| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/BLCA/2840910/0.GDAC_clinicalDataMerger.Finished/BLCA.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_15/stage3_params_clin_blca.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | BLCA |
| Execution Times: | |
| Submitted: | 20:21:47 31-03-13 |
| Completed: | |
| Elapsed: | 01 hrs 12 mins 18 secs |
step 1. GDAC_clinicalDataPicker [id: 354894] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/BLCA/2840910/0.GDAC_clinicalDataMerger.Finished/BLCA.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2013_03_15/stage3_params_clin_blca.tsv |
| nodeColumn | 1 |
| outPrefix | BLCA |
| Output Files: | |
| .lsf.out | |
| BLCA.clin.merged.picked.txt | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 20:21:47 31-03-13 |
| Completed: | 20:52:49 31-03-13 |
| Elapsed: | 00 hrs 31 mins 01 secs |
step 2. GDAC_clinicalDataPickerReport [id: 354895] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | BLCA.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 20:21:47 31-03-13 |
| Completed: | 21:34:04 31-03-13 |
| Elapsed: | 01 hrs 12 mins 16 secs |