.3	+1	validated	p.T1092M	1.000	162	0%	79	51.9%	76	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HCO3_cotransp
AGAP3	116988	genome.wustl.edu	37	7	150840531	150840531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031946.4	+1	validated	p.V793M	1.000	101	0%	61	23%	32	53.1%	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	superfamily_Ankyrin repeat
CHPF2	54480	genome.wustl.edu	37	7	150935601	150935601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019015.1	+1	provisional	p.R718Q	1.000	108	0%	42	40.5%	88	51.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CHGN
GALNTL5	168391	genome.wustl.edu	37	7	151664434	151664434	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145292.3	+1	validated	p.W35R	0.000	132	0%	166	30.7%	0	-	benign(0)	tolerated(0.6)	neutral(0.004)	NULL
MLL3	58508	genome.wustl.edu	37	7	151845972	151845972	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_170606.2	-1	reviewed	p.P4347L	0.997	159	0%	136	31.6%	10	50%	unknown(0)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	151879229	151879229	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_170606.2	-1	reviewed	p.R1906*	0.956	69	0%	68	42.6%	3	100%	-	-	-	NULL
CSMD1	64478	genome.wustl.edu	37	8	3141766	3141766	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033225.5	-1	validated	p.S1352	0.000	138	0%	88	38.6%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	3165982	3165982	+	Silent	SNP	G	G	A	rs146926975	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033225.5	-1	validated	p.Y1226	0.998	157	0%	123	44.7%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD1	64478	genome.wustl.edu	37	8	3265578	3265578	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033225.5	-1	validated	p.L639	0.001	104	1%	101	45.5%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
SOX7	83595	genome.wustl.edu	37	8	10583400	10583400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031439.2	-1	reviewed	p.P339S	1.000	164	0%	93	38.7%	2	0%	probably_damaging(0.999)	tolerated(1)	deleterious(0.490)	NULL
DLC1	10395	genome.wustl.edu	37	8	13357421	13357421	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182643.2	-1	reviewed	p.R54C	0.998	122	0%	109	48.6%	0	-	benign(0.029)	deleterious(0.01)	neutral(0.407)	NULL
XPO7	23039	genome.wustl.edu	37	8	21824469	21824469	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001100161.1	+1	validated	p.S40R	1.000	71	0%	82	37.8%	5	20%	possibly_damaging(0.573)	deleterious(0.01)	deleterious(0.602)	HMMPfam_IBN_N,superfamily_ARM repeat
XPO7	23039	genome.wustl.edu	37	8	21849470	21849470	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001100161.1	+1	validated	p.N720	0.987	71	0%	76	34.2%	25	40%	-	-	-	superfamily_ARM repeat
BMP1	649	genome.wustl.edu	37	8	22052301	22052301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006129.4	+1	reviewed	p.S503N	1.000	60	0%	40	35%	26	34.6%	possibly_damaging(0.6)	deleterious(0)	deleterious(0.652)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
SLC39A14	23516	genome.wustl.edu	37	8	22273296	22273296	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128431.2	+1	validated	p.H255	0.998	75	0%	37	43.2%	3	66.6%	-	-	-	HMMPfam_Zip
KIAA1967	57805	genome.wustl.edu	37	8	22475027	22475027	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021174.4	+1	validated	p.A647V	1.000	401	0%	387	43.7%	59	47.4%	benign(0.076)	deleterious(0.02)	neutral(0.389)	NULL
EGR3	1960	genome.wustl.edu	37	8	22548283	22548283	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004430.2	-1	reviewed	p.S289	0.998	78	0%	26	34.6%	5	20%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TNFRSF10B	8795	genome.wustl.edu	37	8	22887129	22887129	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003842.4	-1	reviewed	p.R157H	0.000	64	1.6%	38	44.7%	21	61.9%	benign(0.324)	tolerated(0.18)	neutral(0.158)	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like
CDCA2	157313	genome.wustl.edu	37	8	25365030	25365030	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152562.2	+1	validated	p.M950V	0.000	119	0%	100	41%	13	61.5%	benign(0.013)	tolerated(0.59)	neutral(0.005)	NULL
EBF2	64641	genome.wustl.edu	37	8	25718576	25718576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022659.2	-1	validated	p.G444V	1.000	212	0%	250	33.2%	0	-	benign(0.016)	deleterious(0.03)	neutral(0.365)	NULL
ADRA1A	148	genome.wustl.edu	37	8	26722358	26722358	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033303.3	-1	reviewed	p.G43	0.963	127	0.8%	80	45%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
SCARA3	51435	genome.wustl.edu	37	8	27516175	27516175	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016240.2	+1	reviewed	p.T163S	1.000	80	0%	56	23.2%	15	46.6%	benign(0)	tolerated(0.93)	-	NULL
SCARA3	51435	genome.wustl.edu	37	8	27516477	27516477	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016240.2	+1	reviewed	p.G264S	0.717	50	0%	25	52%	23	56.5%	benign(0)	tolerated(0.8)	neutral(0.001)	NULL
C8orf80	389643	genome.wustl.edu	37	8	27886852	27886852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001010906.1	-1	provisional	p.D695E	0.996	146	0%	68	13.2%	0	-	benign(0.001)	tolerated(0.56)	neutral(0.006)	NULL
EXTL3	2137	genome.wustl.edu	37	8	28575164	28575164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001440.2	+1	provisional	p.V530M	0.802	61	0%	31	71%	9	44.4%	benign(0.264)	tolerated(0.1)	neutral(0.314)	NULL
KIF13B	23303	genome.wustl.edu	37	8	29006170	29006170	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015254.3	-1	validated	p.S579	0.976	224	0%	235	40.4%	11	36.3%	-	-	-	NULL
GTF2E2	2961	genome.wustl.edu	37	8	30469933	30469933	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002095.4	-1	validated	p.N144	1.000	188	0%	251	37.5%	43	46.5%	-	-	-	HMMPfam_TFIIE_beta,superfamily_SSF46785
BRF2	55290	genome.wustl.edu	37	8	37702418	37702418	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018310.2	-1	reviewed	p.R284*	0.173	58	0%	26	42.3%	20	25%	-	-	-	NULL
ASH2L	9070	genome.wustl.edu	37	8	37986395	37986395	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004674.3	+1	validated	p.V485I	0.555	71	0%	122	18.9%	27	40.7%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_SPRY,HMMSmart_SM00449
TM2D2	83877	genome.wustl.edu	37	8	38851086	38851086	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_078473.2	-1	validated	p.R137*	1.000	83	0%	94	35.1%	27	29.6%	-	-	-	NULL
AP3M2	10947	genome.wustl.edu	37	8	42022668	42022668	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001134296.1	+1	reviewed	p.S221	1.000	123	0%	122	11.5%	3	33.3%	-	-	-	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
IKBKB	3551	genome.wustl.edu	37	8	42166476	42166476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001556.1	+1	validated	p.G209S	1.000	55	0%	40	55%	18	33.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Kinase_like,HMMPfam_Pkinase
HOOK3	84376	genome.wustl.edu	37	8	42812295	42812295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032410.3	+1	validated	p.R176H	1.000	163	0%	349	39.3%	3	33.3%	benign(0.003)	tolerated(0.16)	neutral(0.059)	HMMPfam_HOOK
HGSNAT	138050	genome.wustl.edu	37	8	43048942	43048942	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152419.2	+1	reviewed	p.L474M	0.950	201	0%	252	41.7%	16	56.2%	probably_damaging(0.995)	tolerated(0.15)	deleterious(0.699)	HMMPfam_DUF2261
KIAA0146	23514	genome.wustl.edu	37	8	48641984	48641984	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080394.1	+1	predicted	p.R854H	0.022	75	0%	42	38.1%	61	39.3%	possibly_damaging(0.938)	tolerated(0.12)	deleterious(0.644)	NULL
RP1	6101	genome.wustl.edu	37	8	55534067	55534067	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006269.1	+1	reviewed	p.E181K	1.000	81	0%	37	40.5%	0	-	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	HMMPfam_DCX,HMMSmart_DCX,superfamily_SSF89837
TGS1	96764	genome.wustl.edu	37	8	56686269	56686269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024831.6	+1	validated	p.A31V	0.998	121	0%	124	36.3%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ASPH	444	genome.wustl.edu	37	8	62596634	62596634	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004318.3	-1	reviewed	p.V73I	0.996	183	0%	247	39.3%	31	38.7%	benign(0.431)	deleterious(0)	deleterious(0.585)	HMMPfam_Asp-B-Hydro_N
ENSG00000237810	0	genome.wustl.edu	37	8	63057194	63057194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000433538	-1	known	p.R14H	1.000	20	0%	15	46.7%	0	-	-	-	-	superfamily_Protein kinase-like (PK-like)
SULF1	23213	genome.wustl.edu	37	8	70536423	70536423	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128204.1	+1	validated	p.V614E	1.000	58	0%	23	26.1%	6	0%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	superfamily_Alkaline_phosphatase_core
LRRC69	100130742	genome.wustl.edu	37	8	92136765	92136765	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001129890.1	+1	provisional	p.P76	0.998	88	0%	166	43.4%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
FAM92A1	137392	genome.wustl.edu	37	8	94722047	94722047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145269.3	+1	predicted	p.R163C	1.000	124	0%	199	40.7%	19	36.8%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_DUF1208
INTS8	55656	genome.wustl.edu	37	8	95888460	95888460	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017864.2	+1	provisional	p.M925K	1.000	197	0%	393	38.9%	50	44%	possibly_damaging(0.837)	deleterious(0)	deleterious(0.764)	NULL
PLEKHF2	79666	genome.wustl.edu	37	8	96166877	96166877	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024613.3	+1	validated	p.R202Q	1.000	124	0%	102	37.3%	9	11.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FYVE,HMMSmart_FYVE,superfamily_FYVE_PHD_ZnF
VPS13B	157680	genome.wustl.edu	37	8	100587891	100587891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017890.3	+1	reviewed	p.R1677Q	0.863	139	0%	262	41.2%	1	0%	benign(0.006)	tolerated(0.5)	neutral(0.010)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100654448	100654448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017890.3	+1	reviewed	p.R1902M	1.000	106	0%	105	45.7%	3	100%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
POLR2K	5440	genome.wustl.edu	37	8	101165540	101165540	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005034.3	+1	reviewed	p.R58Q	0.997	329	0%	607	41.8%	141	49.6%	possibly_damaging(0.463)	tolerated(0.09)	neutral(0.449)	HMMSmart_SM00659,superfamily_RNA polymerase subunits
ODF1	4956	genome.wustl.edu	37	8	103572937	103572937	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024410.3	+1	reviewed	p.G193D	1.000	100	0%	67	41.8%	0	-	benign(0.176)	tolerated(0.07)	neutral(0.335)	superfamily_HSP20_chap
CSMD3	114788	genome.wustl.edu	37	8	113237046	113237046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198123.1	-1	validated	p.A3693V	1.000	456	0.2%	413	37.8%	0	-	benign(0.008)	deleterious(0.02)	neutral(0.383)	NULL
WDR67	93594	genome.wustl.edu	37	8	124140710	124140710	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145647.3	+1	validated	p.R692*	0.984	93	0%	126	39.7%	2	0%	-	-	-	NULL
MTSS1	9788	genome.wustl.edu	37	8	125568477	125568477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014751.4	-1	validated	p.T467N	1.000	107	0%	72	33.3%	1	100%	benign(0.009)	tolerated(0.36)	neutral(0.021)	NULL
GSDMC	56169	genome.wustl.edu	37	8	130789815	130789815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031415.2	-1	validated	p.R7C	0.000	128	0%	130	41.5%	1	0%	benign(0.351)	tolerated(0.18)	neutral(0.167)	HMMPfam_Gasdermin
TG	7038	genome.wustl.edu	37	8	134144148	134144148	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003235.4	+1	reviewed	p.S2652L	0.941	190	0%	187	42.2%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
WISP1	8840	genome.wustl.edu	37	8	134239766	134239766	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003882.2	+1	reviewed	p.D306V	0.998	169	0%	109	45%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00041,HMMPfam_Cys_knot
ST3GAL1	6482	genome.wustl.edu	37	8	134478194	134478194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003033.3	-1	reviewed	p.G149D	1.000	57	0%	42	50%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Glyco_transf_29
ZFAT	57623	genome.wustl.edu	37	8	135614246	135614246	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020863.3	-1	reviewed	p.L572	0.009	37	0%	16	25%	4	0%	-	-	-	NULL
ZFAT	57623	genome.wustl.edu	37	8	135614923	135614923	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020863.3	-1	reviewed	p.R347*	1.000	117	0%	48	14.6%	3	0%	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
COL22A1	169044	genome.wustl.edu	37	8	139767401	139767401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152888.1	-1	validated	p.R677Q	0.945	66	0%	55	41.8%	0	-	unknown(0)	tolerated(0.38)	-	NULL
DENND3	22898	genome.wustl.edu	37	8	142161751	142161751	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014957.2	+1	validated	p.V217I	0.997	115	0%	44	38.6%	5	20%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_DENN,HMMSmart_SM00799
CYP11B1	1584	genome.wustl.edu	37	8	143956376	143956376	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000497.3	-1	reviewed	p.H465	1.000	38	0%	26	38.5%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
SCRIB	23513	genome.wustl.edu	37	8	144887544	144887544	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182706.3	-1	validated	p.A803V	0.981	19	0.000	5	0.800	36	50%	possibly_damaging(0.838)	deleterious(0.01)	deleterious(0.726)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
EPPK1	83481	genome.wustl.edu	37	8	144941616	144941616	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031308.1	-1	validated	p.A1936T	1.000	47	0%	23	43.5%	1	0%	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat
EPPK1	83481	genome.wustl.edu	37	8	144941990	144941990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031308.1	-1	validated	p.R1811Q	0.000	256	0%	235	40.4%	0	-	probably_damaging(0.982)	tolerated(0.41)	neutral(0.442)	NULL
EPPK1	83481	genome.wustl.edu	37	8	144945533	144945533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031308.1	-1	validated	p.R630Q	0.000	75	0%	27	44.4%	1	100%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat
PLEC	5339	genome.wustl.edu	37	8	145001159	145001159	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_201380.2	-1	reviewed	p.S1448C	1.000	150	0%	56	10.7%	43	2.3%	unknown(0)	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
OPLAH	26873	genome.wustl.edu	37	8	145108232	145108232	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000426825	-1	known	p.H917	0.960	58	0%	34	11.8%	21	9.5%	-	-	-	HMMPfam_Hydantoinase_B
VPS28	51160	genome.wustl.edu	37	8	145650340	145650340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_183057.1	-1	reviewed	p.R97C	1.000	144	0%	64	17.2%	195	24.1%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_VPS28
KANK1	23189	genome.wustl.edu	37	9	732558	732558	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015158.2	+1	reviewed	p.R1062	0.997	81	0%	69	56.5%	4	50%	-	-	-	superfamily_ANK
SMARCA2	6595	genome.wustl.edu	37	9	2086961	2086961	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003070.3	+1	reviewed	p.K887E	1.000	97	0%	80	10%	7	42.8%	unknown(0)	deleterious(0.01)	-	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMARCA2	6595	genome.wustl.edu	37	9	2123881	2123881	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003070.3	+1	reviewed	p.R1309C	1.000	78	1.3%	39	82.1%	13	46.1%	possibly_damaging(0.936)	deleterious(0)	deleterious(0.826)	NULL
KDM4C	23081	genome.wustl.edu	37	9	7049119	7049119	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015061.3	+1	reviewed	p.A781	0.010	133	0%	83	67.5%	7	85.7%	-	-	-	NULL
PTPRD	5789	genome.wustl.edu	37	9	8518020	8518020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002839.3	-1	reviewed	p.M457I	1.000	367	0.3%	258	56.6%	0	-	benign(0.221)	tolerated(0.19)	neutral(0.072)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TEK	7010	genome.wustl.edu	37	9	27190556	27190556	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000459.3	+1	reviewed	p.V453M	0.913	147	0%	154	66.9%	4	0%	possibly_damaging(0.822)	deleterious(0.04)	deleterious(0.660)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
FANCG	2189	genome.wustl.edu	37	9	35074941	35074941	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004629.1	-1	reviewed	p.S540N	0.945	86	0%	48	75%	19	78.9%	benign(0.097)	tolerated(0.21)	neutral(0.051)	HMMSmart_SM00028,superfamily_TPR-like
UNC13B	10497	genome.wustl.edu	37	9	35398997	35398997	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006377.3	+1	reviewed	p.V1265I	1.000	96	0%	27	55.6%	8	100%	benign(0.201)	tolerated(0.37)	neutral(0.038)	HMMPfam_Membr_traf_MHD
RUSC2	9853	genome.wustl.edu	37	9	35548531	35548531	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001135999.1	+1	validated	p.D671	0.998	54	0%	23	60.9%	0	-	-	-	-	NULL
CD72	971	genome.wustl.edu	37	9	35611808	35611808	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001782.2	-1	validated	p.R315C	0.000	170	0%	118	43.2%	5	20%	benign(0.025)	tolerated(0.18)	neutral(0.057)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
PGM5	5239	genome.wustl.edu	37	9	71098928	71098928	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021965.3	+1	validated	p.Y481	0.652	156	0%	79	62%	0	-	-	-	-	HMMPfam_PGM_PMM_IV,superfamily_Phosphoglucomutase C-terminal domain
TMEM2	23670	genome.wustl.edu	37	9	74349777	74349777	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013390.2	-1	validated	p.E446D	1.000	174	0%	130	56.2%	3	66.6%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
FAM108B1	51104	genome.wustl.edu	37	9	74489860	74489860	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016014.2	-1	validated	p.W46*	1.000	155	0%	118	65.3%	5	80%	-	-	-	superfamily_SSF53474
ALDH1A1	216	genome.wustl.edu	37	9	75531961	75531961	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000689.3	-1	reviewed	p.I304V	0.998	147	0%	113	58.4%	151	90.7%	benign(0.001)	tolerated(0.22)	neutral(0.042)	HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,superfamily_ALDH-like
ZNF367	195828	genome.wustl.edu	37	9	99150565	99150565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153695.3	-1	validated	p.A336V	1.000	49	0%	22	77.3%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TSTD2	158427	genome.wustl.edu	37	9	100367838	100367838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_139246.4	-1	validated	p.R347K	0.992	102	0%	46	52.2%	5	40%	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
NCBP1	4686	genome.wustl.edu	37	9	100417219	100417219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002486.4	+1	reviewed	p.V410I	1.000	100	0%	65	72.3%	8	75%	benign(0.001)	tolerated(1)	-	HMMPfam_MIF4G_like,superfamily_ARM-type_fold
MRPL50	54534	genome.wustl.edu	37	9	104153019	104153019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019051.2	-1	reviewed	p.R69H	0.384	161	0%	90	68.9%	24	66.6%	possibly_damaging(0.871)	deleterious(0.03)	deleterious(0.703)	HMMPfam_Ribosomal_S39
SVEP1	79987	genome.wustl.edu	37	9	113173344	113173344	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153366.3	-1	validated	p.E2216G	1.000	89	0%	48	77.1%	0	-	probably_damaging(0.957)	tolerated(0.33)	neutral(0.425)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
LPAR1	1902	genome.wustl.edu	37	9	113704010	113704010	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001401.3	-1	reviewed	p.R162W	1.000	133	0%	72	65.3%	4	50%	benign(0.07)	tolerated(0.19)	neutral(0.054)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
DBC1	1620	genome.wustl.edu	37	9	121930269	121930269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014618.2	-1	validated	p.R460H	1.000	115	0%	37	64.9%	0	-	probably_damaging(0.969)	tolerated(0.55)	neutral(0.418)	NULL
ENG	2022	genome.wustl.edu	37	9	130592018	130592018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001114753.1	-1	reviewed	p.S103N	0.000	112	0%	30	43.3%	31	0%	benign(0.153)	deleterious(0.03)	neutral(0.378)	NULL
SPTAN1	6709	genome.wustl.edu	37	9	131349933	131349933	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130438.1	+1	validated	p.G943S	1.000	144	0%	54	68.5%	18	77.7%	possibly_damaging(0.666)	deleterious(0.04)	deleterious(0.585)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
PPAPDC3	84814	genome.wustl.edu	37	9	134165667	134165667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032728.3	+1	validated	p.R95W	1.000	33	0%	15	73.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
UCK1	83549	genome.wustl.edu	37	9	134404542	134404542	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031432.2	-1	validated	p.D161N	0.998	45	0.000	9	0.778	14	64.2%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_PRK,superfamily_SSF52540
KCNT1	57582	genome.wustl.edu	37	9	138651534	138651534	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020822.2	+1	validated	p.G288	0.939	72	0%	21	52.4%	0	-	-	-	-	HMMPfam_Ion_trans_2,superfamily_SSF81324
NOTCH1	4851	genome.wustl.edu	37	9	139391144	139391144	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017617.3	-1	reviewed	p.P2349	0.007	62	0%	18	55.6%	17	58.8%	-	-	-	NULL
NOTCH1	4851	genome.wustl.edu	37	9	139413167	139413167	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017617.3	-1	reviewed	p.N325	0.927	69	0%	14	50%	4	75%	-	-	-	HMMSmart_EGF_CA,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_SSF57196
LCN10	414332	genome.wustl.edu	37	9	139636438	139636438	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001712.2	-1	validated	p.T51I	0.130	47	0%	23	52.2%	0	-	possibly_damaging(0.901)	deleterious(0.01)	deleterious(0.762)	superfamily_Calycin
LCN6	158062	genome.wustl.edu	37	9	139639702	139639702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198946.2	-1	validated	p.A111V	0.998	100	0%	32	56.2%	0	-	benign(0.071)	tolerated(0.05)	neutral(0.350)	superfamily_Calycin
LARP4B	23185	genome.wustl.edu	37	10	860687	860687	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015155.1	-1	provisional	p.A642T	0.993	61	0%	43	11.6%	22	13.6%	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	NULL
ADARB2	105	genome.wustl.edu	37	10	1262947	1262947	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018702.2	-1	reviewed	p.D542	0.272	65	0%	34	38.2%	0	-	-	-	-	HMMPfam_A_deamin,HMMSmart_ADEAMc
FBXO18	84893	genome.wustl.edu	37	10	5948287	5948287	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032807.3	+1	reviewed	p.R200W	0.000	48	0%	15	40%	23	43.4%	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
FBXO18	84893	genome.wustl.edu	37	10	5960424	5960424	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032807.3	+1	reviewed	p.V746I	1.000	90	0%	46	34.8%	33	42.4%	benign(0.002)	tolerated(0.58)	neutral(0.005)	superfamily_SSF52540
PRPF18	8559	genome.wustl.edu	37	10	13656080	13656080	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003675.3	+1	reviewed	p.Y262	0.993	91	0%	204	29.9%	17	64.7%	-	-	-	HMMPfam_Prp18,superfamily_Functional domain of the splicing factor Prp18
PTER	9317	genome.wustl.edu	37	10	16553050	16553050	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001484.1	+1	validated	p.R282H	0.995	152	0%	187	40.6%	18	66.6%	benign(0.006)	tolerated(0.56)	neutral(0.006)	HMMPfam_PTE,superfamily_Metallo-dependent hydrolases
C10orf140	387640	genome.wustl.edu	37	10	21804401	21804401	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207371.3	-1	validated	p.L784P	1.000	230	0%	263	41.1%	0	-	probably_damaging(0.999)	tolerated(0.27)	deleterious(0.524)	NULL
SPAG6	9576	genome.wustl.edu	37	10	22676871	22676871	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012443.2	+1	reviewed	p.Y266	0.619	162	0%	210	29.5%	0	-	-	-	-	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
KIAA1462	57608	genome.wustl.edu	37	10	30336528	30336528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020848.2	-1	validated	p.R72C	0.000	71	0%	37	35.1%	1	0%	possibly_damaging(0.744)	deleterious(0.01)	deleterious(0.679)	NULL
ZNF438	220929	genome.wustl.edu	37	10	31138707	31138707	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001143766.1	-1	validated	p.N209	0.000	217	0%	164	42.1%	1	0%	-	-	-	NULL
ZWINT	11130	genome.wustl.edu	37	10	58119784	58119784	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007057.3	-1	reviewed	p.T84M	0.013	56	0%	18	38.9%	32	56.2%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
ANK3	288	genome.wustl.edu	37	10	61829879	61829879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020987.2	-1	reviewed	p.T3587M	1.000	370	0%	330	39.4%	0	-	probably_damaging(0.999)	-	-	NULL
JMJD1C	221037	genome.wustl.edu	37	10	64946091	64946091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032776.1	-1	validated	p.A2208V	0.998	146	0%	195	41%	9	55.5%	possibly_damaging(0.494)	deleterious(0.02)	deleterious(0.547)	NULL
JMJD1C	221037	genome.wustl.edu	37	10	64968886	64968886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032776.1	-1	validated	p.P935L	1.000	146	0%	239	49.8%	4	0%	probably_damaging(0.953)	deleterious(0.03)	deleterious(0.761)	NULL
HERC4	26091	genome.wustl.edu	37	10	69750942	69750942	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022079.2	-1	validated	p.T429M	1.000	18	0%	89	44.9%	5	40%	possibly_damaging(0.668)	deleterious(0.01)	deleterious(0.642)	NULL
MYPN	84665	genome.wustl.edu	37	10	69881901	69881901	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032578.2	+1	validated	p.R236C	0.096	63	0%	46	39.1%	0	-	possibly_damaging(0.736)	deleterious(0.02)	deleterious(0.652)	NULL
NEUROG3	50674	genome.wustl.edu	37	10	71332479	71332479	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020999.3	-1	reviewed	p.R107	0.890	44	0%	30	26.7%	0	-	-	-	-	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
KAT6B	23522	genome.wustl.edu	37	10	76788301	76788301	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012330.2	+1	validated	p.E1240G	1.000	69	0%	96	37.5%	14	42.8%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
SFTPA1	653509	genome.wustl.edu	37	10	81373717	81373717	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001093770.2	+1	reviewed	p.R199C	0.020	201	0%	123	10.6%	0	-	possibly_damaging(0.771)	tolerated(0.18)	neutral(0.342)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
LDB3	11155	genome.wustl.edu	37	10	88492709	88492709	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007078.2	+1	reviewed	p.K720	1.000	53	0%	32	43.8%	0	-	-	-	-	HMMPfam_LIM,HMMSmart_SM00132,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
PTEN	5728	genome.wustl.edu	37	10	89711900	89711900	+	Missense_Mutation	SNP	G	G	A	rs121913294		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000371953	+1	known	p.R173H	1.000	164	0%	345	41.4%	27	70.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T	rs121909219	byCluster	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000371953	+1	known	p.R233*	0.984	169	0%	174	52.3%	44	27.2%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
LIPK	643414	genome.wustl.edu	37	10	90497465	90497465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080518.1	+1	provisional	p.R248Q	0.000	281	0%	344	44.8%	0	-	benign(0.002)	tolerated(0.67)	neutral(0.003)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
LIPM	340654	genome.wustl.edu	37	10	90576576	90576576	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128215.1	+1	validated	p.R288*	1.000	158	0%	179	41.9%	0	-	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
KIF20B	9585	genome.wustl.edu	37	10	91469785	91469785	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016195.2	+1	validated	p.Y151	0.998	70	1.4%	184	37.5%	0	-	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
RPP30	10556	genome.wustl.edu	37	10	92655664	92655664	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001104546.1	+1	validated	p.V203M	0.959	134	0%	300	39.7%	35	37.1%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_RNase_P_p30,superfamily_PHP domain-like
ANKRD1	27063	genome.wustl.edu	37	10	92675538	92675538	+	Splice_Site	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014391.2	-1	reviewed	e7+1	1.000	66	0%	42	45.2%	0	-	-	-	-	-
MYOF	26509	genome.wustl.edu	37	10	95070330	95070330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013451.3	-1	reviewed	p.R1987Q	1.000	222	0%	225	16%	304	20.3%	probably_damaging(0.979)	tolerated(0.23)	neutral(0.463)	NULL
TM9SF3	56889	genome.wustl.edu	37	10	98287919	98287919	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020123.3	-1	validated	p.T470	0.002	79	0%	81	42%	82	41.4%	-	-	-	HMMPfam_EMP70
PIK3AP1	118788	genome.wustl.edu	37	10	98416609	98416609	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152309.2	-1	validated	p.T171	0.002	106	0%	52	32.7%	2	0%	-	-	-	NULL
RRP12	23223	genome.wustl.edu	37	10	99118724	99118724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015179.3	-1	validated	p.M1228I	0.000	54	0%	51	11.8%	35	2.8%	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
RRP12	23223	genome.wustl.edu	37	10	99133361	99133361	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015179.3	-1	validated	p.R666H	1.000	66	0%	28	28.6%	11	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NUC173,superfamily_ARM repeat
RRP12	23223	genome.wustl.edu	37	10	99133590	99133590	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015179.3	-1	validated	p.W620*	1.000	143	0%	67	38.8%	12	0%	-	-	-	HMMPfam_NUC173,superfamily_ARM repeat
MMS19	64210	genome.wustl.edu	37	10	99219025	99219025	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000444411	-1	known	p.P33L	0.766	96	0%	64	35.9%	86	37.2%	-	-	-	NULL
MMS19	64210	genome.wustl.edu	37	10	99220454	99220454	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022362.4	-1	validated	p.R823W	0.897	144	0%	162	33.3%	45	46.6%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	superfamily_ARM repeat
NDUFB8	4714	genome.wustl.edu	37	10	102286732	102286732	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005004.2	-1	validated	p.P104	1.000	124	0%	118	39%	327	41.5%	-	-	-	HMMPfam_NDUF_B8
FAM178A	55719	genome.wustl.edu	37	10	102683848	102683848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001136123.1	+1	validated	p.R364C	1.000	49	0%	73	39.7%	4	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PPRC1	23082	genome.wustl.edu	37	10	103908158	103908158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015062.3	+1	reviewed	p.R1477Q	0.997	223	0%	193	43.5%	41	48.7%	unknown(0)	tolerated(0.61)	-	NULL
SUFU	51684	genome.wustl.edu	37	10	104359302	104359302	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016169.3	+1	reviewed	e8+1	1.000	53	0%	36	33.3%	1	100%	-	-	-	-
PDCD11	22984	genome.wustl.edu	37	10	105194696	105194696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014976.1	+1	validated	p.T1270M	0.000	54	0%	46	41.3%	18	38.8%	possibly_damaging(0.861)	tolerated(0.1)	deleterious(0.619)	superfamily_Nucleic_acid_OB,HMMSmart_S1
PDCD11	22984	genome.wustl.edu	37	10	105202060	105202060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014976.1	+1	validated	p.R1600W	0.228	54	0%	52	50%	31	54.8%	possibly_damaging(0.753)	tolerated(0.07)	deleterious(0.596)	HMMSmart_HAT,superfamily_SSF48452
TACC2	10579	genome.wustl.edu	37	10	124013558	124013558	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_206862.2	+1	reviewed	p.M2945T	1.000	125	0%	210	38.6%	76	38.1%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMPfam_TACC
DMBT1	1755	genome.wustl.edu	37	10	124348687	124348687	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007329.2	+1	reviewed	p.C671S	0.990	226	0%	110	16.4%	1	0%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
DMBT1	1755	genome.wustl.edu	37	10	124390630	124390630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007329.2	+1	reviewed	p.R1931H	0.000	194	0%	125	44.8%	9	33.3%	benign(0.412)	tolerated(0.33)	neutral(0.157)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
DMBT1	1755	genome.wustl.edu	37	10	124395560	124395560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007329.2	+1	reviewed	p.R2072H	0.000	212	0%	178	38.8%	19	0%	benign(0.001)	tolerated(0.55)	neutral(0.007)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CPXM2	119587	genome.wustl.edu	37	10	125528083	125528083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198148.2	-1	validated	p.P420T	1.000	75	0%	37	21.6%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,superfamily_Zn-dependent exopeptidases
FAM196A	642938	genome.wustl.edu	37	10	128973601	128973601	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039762.2	-1	validated	p.T353	0.019	120	0%	74	41.9%	0	-	-	-	-	NULL
KNDC1	85442	genome.wustl.edu	37	10	135020652	135020652	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152643.6	+1	validated	p.A1197	0.751	24	0%	13	46.2%	0	-	-	-	-	NULL
PTDSS2	81490	genome.wustl.edu	37	11	488255	488255	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030783.1	+1	provisional	p.F226	1.000	85	0%	40	35%	21	52.3%	-	-	-	HMMPfam_PSS
LRRC56	115399	genome.wustl.edu	37	11	550080	550080	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198075.3	+1	validated	p.Y144	0.939	88	0%	46	50%	1	0%	-	-	-	HMMPfam_LRR_1,superfamily_SSF52075
C11orf35	256329	genome.wustl.edu	37	11	557447	557447	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173573.2	-1	validated	p.R222H	0.003	104	0%	65	41.5%	15	33.3%	benign(0.001)	tolerated(0.36)	neutral(0.020)	NULL
PNPLA2	57104	genome.wustl.edu	37	11	822402	822402	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020376.2	+1	provisional	p.Y164	0.492	97	0%	42	35.7%	162	27.1%	-	-	-	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like
MUC2	4583	genome.wustl.edu	37	11	1093846	1093846	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002457.2	+1	reviewed	p.A1885T	0.000	185	0%	85	45.9%	0	-	unknown(0)	tolerated(1)	-	NULL
MUC2	4583	genome.wustl.edu	37	11	1097284	1097284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002457.2	+1	reviewed	p.V2230I	0.016	67	0%	48	14.6%	0	-	possibly_damaging(0.58)	tolerated(0.12)	neutral(0.460)	HMMPfam_VWD,HMMSmart_SM00216
TOLLIP	54472	genome.wustl.edu	37	11	1309893	1309893	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019009.3	-1	validated	p.D160	0.180	81	0%	37	29.7%	65	35.3%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
LOC100287770	100287770	genome.wustl.edu	37	11	1776063	1776063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343068.1	+1	model	p.G42R	0.000	31	0%	20	45%	1	100%	-	-	-	NULL
TRPM5	29850	genome.wustl.edu	37	11	2432869	2432869	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014555.3	-1	validated	p.R868H	0.986	64	0%	29	20.7%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Ion_trans
CARS	833	genome.wustl.edu	37	11	3069109	3069109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001014437.1	-1	reviewed	p.A50T	0.998	66	0%	26	50%	3	33.3%	benign(0.017)	tolerated(0.15)	neutral(0.241)	NULL
OSBPL5	114879	genome.wustl.edu	37	11	3141705	3141705	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020896.3	-1	reviewed	p.D184	1.000	32	0%	13	30.8%	6	66.6%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
SMPD1	6609	genome.wustl.edu	37	11	6415528	6415528	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000543.3	+1	reviewed	p.P529	0.004	72	0%	44	40.9%	44	34%	-	-	-	superfamily_Metallo-dependent phosphatases
TRIM3	10612	genome.wustl.edu	37	11	6477399	6477399	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006458.2	-1	reviewed	p.R479H	0.992	115	0%	66	33.3%	16	50%	benign(0.182)	deleterious(0.04)	neutral(0.365)	superfamily_NHL repeat
OR6A2	8590	genome.wustl.edu	37	11	6816048	6816048	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003696.2	-1	provisional	p.R298C	0.810	120	0%	124	38.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF81321
EIF4G2	1982	genome.wustl.edu	37	11	10822544	10822544	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000429377	-1	known	p.Q575*	1.000	344	0%	386	36.3%	206	2.9%	-	-	-	NULL
GALNTL4	374378	genome.wustl.edu	37	11	11362477	11362477	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198516.2	-1	validated	p.P389	1.000	179	0%	88	31.8%	16	12.5%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
GALNTL4	374378	genome.wustl.edu	37	11	11454230	11454230	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198516.2	-1	validated	p.M178T	0.998	143	0%	99	52.5%	7	42.8%	benign(0.007)	deleterious(0)	neutral(0.445)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
ARNTL	406	genome.wustl.edu	37	11	13402764	13402764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001030272.1	+1	reviewed	p.T526M	1.000	78	0%	83	38.6%	11	54.5%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
PLEKHA7	144100	genome.wustl.edu	37	11	16810798	16810798	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175058.4	-1	validated	p.R1068*	1.000	43	0%	20	30%	17	47%	-	-	-	NULL
ABCC8	6833	genome.wustl.edu	37	11	17483186	17483186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000352.3	-1	reviewed	p.A256T	1.000	122	0%	60	45%	0	-	probably_damaging(0.988)	tolerated(0.47)	neutral(0.449)	NULL
PTPN5	84867	genome.wustl.edu	37	11	18751285	18751285	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006906.1	-1	validated	p.P470	0.951	37	0%	29	37.9%	0	-	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPN5	84867	genome.wustl.edu	37	11	18764922	18764922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006906.1	-1	validated	p.A116T	0.412	135	0%	95	33.7%	0	-	benign(0)	tolerated(1)	-	NULL
E2F8	79733	genome.wustl.edu	37	11	19251172	19251172	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024680.2	-1	validated	p.S574	0.003	158	0.6%	100	38%	5	20%	-	-	-	NULL
NAV2	89797	genome.wustl.edu	37	11	20070582	20070582	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182964.5	+1	validated	p.V1404A	0.622	80	0%	34	14.7%	2	50%	benign(0.119)	deleterious(0.01)	neutral(0.415)	NULL
LUZP2	338645	genome.wustl.edu	37	11	24750780	24750780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001009909.2	+1	validated	p.R43H	0.988	58	0%	51	39.2%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
DCDC5	100506627	genome.wustl.edu	37	11	30944050	30944050	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343054.1	-1	model	p.V196L	0.849	190	0%	413	43.1%	0	-	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
ELP4	26610	genome.wustl.edu	37	11	31653855	31653855	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019040.3	+1	reviewed	p.N277T	0.001	117	0%	155	39.4%	7	28.5%	benign(0)	tolerated(0.45)	neutral(0.012)	HMMPfam_PAXNEB
NAT10	55226	genome.wustl.edu	37	11	34158212	34158212	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024662.2	+1	validated	p.V684	0.275	105	0%	84	22.6%	40	55%	-	-	-	NULL
ABTB2	25841	genome.wustl.edu	37	11	34186275	34186275	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145804.1	-1	provisional	p.E463G	1.000	107	0%	39	46.2%	15	66.6%	benign(0.002)	tolerated(0.45)	neutral(0.012)	HMMSmart_ANK,superfamily_ANK
PAMR1	25891	genome.wustl.edu	37	11	35456329	35456329	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015430.2	-1	validated	p.T470A	0.026	85	0%	56	46.4%	7	28.5%	benign(0)	tolerated(0.78)	neutral(0.001)	HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
TRAF6	7189	genome.wustl.edu	37	11	36516569	36516569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004620.2	-1	reviewed	p.N212S	0.965	91	0%	198	35.9%	10	20%	benign(0)	tolerated(0.47)	neutral(0.011)	HMMPfam_zf-TRAF,superfamily_Traf_like
PHF21A	51317	genome.wustl.edu	37	11	45955585	45955585	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001101802.1	-1	validated	p.T659	0.998	102	1%	74	40.5%	19	42.1%	-	-	-	NULL
LOC100289572	100289572	genome.wustl.edu	37	11	47470533	47470533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343082.1	+1	model	p.C213Y	0.000	141	0%	81	19.8%	0	-	-	-	-	NULL
FAM180B	399888	genome.wustl.edu	37	11	47608204	47608204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356737	+1	known	p.R3C	0.002	56	0%	27	33.3%	0	-	unknown(0)	-	-	NULL
FAM180B	399888	genome.wustl.edu	37	11	47609656	47609656	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000356737	+1	known	p.A115	0.081	69	0%	23	47.8%	0	-	-	-	-	NULL
FNBP4	23360	genome.wustl.edu	37	11	47754204	47754204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015308.2	-1	validated	p.R569W	1.000	391	0.8%	560	43.2%	11	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OR5M1	390168	genome.wustl.edu	37	11	56380654	56380654	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004740.1	-1	provisional	p.I109F	0.005	201	0%	156	37.2%	0	-	probably_damaging(0.976)	tolerated(0.29)	neutral(0.447)	HMMPfam_7tm_1,superfamily_SSF81321
ZDHHC5	25921	genome.wustl.edu	37	11	57466283	57466283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015457.2	+1	validated	p.L459M	1.000	66	0%	40	10%	81	2.4%	possibly_damaging(0.885)	deleterious(0.01)	deleterious(0.752)	NULL
OR9Q2	219957	genome.wustl.edu	37	11	57958228	57958228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001005283.2	+1	validated	p.G89D	0.004	107	0%	68	11.8%	0	-	probably_damaging(1)	tolerated(0.83)	deleterious(0.500)	HMMPfam_7tm_1,superfamily_SSF81321
OR1S1	219959	genome.wustl.edu	37	11	57982864	57982864	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004458.1	+1	validated	p.G216	0.000	275	0%	259	13.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
FAM111B	374393	genome.wustl.edu	37	11	58893036	58893036	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198947.3	+1	validated	p.R489Q	0.001	39	0%	31	48.4%	22	50%	probably_damaging(0.994)	tolerated(0.21)	deleterious(0.496)	superfamily_Trypsin-like serine proteases
CD5	921	genome.wustl.edu	37	11	60889355	60889355	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014207.3	+1	validated	p.C360R	0.998	60	0%	30	33.3%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
VWCE	220001	genome.wustl.edu	37	11	61053874	61053874	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152718.2	-1	validated	p.C151	0.860	40	0%	33	30.3%	1	100%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
PPP1R32	220004	genome.wustl.edu	37	11	61252164	61252164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145017.2	+1	validated	p.R129Q	1.000	31	0%	23	30.4%	1	0%	probably_damaging(0.985)	tolerated(0.12)	deleterious(0.693)	NULL
SCGB1D4	404552	genome.wustl.edu	37	11	62064965	62064965	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_206998.1	-1	provisional	p.R74Q	0.003	146	0%	229	34.1%	0	-	unknown(0)	tolerated(0.07)	-	superfamily_Uteroglobin-like
LOC100287678	100287678	genome.wustl.edu	37	11	62563574	62563574	+	Missense_Mutation	SNP	G	G	A	rs191034414	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343090.1	+1	model	p.V69I	0.836	193	0%	141	40.4%	111	43.2%	-	-	-	NULL
SLC22A8	9376	genome.wustl.edu	37	11	62760810	62760810	+	Splice_Site	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004254.3	-1	reviewed	e10-2	0.925	127	0%	75	18.7%	0	-	-	-	-	-
NRXN2	9379	genome.wustl.edu	37	11	64390267	64390267	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015080.2	-1	reviewed	p.T1377	0.231	59	0%	30	33.3%	2	50%	-	-	-	NULL
MEN1	4221	genome.wustl.edu	37	11	64572650	64572650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000417021	-1	known	p.P401L	0.992	63	0%	35	34.3%	24	37.5%	-	-	-	HMMPfam_Menin
MEN1	4221	genome.wustl.edu	37	11	64575419	64575419	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000244.3	-1	reviewed	p.G205S	1.000	53	0%	42	11.9%	13	30.7%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Menin
MRPL49	740	genome.wustl.edu	37	11	64893016	64893016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004927.2	+1	reviewed	p.V96I	1.000	194	1%	155	43.9%	16	43.7%	probably_damaging(0.991)	tolerated(0.06)	deleterious(0.766)	HMMPfam_Img2
PCNXL3	399909	genome.wustl.edu	37	11	65385142	65385142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032223.2	+1	validated	p.R181Q	0.991	106	0.9%	62	38.7%	6	50%	possibly_damaging(0.907)	tolerated(0.3)	neutral(0.389)	NULL
FOSL1	8061	genome.wustl.edu	37	11	65660407	65660407	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005438.3	-1	reviewed	p.G256R	1.000	99	0%	37	43.2%	11	27.2%	unknown(0)	deleterious(0.01)	-	NULL
SART1	9092	genome.wustl.edu	37	11	65733558	65733558	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005146.4	+1	reviewed	p.E284Q	1.000	176	0%	92	25%	39	28.2%	possibly_damaging(0.915)	deleterious(0.01)	deleterious(0.772)	HMMPfam_SART-1
CD248	57124	genome.wustl.edu	37	11	66082378	66082378	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020404.2	-1	validated	p.I707	0.803	43	0%	34	52.9%	14	0%	-	-	-	NULL
RBM14	10432	genome.wustl.edu	37	11	66392817	66392817	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006328.3	+1	validated	p.S490	0.991	27	0%	10	60%	31	38.7%	-	-	-	NULL
SPTBN2	6712	genome.wustl.edu	37	11	66457571	66457571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006946.2	-1	reviewed	p.R1917W	1.000	160	0%	82	36.6%	11	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
ANKRD13D	338692	genome.wustl.edu	37	11	67067470	67067470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207354.2	+1	validated	p.V230M	0.996	65	0%	37	40.5%	57	33.3%	benign(0.151)	tolerated(0.28)	neutral(0.045)	NULL
GPR152	390212	genome.wustl.edu	37	11	67219785	67219785	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_206997.1	-1	validated	p.H137	0.000	17	0.000	6	0.667	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CABP2	51475	genome.wustl.edu	37	11	67287376	67287376	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016366.2	-1	reviewed	p.G175	0.002	32	0%	22	50%	0	-	-	-	-	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
TBX10	347853	genome.wustl.edu	37	11	67400523	67400523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005995.3	-1	provisional	p.V201M	1.000	200	0%	160	45.6%	0	-	probably_damaging(0.953)	tolerated(0.06)	deleterious(0.719)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd
ALDH3B2	222	genome.wustl.edu	37	11	67432918	67432918	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000695.3	-1	reviewed	p.A182T	0.998	90	0%	39	35.9%	9	33.3%	possibly_damaging(0.864)	tolerated(0.19)	neutral(0.384)	HMMPfam_Aldedh,superfamily_ALDH-like
MRGPRD	116512	genome.wustl.edu	37	11	68748320	68748320	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198923.2	-1	validated	p.S46G	0.014	64	0%	33	42.4%	0	-	benign(0.003)	tolerated(0.4)	neutral(0.016)	HMMPfam_7tm_1,superfamily_SSF81321
ANO1	55107	genome.wustl.edu	37	11	70007354	70007354	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018043.5	+1	validated	p.V556M	0.601	116	0%	65	43.1%	145	42%	benign(0.107)	tolerated(0.1)	neutral(0.295)	NULL
SHANK2	22941	genome.wustl.edu	37	11	70319250	70319250	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012309.3	-1	reviewed	p.A1163	0.457	197	0%	103	39.8%	6	50%	-	-	-	NULL
NUMA1	4926	genome.wustl.edu	37	11	71718270	71718270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006185.2	-1	validated	p.R1810C	1.000	38	0%	18	50%	217	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C11orf51	25906	genome.wustl.edu	37	11	71822259	71822259	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014042.2	-1	validated	p.R22*	1.000	120	0%	76	31.6%	44	20.4%	-	-	-	NULL
INPPL1	3636	genome.wustl.edu	37	11	71948267	71948267	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001567.3	+1	reviewed	p.P993	0.548	36	0%	28	57.1%	101	59.4%	-	-	-	NULL
INPPL1	3636	genome.wustl.edu	37	11	71949110	71949110	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001567.3	+1	reviewed	p.A1193T	0.987	52	0%	23	30.4%	91	26.3%	benign(0.008)	tolerated(0.51)	neutral(0.009)	HMMSmart_SAM,superfamily_SAM_homology
ATG16L2	89849	genome.wustl.edu	37	11	72537220	72537220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033388.1	+1	validated	p.R369C	1.000	41	0%	24	45.8%	23	47.8%	possibly_damaging(0.939)	deleterious(0.01)	deleterious(0.790)	HMMSmart_SM00320,superfamily_WD40 repeat-like
FCHSD2	9873	genome.wustl.edu	37	11	72549849	72549849	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014824.2	-1	validated	p.I737N	1.000	100	0%	86	43%	15	60%	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
PGM2L1	283209	genome.wustl.edu	37	11	74058231	74058231	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173582.3	-1	validated	p.V301I	1.000	94	0%	230	33.9%	7	28.5%	probably_damaging(0.976)	tolerated(0.07)	deleterious(0.737)	HMMPfam_PGM_PMM_II,superfamily_Phosphoglucomutase first 3 domains
LRRC32	2615	genome.wustl.edu	37	11	76370731	76370731	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128922.1	-1	reviewed	p.L636	0.301	148	0%	106	37.7%	3	0%	-	-	-	NULL
MYO7A	4647	genome.wustl.edu	37	11	76893595	76893595	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000260.3	+1	reviewed	p.G1079S	1.000	48	0%	41	31.7%	0	-	probably_damaging(0.959)	deleterious(0.05)	deleterious(0.748)	HMMSmart_SM00139
MYO7A	4647	genome.wustl.edu	37	11	76901163	76901163	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000260.3	+1	reviewed	p.P1243	0.000	39	0%	12	50%	0	-	-	-	-	HMMPfam_MyTH4,HMMSmart_SM00139
GAB2	9846	genome.wustl.edu	37	11	77936200	77936200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080491.2	-1	reviewed	p.A419V	0.690	134	0%	105	38.1%	4	25%	benign(0.052)	tolerated(0.13)	neutral(0.256)	NULL
FAT3	120114	genome.wustl.edu	37	11	92523334	92523334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001008781.2	+1	validated	p.A1521T	0.906	68	0%	52	42.3%	0	-	benign(0.047)	tolerated(0.99)	neutral(0.003)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
SESN3	143686	genome.wustl.edu	37	11	94918577	94918577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144665.2	-1	provisional	p.A202V	1.000	76	0%	92	33.7%	5	20%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_PA26
MAML2	84441	genome.wustl.edu	37	11	95712721	95712721	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032427.1	-1	validated	p.N954	0.024	464	0%	505	39.8%	10	60%	-	-	-	NULL
ARHGAP42	143872	genome.wustl.edu	37	11	100730331	100730331	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152432.2	+1	provisional	p.R120Q	1.000	140	0%	319	43.3%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PGR	5241	genome.wustl.edu	37	11	100909953	100909954	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000926.4	-1	reviewed	p.R899fs	1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain
MMP13	4322	genome.wustl.edu	37	11	102816439	102816439	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002427.3	-1	reviewed	p.P417	0.184	204	0%	492	42.5%	0	-	-	-	-	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
DYNC2H1	79659	genome.wustl.edu	37	11	103058206	103058206	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080463.1	+1	reviewed	p.R2344H	1.000	120	0%	142	41.5%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DDI1	414301	genome.wustl.edu	37	11	103907980	103907980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001711.2	+1	validated	p.A144T	0.075	47	0%	13	30.8%	0	-	possibly_damaging(0.946)	tolerated(0.32)	neutral(0.414)	NULL
SIK2	23235	genome.wustl.edu	37	11	111575824	111575824	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015191.1	+1	validated	p.Q354H	1.000	136	0%	126	31%	4	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_Protein kinase-like (PK-like)
DRD2	1813	genome.wustl.edu	37	11	113295287	113295287	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000795.3	-1	reviewed	p.A29	0.007	135	0%	102	46.1%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
ZBTB16	7704	genome.wustl.edu	37	11	114117961	114117961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001018011.1	+1	reviewed	p.R556W	1.000	57	0%	33	42.4%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FAM55A	120400	genome.wustl.edu	37	11	114401367	114401367	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000424269	-1	known	p.L121	0.754	407	0%	368	29.6%	0	-	-	-	-	superfamily_E set domains
SIK3	23387	genome.wustl.edu	37	11	116717125	116717125	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025164.3	-1	validated	p.Q1260R	1.000	151	0%	104	42.3%	34	29.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
MLL	4297	genome.wustl.edu	37	11	118350938	118350938	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005933.2	+1	validated	p.Q1207*	1.000	190	0.5%	384	39.3%	2	50%	-	-	-	NULL
HYOU1	10525	genome.wustl.edu	37	11	118918968	118918968	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130991.1	-1	reviewed	p.T790A	1.000	80	0%	43	11.6%	81	6.1%	benign(0.008)	tolerated(0.69)	neutral(0.002)	superfamily_Heat shock protein 70kD (HSP70) C-terminal subdomain
VPS11	55823	genome.wustl.edu	37	11	118951995	118951995	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000300793	+1	known	p.R877*	1.000	92	0%	70	11.4%	68	7.3%	-	-	-	NULL
ENSG00000245385	0	genome.wustl.edu	37	11	119205772	119205772	+	RNA	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000501918	-1	known	NULL	0.003	112	0%	82	42.7%	9	44.4%	-	-	-	-
USP2	9099	genome.wustl.edu	37	11	119228771	119228771	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004205.4	-1	validated	p.R448*	1.000	149	0%	134	41%	3	0%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
ARHGEF12	23365	genome.wustl.edu	37	11	120352127	120352127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015313.1	+1	reviewed	p.A1466T	0.820	154	0%	103	35%	25	40%	benign(0.167)	tolerated(0.09)	neutral(0.311)	NULL
SORL1	6653	genome.wustl.edu	37	11	121491775	121491775	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003105.4	+1	reviewed	p.L1964	0.048	135	0%	152	32.2%	33	39.3%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ZNF202	7753	genome.wustl.edu	37	11	123601309	123601309	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003455.2	-1	validated	p.T96	0.138	156	0%	86	39.5%	3	0%	-	-	-	HMMPfam_SCAN,HMMSmart_SM00431
ZNF202	7753	genome.wustl.edu	37	11	123601477	123601477	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003455.2	-1	validated	p.P40	0.998	124	0%	71	42.3%	2	50%	-	-	-	HMMPfam_SCAN
OR8B8	26493	genome.wustl.edu	37	11	124310427	124310427	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012378.1	-1	provisional	p.L185	0.000	124	0.8%	92	38%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8A1	390275	genome.wustl.edu	37	11	124440111	124440111	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001005194.1	+1	provisional	p.L49	0.001	175	0%	148	40.5%	0	-	-	-	-	superfamily_SSF81321
PKNOX2	63876	genome.wustl.edu	37	11	125255525	125255525	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022062.2	+1	validated	p.S102	0.542	170	0%	121	37.2%	4	50%	-	-	-	NULL
ARHGAP32	9743	genome.wustl.edu	37	11	128855932	128855932	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142685.1	-1	validated	p.D484N	1.000	193	0%	166	44.6%	3	33.3%	possibly_damaging(0.768)	deleterious(0.02)	deleterious(0.668)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
APLP2	334	genome.wustl.edu	37	11	129993532	129993532	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001642.2	+1	validated	p.T316	1.000	108	0%	73	37%	84	25%	-	-	-	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,superfamily_BPTI-like
ST14	6768	genome.wustl.edu	37	11	130066582	130066582	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021978.3	+1	reviewed	p.Y447	0.737	119	0%	80	41.2%	215	45.5%	-	-	-	HMMSmart_CUB,superfamily_CUB,superfamily_LDL_rcpt_classA_cys-rich
SNX19	399979	genome.wustl.edu	37	11	130784395	130784395	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014758.2	-1	validated	p.P480	0.042	167	0%	124	44.4%	9	44.4%	-	-	-	NULL
IQSEC3	440073	genome.wustl.edu	37	12	266295	266295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015232.1	+1	validated	p.R450Q	1.000	53	0%	30	26.7%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7
WNK1	65125	genome.wustl.edu	37	12	995171	995171	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018979.3	+1	reviewed	p.V1734A	0.000	144	0%	123	13.8%	26	0%	unknown(0)	tolerated(0.47)	-	NULL
ERC1	23085	genome.wustl.edu	37	12	1137086	1137086	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178040.2	+1	reviewed	p.R6H	1.000	50	0%	35	34.3%	5	40%	unknown(0)	deleterious(0)	-	NULL
ADIPOR2	79602	genome.wustl.edu	37	12	1863600	1863600	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024551.2	+1	validated	p.R31*	0.004	104	0%	126	42.9%	7	57.1%	-	-	-	NULL
TEAD4	7004	genome.wustl.edu	37	12	3129822	3129822	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003213.2	+1	reviewed	p.P202	0.000	43	0%	26	26.9%	18	38.8%	-	-	-	HMMPfam_TEA
C12orf4	57102	genome.wustl.edu	37	12	4609418	4609418	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020374.2	-1	predicted	p.N442	1.000	114	0%	104	34.6%	18	72.2%	-	-	-	HMMPfam_DUF2362
AKAP3	10566	genome.wustl.edu	37	12	4736731	4736731	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006422.2	-1	reviewed	p.A446V	0.001	168	0%	184	38.6%	0	-	benign(0.003)	tolerated(0.09)	neutral(0.296)	HMMPfam_AKAP_110,HMMSmart_SM00807
KCNA6	3742	genome.wustl.edu	37	12	4920613	4920613	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002235.3	+1	reviewed	p.T469M	1.000	174	0%	107	41.1%	0	-	possibly_damaging(0.866)	deleterious(0.04)	deleterious(0.684)	superfamily_SSF81324
VWF	7450	genome.wustl.edu	37	12	6122773	6122773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000552.3	-1	reviewed	p.D1832N	0.950	103	0%	104	45.2%	33	6%	benign(0.095)	tolerated(0.05)	neutral(0.352)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
SCNN1A	6337	genome.wustl.edu	37	12	6458129	6458129	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001038.5	-1	reviewed	p.V514I	0.873	199	1%	119	31.9%	86	33.7%	benign(0)	tolerated(1)	-	HMMPfam_ASC
GAPDH	2597	genome.wustl.edu	37	12	6647106	6647106	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002046.3	+1	reviewed	p.T294	1.000	68	0%	52	19.2%	8037	22.6%	-	-	-	HMMPfam_Gp_dh_C,superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain
LEPREL2	10536	genome.wustl.edu	37	12	6939163	6939163	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014262.3	+1	validated	p.R213H	0.003	65	0%	26	34.6%	0	-	-	-	-	NULL
FOXJ2	55810	genome.wustl.edu	37	12	8201982	8201982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018416.2	+1	validated	p.A451V	1.000	57	0%	40	37.5%	7	42.8%	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
CLEC1A	51267	genome.wustl.edu	37	12	10226001	10226001	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016511.2	-1	reviewed	p.A185T	1.000	64	0%	72	41.7%	1	0%	benign(0.001)	tolerated(0.58)	neutral(0.005)	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold
DUSP16	80824	genome.wustl.edu	37	12	12629997	12629997	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030640.2	-1	reviewed	p.C590R	0.235	97	0%	48	12.5%	11	0%	possibly_damaging(0.465)	tolerated(0.06)	deleterious(0.476)	NULL
DDX47	51202	genome.wustl.edu	37	12	12980280	12980280	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016355.3	+1	reviewed	p.V403I	1.000	156	0%	149	40.9%	77	40.2%	possibly_damaging(0.865)	tolerated(0.07)	deleterious(0.654)	superfamily_P-loop containing nucleoside triphosphate hydrolases
KIAA1467	57613	genome.wustl.edu	37	12	13224245	13224245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020853.1	+1	validated	p.T480M	0.002	141	0%	83	33.7%	5	20%	benign(0.046)	tolerated(0.1)	neutral(0.289)	NULL
PTPRO	5800	genome.wustl.edu	37	12	15677851	15677851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030667.1	+1	reviewed	p.M665I	1.000	119	0%	128	37.5%	0	-	benign(0.104)	tolerated(0.17)	neutral(0.067)	HMMSmart_SM00060,superfamily_Fibronectin type III
PDE3A	5139	genome.wustl.edu	37	12	20833173	20833173	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000921.3	+1	validated	p.E1132K	1.000	72	0%	72	34.7%	6	66.6%	benign(0.043)	deleterious(0)	neutral(0.447)	NULL
CCDC91	55297	genome.wustl.edu	37	12	28702092	28702092	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018318.3	+1	validated	p.V438I	0.029	65	0%	112	27.7%	12	58.3%	possibly_damaging(0.465)	tolerated(0.66)	neutral(0.155)	NULL
FGD4	121512	genome.wustl.edu	37	12	32777596	32777596	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000381025	+1	known	p.R268*	0.002	17	0%	14	42.9%	0	-	-	-	-	HMMSmart_PH
PKP2	5318	genome.wustl.edu	37	12	32949098	32949098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004572.3	-1	reviewed	p.D812N	0.990	226	0.4%	180	37.2%	21	33.3%	possibly_damaging(0.801)	tolerated(0.66)	neutral(0.304)	HMMSmart_SM00185,superfamily_ARM repeat
KIF21A	55605	genome.wustl.edu	37	12	39703541	39703541	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017641.3	-1	validated	p.V1362A	1.000	107	0%	155	40%	4	75%	probably_damaging(1)	tolerated(0.43)	deleterious(0.513)	superfamily_WD40 repeat-like
NELL2	4753	genome.wustl.edu	37	12	44915950	44915950	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145107.1	-1	reviewed	p.V720I	1.000	94	0%	100	39%	0	-	benign(0.254)	tolerated(0.62)	neutral(0.030)	HMMPfam_VWC,HMMSmart_VWC,PatternScan_EGF_2
FAM113B	91523	genome.wustl.edu	37	12	47630009	47630009	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138371.1	+1	predicted	p.R388H	0.000	151	0%	97	22.7%	4	0%	probably_damaging(0.985)	tolerated(0.56)	neutral(0.439)	NULL
VDR	7421	genome.wustl.edu	37	12	48240127	48240127	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000376.2	-1	reviewed	p.V339I	0.994	30	0%	12	50%	1	100%	benign(0.017)	deleterious(0.02)	neutral(0.384)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
TMEM106C	79022	genome.wustl.edu	37	12	48361002	48361002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001143842.1	+1	validated	p.T205M	0.993	151	0%	137	43.8%	129	44.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1356
PFKM	5213	genome.wustl.edu	37	12	48526828	48526828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000289.5	+1	reviewed	p.L139I	1.000	62	0%	52	38.5%	3	0%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	HMMPfam_PFK,superfamily_Phosphofructokinase
ASB8	140461	genome.wustl.edu	37	12	48543244	48543244	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024095.3	-1	validated	p.V258M	1.000	85	0%	43	44.2%	22	45.4%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_SOCS_box
ASB8	140461	genome.wustl.edu	37	12	48543596	48543596	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024095.3	-1	validated	p.S140	0.507	79	0%	45	51.1%	12	33.3%	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
ADCY6	112	genome.wustl.edu	37	12	49168816	49168816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015270.3	-1	reviewed	p.R668C	1.000	118	0%	63	44.4%	24	58.3%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_DUF1053
ADCY6	112	genome.wustl.edu	37	12	49177198	49177198	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015270.3	-1	reviewed	p.L7P	1.000	46	0%	28	21.4%	4	0%	possibly_damaging(0.496)	deleterious(0.01)	deleterious(0.571)	NULL
FMNL3	91010	genome.wustl.edu	37	12	50042123	50042123	+	Silent	SNP	G	G	A	rs190548710	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175736.4	-1	validated	p.N843	0.964	81	0%	46	41.3%	3	33.3%	-	-	-	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
SMARCD1	6602	genome.wustl.edu	37	12	50484057	50484057	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003076.4	+1	reviewed	p.R303*	1.000	130	0%	104	29.8%	23	13%	-	-	-	HMMPfam_SWIB,superfamily_SWIB/MDM2 domain,HMMSmart_SM00151
KRT85	3891	genome.wustl.edu	37	12	52760899	52760899	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002283.3	-1	reviewed	p.T97	0.009	168	0%	96	44.8%	0	-	-	-	-	NULL
KRT6B	3854	genome.wustl.edu	37	12	52845391	52845391	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005555.3	-1	reviewed	p.R158W	0.423	383	0%	311	25.1%	3	0%	possibly_damaging(0.494)	deleterious(0.03)	deleterious(0.529)	NULL
KRT6B	3854	genome.wustl.edu	37	12	52845620	52845620	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005555.3	-1	reviewed	p.G81	0.000	229	0%	131	19.1%	3	0%	-	-	-	NULL
KRT8	3856	genome.wustl.edu	37	12	53293667	53293667	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002273.3	-1	reviewed	p.S291	0.000	51	0%	27	33.3%	1727	42.6%	-	-	-	superfamily_Prefoldin,HMMPfam_Filament
SOAT2	8435	genome.wustl.edu	37	12	53515135	53515135	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003578.3	+1	reviewed	p.V396M	1.000	144	0%	82	47.6%	0	-	possibly_damaging(0.862)	tolerated(0.06)	deleterious(0.655)	HMMPfam_MBOAT
PPP1R1A	5502	genome.wustl.edu	37	12	54975889	54975889	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006741.3	-1	validated	p.L92M	1.000	139	0%	73	30.1%	35	42.8%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_DARPP-32
ERBB3	2065	genome.wustl.edu	37	12	56487277	56487277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001982.2	+1	reviewed	p.R475W	1.000	114	0%	96	38.5%	14	42.8%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_L domain-like
SMARCC2	6601	genome.wustl.edu	37	12	56558157	56558157	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003075.3	-1	reviewed	p.A1166	1.000	49	0%	34	47.1%	37	29.7%	-	-	-	NULL
ANKRD52	283373	genome.wustl.edu	37	12	56641949	56641949	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173595.3	-1	validated	p.D612	0.938	53	0%	32	31.2%	1	100%	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
ZBTB39	9880	genome.wustl.edu	37	12	57397300	57397300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014830.1	-1	provisional	p.R468W	1.000	45	0%	28	32.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
STAT6	6778	genome.wustl.edu	37	12	57502012	57502012	+	Missense_Mutation	SNP	C	C	T	rs188884452	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003153.4	-1	reviewed	p.R17Q	1.000	72	0%	38	47.4%	20	50%	probably_damaging(0.976)	tolerated(0.19)	neutral(0.467)	HMMPfam_STAT_int,superfamily_Transcription factor STAT-4 N-domain
SHMT2	6472	genome.wustl.edu	37	12	57627675	57627675	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005412.5	+1	reviewed	p.G423S	1.000	112	0%	59	40.7%	121	47.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_SHMT,superfamily_PyrdxlP-dep_Trfase_major
ARHGAP9	64333	genome.wustl.edu	37	12	57870700	57870700	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032496.2	-1	reviewed	p.A306V	0.021	114	0%	63	19%	2	0%	benign(0.4)	tolerated(0.19)	neutral(0.178)	NULL
MBD6	114785	genome.wustl.edu	37	12	57920359	57920359	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052897.3	+1	validated	p.A477	1.000	26	0%	12	33.3%	35	62.8%	-	-	-	NULL
ENSG00000247039	0	genome.wustl.edu	37	12	58014923	58014923	+	RNA	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000501036	-1	known	NULL	0.000	33	0%	11	36.4%	0	-	-	-	-	-
MON2	23041	genome.wustl.edu	37	12	62929491	62929491	+	Splice_Site	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015026.2	+1	validated	e14+2	1.000	99	0%	140	30%	0	-	-	-	-	-
SRGAP1	57522	genome.wustl.edu	37	12	64536136	64536136	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020762.2	+1	validated	p.T981I	1.000	71	0%	52	15.4%	4	0%	benign(0.011)	deleterious(0.04)	neutral(0.349)	NULL
GNS	2799	genome.wustl.edu	37	12	65136988	65136988	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002076.3	-1	reviewed	p.P242H	1.000	130	0%	115	27.8%	36	25%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
PTPRB	5787	genome.wustl.edu	37	12	70983761	70983761	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001109754.1	-1	reviewed	p.R678H	1.000	77	0%	49	44.9%	0	-	benign(0.321)	tolerated(0.45)	neutral(0.113)	superfamily_Fibronectin type III
OTOGL	283310	genome.wustl.edu	37	12	80760409	80760409	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343203.1	+1	model	p.Y2005F	1.000	123	0%	312	45.5%	0	-	possibly_damaging(0.945)	tolerated(0.61)	neutral(0.394)	NULL
SLC6A15	55117	genome.wustl.edu	37	12	85267023	85267023	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182767.4	-1	validated	p.I318V	1.000	156	0%	118	39.8%	0	-	possibly_damaging(0.796)	deleterious(0)	deleterious(0.744)	HMMPfam_SNF
RASSF9	9182	genome.wustl.edu	37	12	86198960	86198960	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005447.3	-1	reviewed	p.Y276	0.958	136	0%	183	16.4%	13	7.6%	-	-	-	NULL
DCN	1634	genome.wustl.edu	37	12	91546957	91546957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001920.3	-1	reviewed	p.P221H	0.876	204	0%	277	32.5%	36	0%	possibly_damaging(0.893)	tolerated(0.1)	deleterious(0.638)	HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
TMCC3	57458	genome.wustl.edu	37	12	94972270	94972270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020698.2	-1	validated	p.T344M	1.000	84	0%	55	45.5%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tmemb_cc2
ENSG00000227825	0	genome.wustl.edu	37	12	98849258	98849258	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000370696	-1	known	p.R214*	0.530	98	0%	99	39.4%	0	-	-	-	-	NULL
NT5DC3	51559	genome.wustl.edu	37	12	104171772	104171772	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000447799	-1	known	p.R68H	0.001	132	0%	74	36.5%	1	100%	-	-	-	HMMPfam_5_nucleotid
APPL2	55198	genome.wustl.edu	37	12	105600920	105600920	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018171.3	-1	validated	p.Q180H	1.000	60	0%	32	43.8%	15	53.3%	probably_damaging(0.996)	tolerated(0.76)	neutral(0.463)	NULL
POLR3B	55703	genome.wustl.edu	37	12	106897896	106897896	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018082.5	+1	validated	p.R1046C	1.000	309	0.3%	337	45.4%	23	47.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RNA_pol_Rpb2_7,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
SART3	9733	genome.wustl.edu	37	12	108920247	108920247	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014706.3	-1	reviewed	p.A667T	0.000	102	0%	68	44.1%	12	50%	unknown(0)	-	-	NULL
SVOP	55530	genome.wustl.edu	37	12	109354798	109354798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000299134	-1	known	p.T95I	1.000	45	0%	40	60%	0	-	benign(0.013)	tolerated(0.59)	neutral(0.005)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
ALKBH2	121642	genome.wustl.edu	37	12	109527945	109527945	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001655.2	-1	validated	p.G116	0.476	95	0%	68	32.4%	35	31.4%	-	-	-	NULL
TRPV4	59341	genome.wustl.edu	37	12	110232161	110232161	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021625.4	-1	reviewed	p.T488	0.353	92	0%	45	55.6%	20	25%	-	-	-	NULL
C12orf76	400073	genome.wustl.edu	37	12	110480187	110480187	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207435.1	-1	predicted	p.A126V	1.000	73	0%	45	46.7%	5	20%	unknown(0)	-	-	NULL
ALDH2	217	genome.wustl.edu	37	12	112227678	112227678	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000690.2	+1	reviewed	p.D164	0.966	121	0%	138	40.6%	111	36.9%	-	-	-	HMMPfam_Aldedh,superfamily_Aldehyde_DH/Histidinol_DH
ERP29	10961	genome.wustl.edu	37	12	112457613	112457613	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006817.3	+1	reviewed	p.Y66	0.982	120	0%	111	33.3%	205	20%	-	-	-	superfamily_Thiordxn-like_fd,HMMPfam_ERp29_N
C12orf51	283450	genome.wustl.edu	37	12	112630871	112630871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001109662.2	-1	validated	p.R2605H	1.000	66	0%	107	37.4%	9	55.5%	probably_damaging(1)	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112669480	112669480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001109662.2	-1	validated	p.A1591T	1.000	63	0%	38	10.5%	5	20%	probably_damaging(0.98)	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112702994	112702994	+	Silent	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000311694	-1	known	p.S331C	1.000	115	0%	269	40.9%	0	-	-	-	-	NULL
DDX54	79039	genome.wustl.edu	37	12	113618785	113618785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001111322.1	-1	reviewed	p.V85M	1.000	102	0%	54	48.1%	10	60%	-	-	-	NULL
CIT	11113	genome.wustl.edu	37	12	120171983	120171983	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007174.1	-1	validated	p.T1070	0.067	152	0%	90	40%	4	0%	-	-	-	NULL
CCDC64	92558	genome.wustl.edu	37	12	120530859	120530859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_207311.2	+1	validated	p.R539Q	0.999	49	0%	23	30.4%	11	63.6%	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
GCN1L1	10985	genome.wustl.edu	37	12	120568532	120568532	+	Missense_Mutation	SNP	C	C	T	rs145712872	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006836.1	-1	validated	p.R2530Q	1.000	59	0%	44	29.5%	68	48.5%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	superfamily_ARM repeat
RPLP0	6175	genome.wustl.edu	37	12	120638562	120638562	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001002.3	-1	reviewed	p.W9R	1.000	51	0%	25	36%	649	39.7%	benign(0.319)	tolerated(0.41)	neutral(0.115)	HMMPfam_Ribosomal_L10
DYNLL1	8655	genome.wustl.edu	37	12	120934294	120934294	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001037494.1	+1	reviewed	p.C24R	1.000	51	0%	38	26.3%	1342	49.4%	benign(0)	tolerated(0.09)	neutral(0.296)	HMMPfam_Dynein_light,superfamily_DLC
ORAI1	84876	genome.wustl.edu	37	12	122079406	122079406	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032790.3	+1	reviewed	p.V255I	1.000	67	0%	20	45%	75	36%	possibly_damaging(0.744)	tolerated(1)	neutral(0.273)	HMMPfam_DUF1650
KNTC1	9735	genome.wustl.edu	37	12	123060104	123060104	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014708.4	+1	reviewed	p.A799	0.864	152	0%	108	38%	5	20%	-	-	-	NULL
HIP1R	9026	genome.wustl.edu	37	12	123340696	123340696	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003959.1	+1	validated	p.R433H	0.248	51	0%	17	35.3%	32	43.7%	possibly_damaging(0.771)	tolerated(0.52)	neutral(0.295)	NULL
ABCB9	23457	genome.wustl.edu	37	12	123444460	123444460	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019625.3	-1	reviewed	p.R108H	1.000	26	0%	14	50%	5	80%	probably_damaging(0.995)	tolerated(0.05)	deleterious(0.803)	NULL
OGFOD2	79676	genome.wustl.edu	37	12	123461261	123461261	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024623.1	+1	provisional	p.L24I	0.998	62	0%	12	50%	13	61.5%	benign(0.176)	tolerated(0.31)	neutral(0.043)	NULL
SNRNP35	11066	genome.wustl.edu	37	12	123950369	123950369	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_180699.2	+1	reviewed	p.Y99	0.916	92	0%	67	35.8%	40	60%	-	-	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
DHX37	57647	genome.wustl.edu	37	12	125449129	125449129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032656.2	-1	reviewed	p.A619V	1.000	62	0%	46	56.5%	9	22.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
TMEM132C	92293	genome.wustl.edu	37	12	129154049	129154049	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001136103.2	+1	provisional	p.V353M	0.990	86	1.2%	101	39.6%	4	50%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
EP400	57634	genome.wustl.edu	37	12	132490715	132490715	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015409.3	+1	validated	p.S997	0.000	82	0%	55	25.5%	8	75%	-	-	-	superfamily_SSF52540
EP400	57634	genome.wustl.edu	37	12	132528834	132528834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015409.3	+1	validated	p.T2187M	1.000	27	0%	18	38.9%	14	50%	unknown(0)	-	-	NULL
EP400	57634	genome.wustl.edu	37	12	132554090	132554090	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015409.3	+1	validated	p.Y2974	0.980	51	0%	21	61.9%	25	44%	-	-	-	NULL
GALNT9	50614	genome.wustl.edu	37	12	132839192	132839192	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000328957	-1	known	p.A147T	0.082	63	0%	28	46.4%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	superfamily_Nucleotide-diphospho-sugar transferases
POLE	5426	genome.wustl.edu	37	12	133233976	133233976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006231.2	-1	validated	p.A1140T	1.000	87	0%	38	44.7%	11	18.1%	benign(0.002)	tolerated(0.61)	neutral(0.004)	HMMPfam_DNA_pol_B,superfamily_SSF56672
ANKLE2	23141	genome.wustl.edu	37	12	133303854	133303854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015114.1	-1	validated	p.R931C	0.004	34	0%	12	50%	41	31.7%	unknown(0)	deleterious(0)	-	NULL
IFT88	8100	genome.wustl.edu	37	13	21215490	21215490	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175605.3	+1	reviewed	p.H554	0.010	154	0%	122	71.3%	5	100%	-	-	-	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
MTUS2	23281	genome.wustl.edu	37	13	29600832	29600832	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001033602.2	+1	validated	p.G676V	0.969	68	0%	32	18.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SLC7A1	6541	genome.wustl.edu	37	13	30091888	30091888	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003045.4	-1	validated	p.A444	1.000	203	0%	131	11.5%	3	33.3%	-	-	-	NULL
HMGB1	3146	genome.wustl.edu	37	13	31037463	31037463	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002128.4	-1	validated	p.K59	1.000	181	0%	192	16.1%	335	9.2%	-	-	-	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
AKAP11	11215	genome.wustl.edu	37	13	42876607	42876607	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016248.2	+1	reviewed	p.S1242L	0.031	60	0%	42	54.8%	2	100%	benign(0.005)	tolerated(0.83)	neutral(0.001)	NULL
CPB2	1361	genome.wustl.edu	37	13	46656596	46656596	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001872.3	-1	reviewed	p.Q122*	0.675	185	0%	129	63.6%	0	-	-	-	-	superfamily_Zn-dependent exopeptidases
RB1	5925	genome.wustl.edu	37	13	48954198	48954198	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000321.2	+1	reviewed	p.R467*	1.000	8	0.000	24	0.542	1	0%	-	-	-	HMMPfam_RB_A,superfamily_Cyclin-like
LOC121981	121981	genome.wustl.edu	37	13	53394895	53394895	+	RNA	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XR_017783.1	+1	model	NULL	0.999	31	0%	14	64.3%	0	-	-	-	-	-
PCDH17	27253	genome.wustl.edu	37	13	58207485	58207485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001040429.2	+1	reviewed	p.D269N	1.000	22	0.000	7	0.714	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDH9	5101	genome.wustl.edu	37	13	67801808	67801808	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203487.2	-1	reviewed	p.G255	1.000	128	0%	65	56.9%	0	-	-	-	-	superfamily_Cadherin-like
RBM26	64062	genome.wustl.edu	37	13	79943050	79943050	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022118.3	-1	validated	p.S237L	0.999	172	0%	166	58.4%	6	66.6%	benign(0.006)	tolerated(0.06)	neutral(0.323)	NULL
KDELC1	79070	genome.wustl.edu	37	13	103441381	103441381	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024089.2	-1	reviewed	p.A425V	1.000	223	0%	146	70.5%	5	80%	benign(0.168)	deleterious(0.01)	neutral(0.421)	HMMSmart_CAP10,HMMPfam_DUF821
LIG4	3981	genome.wustl.edu	37	13	108862645	108862645	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098268.1	-1	reviewed	p.Q324	0.000	84	0%	66	19.7%	7	14.2%	-	-	-	HMMPfam_DNA_ligase_A_M,superfamily_SSF56091
ING1	3621	genome.wustl.edu	37	13	111371713	111371713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005537.3	+1	reviewed	p.V235M	1.000	36	0%	10	90%	47	95.7%	possibly_damaging(0.871)	deleterious(0)	deleterious(0.783)	NULL
ADPRHL1	113622	genome.wustl.edu	37	13	114083298	114083298	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138430.3	-1	validated	p.E205	0.949	50	0%	17	47.1%	1	100%	-	-	-	HMMPfam_ADP_ribosyl_GH,superfamily_ADP-ribosylglycohydrolase
CDC16	8881	genome.wustl.edu	37	13	115037712	115037712	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001078645.1	+1	reviewed	p.K553E	1.000	46	0%	58	12.1%	66	4.5%	possibly_damaging(0.767)	deleterious(0.04)	deleterious(0.633)	NULL
OR4N2	390429	genome.wustl.edu	37	14	20296476	20296476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004723.1	+1	provisional	p.R290H	0.519	65	0%	45	20%	0	-	benign(0.233)	deleterious(0.01)	neutral(0.429)	superfamily_SSF81321
CHD8	57680	genome.wustl.edu	37	14	21863239	21863239	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020920.3	-1	reviewed	p.P1462L	1.000	70	0%	78	46.2%	24	54.1%	benign(0.382)	deleterious(0.03)	deleterious(0.486)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MMP14	4323	genome.wustl.edu	37	14	23313910	23313910	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004995.2	+1	reviewed	p.R408*	0.997	169	0%	143	38.5%	112	4.4%	-	-	-	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
C14orf93	60686	genome.wustl.edu	37	14	23457182	23457182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130706.1	-1	validated	p.R376H	1.000	126	0%	148	39.2%	22	68.1%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	NULL
MYH7	4625	genome.wustl.edu	37	14	23896866	23896866	+	Missense_Mutation	SNP	C	C	T	rs121913627		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000257.2	-1	reviewed	p.V606M	1.000	147	0%	82	41.5%	0	-	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
TGM1	7051	genome.wustl.edu	37	14	24724444	24724444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000359.2	-1	reviewed	p.R554Q	1.000	82	0%	32	50%	0	-	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	superfamily_SSF54001
RABGGTA	5875	genome.wustl.edu	37	14	24734963	24734963	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004581.3	-1	validated	p.Q521P	0.993	79	0%	47	38.3%	49	22.4%	benign(0.001)	tolerated(0.29)	neutral(0.029)	superfamily_SSF52058
NYNRIN	57523	genome.wustl.edu	37	14	24878570	24878570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025081.2	+1	validated	p.V524M	0.000	47	0%	36	38.9%	1	0%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
CTSG	1511	genome.wustl.edu	37	14	25042968	25042968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001911.2	-1	reviewed	p.V215I	0.992	99	0%	103	36.9%	0	-	benign(0.084)	deleterious(0.01)	neutral(0.412)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
PRKD1	5587	genome.wustl.edu	37	14	30135356	30135356	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002742.2	-1	validated	p.Y154	0.810	137	0%	150	10.7%	1	0%	-	-	-	HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889
LRR1	122769	genome.wustl.edu	37	14	50074337	50074337	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152329.3	+1	reviewed	p.R168*	0.991	93	0%	148	10.8%	5	0%	-	-	-	superfamily_L domain-like
TRIM9	114088	genome.wustl.edu	37	14	51489583	51489583	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015163.5	-1	reviewed	p.R337	0.009	171	0%	118	41.5%	2	100%	-	-	-	HMMSmart_SM00502
NID2	22795	genome.wustl.edu	37	14	52495455	52495455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007361.3	-1	validated	p.R839W	0.076	75	0%	88	38.6%	0	-	probably_damaging(0.985)	deleterious(0.02)	deleterious(0.815)	HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
DACT1	51339	genome.wustl.edu	37	14	59113157	59113157	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016651.5	+1	validated	p.R606W	0.265	30	0%	22	27.3%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DACT1	51339	genome.wustl.edu	37	14	59113772	59113772	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016651.5	+1	validated	p.K811E	1.000	148	0%	163	31.3%	1	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
JKAMP	51528	genome.wustl.edu	37	14	59967913	59967913	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016475.3	+1	validated	p.Y215	1.000	374	0%	622	38.6%	22	36.3%	-	-	-	HMMPfam_DUF766
PIGH	5283	genome.wustl.edu	37	14	68059436	68059436	+	Splice_Site	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004569.3	-1	reviewed	e3-1	1.000	136	0%	167	10.8%	2	50%	-	-	-	-
PAPLN	89932	genome.wustl.edu	37	14	73732131	73732131	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173462.3	+1	validated	p.R1033Q	0.664	30	0%	16	31.2%	3	66.6%	benign(0.272)	tolerated(0.51)	neutral(0.038)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
HEATR4	399671	genome.wustl.edu	37	14	73945407	73945407	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203309.1	-1	provisional	p.S948	0.000	132	0%	170	35.9%	0	-	-	-	-	NULL
HEATR4	399671	genome.wustl.edu	37	14	73978785	73978785	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203309.1	-1	provisional	p.R448W	0.554	217	0%	147	43.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
C14orf43	91748	genome.wustl.edu	37	14	74203773	74203773	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001043318.1	-1	validated	p.A559	0.000	93	0%	50	24%	6	0%	-	-	-	NULL
LTBP2	4053	genome.wustl.edu	37	14	74995342	74995342	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000428.2	-1	reviewed	p.R738C	1.000	36	0%	12	33.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_TB module/8-cys domain
KIAA0317	9870	genome.wustl.edu	37	14	75137544	75137544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039479.1	-1	validated	p.W510L	1.000	116	0%	120	38.3%	8	75%	possibly_damaging(0.812)	deleterious(0.05)	deleterious(0.651)	HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
YLPM1	56252	genome.wustl.edu	37	14	75265410	75265410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019589.2	+1	validated	p.R1137Q	0.000	89	0%	54	40.7%	12	41.6%	benign(0.002)	tolerated(0.39)	neutral(0.016)	NULL
RPS6KL1	83694	genome.wustl.edu	37	14	75388007	75388007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031464.3	-1	validated	p.V80M	0.999	78	0%	41	36.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_MIT,HMMSmart_MIT
ANGEL1	23357	genome.wustl.edu	37	14	77274437	77274437	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015305.3	-1	validated	p.L235P	1.000	88	0%	46	34.8%	2	50%	benign(0.109)	tolerated(0.23)	neutral(0.050)	NULL
KIAA1737	85457	genome.wustl.edu	37	14	77580248	77580248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033426.2	+1	validated	p.A263T	0.504	79	0%	55	25.5%	10	60%	possibly_damaging(0.786)	tolerated(0.28)	neutral(0.326)	NULL
POMT2	29954	genome.wustl.edu	37	14	77769269	77769269	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013382.5	-1	reviewed	p.L189	0.985	105	0%	77	40.3%	9	55.5%	-	-	-	HMMPfam_PMT
GSTZ1	2954	genome.wustl.edu	37	14	77794296	77794296	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145870.2	+1	reviewed	p.P86	0.000	68	0%	48	18.8%	13	0%	-	-	-	superfamily_Thioredoxin-like
GALC	2581	genome.wustl.edu	37	14	88450795	88450795	+	Silent	SNP	G	G	A	rs181066089	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000153.2	-1	reviewed	p.V175	0.991	89	0%	80	41.2%	4	50%	-	-	-	HMMPfam_Glyco_hydro_59,superfamily_(Trans)glycosidases
RPS6KA5	9252	genome.wustl.edu	37	14	91356876	91356876	+	Silent	SNP	G	G	A	rs139792854	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004755.2	-1	validated	p.N597	0.000	93	0%	104	35.6%	3	33.3%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
CPSF2	53981	genome.wustl.edu	37	14	92625382	92625382	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017437.1	+1	validated	p.A626V	1.000	187	0%	292	37%	19	57.8%	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
ASB2	51676	genome.wustl.edu	37	14	94417515	94417515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016150.3	-1	reviewed	p.R189H	0.995	91	0%	34	52.9%	0	-	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
EVL	51466	genome.wustl.edu	37	14	100563838	100563838	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016337.2	+1	validated	p.I67	1.000	123	0%	110	41.8%	34	44.1%	-	-	-	HMMPfam_WH1,HMMSmart_WH1,superfamily_SSF50729
DLK1	8788	genome.wustl.edu	37	14	101201221	101201221	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003836.5	+1	reviewed	p.D380	0.000	49	0%	28	35.7%	0	-	-	-	-	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102463379	102463379	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001376.4	+1	reviewed	p.R1191H	1.000	66	0%	46	34.8%	6	66.6%	benign(0.058)	deleterious(0.02)	neutral(0.387)	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102477092	102477092	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001376.4	+1	reviewed	p.V2141I	1.000	53	0%	53	30.2%	19	36.8%	benign(0.009)	tolerated(0.44)	neutral(0.013)	superfamily_SSF52540
DYNC1H1	1778	genome.wustl.edu	37	14	102515904	102515904	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001376.4	+1	reviewed	p.G4500	0.422	88	0%	25	44%	367	44.1%	-	-	-	HMMPfam_Dynein_heavy
TECPR2	9895	genome.wustl.edu	37	14	102880980	102880980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014844.3	+1	validated	p.C163Y	1.000	108	0%	122	45.1%	1	0%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	superfamily_WD40_like
CDC42BPB	9578	genome.wustl.edu	37	14	103410637	103410637	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006035.3	-1	reviewed	p.T1333	0.000	70	0%	40	37.5%	53	28.3%	-	-	-	HMMPfam_CNH,HMMSmart_CNH
ASPG	374569	genome.wustl.edu	37	14	104559028	104559028	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080464.1	+1	provisional	p.D47	0.090	35	0%	13	46.2%	0	-	-	-	-	HMMPfam_Asparaginase,superfamily_Glutaminase/Asparaginase
AHNAK2	113146	genome.wustl.edu	37	14	105415167	105415167	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138420.2	-1	validated	p.S2207	0.000	211	0%	152	36.2%	0	-	-	-	-	NULL
BRF1	2972	genome.wustl.edu	37	14	105683938	105683938	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001519.2	-1	reviewed	p.R572Q	0.979	66	0%	30	23.3%	32	31.2%	probably_damaging(0.999)	tolerated(0.56)	deleterious(0.497)	NULL
BRF1	2972	genome.wustl.edu	37	14	105693076	105693076	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001519.2	-1	reviewed	p.T270	0.074	76	0%	66	40.9%	13	38.4%	-	-	-	superfamily_Cyclin-like
PACS2	23241	genome.wustl.edu	37	14	105856326	105856326	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001100913.1	+1	validated	p.I677V	1.000	206	0%	158	41.8%	45	42.2%	benign(0.002)	tolerated(0.9)	-	HMMPfam_Pacs-1
MTA1	9112	genome.wustl.edu	37	14	105933070	105933070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004689.3	+1	reviewed	p.P602S	1.000	34	0%	23	21.7%	72	38.8%	benign(0.031)	deleterious(0.03)	neutral(0.366)	NULL
IGHG4	3503	genome.wustl.edu	37	14	106092171	106092171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000390543	-1	known	p.T78M	0.000	473	0%	348	28.4%	113	0.8%	probably_damaging(0.962)	deleterious(0.01)	deleterious(0.810)	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726
IGHM	3507	genome.wustl.edu	37	14	106320670	106320670	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000390558	-1	known	p.A376V	0.000	59	0%	28	17.9%	862	0.1%	-	-	-	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin
HERC2	8924	genome.wustl.edu	37	15	28356990	28356990	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004667.4	-1	reviewed	p.D4808	0.417	179	0%	88	34.1%	62	38.7%	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28447622	28447622	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004667.4	-1	reviewed	p.R2451C	1.000	52	0%	23	34.8%	2	0%	benign(0.061)	deleterious(0.02)	neutral(0.387)	NULL
HERC2	8924	genome.wustl.edu	37	15	28491985	28491985	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004667.4	-1	reviewed	p.T1098	0.114	56	0%	55	47.3%	0	-	-	-	-	NULL
TJP1	7082	genome.wustl.edu	37	15	30000833	30000833	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003257.3	-1	validated	p.S1594P	1.000	160	0%	234	37.2%	36	44.4%	benign(0.313)	deleterious(0)	deleterious(0.542)	NULL
ENSG00000215302	0	genome.wustl.edu	37	15	30771224	30771224	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000399971	+1	known	p.T11I	1.000	50	0%	74	14.9%	1	0%	-	-	-	NULL
C15orf55	256646	genome.wustl.edu	37	15	34646692	34646692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175741.1	+1	validated	p.R346Q	1.000	144	0%	156	39.7%	0	-	probably_damaging(1)	tolerated(0.22)	deleterious(0.542)	NULL
AQR	9716	genome.wustl.edu	37	15	35198874	35198874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014691.2	-1	validated	p.R568H	1.000	159	0%	215	33.5%	8	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
AQR	9716	genome.wustl.edu	37	15	35212575	35212575	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014691.2	-1	validated	p.N393	0.991	143	0%	261	34.9%	1	100%	-	-	-	NULL
FSIP1	161835	genome.wustl.edu	37	15	39910156	39910156	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152597.4	-1	validated	p.M493I	0.000	214	0.5%	241	43.2%	0	-	benign(0.235)	deleterious(0)	neutral(0.468)	NULL
DISP2	85455	genome.wustl.edu	37	15	40657441	40657441	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033510.1	+1	reviewed	p.D271	0.836	41	0%	29	55.2%	0	-	-	-	-	NULL
BAHD1	22893	genome.wustl.edu	37	15	40750789	40750789	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014952.3	+1	validated	p.P42	0.136	39	0%	28	35.7%	8	25%	-	-	-	NULL
DNAJC17	55192	genome.wustl.edu	37	15	41065955	41065955	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018163.2	-1	validated	p.A254	0.000	42	0%	24	41.7%	52	34.6%	-	-	-	NULL
NDUFAF1	51103	genome.wustl.edu	37	15	41680690	41680690	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016013.2	-1	validated	p.R264*	0.996	53	0%	80	12.5%	34	5.8%	-	-	-	HMMPfam_CIA30
MGA	23269	genome.wustl.edu	37	15	42003059	42003059	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080541.2	+1	validated	p.R866*	0.923	151	0%	184	45.1%	2	50%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42058859	42058859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080541.2	+1	validated	p.R2909Q	0.314	75	0%	74	40.5%	4	50%	benign(0.124)	tolerated(0.91)	neutral(0.010)	NULL
JMJD7-PLA2G4B	8681	genome.wustl.edu	37	15	42132762	42132762	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005090.3	+1	validated	p.T272	0.967	65	0%	32	40.6%	12	16.6%	-	-	-	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00558,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SPTBN5	51332	genome.wustl.edu	37	15	42158671	42158671	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016642.2	-1	validated	p.A2132	0.610	49	0%	32	12.5%	0	-	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
PLA2G4F	255189	genome.wustl.edu	37	15	42434214	42434214	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_213600.3	-1	validated	p.R840W	0.041	70	0%	28	35.7%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_FabD/lysophospholipase-like
HAUS2	55142	genome.wustl.edu	37	15	42858878	42858878	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018097.2	+1	validated	p.R191H	0.994	108	0%	185	42.7%	13	38.4%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
TMEM62	80021	genome.wustl.edu	37	15	43452973	43452973	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024956.3	+1	provisional	p.R426H	1.000	207	0%	334	12.6%	13	0%	possibly_damaging(0.598)	deleterious(0.01)	deleterious(0.613)	NULL
DUOX1	53905	genome.wustl.edu	37	15	45440614	45440614	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017434.3	+1	reviewed	p.S929	0.452	143	0%	88	34.1%	32	21.8%	-	-	-	superfamily_EF-hand
SLC24A5	283652	genome.wustl.edu	37	15	48413290	48413290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_205850.2	+1	reviewed	p.G17S	0.002	102	0%	58	36.2%	0	-	benign(0.003)	tolerated(0.06)	neutral(0.323)	NULL
SECISBP2L	9728	genome.wustl.edu	37	15	49320863	49320863	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014701.2	-1	provisional	p.I227	0.731	142	0%	130	43.1%	2	50%	-	-	-	NULL
C15orf33	196951	genome.wustl.edu	37	15	49800506	49800506	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152647.2	-1	validated	p.L305P	0.427	254	0%	560	40.7%	1	100%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
TRPM7	54822	genome.wustl.edu	37	15	50929677	50929677	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017672.4	-1	reviewed	p.A258	1.000	130	0%	161	28.6%	2	50%	-	-	-	NULL
WDR72	256764	genome.wustl.edu	37	15	54008802	54008802	+	Splice_Site	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182758.2	-1	validated	e3+2	1.000	206	0%	144	43.1%	0	-	-	-	-	-
UNC13C	440279	genome.wustl.edu	37	15	54306109	54306109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080534.1	+1	provisional	p.V337M	0.991	89	0%	138	40.6%	0	-	possibly_damaging(0.437)	deleterious(0)	deleterious(0.587)	NULL
NEDD4	4734	genome.wustl.edu	37	15	56142856	56142856	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198400.2	-1	validated	p.Q758*	0.038	140	0%	153	11.1%	1	0%	-	-	-	NULL
HSP90AB4P	664618	genome.wustl.edu	37	15	58984641	58984641	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000380522	-1	known	p.S228	0.977	15	0%	68	32.4%	1	0%	-	-	-	HMMPfam_HSP90
RNF111	54778	genome.wustl.edu	37	15	59373219	59373219	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017610.6	+1	reviewed	p.P678L	0.989	373	0.5%	355	42%	8	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RORA	6095	genome.wustl.edu	37	15	60850430	60850430	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_134260.2	-1	reviewed	p.G71	1.000	75	0%	88	31.8%	0	-	-	-	-	NULL
TLN2	83660	genome.wustl.edu	37	15	63054637	63054637	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015059.2	+1	reviewed	p.L1649P	1.000	157	0%	93	35.5%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HERC1	8925	genome.wustl.edu	37	15	63972916	63972916	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003922.3	-1	reviewed	p.W2095*	1.000	201	0%	203	22.2%	4	50%	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
IGDCC4	57722	genome.wustl.edu	37	15	65676468	65676468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020962.1	-1	provisional	p.P1211L	0.000	40	0%	15	33.3%	1	0%	benign(0.178)	deleterious(0)	neutral(0.461)	NULL
SMAD3	4088	genome.wustl.edu	37	15	67477141	67477141	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005902.3	+1	reviewed	p.Q316	1.000	133	0%	87	40.2%	23	30.4%	-	-	-	HMMPfam_MH2,HMMSmart_SM00524,superfamily_SMAD/FHA domain
SKOR1	390598	genome.wustl.edu	37	15	68118409	68118409	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001031807.1	+1	provisional	p.S72	0.997	43	0%	18	44.4%	1	0%	-	-	-	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind
MYO9A	4649	genome.wustl.edu	37	15	72189995	72189995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006901.2	-1	validated	p.V1617I	0.000	217	0%	241	38.6%	2	50%	benign(0.008)	tolerated(0.43)	neutral(0.013)	NULL
CYP1A1	1543	genome.wustl.edu	37	15	75015038	75015038	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000499.3	-1	reviewed	p.R134H	0.998	25	0%	17	29.4%	0	-	probably_damaging(0.999)	tolerated(0.47)	deleterious(0.501)	HMMPfam_p450,superfamily_Cytochrome P450
CYP1A2	1544	genome.wustl.edu	37	15	75042488	75042488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000761.3	+1	reviewed	p.R137W	0.690	58	0%	26	38.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
COMMD4	54939	genome.wustl.edu	37	15	75631414	75631414	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017828.3	+1	validated	p.S90	1.000	81	0%	43	18.6%	154	33.7%	-	-	-	HMMPfam_HCaRG
SIN3A	25942	genome.wustl.edu	37	15	75684745	75684745	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145357.1	-1	reviewed	p.R897*	1.000	305	0%	299	46.5%	7	28.5%	-	-	-	NULL
PSTPIP1	9051	genome.wustl.edu	37	15	77317660	77317660	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003978.3	+1	reviewed	e4+1	1.000	196	0%	128	13.3%	0	-	-	-	-	-
SGK269	79834	genome.wustl.edu	37	15	77425652	77425652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024776.2	-1	validated	p.R1258C	0.997	145	0%	125	44%	3	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
IDH3A	3419	genome.wustl.edu	37	15	78454689	78454689	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005530.2	+1	reviewed	p.A197	0.244	80	0%	45	35.6%	16	50%	-	-	-	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like
RASGRF1	5923	genome.wustl.edu	37	15	79282566	79282566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002891.4	-1	reviewed	p.P1077T	1.000	235	0%	291	41.6%	2	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
TMC3	342125	genome.wustl.edu	37	15	81664945	81664945	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080532.1	-1	provisional	p.L75V	1.000	170	0%	156	41%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
WHAMM	123720	genome.wustl.edu	37	15	83485473	83485473	+	Silent	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080435.1	+1	provisional	p.P271	0.825	121	0%	154	39.6%	12	33.3%	-	-	-	NULL
ALPK3	57538	genome.wustl.edu	37	15	85406808	85406808	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020778.4	+1	validated	p.R1681Q	0.964	90	0%	83	36.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like)
AKAP13	11214	genome.wustl.edu	37	15	86270435	86270435	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006738.4	+1	reviewed	p.R2325*	0.998	76	0%	100	30%	8	25%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
KIF7	374654	genome.wustl.edu	37	15	90189143	90189143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198525.2	-1	validated	p.R635W	0.101	107	0%	61	37.7%	2	50%	benign(0.174)	deleterious(0.01)	neutral(0.422)	NULL
BLM	641	genome.wustl.edu	37	15	91306240	91306240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000057.2	+1	reviewed	p.R643C	0.633	97	0%	185	39.5%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_SSF52540
MAN2A2	4122	genome.wustl.edu	37	15	91456175	91456175	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000431652	+1	known	p.R846H	0.000	197	0.5%	116	40.5%	21	33.3%	-	-	-	superfamily_Galactose mutarotase-like,HMMPfam_Glyco_hydro_38C
SLCO3A1	28232	genome.wustl.edu	37	15	92706125	92706125	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013272.3	+1	validated	p.I631	0.994	91	0%	58	31%	2	0%	-	-	-	superfamily_MFS general substrate transporter
CHSY1	22856	genome.wustl.edu	37	15	101718804	101718804	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000254190	-1	known	p.A400T	0.976	103	0%	62	41.9%	12	33.3%	benign(0.003)	tolerated(0.34)	neutral(0.023)	HMMPfam_CHGN
TARSL2	123283	genome.wustl.edu	37	15	102252083	102252083	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152334.2	-1	validated	p.R271I	1.000	85	0%	82	31.7%	2	0%	benign(0.125)	deleterious(0.05)	neutral(0.356)	superfamily_ThrRS/AlaRS common domain
LOC100129478	100129478	genome.wustl.edu	37	16	281177	281177	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001719774.2	+1	model	p.P15	0.067	47	0%	29	27.6%	1	0%	-	-	-	NULL
AXIN1	8312	genome.wustl.edu	37	16	396844	396844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003502.2	-1	reviewed	p.P61L	1.000	81	0%	40	45%	16	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MRPL28	10573	genome.wustl.edu	37	16	419091	419091	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006428.3	-1	reviewed	p.G140R	1.000	129	0%	76	36.8%	71	35.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P53_like_DNA_bnd
WDR90	197335	genome.wustl.edu	37	16	708904	708904	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145294.4	+1	provisional	p.I968	0.990	80	0%	30	30%	15	33.3%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
BAIAP3	8938	genome.wustl.edu	37	16	1394519	1394519	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003933.3	+1	reviewed	p.R586Q	0.917	140	0%	51	37.3%	0	-	benign(0.17)	tolerated(0.33)	neutral(0.040)	HMMPfam_DUF1041
TELO2	9894	genome.wustl.edu	37	16	1547439	1547439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016111.3	+1	reviewed	p.R254C	1.000	31	0.000	8	0.625	20	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MAPK8IP3	23162	genome.wustl.edu	37	16	1817646	1817646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015133.3	+1	reviewed	p.R1106C	1.000	26	0.000	9	0.667	45	51.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
CASKIN1	57524	genome.wustl.edu	37	16	2233912	2233912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020764.3	-1	validated	p.A483T	1.000	40	0%	16	62.5%	2	50%	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_SAM_1,HMMSmart_SAM,superfamily_SAM_homology
ABCA3	21	genome.wustl.edu	37	16	2327666	2327666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001089.2	-1	reviewed	p.V1639I	0.450	43	0%	23	65.2%	7	14.2%	benign(0.002)	tolerated(0.21)	neutral(0.044)	NULL
CCNF	899	genome.wustl.edu	37	16	2495557	2495557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001761.2	+1	reviewed	p.R343Q	0.888	47	0%	24	50%	9	33.3%	benign(0.095)	tolerated(0.33)	neutral(0.031)	HMMSmart_CYCLIN,HMMPfam_Cyclin_N,superfamily_Cyclin_like
SRRM2	23524	genome.wustl.edu	37	16	2806558	2806558	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016333.3	+1	validated	p.R65C	1.000	33	0%	14	50%	33	39.3%	unknown(0)	-	-	HMMPfam_cwf21
NAA60	79903	genome.wustl.edu	37	16	3532568	3532568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001083600.1	+1	validated	p.V103I	1.000	78	0%	54	38.9%	37	43.2%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_Acetyltransf_1,superfamily_Acyl_CoA_acyltransferase
ADCY9	115	genome.wustl.edu	37	16	4164999	4164999	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001116.2	-1	reviewed	p.A149T	0.073	60	0%	47	36.2%	12	41.6%	benign(0)	tolerated(0.51)	neutral(0.009)	NULL
ZNF500	26048	genome.wustl.edu	37	16	4802848	4802848	+	Silent	SNP	C	C	T	rs182699514	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021646.1	-1	validated	p.P324	0.025	80	0%	38	42.1%	8	12.5%	-	-	-	superfamily_SSF57667
LOC100132944	100132944	genome.wustl.edu	37	16	8941640	8941640	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001716801.2	-1	model	p.R181C	0.000	42	0%	11	36.4%	26	26.9%	-	-	-	NULL
USP7	7874	genome.wustl.edu	37	16	8995051	8995051	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003470.2	-1	validated	p.T696	0.860	161	0%	201	10.9%	33	27.2%	-	-	-	NULL
CIITA	4261	genome.wustl.edu	37	16	10998611	10998611	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000246.3	+1	reviewed	p.T316	0.000	168	0%	120	36.7%	4	50%	-	-	-	NULL
CIITA	4261	genome.wustl.edu	37	16	11004117	11004117	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000246.3	+1	reviewed	e13+1	1.000	53	0%	47	46.8%	0	-	-	-	-	-
CIITA	4261	genome.wustl.edu	37	16	11016049	11016049	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000246.3	+1	reviewed	p.V1059M	0.000	124	0.8%	74	41.9%	5	0%	possibly_damaging(0.944)	tolerated(0.1)	deleterious(0.675)	HMMSmart_SM00368,superfamily_RNI-like
BFAR	51283	genome.wustl.edu	37	16	14743705	14743705	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016561.2	+1	validated	p.H171	0.030	122	0%	108	35.2%	50	46%	-	-	-	NULL
NOMO1	23420	genome.wustl.edu	37	16	14951455	14951455	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014287.3	+1	reviewed	p.T388M	0.061	553	0%	555	35.1%	37	43.2%	possibly_damaging(0.598)	tolerated(0.1)	deleterious(0.493)	superfamily_Starch-binding domain-like
KIAA0430	9665	genome.wustl.edu	37	16	15706550	15706550	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014647.3	-1	validated	p.S1113N	0.895	130	0%	116	12.1%	13	15.3%	benign(0.081)	tolerated(0.48)	neutral(0.017)	NULL
ABCC6	368	genome.wustl.edu	37	16	16255324	16255324	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001171.5	-1	reviewed	p.V1202M	1.000	48	0%	24	25%	0	-	possibly_damaging(0.887)	deleterious(0.02)	deleterious(0.730)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
NOMO3	408050	genome.wustl.edu	37	16	16345870	16345870	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004067.2	+1	reviewed	p.D262	0.983	395	0%	372	22.6%	21	4.7%	-	-	-	superfamily_Carboxypeptidase regulatory domain
NOMO3	408050	genome.wustl.edu	37	16	16346331	16346331	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004067.2	+1	reviewed	p.A305	1.000	516	0%	610	18%	22	9%	-	-	-	NULL
C16orf62	57020	genome.wustl.edu	37	16	19584516	19584516	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020314.4	+1	predicted	p.R121W	1.000	108	0%	118	39%	8	62.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GPRC5B	51704	genome.wustl.edu	37	16	19873179	19873179	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016235.1	-1	reviewed	p.V383I	1.000	118	0%	90	36.7%	26	34.6%	possibly_damaging(0.793)	tolerated(0.26)	neutral(0.332)	NULL
ACSM2B	348158	genome.wustl.edu	37	16	20570624	20570624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105069.1	-1	validated	p.R108H	0.988	229	0%	139	15.8%	0	-	possibly_damaging(0.824)	tolerated(0.09)	deleterious(0.609)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
DNAH3	55567	genome.wustl.edu	37	16	21110029	21110029	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017539.1	-1	provisional	p.R810C	0.981	185	0%	261	36.4%	0	-	probably_damaging(0.989)	tolerated(0.17)	deleterious(0.498)	NULL
EEF2K	29904	genome.wustl.edu	37	16	22256034	22256034	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013302.3	+1	reviewed	p.E110	0.027	108	0%	48	16.7%	7	0%	-	-	-	superfamily_Kinase_like
POLR3E	55718	genome.wustl.edu	37	16	22337236	22337236	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018119.2	+1	validated	p.P501	0.000	38	0%	22	36.4%	14	57.1%	-	-	-	NULL
USP31	57478	genome.wustl.edu	37	16	23091330	23091330	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020718.3	-1	validated	p.Y705H	1.000	116	0%	73	16.4%	8	12.5%	benign(0.382)	tolerated(0.1)	neutral(0.408)	HMMPfam_UCH,superfamily_Cysteine proteinases
ERN2	10595	genome.wustl.edu	37	16	23706594	23706594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033266.3	-1	validated	p.R624H	1.000	57	0%	15	46.7%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CACNG3	10368	genome.wustl.edu	37	16	24268157	24268157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006539.2	+1	reviewed	p.V28M	1.000	261	0%	291	44.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PMP22_Claudin
RBBP6	5930	genome.wustl.edu	37	16	24567769	24567769	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006910.4	+1	reviewed	e7+1	1.000	107	0%	166	44%	10	90%	-	-	-	-
TNRC6A	27327	genome.wustl.edu	37	16	24788506	24788506	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014494.2	+1	reviewed	p.R139Q	1.000	83	0%	79	46.8%	4	25%	possibly_damaging(0.691)	deleterious(0)	deleterious(0.692)	NULL
CLN3	1201	genome.wustl.edu	37	16	28502865	28502865	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000086.2	-1	reviewed	p.P21	0.000	35	2.9%	24	37.5%	26	53.8%	-	-	-	superfamily_MFS general substrate transporter
CCDC101	112869	genome.wustl.edu	37	16	28602114	28602114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138414.2	+1	validated	p.R208H	0.314	68	0%	44	36.4%	36	41.6%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_DUF1325
TUFM	7284	genome.wustl.edu	37	16	28856095	28856095	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003321.4	-1	reviewed	p.R203L	1.000	252	0%	162	44.4%	227	43.6%	probably_damaging(0.967)	deleterious(0.01)	deleterious(0.815)	HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases
ATP2A1	487	genome.wustl.edu	37	16	28895913	28895913	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173201.2	+1	reviewed	p.A161T	1.000	50	0%	24	25%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M
ITGAL	3683	genome.wustl.edu	37	16	30531228	30531228	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002209.2	+1	reviewed	p.Y1093	0.032	93	0%	56	33.9%	5	0%	-	-	-	NULL
SETD1A	9739	genome.wustl.edu	37	16	30976119	30976119	+	Silent	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014712.1	+1	provisional	p.S352	0.107	236	0%	192	37.5%	6	16.6%	-	-	-	NULL
KAT8	84148	genome.wustl.edu	37	16	31131791	31131791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182958.2	+1	validated	p.R140C	1.000	28	0%	23	34.8%	16	56.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ITGAM	3684	genome.wustl.edu	37	16	31338185	31338185	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000632.3	+1	reviewed	p.F879	0.023	192	0%	291	39.2%	0	-	-	-	-	HMMPfam_Integrin_alpha2,superfamily_SSF69179
PHKB	5257	genome.wustl.edu	37	16	47733210	47733210	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000293.2	+1	reviewed	p.A1072V	0.896	191	0%	216	33.3%	85	48.2%	benign(0)	tolerated(0.18)	neutral(0.056)	HMMPfam_PHK_AB
SIAH1	6477	genome.wustl.edu	37	16	48395868	48395868	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001006610.1	-1	reviewed	p.L189I	1.000	177	0%	160	36.9%	40	35%	possibly_damaging(0.471)	tolerated(0.08)	neutral(0.456)	superfamily_Traf_like,HMMPfam_Sina
CYLD	1540	genome.wustl.edu	37	16	50825539	50825539	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015247.2	+1	reviewed	p.V727I	1.000	122	0%	302	39.1%	11	36.3%	benign(0.016)	deleterious(0.04)	neutral(0.349)	HMMPfam_UCH,superfamily_Cysteine proteinases
SALL1	6299	genome.wustl.edu	37	16	51172902	51172902	+	Silent	SNP	G	G	A	rs148808830	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002968.2	-1	reviewed	p.P1077	1.000	161	0.6%	112	40.2%	17	35.2%	-	-	-	NULL
RPGRIP1L	23322	genome.wustl.edu	37	16	53726041	53726041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015272.2	-1	reviewed	p.R156C	1.000	479	0%	704	29.8%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GNAO1	2775	genome.wustl.edu	37	16	56385325	56385325	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020988.2	+1	validated	p.F251	1.000	172	0%	152	42.1%	0	-	-	-	-	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
CPNE2	221184	genome.wustl.edu	37	16	57155032	57155032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152727.4	+1	reviewed	p.G237R	1.000	100	0%	49	49%	147	53.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
CPNE2	221184	genome.wustl.edu	37	16	57171156	57171156	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152727.4	+1	reviewed	p.R422W	0.995	113	0%	39	33.3%	330	44.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_VWA,HMMPfam_Copine,superfamily_SSF53300
GPR114	221188	genome.wustl.edu	37	16	57601914	57601914	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153837.1	+1	provisional	p.Y323C	0.447	88	0%	33	39.4%	1	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_7tm_2
GPR97	222487	genome.wustl.edu	37	16	57710204	57710204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_170776.4	+1	validated	p.S100N	0.981	125	0%	119	44.5%	0	-	benign(0.01)	tolerated(0.34)	neutral(0.024)	NULL
CDH5	1003	genome.wustl.edu	37	16	66426080	66426080	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001795.3	+1	reviewed	p.V337	0.188	115	0%	94	45.7%	13	15.3%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CDH16	1014	genome.wustl.edu	37	16	66947474	66947474	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004062.2	-1	reviewed	p.H275N	1.000	85	0%	65	33.8%	0	-	benign(0)	tolerated(0.44)	neutral(0.013)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PLEKHG4	25894	genome.wustl.edu	37	16	67316195	67316195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001129727.1	+1	reviewed	p.R399Q	0.002	48	0%	11	54.5%	2	50%	benign(0.014)	tolerated(0.38)	neutral(0.018)	NULL
CENPT	80152	genome.wustl.edu	37	16	67867693	67867693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025082.3	-1	validated	p.D24N	0.003	11	0.000	8	0.625	14	42.8%	probably_damaging(0.99)	tolerated(0.08)	deleterious(0.742)	NULL
PSKH1	5681	genome.wustl.edu	37	16	67961448	67961448	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006742.2	+1	validated	p.R393H	1.000	45	0%	16	31.2%	8	50%	benign(0.003)	tolerated(0.13)	neutral(0.253)	NULL
DPEP3	64180	genome.wustl.edu	37	16	68011841	68011841	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022357.3	-1	reviewed	p.E277	1.000	113	0%	57	35.1%	0	-	-	-	-	HMMPfam_Peptidase_M19,superfamily_Metallo-dependent hydrolases
DPEP3	64180	genome.wustl.edu	37	16	68014043	68014043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022357.3	-1	reviewed	p.R106W	0.000	58	0%	24	41.7%	0	-	benign(0.012)	deleterious(0.01)	neutral(0.406)	superfamily_Metallo-dependent hydrolases
FUK	197258	genome.wustl.edu	37	16	70512547	70512547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145059.2	+1	reviewed	p.R975C	0.986	52	0%	18	50%	17	47%	possibly_damaging(0.596)	tolerated(0.07)	deleterious(0.525)	HMMPfam_GHMP_kinases_C,superfamily_GHMP Kinase C-terminal domain
PMFBP1	83449	genome.wustl.edu	37	16	72198801	72198801	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031293.2	-1	validated	p.D9E	1.000	95	0%	56	33.9%	0	-	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	NULL
CLEC18B	497190	genome.wustl.edu	37	16	74446297	74446297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000425714	-1	known	p.V203M	0.000	73	0%	24	20.8%	0	-	unknown(0)	tolerated(0.14)	-	NULL
LOC100132346	100132346	genome.wustl.edu	37	16	74646658	74646658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001726790.2	-1	model	p.A49T	0.987	12	0%	24	25%	0	-	-	-	-	HMMPfam_Cpn10,superfamily_GroES-like
LDHD	197257	genome.wustl.edu	37	16	75148067	75148067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153486.2	-1	reviewed	p.R232H	0.031	35	0%	28	39.3%	0	-	unknown(0)	deleterious(0.03)	-	superfamily_FAD-binding domain
PLCG2	5336	genome.wustl.edu	37	16	81954830	81954830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002661.2	+1	validated	p.V755I	0.998	91	0%	117	34.2%	8	12.5%	benign(0.021)	tolerated(0.26)	neutral(0.035)	superfamily_SH3,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF50729,superfamily_SSF55550
DNAAF1	123872	genome.wustl.edu	37	16	84209746	84209746	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178452.4	+1	reviewed	p.R636*	0.000	51	0%	40	35%	4	25%	-	-	-	NULL
ATP2C2	9914	genome.wustl.edu	37	16	84438776	84438776	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014861.2	+1	validated	p.R85C	1.000	89	0%	62	50%	30	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M
USP10	9100	genome.wustl.edu	37	16	84806270	84806270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005153.2	+1	reviewed	p.V708M	1.000	147	0%	171	10.5%	16	12.5%	possibly_damaging(0.889)	deleterious(0.01)	deleterious(0.755)	HMMPfam_UCH,superfamily_SSF54001
MAP1LC3B	81631	genome.wustl.edu	37	16	87432441	87432441	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022818.4	+1	reviewed	p.R21*	0.929	168	0%	200	27%	54	9.2%	-	-	-	HMMPfam_MAP1_LC3,superfamily_Ubiquitin-like
ZNF469	84627	genome.wustl.edu	37	16	88498258	88498258	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001127464.1	+1	reviewed	p.P1432	0.004	75	1.3%	47	34%	0	-	-	-	-	NULL
ZC3H18	124245	genome.wustl.edu	37	16	88697553	88697553	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000289509	+1	known	p.R729*	1.000	40	0%	30	16.7%	74	6.7%	-	-	-	NULL
PIEZO1	9780	genome.wustl.edu	37	16	88788766	88788766	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000451779	-1	known	p.D1142	0.000	46	2.2%	15	66.7%	19	36.8%	-	-	-	NULL
ZNF778	197320	genome.wustl.edu	37	16	89293467	89293467	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182531.2	+1	validated	p.P229	0.237	65	0%	69	36.2%	5	60%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
C16orf7	9605	genome.wustl.edu	37	16	89785542	89785542	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000261625	-1	known	p.P52H	0.170	108	0%	93	37.6%	2	50%	unknown(0)	-	-	NULL
ZNF276	92822	genome.wustl.edu	37	16	89789731	89789731	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001113525.1	+1	validated	p.A207V	0.938	41	0%	15	26.7%	7	28.5%	unknown(0)	-	-	NULL
TCF25	22980	genome.wustl.edu	37	16	89965240	89965240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014972.2	+1	validated	p.R394Q	0.994	103	0%	62	16.1%	111	17.1%	possibly_damaging(0.525)	tolerated(0.05)	deleterious(0.522)	HMMPfam_DUF654
LOC100288617	100288617	genome.wustl.edu	37	17	1481549	1481549	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343497.1	+1	model	p.S271G	0.399	64	1.6%	33	30.3%	44	43.1%	-	-	-	NULL
PRPF8	10594	genome.wustl.edu	37	17	1560022	1560022	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006445.3	-1	reviewed	p.A1847T	1.000	102	0%	90	43.3%	104	46.1%	possibly_damaging(0.582)	deleterious(0)	deleterious(0.645)	NULL
RPA1	6117	genome.wustl.edu	37	17	1775775	1775775	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002945.3	+1	validated	p.A137T	0.000	47	0%	29	48.3%	22	36.3%	benign(0)	tolerated(0.59)	neutral(0.004)	NULL
SGSM2	9905	genome.wustl.edu	37	17	2265508	2265508	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014853.2	+1	validated	p.T134	0.860	50	0%	35	34.3%	20	70%	-	-	-	HMMPfam_RUN,HMMSmart_RUN
KIAA0664	23277	genome.wustl.edu	37	17	2597492	2597492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015229.3	-1	validated	p.V967M	1.000	134	0%	80	41.2%	55	50.9%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ITGAE	3682	genome.wustl.edu	37	17	3680864	3680864	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002208.4	-1	reviewed	p.L42P	1.000	61	0%	31	48.4%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_SSF69318
C17orf85	55421	genome.wustl.edu	37	17	3719475	3719475	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001114118.1	-1	provisional	p.R467Q	1.000	201	0%	274	42%	37	32.4%	benign(0.139)	deleterious(0.04)	neutral(0.361)	NULL
ATP2A3	489	genome.wustl.edu	37	17	3833681	3833681	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_174953.1	-1	reviewed	p.I886	0.025	97	0%	76	35.5%	78	76.9%	-	-	-	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
ATP2A3	489	genome.wustl.edu	37	17	3850927	3850927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_174953.1	-1	reviewed	p.G285S	1.000	8	0.000	6	0.667	39	56.4%	probably_damaging(0.994)	tolerated(0.07)	deleterious(0.771)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
MYBBP1A	10514	genome.wustl.edu	37	17	4455262	4455262	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105538.1	-1	validated	p.A312	0.995	65	0%	23	43.5%	22	59%	-	-	-	HMMPfam_DNA_pol_phi,superfamily_ARM-type_fold
SMTNL2	342527	genome.wustl.edu	37	17	4496467	4496467	+	Splice_Site	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001114974.1	+1	validated	e3+1	0.999	53	0%	17	41.2%	0	-	-	-	-	-
DLG4	1742	genome.wustl.edu	37	17	7100327	7100327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001365.3	-1	reviewed	p.L321M	1.000	61	0%	28	53.6%	10	40%	possibly_damaging(0.918)	tolerated(0.2)	neutral(0.417)	HMMPfam_PDZ_assoc
PLSCR3	57048	genome.wustl.edu	37	17	7296826	7296826	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020360.2	-1	provisional	p.I82	1.000	82	0%	86	44.2%	17	41.1%	-	-	-	HMMPfam_Scramblase
KDM6B	23135	genome.wustl.edu	37	17	7755570	7755570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080424.1	+1	provisional	p.V1462M	1.000	127	0%	93	34.4%	45	42.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00558,HMMPfam_JmjC
CHD3	1107	genome.wustl.edu	37	17	7797535	7797535	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001005271.2	+1	reviewed	p.R402C	0.966	76	0%	68	45.6%	36	41.6%	probably_damaging(0.999)	-	-	NULL
CHD3	1107	genome.wustl.edu	37	17	7802419	7802419	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001005271.2	+1	reviewed	p.R807C	1.000	72	0%	46	45.7%	47	38.2%	possibly_damaging(0.945)	-	-	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
NDEL1	81565	genome.wustl.edu	37	17	8349093	8349093	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030808.3	+1	reviewed	p.L51	1.000	156	0%	206	15.5%	21	4.7%	-	-	-	NULL
MYH10	4628	genome.wustl.edu	37	17	8383800	8383800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005964.1	-1	validated	p.A1739T	1.000	94	0%	43	46.5%	22	50%	benign(0.008)	tolerated(0.22)	neutral(0.042)	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
MYH10	4628	genome.wustl.edu	37	17	8448828	8448828	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005964.1	-1	validated	p.T447A	1.000	119	0%	140	36.4%	3	0%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
USP43	124739	genome.wustl.edu	37	17	9604628	9604628	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000436020	+1	known	p.R53H	0.000	56	0%	23	39.1%	0	-	-	-	-	NULL
PIRT	644139	genome.wustl.edu	37	17	10728776	10728776	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001101387.1	-1	validated	p.G63S	0.331	123	0%	71	38%	0	-	benign(0.004)	tolerated(0.2)	neutral(0.049)	NULL
MAP2K4	6416	genome.wustl.edu	37	17	11984691	11984691	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003010.2	+1	reviewed	p.H79	1.000	70	0%	92	27.2%	5	0%	-	-	-	NULL
TEKT3	64518	genome.wustl.edu	37	17	15231347	15231347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031898.2	-1	reviewed	p.D209N	0.999	249	0%	281	28.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tektin
CDRT1	374286	genome.wustl.edu	37	17	15496799	15496799	+	Missense_Mutation	SNP	C	C	T	rs148254995	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006382.3	-1	provisional	p.D620N	0.016	160	0%	141	36.9%	0	-	benign(0.261)	tolerated(0.14)	neutral(0.277)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
TNFRSF13B	23495	genome.wustl.edu	37	17	16875331	16875331	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012452.2	-1	reviewed	p.R20H	0.000	118	0%	69	30.4%	1	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
RAI1	10743	genome.wustl.edu	37	17	17697400	17697400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030665.3	+1	reviewed	p.G380R	0.995	63	0%	38	39.5%	13	30.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DRG2	1819	genome.wustl.edu	37	17	18001619	18001619	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001388.3	+1	reviewed	p.S87	0.997	225	0%	148	43.9%	23	56.5%	-	-	-	HMMPfam_MMR_HSR1,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO15A	51168	genome.wustl.edu	37	17	18030435	18030435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016239.3	+1	reviewed	p.R1330C	1.000	48	0%	37	16.2%	0	-	probably_damaging(1)	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
LLGL1	3996	genome.wustl.edu	37	17	18141458	18141458	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004140.3	+1	reviewed	p.R661H	0.998	74	0%	43	34.9%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SHMT1	6470	genome.wustl.edu	37	17	18250892	18250892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004169.3	-1	reviewed	p.G146V	1.000	125	0%	103	35%	55	52.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SHMT,superfamily_PLP-dependent transferases
ALDH3A1	218	genome.wustl.edu	37	17	19642905	19642905	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000691.4	-1	reviewed	p.C344	0.457	58	0%	39	23.1%	46	36.9%	-	-	-	HMMPfam_Aldedh,superfamily_ALDH-like
SPECC1	92521	genome.wustl.edu	37	17	20135719	20135719	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001033553.1	+1	validated	e6+1	0.000	22	0%	18	50%	32	37.5%	-	-	-	-
CCDC144NL	339184	genome.wustl.edu	37	17	20799092	20799092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004306.1	-1	provisional	p.L81P	0.007	79	0%	48	37.5%	0	-	benign(0.05)	tolerated(0.1)	neutral(0.289)	NULL
WSB1	26118	genome.wustl.edu	37	17	25628876	25628876	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015626.8	+1	reviewed	p.R35C	1.000	342	0.3%	385	35.6%	30	43.3%	benign(0.001)	tolerated(0.11)	neutral(0.272)	superfamily_WD40 repeat-like
KSR1	8844	genome.wustl.edu	37	17	25909854	25909854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014238.1	+1	validated	p.A98T	0.000	48	0%	23	34.8%	1	100%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
SUPT6H	6830	genome.wustl.edu	37	17	27009813	27009813	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003170.3	+1	validated	p.R556W	1.000	56	0%	64	29.7%	34	44.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TLCD1	116238	genome.wustl.edu	37	17	27051602	27051602	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138463.3	-1	validated	p.R224C	1.000	128	0%	111	44.1%	49	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC
C17orf63	55731	genome.wustl.edu	37	17	27086045	27086045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001077498.1	-1	validated	p.S311L	1.000	116	0%	53	28.3%	22	40.9%	benign(0.273)	deleterious(0.03)	neutral(0.394)	NULL
NF1	4763	genome.wustl.edu	37	17	29559121	29559121	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001042492.2	+1	reviewed	p.V1076	0.420	64	0%	87	34.5%	6	33.3%	-	-	-	NULL
NF1	4763	genome.wustl.edu	37	17	29587516	29587516	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001042492.2	+1	reviewed	p.Q1520	1.000	191	0%	249	41%	5	20%	-	-	-	HMMSmart_SM00323,superfamily_GTPase activation domain GAP
NLE1	54475	genome.wustl.edu	37	17	33464163	33464163	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018096.3	-1	validated	p.R229W	0.995	63	0%	26	42.3%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
CCL5	6352	genome.wustl.edu	37	17	34205610	34205610	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002985.2	-1	reviewed	p.Y37C	0.992	212	0.5%	128	46.9%	57	1.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
SYNRG	11276	genome.wustl.edu	37	17	35937659	35937659	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007247.4	-1	reviewed	p.G214	1.000	188	0%	266	40.2%	0	-	-	-	-	NULL
SOCS7	30837	genome.wustl.edu	37	17	36533624	36533624	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014598.1	+1	validated	p.S482C	1.000	149	0%	249	30.9%	1	0%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMSmart_SM00252,superfamily_SH2 domain
ARHGAP23	57636	genome.wustl.edu	37	17	36623439	36623439	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020876.1	+1	provisional	p.P411	0.000	27	0%	18	55.6%	5	40%	-	-	-	NULL
MLLT6	4302	genome.wustl.edu	37	17	36868143	36868143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005937.3	+1	validated	p.G199E	0.040	215	0%	91	45.1%	14	57.1%	benign(0.005)	tolerated(0.31)	neutral(0.027)	NULL
CDC6	990	genome.wustl.edu	37	17	38451609	38451609	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001254.3	+1	reviewed	p.V362A	0.371	162	0%	234	26.1%	18	22.2%	benign(0)	tolerated(0.43)	neutral(0.013)	HMMPfam_AAA,superfamily_SSF52540
CCR7	1236	genome.wustl.edu	37	17	38711130	38711130	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001838.2	-1	reviewed	p.R334H	1.000	130	0%	61	62.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Family A G protein-coupled receptor-like
KRT12	3859	genome.wustl.edu	37	17	39019568	39019568	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000223.3	-1	reviewed	p.E375K	0.999	25	0.000	9	0.556	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Filament
LOC100287618	100287618	genome.wustl.edu	37	17	39092876	39092876	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343552.1	+1	model	p.D42	0.000	38	0%	17	58.8%	26	34.6%	-	-	-	NULL
KRT39	390792	genome.wustl.edu	37	17	39115079	39115079	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_213656.3	-1	reviewed	p.E417G	0.433	115	0%	72	27.8%	0	-	possibly_damaging(0.654)	tolerated(0.16)	neutral(0.289)	NULL
KRTAP9-2	83899	genome.wustl.edu	37	17	39383021	39383021	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031961.2	+1	reviewed	p.Q39*	1.000	285	0%	196	25%	0	-	-	-	-	HMMPfam_Keratin_B2
KRT34	3885	genome.wustl.edu	37	17	39538417	39538417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021013.3	-1	reviewed	p.G70S	0.000	127	0%	54	31.5%	0	-	benign(0.002)	tolerated(0.3)	neutral(0.029)	NULL
KRT14	3861	genome.wustl.edu	37	17	39740083	39740083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000526.4	-1	reviewed	p.E286K	0.979	142	0%	99	38.4%	2	0%	possibly_damaging(0.521)	deleterious(0.01)	deleterious(0.581)	superfamily_Prefoldin,HMMPfam_Filament
KRT14	3861	genome.wustl.edu	37	17	39740609	39740609	+	Missense_Mutation	SNP	C	C	T	rs68005964		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000526.4	-1	reviewed	p.R222H	1.000	127	0%	102	37.3%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Filament
KLHL10	317719	genome.wustl.edu	37	17	40004192	40004192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152467.3	+1	validated	p.G487D	1.000	88	0%	73	38.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
KCNH4	23415	genome.wustl.edu	37	17	40328103	40328103	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012285.2	-1	reviewed	p.S266	0.212	29	0%	23	47.8%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
STAT5B	6777	genome.wustl.edu	37	17	40370267	40370267	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012448.3	-1	reviewed	p.G357	0.955	111	0%	62	29%	6	16.6%	-	-	-	superfamily_P53_like_DNA_bnd,HMMPfam_STAT_bind
PTRF	284119	genome.wustl.edu	37	17	40556950	40556950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012232.5	-1	reviewed	p.R310C	1.000	104	0%	56	44.6%	77	36.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
FAM134C	162427	genome.wustl.edu	37	17	40734098	40734098	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178126.3	-1	validated	p.A378	0.173	41	0%	34	50%	16	37.5%	-	-	-	NULL
CNTNAP1	8506	genome.wustl.edu	37	17	40835877	40835877	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003632.2	+1	reviewed	p.R36C	0.905	57	0%	33	18.2%	0	-	probably_damaging(0.994)	tolerated(0.05)	deleterious(0.797)	HMMSmart_FA58C,superfamily_Gal_bind_like
MPP2	4355	genome.wustl.edu	37	17	41957260	41957260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005374.3	-1	reviewed	p.R415C	0.981	69	0%	35	37.1%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
UBTF	7343	genome.wustl.edu	37	17	42289093	42289093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014233.2	-1	validated	p.A310T	1.000	71	0%	40	27.5%	82	46.3%	possibly_damaging(0.435)	tolerated(0.24)	neutral(0.179)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
FZD2	2535	genome.wustl.edu	37	17	42636266	42636266	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001466.2	+1	reviewed	p.V404I	1.000	69	0%	16	50%	13	46.1%	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	HMMPfam_Frizzled
EFTUD2	9343	genome.wustl.edu	37	17	42962638	42962638	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004247.3	-1	validated	p.T112	0.022	232	0%	335	43.9%	19	73.6%	-	-	-	NULL
MAPT	4137	genome.wustl.edu	37	17	44101347	44101347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001123066.3	+1	validated	p.R714H	1.000	38	0%	38	10.5%	0	-	possibly_damaging(0.858)	deleterious(0)	deleterious(0.776)	NULL
LRRC37A2	474170	genome.wustl.edu	37	17	44623637	44623637	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001006607.2	+1	validated	p.M1024V	0.214	493	0%	654	11.5%	6	0%	possibly_damaging(0.94)	deleterious(0.01)	deleterious(0.790)	NULL
ENSG00000249872	0	genome.wustl.edu	37	17	44627893	44627893	+	RNA	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000510581	-1	novel	NULL	0.004	521	0%	1093	12.1%	4	25%	-	-	-	-
SCRN2	90507	genome.wustl.edu	37	17	45915665	45915665	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138355.3	-1	validated	p.A364T	0.158	43	0%	22	27.3%	35	34.2%	benign(0.036)	tolerated(0.59)	neutral(0.006)	NULL
LOC100131693	100131693	genome.wustl.edu	37	17	47502275	47502275	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001726582.1	-1	model	p.V4I	1.000	108	0%	176	44.3%	0	-	-	-	-	HMMPfam_IF4E,superfamily_Translation initiation factor eIF4e
MYCBPAP	84073	genome.wustl.edu	37	17	48602332	48602332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032133.4	+1	validated	p.P620H	0.420	44	0%	15	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ANKFN1	162282	genome.wustl.edu	37	17	54559765	54559765	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153228.2	+1	validated	p.N717D	1.000	172	0%	190	14.7%	0	-	possibly_damaging(0.824)	tolerated(1)	neutral(0.312)	NULL
AKAP1	8165	genome.wustl.edu	37	17	55183077	55183077	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003488.3	+1	reviewed	p.T84	0.000	64	0%	33	39.4%	10	50%	-	-	-	NULL
EPX	8288	genome.wustl.edu	37	17	56277066	56277066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000502.4	+1	reviewed	p.R483H	1.000	186	0%	70	44.3%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_An_peroxidase,superfamily_Peroxidase_super
MPO	4353	genome.wustl.edu	37	17	56356801	56356801	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000340482	-1	known	p.V211I	0.000	42	0%	11	45.5%	0	-	unknown(0)	tolerated(0.39)	-	NULL
BZRAP1	9256	genome.wustl.edu	37	17	56389719	56389719	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004758.2	-1	validated	p.H821	0.000	34	0%	12	50%	2	50%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TEX14	56155	genome.wustl.edu	37	17	56676846	56676846	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198393.2	-1	reviewed	p.F620	0.366	82	0%	81	16%	0	-	-	-	-	NULL
PPM1E	22843	genome.wustl.edu	37	17	56833464	56833464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014906.3	+1	reviewed	p.E36K	0.995	47	0%	17	29.4%	0	-	unknown(0)	deleterious(0)	-	NULL
RPS6KB1	6198	genome.wustl.edu	37	17	58011822	58011822	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003161.2	+1	reviewed	p.G269	1.000	247	0%	242	38.8%	10	30%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CSHL1	1444	genome.wustl.edu	37	17	61988216	61988216	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022579.1	-1	reviewed	p.V27I	0.051	100	0%	60	36.7%	0	-	benign(0.011)	deleterious(0.02)	neutral(0.384)	HMMPfam_Hormone_1,superfamily_4-helical cytokines
SCN4A	6329	genome.wustl.edu	37	17	62019284	62019284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000334.4	-1	reviewed	p.A1453V	0.999	91	0%	85	41.2%	0	-	benign(0.135)	tolerated(0.11)	neutral(0.283)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN4A	6329	genome.wustl.edu	37	17	62045437	62045437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000334.4	-1	reviewed	p.A328T	0.000	232	0%	172	35.5%	0	-	benign(0)	tolerated(0.7)	neutral(0.002)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
C17orf72	92340	genome.wustl.edu	37	17	62078502	62078502	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000425164	+1	known	p.R101Q	0.000	214	0%	141	34%	3	33.3%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
ICAM2	3384	genome.wustl.edu	37	17	62082473	62082473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000873.3	-1	reviewed	p.V108M	0.329	49	0%	42	14.3%	5	0%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_ICAM_N,superfamily_Immunoglobulin
PRKCA	5578	genome.wustl.edu	37	17	64683344	64683344	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002737.2	+1	reviewed	p.I215	1.000	210	0%	239	14.6%	1	0%	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
ENSG00000154251	0	genome.wustl.edu	37	17	66124329	66124329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000284414	-1	known	p.P19L	0.005	84	0%	109	37.6%	67	50.7%	-	-	-	NULL
ABCA9	10350	genome.wustl.edu	37	17	67004274	67004274	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080283.3	-1	reviewed	p.L1084	0.041	68	0%	149	39.6%	0	-	-	-	-	NULL
ABCA9	10350	genome.wustl.edu	37	17	67039671	67039671	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080283.3	-1	reviewed	p.T253	0.001	53	0%	79	40.5%	0	-	-	-	-	NULL
KCNJ2	3759	genome.wustl.edu	37	17	68171552	68171552	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000891.2	+1	reviewed	p.S124	0.518	121	0%	68	47.1%	0	-	-	-	-	HMMPfam_IRK,superfamily_Voltage-gated potassium channels
C17orf80	55028	genome.wustl.edu	37	17	71232543	71232543	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017941.4	+1	validated	p.G308W	0.011	77	0%	83	39.8%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SDK2	54549	genome.wustl.edu	37	17	71361467	71361467	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001144952.1	-1	provisional	p.E1745D	0.983	47	0%	34	32.4%	1	100%	benign(0)	tolerated(1)	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SDK2	54549	genome.wustl.edu	37	17	71420062	71420062	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001144952.1	-1	provisional	p.R585*	1.000	18	0%	10	50%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Fibronectin type III,superfamily_Immunoglobulin
GPRC5C	55890	genome.wustl.edu	37	17	72443156	72443156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022036.2	+1	reviewed	p.V484M	0.181	52	0%	32	40.6%	70	30%	benign(0.174)	deleterious(0)	neutral(0.461)	NULL
FDXR	2232	genome.wustl.edu	37	17	72861891	72861891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004110.3	-1	reviewed	p.V187M	1.000	45	0%	20	50%	52	42.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pyr_redox_2,superfamily_SSF51905,superfamily_SSF51971
CASKIN2	57513	genome.wustl.edu	37	17	73501904	73501904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020753.3	-1	validated	p.R278Q	1.000	118	0%	64	39.1%	11	27.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Ankyrin repeat
LLGL2	3993	genome.wustl.edu	37	17	73567858	73567858	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001031803.1	+1	reviewed	p.E763*	1.000	35	0%	13	30.8%	69	28.9%	-	-	-	NULL
ITGB4	3691	genome.wustl.edu	37	17	73723531	73723531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000213.3	+1	reviewed	p.A70V	0.000	36	0%	21	38.1%	30	60%	benign(0.006)	tolerated(0.36)	neutral(0.020)	HMMPfam_Integrin_beta,HMMSmart_SM00187,HMMSmart_SM00423
EVPL	2125	genome.wustl.edu	37	17	74005000	74005000	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001988.2	-1	validated	p.R1429H	0.165	61	0%	27	37%	2	100%	possibly_damaging(0.922)	tolerated(0.13)	deleterious(0.624)	NULL
SPHK1	8877	genome.wustl.edu	37	17	74383387	74383387	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_182965.2	+1	validated	p.A378V	0.873	102	0%	43	20.9%	33	45.4%	probably_damaging(0.968)	tolerated(0.07)	deleterious(0.729)	NULL
SEPT9	10801	genome.wustl.edu	37	17	75484369	75484369	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001113491.1	+1	reviewed	p.P364S	1.000	84	0%	64	34.4%	290	43.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH17	8632	genome.wustl.edu	37	17	76440722	76440722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000389840	-1	known	p.R3817H	0.985	66	0%	33	51.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynein_heavy
RNF213	57674	genome.wustl.edu	37	17	78298873	78298873	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000508628	+1	known	p.R1023Q	0.000	204	0%	225	36.4%	3	33.3%	benign(0.148)	tolerated(0.62)	neutral(0.017)	NULL
RNF213	57674	genome.wustl.edu	37	17	78319974	78319974	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000508628	+1	known	p.R2613	0.000	85	0%	42	33.3%	3	66.6%	-	-	-	NULL
SLC38A10	124565	genome.wustl.edu	37	17	79234132	79234132	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001037984.1	-1	validated	p.S398	0.028	40	0%	19	36.8%	31	45.1%	-	-	-	NULL
BAHCC1	57597	genome.wustl.edu	37	17	79414527	79414527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000436173	+1	known	p.P1210L	0.002	28	0%	13	46.2%	1	100%	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
NPLOC4	55666	genome.wustl.edu	37	17	79575810	79575810	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017921.2	-1	validated	p.P158	0.020	104	0%	83	34.9%	15	40%	-	-	-	HMMPfam_zf-NPL4
NOTUM	147111	genome.wustl.edu	37	17	79914809	79914809	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178493.5	-1	validated	p.C279	0.171	64	0%	48	47.9%	0	-	-	-	-	HMMPfam_PAE
GPS1	2873	genome.wustl.edu	37	17	80011759	80011759	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_212492.1	+1	reviewed	p.A88T	0.996	38	0%	23	34.8%	76	47.3%	benign(0.052)	tolerated(0.17)	neutral(0.062)	NULL
TBCD	6904	genome.wustl.edu	37	17	80890603	80890603	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005993.4	+1	reviewed	p.T1061	0.000	76	1.3%	50	44%	205	49.7%	-	-	-	superfamily_ARM repeat
LOC441806	441806	genome.wustl.edu	37	18	856775	856775	+	Silent	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002344135.1	+1	model	p.L54	0.998	42	0%	51	31.4%	0	-	-	-	-	HMMPfam_SAC3_GANP
NDC80	10403	genome.wustl.edu	37	18	2610795	2610795	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006101.2	+1	validated	p.R576*	0.995	90	0%	130	41.5%	11	27.2%	-	-	-	NULL
DLGAP1	9229	genome.wustl.edu	37	18	3879898	3879898	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004746.2	-1	provisional	p.C57	0.987	32	0%	16	56.2%	0	-	-	-	-	NULL
SOGA2	23255	genome.wustl.edu	37	18	8720395	8720395	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015210.3	+1	predicted	p.R86	0.095	79	0%	70	38.6%	1	100%	-	-	-	NULL
AFG3L2	10939	genome.wustl.edu	37	18	12344172	12344172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006796.1	-1	reviewed	p.V580I	0.998	90	0%	53	34%	67	61.1%	possibly_damaging(0.492)	tolerated(0.5)	neutral(0.174)	HMMPfam_Peptidase_M41,superfamily_SSF52540
TMEM241	85019	genome.wustl.edu	37	18	20889660	20889660	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032933.4	-1	validated	p.S272G	0.325	160	0%	137	29.9%	5	60%	benign(0.006)	tolerated(0.13)	neutral(0.253)	superfamily_Multidrug resistance efflux transporter EmrE
ZNF521	25925	genome.wustl.edu	37	18	22805887	22805887	+	Silent	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015461.2	-1	validated	p.T665	1.000	66	0%	51	49%	1	0%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CDH2	1000	genome.wustl.edu	37	18	25585947	25585947	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001792.3	-1	reviewed	p.H238R	1.000	124	0%	128	36.7%	4	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
NOL4	8715	genome.wustl.edu	37	18	31803068	31803068	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003787.3	-1	validated	p.N50K	1.000	94	0%	66	43.9%	0	-	benign(0.133)	tolerated(0.51)	neutral(0.020)	NULL
SETBP1	26040	genome.wustl.edu	37	18	42281739	42281739	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015559.2	+1	validated	p.R143H	0.981	25	0%	40	47.5%	1	0%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	NULL
SLC14A1	6563	genome.wustl.edu	37	18	43311041	43311041	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128588.3	+1	reviewed	p.F127	0.888	96	0%	77	35.1%	4	25%	-	-	-	HMMPfam_UT
CTIF	9811	genome.wustl.edu	37	18	46287773	46287773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142397.1	+1	validated	p.V364M	1.000	40	0%	19	31.6%	6	50%	possibly_damaging(0.915)	deleterious(0.01)	deleterious(0.772)	NULL
MYO5B	4645	genome.wustl.edu	37	18	47379828	47379828	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080467.2	-1	reviewed	p.N1404	0.960	101	0%	78	38.5%	33	45.4%	-	-	-	NULL
MEX3C	51320	genome.wustl.edu	37	18	48703613	48703613	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016626.4	-1	reviewed	p.P363L	1.000	103	0%	114	49.1%	11	36.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
FECH	2235	genome.wustl.edu	37	18	55221537	55221537	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001012515.2	-1	reviewed	p.T350	0.199	215	0%	219	35.6%	18	38.8%	-	-	-	HMMPfam_Ferrochelatase,superfamily_Chelatase
SEC11C	90701	genome.wustl.edu	37	18	56819823	56819823	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033280.2	+1	provisional	p.R85W	1.000	138	0%	173	34.1%	206	49.5%	possibly_damaging(0.732)	deleterious(0.01)	deleterious(0.673)	superfamily_LexA/Signal peptidase,HMMPfam_Peptidase_S24
SERPINB12	89777	genome.wustl.edu	37	18	61225619	61225619	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080474.1	+1	provisional	p.S68N	0.000	95	0%	135	33.3%	0	-	benign(0.039)	tolerated(0.6)	neutral(0.006)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
CDH7	1005	genome.wustl.edu	37	18	63525098	63525098	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004361.2	+1	reviewed	p.D428Y	1.000	145	0%	117	47.9%	0	-	probably_damaging(0.992)	deleterious(0.05)	deleterious(0.793)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CDH7	1005	genome.wustl.edu	37	18	63547797	63547797	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004361.2	+1	reviewed	p.N675	0.913	94	0%	115	19.1%	0	-	-	-	-	HMMPfam_Cadherin_C
CDH19	28513	genome.wustl.edu	37	18	64172494	64172494	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021153.2	-1	reviewed	p.I625T	0.916	51	0%	51	51%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	HMMPfam_Cadherin_C
CNDP1	84735	genome.wustl.edu	37	18	72251796	72251796	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032649.5	+1	reviewed	p.*508Q	0.000	222	0%	341	36.4%	0	-	-	-	-	NULL
ZNF236	7776	genome.wustl.edu	37	18	74617269	74617269	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007345.3	+1	validated	p.R730Q	0.744	63	0%	68	45.6%	1	100%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
RBFA	79863	genome.wustl.edu	37	18	77804233	77804233	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024805.2	+1	validated	p.A200T	0.964	274	0%	295	43.1%	44	50%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
ABCA7	10347	genome.wustl.edu	37	19	1045074	1045074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019112.3	+1	reviewed	p.A430V	0.866	45	0%	16	37.5%	12	33.3%	benign(0.023)	tolerated(0.07)	neutral(0.320)	NULL
ATP8B3	148229	genome.wustl.edu	37	19	1808241	1808241	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138813.2	-1	reviewed	p.L166I	1.000	104	0%	62	43.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
AP3D1	8943	genome.wustl.edu	37	19	2129135	2129135	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003938.5	-1	validated	p.R254W	0.696	63	0%	41	12.2%	39	28.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adaptin_N,superfamily_ARM repeat
ZNF57	126295	genome.wustl.edu	37	19	2917527	2917527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173480.2	+1	validated	p.T303M	0.018	107	0%	96	37.5%	5	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_C2H2 and C2HC zinc fingers
TLE2	7089	genome.wustl.edu	37	19	3005537	3005537	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003260.4	-1	validated	p.S598	0.721	119	0%	52	36.5%	83	43.3%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
TLE2	7089	genome.wustl.edu	37	19	3019723	3019723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003260.4	-1	validated	p.V115M	1.000	48	0%	17	29.4%	23	34.7%	benign(0)	tolerated(1)	-	HMMPfam_TLE_N
ENSG00000226800	0	genome.wustl.edu	37	19	3612056	3612056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000447295	+1	known	p.R110W	0.973	90	0%	43	58.1%	24	58.3%	benign(0.001)	tolerated(0.15)	neutral(0.241)	NULL
C19orf29	58509	genome.wustl.edu	37	19	3612132	3612132	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080543.1	-1	validated	p.R689H	1.000	74	0%	36	52.8%	24	29.1%	possibly_damaging(0.93)	tolerated(0.84)	neutral(0.377)	HMMPfam_CactinC_cactus
PIP5K1C	23396	genome.wustl.edu	37	19	3661081	3661081	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012398.1	-1	reviewed	p.S117	0.969	131	0%	97	45.4%	37	35.1%	-	-	-	HMMSmart_PIPKc,superfamily_SSF56104
STAP2	55620	genome.wustl.edu	37	19	4325250	4325250	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017720.2	-1	reviewed	p.P345	0.000	98	0%	72	11.1%	201	4.9%	-	-	-	NULL
SH3GL1	6455	genome.wustl.edu	37	19	4365495	4365495	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003025.2	-1	provisional	p.G105	0.039	74	0%	27	44.4%	64	31.2%	-	-	-	HMMPfam_BAR,HMMSmart_SM00721
HDGFRP2	84717	genome.wustl.edu	37	19	4475475	4475475	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001520.1	+1	reviewed	p.Y61	0.990	81	0%	83	43.4%	57	35%	-	-	-	HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT
DPP9	91039	genome.wustl.edu	37	19	4714260	4714260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_139159.4	-1	reviewed	p.P49L	0.547	22	0%	11	63.6%	8	87.5%	benign(0.007)	tolerated(0.31)	neutral(0.027)	NULL
DUS3L	56931	genome.wustl.edu	37	19	5788368	5788368	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020175.2	-1	validated	p.T314	1.000	51	0%	25	40%	16	0%	-	-	-	HMMPfam_Dus,superfamily_FMN-linked oxidoreductases
KHSRP	8570	genome.wustl.edu	37	19	6416804	6416804	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003685.2	-1	validated	p.G424	0.000	29	0%	20	35%	64	34.3%	-	-	-	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I)
TUBB4A	10382	genome.wustl.edu	37	19	6495338	6495338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006087.2	-1	provisional	p.R391H	1.000	61	0%	44	47.7%	16	0%	probably_damaging(0.99)	-	-	superfamily_Tubulin C-terminal domain-like
VAV1	7409	genome.wustl.edu	37	19	6825376	6825376	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005428.2	+1	reviewed	p.G262	0.004	62	0%	36	44.4%	2	0%	-	-	-	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
PNPLA6	10908	genome.wustl.edu	37	19	7620212	7620212	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006702.4	+1	reviewed	p.T927	0.003	35	0%	20	55%	21	33.3%	-	-	-	superfamily_Acyl_Trfase/lysoPlipase
CAMSAP3	57662	genome.wustl.edu	37	19	7676675	7676675	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080429.2	+1	validated	p.S459	0.042	21	0%	11	36.4%	5	20%	-	-	-	NULL
TIMM44	10469	genome.wustl.edu	37	19	8006005	8006005	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006351.3	-1	validated	p.P41	0.000	93	0%	56	28.6%	8	50%	-	-	-	NULL
ELAVL1	1994	genome.wustl.edu	37	19	8046013	8046013	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001419.2	-1	reviewed	p.A77V	1.000	144	0%	133	29.3%	115	30.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
FBN3	84467	genome.wustl.edu	37	19	8197949	8197949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032447.3	-1	reviewed	p.V545M	0.998	56	0%	19	26.3%	8	12.5%	benign(0.017)	tolerated(1)	neutral(0.001)	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
HNRNPM	4670	genome.wustl.edu	37	19	8528547	8528547	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005968.3	+1	validated	p.G139R	1.000	171	0%	219	42%	193	45.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
MYO1F	4542	genome.wustl.edu	37	19	8604848	8604848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012335.3	-1	validated	p.A559T	0.998	65	0%	40	32.5%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO1F	4542	genome.wustl.edu	37	19	8615468	8615468	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012335.3	-1	validated	p.Y294	0.553	179	0%	117	38.5%	3	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MUC16	94025	genome.wustl.edu	37	19	9018486	9018486	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024690.2	-1	validated	p.R12563H	0.000	358	0%	371	35%	8	25%	benign(0.044)	-	-	HMMPfam_SEA,superfamily_SEA domain
MUC16	94025	genome.wustl.edu	37	19	9087133	9087133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024690.2	-1	validated	p.T1561M	0.100	460	0%	393	43.3%	0	-	unknown(0)	-	-	NULL
LOC100132973	100132973	genome.wustl.edu	37	19	9293164	9293165	+	Splice_Site	INS	-	-	TTTATTTATTTATTTA	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001726567.1	-1	model	e2-1	1.000:1.000	-	-	-	-	-	-	-	-	-	-
KRI1	65095	genome.wustl.edu	37	19	10671868	10671868	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_023008.3	-1	validated	p.R194C	0.987	85	0%	38	39.5%	23	34.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ILF3	3609	genome.wustl.edu	37	19	10794629	10794629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017620.2	+1	reviewed	p.S685L	1.000	240	0%	118	44.1%	191	46.5%	unknown(0)	deleterious(0)	-	NULL
SMARCA4	6597	genome.wustl.edu	37	19	11132542	11132542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128849.1	+1	reviewed	p.E920K	1.000	68	0%	24	29.2%	65	30.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540
SMARCA4	6597	genome.wustl.edu	37	19	11135079	11135079	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001128849.1	+1	reviewed	p.V1016M	1.000	33	0%	25	36%	75	44%	probably_damaging(0.995)	tolerated(0.16)	deleterious(0.517)	HMMPfam_SNF2_N
DOCK6	57572	genome.wustl.edu	37	19	11313258	11313258	+	Splice_Site	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020812.2	-1	validated	e42+2	0.990	59	0%	37	51.4%	1	0%	-	-	-	-
SWSAP1	126074	genome.wustl.edu	37	19	11486417	11486417	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_175871.3	+1	validated	p.V139M	0.699	76	0%	42	28.6%	6	33.3%	probably_damaging(0.96)	deleterious(0.01)	deleterious(0.808)	NULL
RGL3	57139	genome.wustl.edu	37	19	11516069	11516069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001035223.2	-1	validated	p.R344C	0.943	59	0%	51	51%	44	34%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
ZNF440	126070	genome.wustl.edu	37	19	11941167	11941167	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152357.2	+1	validated	p.Q25K	0.676	232	0%	341	46.3%	5	60%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF878	729747	genome.wustl.edu	37	19	12155237	12155237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080404.1	-1	inferred	p.R374C	0.001	134	0%	161	14.9%	0	-	possibly_damaging(0.715)	deleterious(0)	deleterious(0.704)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF490	57474	genome.wustl.edu	37	19	12691496	12691496	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020714.2	-1	validated	p.E465K	0.452	170	0%	184	39.7%	3	66.6%	possibly_damaging(0.702)	tolerated(0.42)	neutral(0.267)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
GCDH	2639	genome.wustl.edu	37	19	13007031	13007031	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000159.2	+1	reviewed	p.S216	0.138	156	0%	100	40%	19	0%	-	-	-	HMMPfam_Acyl-CoA_dh_M,superfamily_Acyl-CoA dehydrogenase NM domain-like
NFIX	4784	genome.wustl.edu	37	19	13136046	13136046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002501.2	+1	validated	p.R80H	1.000	53	0%	19	63.2%	19	36.8%	probably_damaging(0.972)	deleterious(0)	deleterious(0.859)	HMMPfam_MH1,HMMSmart_DWA
TRMT1	55621	genome.wustl.edu	37	19	13218619	13218619	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001136035.2	-1	validated	p.N484	0.984	161	0%	120	33.3%	54	46.2%	-	-	-	HMMPfam_TRM
NOTCH3	4854	genome.wustl.edu	37	19	15289922	15289922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000435.2	-1	reviewed	p.S1211L	0.235	27	0%	16	37.5%	39	53.8%	possibly_damaging(0.747)	deleterious(0)	deleterious(0.719)	HMMSmart_SM00179,HMMSmart_SM00181
OR10H5	284433	genome.wustl.edu	37	19	15905562	15905562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001004466.1	+1	provisional	p.R235Q	0.001	243	0%	163	45.4%	0	-	benign(0.36)	tolerated(0.12)	neutral(0.375)	HMMPfam_7tm_1,superfamily_SSF81321
CPAMD8	27151	genome.wustl.edu	37	19	17122405	17122405	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015692.2	-1	validated	p.R191*	1.000	91	0%	50	46%	4	0%	-	-	-	HMMPfam_A2M_N
ANO8	57719	genome.wustl.edu	37	19	17441667	17441667	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020959.2	-1	validated	p.E321D	0.884	85	0%	44	52.3%	18	16.6%	benign(0.142)	tolerated(0.26)	neutral(0.046)	NULL
SLC27A1	376497	genome.wustl.edu	37	19	17611111	17611111	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198580.1	+1	provisional	p.R411C	1.000	54	0%	32	40.6%	26	42.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_AMP-binding,superfamily_SSF56801
GLT25D1	79709	genome.wustl.edu	37	19	17678282	17678282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024656.2	+1	provisional	p.T186M	1.000	90	0%	66	43.9%	56	33.9%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
UNC13A	23025	genome.wustl.edu	37	19	17769067	17769067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001080421.2	-1	validated	p.D279N	1.000	187	0%	150	47.3%	0	-	probably_damaging(0.976)	tolerated(0.05)	deleterious(0.763)	NULL
SLC5A5	6528	genome.wustl.edu	37	19	17988625	17988625	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000453.2	+1	reviewed	p.A264	0.325	173	0%	109	47.7%	2	100%	-	-	-	NULL
LSM4	25804	genome.wustl.edu	37	19	18420491	18420491	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012321.3	-1	validated	p.R109*	0.990	20	0%	14	28.6%	115	2.6%	-	-	-	superfamily_Sm-like ribonucleoproteins
CRTC1	23373	genome.wustl.edu	37	19	18870863	18870863	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098482.1	+1	validated	p.P253	0.216	70	0%	30	50%	13	69.2%	-	-	-	NULL
ZNF101	94039	genome.wustl.edu	37	19	19790744	19790744	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033204.2	+1	provisional	p.A316T	0.991	65	0%	71	35.2%	15	20%	benign(0.023)	deleterious(0.03)	neutral(0.365)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
TSHZ3	57616	genome.wustl.edu	37	19	31767826	31767826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020856.2	-1	validated	p.R958Q	1.000	103	1%	64	50%	2	50%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
FXYD5	53827	genome.wustl.edu	37	19	35660478	35660478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014164.5	+1	reviewed	p.C166Y	0.465	86	0%	75	13.3%	75	1.3%	possibly_damaging(0.952)	deleterious(0)	deleterious(0.840)	HMMPfam_ATP1G1_PLM_MAT8
CD22	933	genome.wustl.edu	37	19	35836592	35836592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001771.3	+1	validated	p.R766C	0.077	122	0%	81	39.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HAUS5	23354	genome.wustl.edu	37	19	36110955	36110955	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015302.1	+1	validated	p.L483P	1.000	81	0%	34	14.7%	11	0%	benign(0.046)	tolerated(0.08)	neutral(0.302)	NULL
RBM42	79171	genome.wustl.edu	37	19	36128377	36128377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024321.3	+1	provisional	p.R455H	1.000	140	0%	84	42.9%	170	40.5%	unknown(0)	deleterious(0.01)	-	HMMSmart_SM00360,superfamily_RNA-binding domain RBD
MLL4	9757	genome.wustl.edu	37	19	36217157	36217157	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014727.1	+1	reviewed	p.R1302	0.998	85	0%	40	57.5%	8	50%	-	-	-	superfamily_FYVE/PHD zinc finger,HMMPfam_PHD
MLL4	9757	genome.wustl.edu	37	19	36221279	36221279	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014727.1	+1	reviewed	p.R1705*	1.000	258	0%	208	40.4%	20	50%	-	-	-	NULL
COX7A1	1346	genome.wustl.edu	37	19	36642592	36642592	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000437291	-1	known	p.A57V	0.000	47	0%	20	20%	14	7.1%	-	-	-	HMMPfam_COX7a,superfamily_Mitochondrial cytochrome c oxidase subunit VIIa
ZNF565	147929	genome.wustl.edu	37	19	36674278	36674278	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001042474.1	-1	validated	p.C197Y	0.991	149	0%	141	34%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF607	84775	genome.wustl.edu	37	19	38189321	38189321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032689.4	-1	validated	p.R571C	0.007	50	0%	76	36.8%	1	100%	benign(0.149)	tolerated(0.21)	neutral(0.057)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SUPT5H	6829	genome.wustl.edu	37	19	39965175	39965175	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001111020.2	+1	validated	p.P947	0.942	75	0%	31	41.9%	170	50%	-	-	-	NULL
DYRK1B	9149	genome.wustl.edu	37	19	40321075	40321075	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004714.1	-1	reviewed	p.G104	1.000	124	0.8%	103	32%	42	28.5%	-	-	-	superfamily_Protein kinase-like (PK-like)
PSMC4	5704	genome.wustl.edu	37	19	40486241	40486241	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006503.2	+1	reviewed	p.R323W	1.000	166	0%	102	44.1%	184	46.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
CYP2F1	1572	genome.wustl.edu	37	19	41633947	41633947	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000774.3	+1	reviewed	p.N479I	0.222	56	0%	31	48.4%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_p450,superfamily_Cytochrome P450
POU2F2	5452	genome.wustl.edu	37	19	42599759	42599759	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002698.2	-1	validated	p.R282C	1.000	45	0%	26	26.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
MEGF8	1954	genome.wustl.edu	37	19	42858864	42858864	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001410.2	+1	validated	p.A1312V	1.000	62	0%	36	27.8%	2	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
LIPE	3991	genome.wustl.edu	37	19	42930446	42930446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005357.2	-1	reviewed	p.R286W	0.110	163	0%	146	43.8%	2	50%	possibly_damaging(0.938)	deleterious(0)	deleterious(0.828)	NULL
XRCC1	7515	genome.wustl.edu	37	19	44055786	44055786	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006297.2	-1	reviewed	p.R379H	1.000	38	0%	22	18.2%	52	3.8%	probably_damaging(0.978)	tolerated(0.09)	deleterious(0.717)	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
SMG9	56006	genome.wustl.edu	37	19	44254813	44254813	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019108.2	-1	validated	p.G27	0.994	64	0%	29	34.5%	10	30%	-	-	-	NULL
KCNN4	3783	genome.wustl.edu	37	19	44271813	44271813	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002250.2	-1	reviewed	p.H389R	0.014	177	0%	98	13.3%	102	25.4%	probably_damaging(0.991)	tolerated(0.24)	deleterious(0.481)	NULL
ZNF296	162979	genome.wustl.edu	37	19	45575248	45575248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145288.1	-1	provisional	p.P347T	0.026	46	0%	22	31.8%	6	66.6%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
GPR4	2828	genome.wustl.edu	37	19	46094629	46094629	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005282.2	-1	validated	p.T166A	1.000	18	0%	11	45.5%	2	0%	possibly_damaging(0.663)	tolerated(0.65)	neutral(0.237)	HMMPfam_7tm_1,superfamily_SSF81321
PPP5C	5536	genome.wustl.edu	37	19	46878978	46878978	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006247.2	+1	provisional	p.V161M	0.279	52	0%	31	45.2%	48	41.6%	possibly_damaging(0.822)	deleterious(0.04)	deleterious(0.660)	HMMPfam_PPP5
ARHGAP35	2909	genome.wustl.edu	37	19	47422063	47422063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004491.4	+1	reviewed	p.R44H	1.000	145	0%	133	35.3%	5	20%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP35	2909	genome.wustl.edu	37	19	47422424	47422424	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004491.4	+1	reviewed	p.I164	0.465	140	0%	175	26.9%	1	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP35	2909	genome.wustl.edu	37	19	47424093	47424093	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004491.4	+1	reviewed	p.G721C	1.000	106	0.9%	116	26.7%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47492845	47492845	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004491.4	+1	reviewed	p.V1317M	1.000	134	0%	100	42%	13	61.5%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
DHX34	9704	genome.wustl.edu	37	19	47863315	47863315	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014681.5	+1	reviewed	p.V455I	0.987	121	0%	95	40%	14	42.8%	possibly_damaging(0.67)	deleterious(0.04)	deleterious(0.587)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNF114	163071	genome.wustl.edu	37	19	48789376	48789376	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_153608.1	+1	provisional	p.N165	0.000	61	0%	59	20.3%	4	0%	-	-	-	NULL
GRIN2D	2906	genome.wustl.edu	37	19	48925132	48925132	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000836.2	+1	reviewed	p.D728N	1.000	67	0%	34	47.1%	0	-	benign(0.218)	tolerated(0.21)	neutral(0.066)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
KCNJ14	3770	genome.wustl.edu	37	19	48967677	48967677	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013348.2	+1	reviewed	p.S318	0.097	155	0%	66	39.4%	5	20%	-	-	-	HMMPfam_IRK,superfamily_Ig_E-set
FUT2	2524	genome.wustl.edu	37	19	49206962	49206962	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000511.5	+1	reviewed	p.R250Q	0.956	108	0%	60	55%	7	42.8%	possibly_damaging(0.691)	deleterious(0.04)	deleterious(0.597)	HMMPfam_Glyco_transf_11
PLEKHA4	57664	genome.wustl.edu	37	19	49363622	49363622	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020904.2	-1	validated	p.A154V	0.839	34	0%	28	46.4%	1	0%	benign(0.107)	tolerated(1)	neutral(0.009)	HMMSmart_SM00233
CGB2	114336	genome.wustl.edu	37	19	49536324	49536324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033378.1	+1	reviewed	p.R113H	0.527	123	0%	69	31.9%	0	-	possibly_damaging(0.88)	deleterious(0)	deleterious(0.788)	HMMSmart_GHB,HMMPfam_Cys_knot,PatternScan_GLYCO_HORMONE_BETA_2,superfamily_SSF57501
SNORD33	26818	genome.wustl.edu	37	19	49993878	49993878	+	RNA	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NR_000020.1	+1	provisional	NULL	0.031	25	0%	19	36.8%	3	100%	-	-	-	-
MYH14	79784	genome.wustl.edu	37	19	50783320	50783320	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001077186.1	+1	reviewed	p.A1320	0.006	96	0%	60	38.3%	102	39.2%	-	-	-	HMMPfam_Myosin_tail_1
POLD1	5424	genome.wustl.edu	37	19	50906786	50906786	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002691.2	+1	validated	p.V392M	0.999	178	0%	117	30.8%	15	40%	benign(0.327)	deleterious(0.03)	neutral(0.467)	HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_RNaseH_fold
SHANK1	50944	genome.wustl.edu	37	19	51189537	51189537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016148.2	-1	validated	p.A845V	0.942	133	0%	66	10.6%	1	0%	benign(0.195)	deleterious(0.03)	neutral(0.383)	NULL
KLK2	3817	genome.wustl.edu	37	19	51380242	51380242	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005551.3	+1	validated	p.T203I	0.636	242	0%	185	51.4%	0	-	benign(0.205)	deleterious(0.04)	neutral(0.369)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
KLK4	9622	genome.wustl.edu	37	19	51410258	51410258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004917.3	-1	reviewed	p.V233M	0.000	96	0%	86	41.9%	0	-	possibly_damaging(0.677)	tolerated(0.06)	deleterious(0.564)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
KLK8	11202	genome.wustl.edu	37	19	51503939	51503939	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_144505.1	-1	reviewed	p.A36T	0.000	69	0%	36	41.7%	0	-	benign(0.036)	-	-	NULL
SIGLEC10	89790	genome.wustl.edu	37	19	51918270	51918270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033130.4	-1	validated	p.R475C	0.527	33	0%	15	26.7%	0	-	benign(0.07)	tolerated(0.13)	neutral(0.258)	superfamily_Immunoglobulin
ZNF534	147658	genome.wustl.edu	37	19	52941131	52941131	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001143939.1	+1	validated	p.S153G	0.017	140	0%	218	36.2%	0	-	possibly_damaging(0.663)	tolerated(0.35)	neutral(0.255)	superfamily_SSF57667
ZNF525	170958	genome.wustl.edu	37	19	53884068	53884068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000474037	+1	known	p.R79H	0.012	64	0%	179	40.2%	3	0%	possibly_damaging(0.598)	deleterious(0.05)	deleterious(0.552)	NULL
LILRA6	79168	genome.wustl.edu	37	19	54745947	54745947	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024318.2	-1	validated	p.A104T	0.000	484	0.2%	525	28.4%	1	0%	probably_damaging(0.999)	tolerated(0.52)	deleterious(0.499)	superfamily_SSF48726
LAIR1	3903	genome.wustl.edu	37	19	54868121	54868121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002287.3	-1	reviewed	p.R188C	0.000	176	0%	174	39.1%	8	0%	possibly_damaging(0.493)	deleterious(0)	deleterious(0.609)	NULL
KIR3DL2	3812	genome.wustl.edu	37	19	55363598	55363598	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006737.2	+1	reviewed	p.H72	0.000	201	0%	226	44.7%	0	-	-	-	-	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
PPP1R12C	54776	genome.wustl.edu	37	19	55606125	55606125	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017607.2	-1	provisional	p.S499*	0.000	107	0%	62	40.3%	28	21.4%	-	-	-	NULL
U2AF2	11338	genome.wustl.edu	37	19	56175097	56175097	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007279.2	+1	reviewed	p.S243	0.992	94	0%	62	22.6%	177	51.4%	-	-	-	superfamily_RNA-binding domain RBD
EPN1	29924	genome.wustl.edu	37	19	56200686	56200686	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001130072.1	+1	validated	p.D209	0.932	43	0%	21	33.3%	14	7.1%	-	-	-	HMMPfam_UIM,HMMSmart_UIM
NLRP4	147945	genome.wustl.edu	37	19	56369488	56369488	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_134444.4	+1	validated	p.P243	0.000	94	0%	56	35.7%	0	-	-	-	-	HMMPfam_NACHT
ZNF787	126208	genome.wustl.edu	37	19	56600191	56600191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000270459	-1	known	p.T117M	0.993	27	0%	19	47.4%	80	55%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_C2H2 and C2HC zinc fingers
ZNF583	147949	genome.wustl.edu	37	19	56934277	56934277	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152478.2	+1	validated	p.K84*	0.000	41	0%	62	51.6%	0	-	-	-	-	NULL
ZNF583	147949	genome.wustl.edu	37	19	56935167	56935167	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152478.2	+1	validated	p.Y380	0.008	166	0%	223	36.3%	1	100%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP28	140612	genome.wustl.edu	37	19	57066189	57066189	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020828.1	+1	provisional	p.G679S	1.000	156	0%	143	41.3%	3	100%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF71	58491	genome.wustl.edu	37	19	57133900	57133900	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021216.4	+1	validated	p.C415	0.996	82	0%	34	38.2%	4	25%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF419	79744	genome.wustl.edu	37	19	58002923	58002923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098491.1	+1	validated	p.R54C	0.001	240	0%	183	41.5%	3	66.6%	benign(0.008)	tolerated(0.2)	neutral(0.049)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF530	348327	genome.wustl.edu	37	19	58118416	58118416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020880.3	+1	validated	p.R508Q	0.000	130	0%	149	42.3%	5	60%	benign(0.246)	tolerated(0.68)	neutral(0.027)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF776	284309	genome.wustl.edu	37	19	58265198	58265198	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173632.3	+1	validated	p.G234*	0.002	49	0%	58	12.1%	2	50%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF606	80095	genome.wustl.edu	37	19	58489786	58489786	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025027.3	-1	validated	p.H754	0.993	184	0%	293	13.7%	6	16.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF274	10782	genome.wustl.edu	37	19	58718307	58718307	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000424679	+1	known	p.A159	0.000	59	0%	39	43.6%	5	40%	-	-	-	HMMPfam_SCAN,HMMSmart_SM00431
ZNF324	25799	genome.wustl.edu	37	19	58983056	58983056	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014347.1	+1	provisional	p.C399	0.533	27	0%	14	42.9%	2	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CHMP2A	27243	genome.wustl.edu	37	19	59063080	59063080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014453.2	-1	validated	p.A202V	0.998	46	0%	39	41%	274	45.9%	benign(0.264)	tolerated(0.16)	neutral(0.087)	NULL
RBCK1	10616	genome.wustl.edu	37	20	409217	409217	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031229.2	+1	reviewed	p.T431M	1.000	62	0%	24	16.7%	62	8%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
SRXN1	140809	genome.wustl.edu	37	20	629465	629465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080725.1	-1	provisional	p.A103T	0.996	110	0%	67	41.8%	6	50%	benign(0.081)	tolerated(0.08)	neutral(0.306)	HMMSmart_SM00470
SIRPD	128646	genome.wustl.edu	37	20	1532544	1532544	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178460.2	-1	validated	p.R72W	0.000	244	0%	286	35.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
SIRPG	55423	genome.wustl.edu	37	20	1629948	1629948	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_018556.3	-1	reviewed	p.P60	0.010	300	0%	330	40.3%	0	-	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
STK35	140901	genome.wustl.edu	37	20	2097362	2097362	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080836.3	+1	reviewed	p.M182V	1.000	252	0%	257	12.5%	2	0%	possibly_damaging(0.598)	deleterious(0)	deleterious(0.651)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CPXM1	56265	genome.wustl.edu	37	20	2775282	2775282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019609.4	-1	reviewed	p.R622C	1.000	66	0%	53	35.8%	22	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
FAM113A	64773	genome.wustl.edu	37	20	2820434	2820434	+	Splice_Site	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022760.3	-1	predicted	e1+1	1.000	81	0%	41	34.1%	3	66.6%	-	-	-	-
ADAM33	80332	genome.wustl.edu	37	20	3654720	3654720	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_025220.2	-1	reviewed	p.Y243	0.693	136	0%	79	49.4%	1	0%	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
SIGLEC1	6614	genome.wustl.edu	37	20	3677914	3677914	+	Missense_Mutation	SNP	C	C	T	rs148161998	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_023068.3	-1	reviewed	p.R733Q	0.006	106	0%	66	47%	4	0%	benign(0.031)	tolerated(0.7)	neutral(0.004)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
C20orf27	54976	genome.wustl.edu	37	20	3734842	3734842	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000405186	-1	known	p.G5	0.011	40	0%	15	46.7%	0	-	-	-	-	NULL
PLCB1	23236	genome.wustl.edu	37	20	8639183	8639183	+	Splice_Site	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015192.2	+1	reviewed	e9-2	0.998	79	0%	106	40.6%	0	-	-	-	-	-
PAX1	5075	genome.wustl.edu	37	20	21695332	21695332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006192.3	+1	validated	p.P499Q	0.000	31	0%	23	39.1%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
GGTLC1	92086	genome.wustl.edu	37	20	23966580	23966580	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178311.2	-1	reviewed	p.T112	0.993	119	0%	57	40.4%	13	0%	-	-	-	HMMPfam_G_glu_transpept
ENTPD6	955	genome.wustl.edu	37	20	25190494	25190494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001247.2	+1	reviewed	p.T129M	0.995	267	0%	278	30.6%	35	48.5%	probably_damaging(0.968)	tolerated(0.24)	neutral(0.447)	HMMPfam_GDA1_CD39
PYGB	5834	genome.wustl.edu	37	20	25255252	25255252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002862.3	+1	reviewed	p.R185C	1.000	52	0%	24	20.8%	33	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Phosphorylase,superfamily_SSF53756
ZNF337	26152	genome.wustl.edu	37	20	25657650	25657650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015655.2	-1	validated	p.R92W	0.000	119	0%	97	40.2%	9	22.2%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
POFUT1	23509	genome.wustl.edu	37	20	30818818	30818818	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015352.1	+1	reviewed	p.D311A	1.000	144	0%	95	28.4%	28	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_O-FucT
SUN5	140732	genome.wustl.edu	37	20	31592111	31592111	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080675.3	-1	validated	p.G12	0.000	73	0%	58	32.8%	0	-	-	-	-	NULL
MYH7B	57644	genome.wustl.edu	37	20	33567264	33567264	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020884.3	+1	reviewed	p.G97R	1.000	52	0%	22	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7B	57644	genome.wustl.edu	37	20	33570346	33570346	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020884.3	+1	reviewed	p.P246	0.990	47	0%	35	31.4%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CEP250	11190	genome.wustl.edu	37	20	34067203	34067203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007186.3	+1	reviewed	p.V748M	0.403	45	0%	40	40%	8	50%	benign(0.011)	tolerated(0.15)	neutral(0.241)	NULL
DLGAP4	22839	genome.wustl.edu	37	20	35128934	35128934	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014902.4	+1	reviewed	p.L808P	1.000	27	0%	17	29.4%	78	17.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GKAP
TGM2	7052	genome.wustl.edu	37	20	36766595	36766595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004613.2	-1	reviewed	p.R512H	0.998	141	0%	64	34.4%	19	15.7%	possibly_damaging(0.903)	tolerated(0.16)	neutral(0.417)	HMMPfam_Transglut_C,superfamily_Transglutaminase two C-terminal domains
FAM83D	81610	genome.wustl.edu	37	20	37580570	37580570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030919.2	+1	validated	p.A419T	0.656	62	1.6%	23	39.1%	18	27.7%	benign(0.048)	deleterious(0.04)	neutral(0.352)	NULL
LPIN3	64900	genome.wustl.edu	37	20	39981281	39981281	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022896.1	+1	validated	p.L467I	0.879	133	0.8%	120	40.8%	1	0%	benign(0.378)	tolerated(0.06)	neutral(0.443)	NULL
LOC100287031	100287031	genome.wustl.edu	37	20	42143816	42143816	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343705.1	-1	model	p.C32	0.000	43	0%	27	59.3%	0	-	-	-	-	NULL
L3MBTL1	26013	genome.wustl.edu	37	20	42168905	42168905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015478.5	+1	reviewed	p.A673V	0.997	92	0%	35	54.3%	1	100%	possibly_damaging(0.819)	tolerated(0.18)	neutral(0.365)	NULL
GDAP1L1	78997	genome.wustl.edu	37	20	42885867	42885867	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000445952	+1	known	p.G32R	1.000	35	0%	28	25%	0	-	-	-	-	HMMPfam_GST_N,superfamily_Thioredoxin-like
TTPAL	79183	genome.wustl.edu	37	20	43118137	43118137	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039199.1	+1	validated	p.D328	0.724	84	0%	44	54.5%	4	50%	-	-	-	NULL
UBE2C	11065	genome.wustl.edu	37	20	44444140	44444140	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181799.1	+1	reviewed	p.L110	0.000	73	0%	52	40.4%	1	0%	-	-	-	HMMSmart_SM00212,superfamily_UBC-like
PLTP	5360	genome.wustl.edu	37	20	44533712	44533712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006227.2	-1	reviewed	p.R251W	0.249	72	0%	38	39.5%	21	0%	possibly_damaging(0.768)	tolerated(0.12)	deleterious(0.545)	HMMPfam_LBP_BPI_CETP_C,superfamily_Bactericidal permeability-increasing protein BPI
EYA2	2139	genome.wustl.edu	37	20	45771717	45771717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005244.4	+1	reviewed	p.R303H	1.000	214	0%	193	39.9%	187	39.5%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	HMMPfam_Hydrolase
SULF2	55959	genome.wustl.edu	37	20	46294839	46294839	+	Missense_Mutation	SNP	T	T	C	rs184990645	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000371978	-1	known	p.T19A	1.000	269	0%	117	10.3%	38	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ZNFX1	57169	genome.wustl.edu	37	20	47865471	47865471	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021035.2	-1	validated	p.S1364T	1.000	76	0%	52	38.5%	20	75%	possibly_damaging(0.912)	tolerated(0.39)	neutral(0.380)	NULL
ZNFX1	57169	genome.wustl.edu	37	20	47869320	47869320	+	Silent	SNP	A	A	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021035.2	-1	validated	p.L1051	1.000	131	0%	93	44.1%	9	22.2%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
SNORD12B	100113393	genome.wustl.edu	37	20	47896922	47896922	+	RNA	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NR_003695.1	+1	provisional	NULL	1.000	263	0%	254	32.3%	2	100%	-	-	-	-
LOC100128598	100128598	genome.wustl.edu	37	20	49626579	49626579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001716142.1	+1	model	p.V489I	0.997	52	0%	20	55%	0	-	-	-	-	NULL
ATP9A	10079	genome.wustl.edu	37	20	50221454	50221454	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006045.1	-1	validated	p.A970V	1.000	36	0%	13	30.8%	25	44%	benign(0.043)	tolerated(0.1)	neutral(0.289)	NULL
ZFP64	55734	genome.wustl.edu	37	20	50701141	50701141	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_199427.2	-1	validated	p.S631	0.011	33	0%	25	28%	4	75%	-	-	-	NULL
GNAS	2778	genome.wustl.edu	37	20	57485819	57485819	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080425.2	+1	reviewed	p.R1017C	1.000	151	0%	82	36.6%	7504	34.1%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNF831	128611	genome.wustl.edu	37	20	57766659	57766659	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_178457.1	+1	provisional	p.T195	0.000	18	0.000	9	0.667	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
GATA5	140628	genome.wustl.edu	37	20	61048518	61048518	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080473.4	-1	reviewed	p.G214S	1.000	25	0%	20	50%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GATA,HMMSmart_ZnF_GATA,superfamily_SSF57716
KCNQ2	3785	genome.wustl.edu	37	20	62070998	62070998	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_172107.2	-1	reviewed	p.A294P	1.000	88	0%	41	36.6%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
PRIC285	85441	genome.wustl.edu	37	20	62192178	62192178	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001037335.2	-1	reviewed	p.D2417	0.011	78	0%	30	26.7%	24	29.1%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
PRPF6	24148	genome.wustl.edu	37	20	62654141	62654141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012469.3	+1	reviewed	p.R560Q	1.000	81	0%	37	27%	108	23.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_HAT,superfamily_SSF48452
GABPA	2551	genome.wustl.edu	37	21	27124342	27124342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002040.3	+1	validated	p.A117V	1.000	137	0%	215	13.5%	3	33.3%	benign(0)	tolerated(0.72)	neutral(0.002)	NULL
N6AMT1	29104	genome.wustl.edu	37	21	30248795	30248795	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013240.3	-1	reviewed	p.M186T	1.000	239	0%	285	40%	4	25%	possibly_damaging(0.851)	deleterious(0)	deleterious(0.772)	HMMPfam_MTS,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
KRTAP19-4	337971	genome.wustl.edu	37	21	31869296	31869296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_181610.1	-1	provisional	p.G45R	0.011	223	0%	183	40.4%	0	-	unknown(0)	-	-	NULL
TIAM1	7074	genome.wustl.edu	37	21	32639166	32639166	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003253.2	-1	validated	p.H41	1.000	64	0%	43	25.6%	3	33.3%	-	-	-	NULL
SETD4	54093	genome.wustl.edu	37	21	37417981	37417981	+	Missense_Mutation	SNP	C	C	T	rs145926295	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017438.3	-1	validated	p.V209M	0.999	32	0%	20	45%	28	57.1%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	HMMPfam_SET,superfamily_SET domain
TTC3	7267	genome.wustl.edu	37	21	38494133	38494133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001001894.1	+1	validated	p.C306Y	1.000	97	0%	205	38%	14	57.1%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_TPR_1,superfamily_SSF48452
BRWD1	54014	genome.wustl.edu	37	21	40608668	40608668	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000455867	-1	known	p.H541Y	0.996	191	0%	243	38.7%	1	0%	-	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41648061	41648061	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001389.3	-1	validated	p.G773	1.000	104	0%	108	38%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
FAM3B	54097	genome.wustl.edu	37	21	42718976	42718976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_058186.3	+1	validated	p.A145V	0.220	232	0%	241	18.7%	1	0%	benign(0.001)	tolerated(0.2)	neutral(0.049)	NULL
PDE9A	5152	genome.wustl.edu	37	21	44181017	44181017	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002606.2	+1	reviewed	p.T362M	1.000	65	0%	60	43.3%	20	25%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
LRRC3	81543	genome.wustl.edu	37	21	45876938	45876938	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_030891.3	+1	validated	p.S137	0.002	34	0%	12	41.7%	0	-	-	-	-	superfamily_SSF52058
KRTAP10-7	386675	genome.wustl.edu	37	21	46021557	46021557	+	Missense_Mutation	SNP	C	C	T	rs180786399	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000380102	+1	known	p.R346C	1.000	142	0%	59	40.7%	0	-	unknown(0)	tolerated(0.13)	-	HMMPfam_Keratin_B2
ITGB2	3689	genome.wustl.edu	37	21	46326847	46326847	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000211.3	-1	reviewed	p.T104M	0.000	71	0%	49	40.8%	12	8.3%	probably_damaging(0.988)	tolerated(0.09)	deleterious(0.734)	HMMPfam_Integrin_beta,HMMSmart_INB
POFUT2	23275	genome.wustl.edu	37	21	46702294	46702294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_133635.4	-1	validated	p.A203V	0.994	62	0%	36	41.7%	12	58.3%	benign(0.008)	tolerated(0.56)	neutral(0.006)	HMMPfam_O-FucT
MCM3AP	8888	genome.wustl.edu	37	21	47697505	47697505	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003906.3	-1	reviewed	p.T598	0.000	117	0%	64	29.7%	12	50%	-	-	-	NULL
DIP2A	23181	genome.wustl.edu	37	21	47987311	47987311	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015151.3	+1	reviewed	p.V1498L	1.000	85	0%	59	44.1%	21	47.6%	probably_damaging(0.999)	tolerated(0.11)	deleterious(0.762)	superfamily_Acetyl-CoA synthetase-like
IL17RA	23765	genome.wustl.edu	37	22	17583194	17583194	+	Splice_Site	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014339.4	+1	reviewed	e7+2	1.000	140	0%	121	43.8%	19	100%	-	-	-	-
PRODH	5625	genome.wustl.edu	37	22	18918537	18918537	+	Missense_Mutation	SNP	G	G	T	rs60404632		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_016335.3	-1	reviewed	p.L150M	1.000	77	0%	46	41.3%	1	100%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	superfamily_FAD-linked oxidoreductase
RIMBP3	85376	genome.wustl.edu	37	22	20458195	20458195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015672.1	-1	validated	p.A1036V	0.006	294	0%	156	11.5%	0	-	benign(0.328)	deleterious(0.01)	deleterious(0.509)	superfamily_Fibronectin type III
LZTR1	8216	genome.wustl.edu	37	22	21345975	21345975	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006767.3	+1	reviewed	p.R284C	1.000	37	0%	20	30%	9	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
LZTR1	8216	genome.wustl.edu	37	22	21346043	21346043	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006767.3	+1	reviewed	p.T306	0.005	33	0%	28	25%	17	41.1%	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
LOC100288305	100288305	genome.wustl.edu	37	22	24944944	24944944	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_002343772.1	+1	model	p.G47R	0.067	47	0%	16	25%	19	52.6%	-	-	-	NULL
SGSM1	129049	genome.wustl.edu	37	22	25243763	25243763	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039948.2	+1	validated	p.A101V	0.962	27	0%	12	41.7%	0	-	benign(0.004)	tolerated(0.27)	neutral(0.034)	HMMPfam_RUN
MYO18B	84700	genome.wustl.edu	37	22	26194050	26194050	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032608.5	+1	reviewed	p.A836V	0.965	51	0%	26	57.7%	0	-	probably_damaging(1)	tolerated(0.34)	deleterious(0.523)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CRYBB1	1414	genome.wustl.edu	37	22	27012128	27012128	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001887.3	-1	reviewed	p.A52	0.012	169	0%	60	26.7%	0	-	-	-	-	NULL
TTC28	23331	genome.wustl.edu	37	22	28394928	28394928	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145418.1	-1	validated	p.F1573	0.604	85	0%	37	51.4%	10	50%	-	-	-	NULL
KREMEN1	83999	genome.wustl.edu	37	22	29533398	29533398	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_032045.4	+1	reviewed	p.D234N	1.000	71	0%	39	41%	7	42.8%	possibly_damaging(0.952)	tolerated(0.08)	deleterious(0.696)	HMMPfam_CUB,HMMSmart_CUB,superfamily_CUB
RFPL1	5988	genome.wustl.edu	37	22	29834903	29834903	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021026.2	+1	validated	p.P41	0.162	216	0%	169	45.6%	0	-	-	-	-	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
GAL3ST1	9514	genome.wustl.edu	37	22	30951209	30951209	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004861.1	-1	reviewed	p.R335C	1.000	17	0%	12	75%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Gal-3-0_sulfotr
SMTN	6525	genome.wustl.edu	37	22	31500430	31500430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_134270.1	+1	reviewed	p.R934H	1.000	38	0%	27	48.1%	62	43.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LOC100133224	100133224	genome.wustl.edu	37	22	31552503	31552503	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	XM_001716151.1	-1	model	p.C188	0.988	56	0%	122	42.6%	1	0%	-	-	-	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins
FBXO7	25793	genome.wustl.edu	37	22	32894334	32894334	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012179.3	+1	reviewed	p.S462	0.812	97	0%	84	31%	128	51.5%	-	-	-	NULL
RBFOX2	23543	genome.wustl.edu	37	22	36161512	36161512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001082578.1	-1	reviewed	p.R259C	1.000	119	0%	200	30.5%	18	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF54928
RBFOX2	23543	genome.wustl.edu	37	22	36236240	36236240	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001031695.2	-1	reviewed	p.Q9R	1.000	112	0%	158	12%	3	0%	benign(0.014)	tolerated(0.25)	neutral(0.037)	NULL
APOL1	8542	genome.wustl.edu	37	22	36653179	36653179	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145343.2	+1	reviewed	p.A48V	0.000	151	0%	143	42%	23	39.1%	unknown(0)	tolerated(0.06)	-	NULL
EIF3D	8664	genome.wustl.edu	37	22	36907688	36907688	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003753.3	-1	reviewed	p.M499V	1.000	157	0.6%	109	35.8%	358	39.3%	benign(0.413)	deleterious(0.01)	deleterious(0.539)	HMMPfam_eIF-3_zeta
SSTR3	6753	genome.wustl.edu	37	22	37603480	37603480	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001051.2	-1	reviewed	p.A121	0.003	50	0%	27	37%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
DMC1	11144	genome.wustl.edu	37	22	38934571	38934571	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007068.2	-1	reviewed	p.H211	1.000	67	0%	96	40.6%	2	50%	-	-	-	HMMSmart_AAA,HMMPfam_Rad51,superfamily_SSF52540
SUN2	25777	genome.wustl.edu	37	22	39141702	39141702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015374.1	-1	validated	p.S267L	0.003	52	0%	32	15.6%	22	0%	benign(0.156)	tolerated(0.08)	neutral(0.314)	NULL
MGAT3	4248	genome.wustl.edu	37	22	39884801	39884801	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098270.1	+1	reviewed	p.A483	0.878	55	1.8%	29	44.8%	5	60%	-	-	-	HMMPfam_Glyco_transf_17
CACNA1I	8911	genome.wustl.edu	37	22	40066136	40066136	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021096.3	+1	reviewed	p.V1430M	1.000	450	0%	336	41.1%	0	-	possibly_damaging(0.893)	deleterious(0)	deleterious(0.796)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
DNAJB7	150353	genome.wustl.edu	37	22	41257994	41257994	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_145174.1	-1	provisional	p.V2A	1.000	91	0%	205	40.5%	0	-	possibly_damaging(0.922)	tolerated(0.32)	neutral(0.396)	HMMSmart_DnaJ,superfamily_DnaJ_N
L3MBTL2	83746	genome.wustl.edu	37	22	41625569	41625569	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_031488.4	+1	validated	p.T638	0.951	97	0%	87	36.8%	28	39.2%	-	-	-	NULL
ACO2	50	genome.wustl.edu	37	22	41903905	41903905	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098.2	+1	reviewed	p.R95H	1.000	46	0%	18	44.4%	93	39.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Aconitase,superfamily_Aconitase_N
TCF20	6942	genome.wustl.edu	37	22	42606436	42606436	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005650.1	-1	reviewed	p.A1626T	0.950	336	0.3%	394	37.6%	10	60%	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
BIK	638	genome.wustl.edu	37	22	43524622	43524622	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001197.3	+1	reviewed	p.P127	0.000	91	0%	76	34.2%	26	50%	-	-	-	NULL
TTLL12	23170	genome.wustl.edu	37	22	43575882	43575882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015140.3	-1	validated	p.T224M	1.000	28	0.000	9	0.667	21	23.8%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
SCUBE1	80274	genome.wustl.edu	37	22	43654225	43654225	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173050.2	-1	validated	p.E243K	1.000	87	0%	62	33.9%	1	0%	benign(0.224)	deleterious(0.02)	neutral(0.405)	superfamily_SSF57196
EFCAB6	64800	genome.wustl.edu	37	22	44063071	44063071	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022785.2	-1	validated	p.I632M	0.043	365	0%	562	14.6%	2	0%	probably_damaging(0.998)	tolerated(0.23)	deleterious(0.516)	superfamily_EF-hand
NUP50	10762	genome.wustl.edu	37	22	45579383	45579383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_007172.3	+1	reviewed	p.R396W	1.000	148	0%	207	44%	11	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ran_BP1,HMMSmart_SM00160,superfamily_PH domain-like
KIAA0930	23313	genome.wustl.edu	37	22	45601701	45601701	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015264.1	-1	validated	p.S108	1.000	41	0%	38	52.6%	26	23%	-	-	-	HMMPfam_DUF2045
FAM19A5	25817	genome.wustl.edu	37	22	49103590	49103590	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001082967.1	+1	validated	p.C108	0.661	84	0%	47	31.9%	17	100%	-	-	-	NULL
PANX2	56666	genome.wustl.edu	37	22	50615406	50615406	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_052839.3	+1	reviewed	p.R89C	1.000	39	0%	25	48%	8	37.5%	probably_damaging(0.999)	tolerated(0.19)	deleterious(0.540)	NULL
TUBGCP6	85378	genome.wustl.edu	37	22	50664611	50664611	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020461.3	-1	reviewed	p.L567	0.019	122	0%	89	42.7%	15	60%	-	-	-	HMMPfam_Spc97_Spc98
SBF1	6305	genome.wustl.edu	37	22	50905770	50905770	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_002972.2	-1	validated	p.S182	0.075	62	0%	30	46.7%	13	30.7%	-	-	-	HMMPfam_DENN,HMMSmart_SM00799
KLHDC7B	113730	genome.wustl.edu	37	22	50987954	50987954	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138433.3	+1	validated	p.Y453	0.920	21	0%	22	31.8%	3	0%	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
PPP2R3B	28227	genome.wustl.edu	37	X	306304	306304	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013239.4	-1	reviewed	p.T328M	0.998	158	0%	119	39.5%	17	23.5%	possibly_damaging(0.85)	deleterious(0.04)	deleterious(0.676)	superfamily_EF-hand
PPP2R3B	28227	genome.wustl.edu	37	X	306335	306335	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013239.4	-1	reviewed	p.V318I	1.000	168	0%	133	35.3%	23	69.5%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_EF-hand
ZBED1	9189	genome.wustl.edu	37	X	2408502	2408502	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004729.3	-1	reviewed	p.R87C	0.999	217	0%	161	36.6%	9	55.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
HDHD1	8226	genome.wustl.edu	37	X	6995418	6995418	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001135565.1	-1	reviewed	p.A141V	0.000	75	0%	50	36%	6	33.3%	benign(0)	tolerated(0.33)	neutral(0.024)	HMMPfam_Hydrolase,superfamily_HAD-like
KAL1	3730	genome.wustl.edu	37	X	8504916	8504916	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000216.2	-1	reviewed	p.R506Q	0.523	285	0%	296	35.5%	5	100%	benign(0.393)	tolerated(0.52)	neutral(0.135)	HMMSmart_FN3
FAM9A	171482	genome.wustl.edu	37	X	8763336	8763336	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_174951.3	-1	validated	p.A205V	0.125	255	0.4%	202	40.6%	0	-	unknown(0)	-	-	NULL
FAM9A	171482	genome.wustl.edu	37	X	8767124	8767124	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_174951.3	-1	validated	p.A35T	0.002	235	0%	141	44%	0	-	possibly_damaging(0.93)	deleterious(0)	deleterious(0.821)	NULL
GPR143	4935	genome.wustl.edu	37	X	9707712	9707712	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000447366	-1	known	p.R247W	0.840	106	0%	79	34.2%	11	100%	-	-	-	HMMPfam_Ocular_alb
SHROOM2	357	genome.wustl.edu	37	X	9907350	9907350	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001649.2	+1	reviewed	p.Q1419*	1.000	94	0%	44	47.7%	5	0%	-	-	-	HMMPfam_ASD2
TLR8	51311	genome.wustl.edu	37	X	12937667	12937667	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138636.4	+1	reviewed	p.I170V	0.000	51	0%	84	15.5%	0	-	benign(0.005)	tolerated(0.3)	neutral(0.029)	superfamily_SSF52047
ASB11	140456	genome.wustl.edu	37	X	15306084	15306084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080873.1	-1	reviewed	p.R256C	0.001	134	0%	104	32.7%	0	-	benign(0)	tolerated(0.24)	neutral(0.037)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
PIR	8544	genome.wustl.edu	37	X	15497927	15497927	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001018109.1	-1	reviewed	p.P38	0.850	146	0%	260	36.9%	28	100%	-	-	-	HMMPfam_Pirin,superfamily_RmlC_like_cupin
NHS	4810	genome.wustl.edu	37	X	17743974	17743974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_198270.2	+1	reviewed	p.R562H	0.275	84	0%	34	38.2%	3	0%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
MAP3K15	389840	genome.wustl.edu	37	X	19433334	19433334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000338883	-1	known	p.R494H	1.000	102	0%	142	47.2%	0	-	benign(0.008)	tolerated(0.58)	neutral(0.005)	NULL
MAP7D2	256714	genome.wustl.edu	37	X	20033417	20033417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152780.3	-1	validated	p.E517G	1.000	330	0%	316	43.4%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_MAP7
MAP7D2	256714	genome.wustl.edu	37	X	20043896	20043896	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152780.3	-1	validated	p.G353	0.000	220	0.5%	190	22.1%	0	-	-	-	-	NULL
FAM48B2	170067	genome.wustl.edu	37	X	24330195	24330195	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001136233.1	-1	provisional	p.Q413R	0.000	293	0%	198	29.8%	0	-	-	-	-	NULL
MAGEB6	158809	genome.wustl.edu	37	X	26212133	26212133	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_173523.2	+1	reviewed	p.D57G	0.000	124	0.8%	126	27%	0	-	benign(0)	tolerated(0.52)	neutral(0.009)	NULL
CXorf30	645090	genome.wustl.edu	37	X	36385108	36385108	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001098843.3	+1	validated	p.C463	0.002	238	0%	301	38.2%	4	75%	-	-	-	NULL
XK	7504	genome.wustl.edu	37	X	37545300	37545300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021083.2	+1	reviewed	p.R29H	0.671	30	0%	12	66.7%	7	0%	benign(0.183)	tolerated(0.32)	neutral(0.041)	HMMPfam_XK-related
BCOR	54880	genome.wustl.edu	37	X	39913588	39913588	+	Splice_Site	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001123385.1	-1	reviewed	e12-2	1.000	70	0%	70	12.9%	0	-	-	-	-	-
BCOR	54880	genome.wustl.edu	37	X	39933843	39933843	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001123385.1	-1	reviewed	p.Y252	1.000	50	0%	27	48.1%	8	0%	-	-	-	NULL
BCOR	54880	genome.wustl.edu	37	X	39934080	39934080	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001123385.1	-1	reviewed	p.S173	0.588	127	1.6%	114	45.6%	5	0%	-	-	-	NULL
MED14	9282	genome.wustl.edu	37	X	40556323	40556323	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004229.3	-1	reviewed	p.K535E	1.000	264	0%	454	37.2%	9	100%	benign(0.001)	tolerated(0.15)	neutral(0.241)	NULL
USP9X	8239	genome.wustl.edu	37	X	41073934	41073934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001039590.2	+1	reviewed	p.A1768V	1.000	142	0%	282	13.5%	19	15.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_UCH,superfamily_Cysteine proteinases
CHST7	56548	genome.wustl.edu	37	X	46433936	46433936	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_019886.2	+1	reviewed	p.A190	0.968	27	0.000	8	0.625	4	0%	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
RP2	6102	genome.wustl.edu	37	X	46737004	46737004	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006915.2	+1	reviewed	p.N316	0.015	391	0%	886	37.5%	8	75%	-	-	-	superfamily_NDK
RGN	9104	genome.wustl.edu	37	X	46949305	46949305	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004683.4	+1	reviewed	p.S159	0.978	148	0%	127	50.4%	0	-	-	-	-	HMMPfam_SGL,superfamily_Calcium-dependent phosphotriesterase
USP11	8237	genome.wustl.edu	37	X	47100807	47100807	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004651.3	+1	reviewed	p.A369	0.013	101	0%	63	12.7%	24	4.1%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
PORCN	64840	genome.wustl.edu	37	X	48372702	48372702	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_203475.1	+1	reviewed	p.T265M	0.999	106	0%	87	37.9%	10	0%	probably_damaging(0.965)	deleterious(0.03)	deleterious(0.771)	HMMPfam_MBOAT
USP27X	389856	genome.wustl.edu	37	X	49645861	49645861	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001145073.1	+1	provisional	p.A317	0.993	138	0%	149	35.6%	3	0%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
SHROOM4	57477	genome.wustl.edu	37	X	50377833	50377833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020717.3	-1	reviewed	p.E414K	1.000	82	0%	54	51.9%	0	-	probably_damaging(0.971)	deleterious(0.04)	deleterious(0.762)	NULL
SMC1A	8243	genome.wustl.edu	37	X	53430550	53430550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_006306.2	-1	reviewed	p.R790W	1.000	474	0%	432	40.3%	23	39.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SMC_N,superfamily_SSF52540
FGD1	2245	genome.wustl.edu	37	X	54482182	54482182	+	Silent	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004463.2	-1	reviewed	p.L626	1.000	171	0%	108	38.9%	7	100%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
FAM123B	139285	genome.wustl.edu	37	X	63412635	63412635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152424.3	-1	reviewed	p.R178C	0.995	91	0%	48	35.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_WTX
IGBP1	3476	genome.wustl.edu	37	X	69368658	69368658	+	Silent	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001551.2	+1	reviewed	p.P242	1.000	101	0%	133	24.1%	53	0%	-	-	-	HMMPfam_TAP42
TAF1	6872	genome.wustl.edu	37	X	70608222	70608222	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004606.3	+1	reviewed	p.R875C	1.000	106	0%	130	37.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73961905	73961905	+	Silent	SNP	A	A	G	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001008537.2	-1	validated	p.S829	0.977	153	0%	144	38.9%	1	0%	-	-	-	NULL
ATP7A	538	genome.wustl.edu	37	X	77254125	77254125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000052.4	+1	reviewed	p.G496D	1.000	133	0%	168	41.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMA,superfamily_HMA heavy metal-associated domain,PatternScan_HMA_1
POU3F4	5456	genome.wustl.edu	37	X	82764003	82764003	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000307.3	+1	reviewed	p.G224V	1.000	51	0%	33	36.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pou,HMMSmart_POU,superfamily_Lambda_like_DNA
RPS6KA6	27330	genome.wustl.edu	37	X	83319304	83319304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_014496.4	-1	reviewed	p.R740Q	1.000	185	0%	211	47.4%	0	-	benign(0.222)	tolerated(0.63)	neutral(0.025)	NULL
ZNF711	7552	genome.wustl.edu	37	X	84526279	84526279	+	Silent	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021998.4	+1	reviewed	p.L577	1.000	117	0%	108	42.6%	1	0%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NAP1L3	4675	genome.wustl.edu	37	X	92927569	92927569	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_004538.4	-1	reviewed	p.T245	0.004	182	0%	390	36.9%	0	-	-	-	-	HMMPfam_NAP
RPA4	29935	genome.wustl.edu	37	X	96139732	96139732	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_013347.4	+1	reviewed	p.E141D	0.000	143	0%	150	35.3%	0	-	benign(0.177)	deleterious(0.01)	neutral(0.422)	HMMPfam_tRNA_anti,superfamily_Nucleic_acid_OB
PCDH19	57526	genome.wustl.edu	37	X	99661886	99661886	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105243.1	-1	reviewed	p.N570	0.967	199	0.5%	106	47.2%	6	0%	-	-	-	superfamily_Cadherin
PCDH19	57526	genome.wustl.edu	37	X	99662368	99662368	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001105243.1	-1	reviewed	p.R410W	0.368	159	0%	104	38.5%	2	100%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
TSPAN6	7105	genome.wustl.edu	37	X	99887531	99887531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003270.2	-1	reviewed	p.S207L	1.000	122	0%	197	42.1%	147	88.4%	possibly_damaging(0.795)	deleterious(0.02)	deleterious(0.681)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
NXF3	56000	genome.wustl.edu	37	X	102339643	102339643	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_022052.1	-1	reviewed	p.Y66C	0.968	137	0%	145	15.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
RAB40A	142684	genome.wustl.edu	37	X	102755443	102755443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_080879.2	-1	reviewed	p.R81H	1.000	211	0%	140	33.6%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
TBC1D8B	54885	genome.wustl.edu	37	X	106083996	106083996	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_017752.2	+1	validated	p.R534H	1.000	127	0%	95	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
RGAG1	57529	genome.wustl.edu	37	X	109693940	109693940	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_020769.2	+1	validated	p.M32T	0.001	128	0%	129	46.5%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
AMOT	154796	genome.wustl.edu	37	X	112022635	112022635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001113490.1	-1	reviewed	p.A916V	0.966	103	0%	38	65.8%	2	0%	unknown(0)	deleterious(0.03)	-	NULL
KLHL13	90293	genome.wustl.edu	37	X	117043861	117043861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033495.3	-1	reviewed	p.L257F	1.000	54	0%	48	27.1%	14	0%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_BACK
KLHL13	90293	genome.wustl.edu	37	X	117054291	117054291	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_033495.3	-1	reviewed	p.T95A	0.997	175	0%	124	29.8%	17	0%	benign(0.269)	tolerated(0.06)	neutral(0.351)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
SEPT6	23157	genome.wustl.edu	37	X	118809625	118809625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_015129.5	-1	reviewed	p.G13C	1.000	63	0%	37	37.8%	3	0%	benign(0.247)	tolerated(0.05)	neutral(0.370)	superfamily_P-loop containing nucleoside triphosphate hydrolases
GRIA3	2892	genome.wustl.edu	37	X	122598815	122598815	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	ENST00000264357	+1	known	p.R726*	1.000	92	1.1%	78	39.7%	0	-	-	-	-	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II
SMARCA1	6594	genome.wustl.edu	37	X	128657270	128657270	+	Silent	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_003069.3	-1	reviewed	p.D26	0.981	98	0%	103	36.9%	2	0%	-	-	-	NULL
BCORL1	63035	genome.wustl.edu	37	X	129171432	129171432	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_021946.3	+1	reviewed	p.R1466W	0.993	72	0%	41	12.2%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ZNF449	203523	genome.wustl.edu	37	X	134494444	134494444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_152695.5	+1	reviewed	p.R334W	0.005	63	0%	74	48.6%	1	100%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MAP7D3	79649	genome.wustl.edu	37	X	135313107	135313107	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_024597.3	-1	reviewed	p.Q478*	0.001	193	0%	217	40.6%	1	0%	-	-	-	NULL
BRS3	680	genome.wustl.edu	37	X	135572636	135572636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001727.1	+1	validated	p.R260H	0.996	51	0%	62	33.9%	0	-	benign(0.085)	deleterious(0.01)	neutral(0.412)	HMMPfam_7tm_1,superfamily_SSF81321
MAGEC3	139081	genome.wustl.edu	37	X	140953312	140953312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_138702.1	+1	reviewed	p.R60M	0.000	276	0%	263	30.8%	0	-	unknown(0)	-	-	NULL
MAGEC1	9947	genome.wustl.edu	37	X	140995710	140995710	+	Silent	SNP	G	G	A	rs191655529	by1000genomes	TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005462.4	+1	reviewed	p.S840	0.017	199	0%	204	45.1%	0	-	-	-	-	NULL
MAGEA6	4105	genome.wustl.edu	37	X	151869696	151869696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005363.2	+1	reviewed	p.P129L	0.001	286	0%	257	43.6%	0	-	benign(0.092)	tolerated(1)	neutral(0.007)	HMMPfam_MAGE
PLXNB3	5365	genome.wustl.edu	37	X	153037412	153037412	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_005393.2	+1	reviewed	p.V871M	0.876	45	0%	19	36.8%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_TIG,HMMSmart_IPT,superfamily_Ig_E-set
L1CAM	3897	genome.wustl.edu	37	X	153132122	153132122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_000425.3	-1	reviewed	p.G805S	1.000	83	0%	48	35.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Fibronectin type III
ARHGAP4	393	genome.wustl.edu	37	X	153175478	153175478	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001666.4	-1	reviewed	p.A740T	0.000	55	1.8%	32	37.5%	10	0%	benign(0)	tolerated(1)	-	superfamily_SH3
OPN1MW2	728458	genome.wustl.edu	37	X	153490518	153490518	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001048181.2	+1	reviewed	p.R85H	0.999	104	0%	57	33.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
TKTL1	8277	genome.wustl.edu	37	X	153556272	153556272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_012253.3	+1	validated	p.R529Q	0.056	198	0%	203	40.4%	0	-	possibly_damaging(0.64)	tolerated(0.16)	neutral(0.283)	HMMPfam_Transketolase_C,superfamily_TK C-terminal domain-like
FLNA	2316	genome.wustl.edu	37	X	153593246	153593246	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001110556.1	-1	reviewed	p.V591I	0.999	72	0%	22	45.5%	35	94.2%	benign(0.356)	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
SLC10A3	8273	genome.wustl.edu	37	X	153716640	153716640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_001142392.1	-1	reviewed	p.E214K	0.987	44	0%	18	55.6%	39	0%	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_SBF
FUNDC2	65991	genome.wustl.edu	37	X	154255274	154255274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A5-A0VP-01A-21D-A10B-09	TCGA-A5-A0VP-10A-01D-A10B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7f64eba0-afa7-4612-9db2-edafa21b5564	b91ef015-ee09-4caa-9177-519a83c24230	NM_023934.3	+1	validated	p.A21T	0.000	20	0%	13	30.8%	16	0%	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
